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Domain assignment for YNL148C from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

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Strong hits

Sequence:  YNL148C
Domain Number 1 Region: 106-231
Classification Level Classification E-value
Superfamily Cap-Gly domain 1.83e-22
Family Cap-Gly domain 0.00096
Further Details:      
 
Domain Number 2 Region: 1-93
Classification Level Classification E-value
Superfamily Ubiquitin-like 0.0000000517
Family Ubiquitin-related 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
microtubule 1.891 54.27
spindle 1.815 33.38
cilium 1.675 31.2
ciliary part 1.819 31.2
endoplasmic reticulum subcompartment 1.59 20.04
nuclear outer membrane-endoplasmic reticulum membrane network 1.527 20.04
cytoplasmic vesicle part 1.417 16.99
chromosomal region 1.996 15.23
cytosol 1.295 15.13
midbody 2.182 14.1

Protein sequence

External link(s) Locus: YNL148C   Protein: S000005092
Sequence length 254
Comment ALF1 SGDID:S000005092, Chr XIV from 350673-349909, reverse complement, Verified ORF, "Alpha-tubulin folding protein, similar to mammalian cofactor B; Alf1p-GFP localizes to cytoplasmic microtubules; required for the folding of alpha-tubulin and may play an additional role in microtubule maintenance"
Sequence
MVRVVIESELVRTEKELPNSLKLRQFKDRLYHVTGVEPEDMEIVVKRQYDNKEIYSTKKG
GAYSNEDEDANFLKGEEELIVVVTDSNAQSISNQLATQAEGIPSMEVISEEDYLRRDQSV
LRWKMAHGYGRFNAAQQSQRAALAKQDEAYAREQLTAAIGRHCRVTVDGSAPREAILRYV
GPLPLDVMGTWCGVEFPEAAGKNDGRINGVTLFGPVAPGHGSFVRPRAVEILSKDEESAE
VEDVHDDVESDDEI
Download sequence
Identical sequences A0A0L8VIT0 B3LP04 C7GXU9 E7Q8D8 E7QJW0 N1P498 P53904
YNL148C YNL148c YNL148C YNL148C YNL148C SCRT_03283 YNL148C YNL148C YNL148C 4932.YNL148C YNL148C YNL148C YNL148C YNL148C YNL148C

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