SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for YOR180C from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

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Strong hits

Sequence:  YOR180C
Domain Number 1 Region: 3-259
Classification Level Classification E-value
Superfamily ClpP/crotonase 2.37e-36
Family Crotonase-like 6.79e-07
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
chloroplast part 1.896 20.11
plastid stroma 2.024 20.11
microbody 1.955 18.2
mitochondrial matrix 1.716 7.01
external encapsulating structure 1.632 5.11
lipid particle 1.519 4.18
plastid 1.6 3.67

Protein sequence

External link(s) Locus: YOR180C   Protein: S000005706
Sequence length 271
Comment DCI1 SGDID:S000005706, Chr XV from 675168-674353, reverse complement, Verified ORF, "Peroxisomal delta(3,5)-delta(2,4)-dienoyl-CoA isomerase, involved in fatty acid metabolism, contains peroxisome targeting signals at amino and carboxy termini"
Sequence
MSSRVCYHINGPFFIIKLIDPKHLNSLTFEDFVYIALLLHKANDIDSVLFTVLQSSGKYF
SSGGKFSAVNKLNDGDVTSEVEKVSKLVSAISSPNIFVANAFAIHKKVLVCCLNGPAIGL
SASLVALCDIVYSQNDSVFLLFPFSNLGFVAEVGTSVTLTQKLGINSANEHMIFSTPVLF
KELIGTIITKNYQLTNTETFNEKVLQDIKQNLEGLYPKSVLGMKELLHSEMKQKLIKAQA
METNGTLPFWASGEPFKRFKQLQEGNRRHKL
Download sequence
Identical sequences C7GLR3 C8ZGU1 G2WN53 N1NX35 Q08558 W7PW24 W7QV61
YOR180C 4932.YOR180C YOR180C YOR180C YOR180C YOR180C YOR180C YOR180C YOR180C YOR180C YOR180C YOR180C YOR180C

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