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Domain assignment for YPL220W from Saccharomyces cerevisiae SGD

Domain architecture

Domain assignment details

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Strong hits

Sequence:  YPL220W
Domain Number 1 Region: 12-217
Classification Level Classification E-value
Superfamily Ribosomal protein L1 2.49e-60
Family Ribosomal protein L1 0.00013
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
regulation of cellular response to stress 1.422 28.68
ribosome biogenesis 1.853 13.22
ribonucleoprotein complex biogenesis 1.7 11.26
translation 1.513 10.28
ribonucleoprotein complex assembly 1.921 4.14
Cellular Component IC (bits) H-Score
ribosomal subunit 1.981 14.49
mitochondrial matrix 1.61 12.09
mitochondrial protein complex 1.535 12.09
organellar ribosome 2.106 12.09
intracellular ribonucleoprotein complex 1.366 10.62
cytosol 1.294 10.48
nucleolus 1.731 5.19
cytosolic ribosome 2.234 4.63
Molecular Function IC (bits) H-Score
structural constituent of ribosome 1.943 31.93

Protein sequence

External link(s) Locus: YPL220W   Protein: S000006141
Sequence length 217
Comment RPL1A SGDID:S000006141, Chr XVI from 135789-136442, Verified ORF, "N-terminally acetylated protein component of the large (60S) ribosomal subunit, nearly identical to Rpl1Bp and has similarity to E. coli L1 and rat L10a ribosomal proteins; rpl1a rpl1b double null mutation is lethal"
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Identical sequences A0A0L8VQT8 A6ZU48 B3LHJ3 B5VIJ6 C7GN47 C8Z8B5 E7KCE2 E7KNB3 E7LU91 E7NHJ3 E7Q3R2 E7QEL3 G2WNW5 H0GPB5 N1P598 P0CX43 P0CX44
YGL135W YPL220W YPL220W YGL135W YPL220W YGL135W YPL220W NP_011380.3.97178 NP_015104.1.97178 YGL135W YPL220W 1s1iA ORFP:21446 ORFP:8073 YGL135W YPL220W YGL135W YPL220W YPL220W SCRT_01129 SCRT_02279 YGL135W YPL220W YGL135W YPL220W YGL135W YPL220W YGL135W YPL220W YGL135W YPL220W YGL135W YPL220W YGL135W YPL220W YGL135W YPL220W YPL220W YGL135W YPL220W 4932.YGL135W 4932.YPL220W YGL135W YPL220W 3j6x.L1 3j6y.L1 3j77.L1 3j78.L1 4v4b.BA 4v6i.BA 4v7f.A 4v7r.BA 4v7r.DA 4v91.t 5fl8.I 5jcs.I 5juo.E 5jup.E 5jus.E 5jut.E 5juu.E tr|A6ZU48|A6ZU48_YEAS7

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