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Domain assignment for YOR269W from Saccharomyces cerevisiae SGD

Domain architecture

Domain assignment details

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Strong hits

Sequence:  YOR269W
Domain Number 1 Region: 142-489
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.3e-50
Family WD40-repeat 0.0000223
Further Details:      
Domain Number 2 Region: 10-45,73-109
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 3.4e-18
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.003
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
regulation of organ morphogenesis 1.688 29.77
kidney development 1.512 26.59
rRNA metabolic process 2.096 23.81
neural precursor cell proliferation 2.191 23.34
cilium assembly 1.371 22.68
RNA processing 1.496 18.18
microtubule-based movement 2.007 16.81
telomere organization 2.228 16.63
autophagy 2.133 16.23
microtubule-based process 1.533 14.77
Cellular Component IC (bits) H-Score
cullin-RING ubiquitin ligase complex 2.091 51.78
transferase complex 1.334 36.03
methyltransferase complex 2.1 21.1
cilium 1.616 18.76
nuclear transcription factor complex 1.972 13.26
membrane coat 2.031 10.66
vesicle membrane 1.602 9.39
cytoplasmic vesicle part 1.377 9.39
ciliary part 1.785 9.39
DNA-directed RNA polymerase II, holoenzyme 1.966 8.78

Protein sequence

External link(s) Locus: YOR269W   Protein: S000005795
Sequence length 494
Comment PAC1 SGDID:S000005795, Chr XV from 826384-827868, Verified ORF, "Protein involved in nuclear migration, part of the dynein/dynactin pathway; targets dynein to microtubule tips, which is necessary for sliding of microtubules along bud cortex; synthetic lethal with bni1; homolog of human LIS1"
Download sequence
Identical sequences A6ZPA6 N1NYT2 P39946
YOR269W tr|A6ZPA6|A6ZPA6_YEAS7 YOR269W 4932.YOR269W YOR269W YOR269W YOR269W

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