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Domain assignment for YPR036W from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

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Strong hits

Sequence:  YPR036W
Domain Number 1 Region: 3-478
Classification Level Classification E-value
Superfamily ARM repeat 2.24e-138
Family Regulatory subunit H of the V-type ATPase 0.0000000000000296
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
transferase complex 1.369 31.58
membrane coat 2.044 26.91
organelle envelope 1.405 21.18
cytosol 1.295 15.81
nucleoplasm part 1.369 10.12
methyltransferase complex 2.143 10.12
coated vesicle membrane 2.075 9.81
transport vesicle membrane 2.03 9.64
clathrin-coated vesicle 1.989 9.64
side of membrane 1.633 8.85
Biological Process IC (bits) H-Score
nucleocytoplasmic transport 1.987 31.52
peptidyl-amino acid modification 1.432 22.31
peptidyl-lysine modification 1.895 22.31
cell cycle process 1.35 21.42
protein import 2.058 20.3
gliogenesis 1.492 18.6
nuclear division 1.865 17.9
microtubule-based process 1.532 15.82
regulation of cell adhesion 1.406 14.67
regulation of cell activation 1.625 14.67

Protein sequence

External link(s) Locus: YPR036W   Protein: S000006240
Sequence length 478
Comment VMA13 SGDID:S000006240, Chr XVI from 643833-645269, Verified ORF, "Subunit H of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase), an electrogenic proton pump found throughout the endomembrane system; serves as an activator or a structural stabilizer of the V-ATPase"
Sequence
MGATKILMDSTHFNEIRSIIRSRSVAWDALARSEELSEIDASTAKALESILVKKNIGDGL
SSSNNAHSGFKVNGKTLIPLIHLLSTSDNEDCKKSVQNLIAELLSSDKYGDDTVKFFQED
PKQLEQLFDVSLKGDFQTVLISGFNVVSLLVQNGLHNVKLVEKLLKNNNLINILQNIEQM
DTCYVCIRLLQELAVIPEYRDVIWLHEKKFMPTLFKILQRATDSQLATRIVATNSNHLGI
QLQYHSLLLIWLLTFNPVFANELVQKYLSDFLDLLKLVKITIKEKVSRLCISIILQCCST
RVKQHKKVIKQLLLLGNALPTVQSLSERKYSDEELRQDISNLKEILENEYQELTSFDEYV
AELDSKLLCWSPPHVDNGFWSDNIDEFKKDNYKIFRQLIELLQAKVRNGDVNAKQEKIII
QVALNDITHVVELLPESIDVLDKTGGKADIMELLNHSDSRVKYEALKATQAIIGYTFK
Download sequence
Identical sequences A0A0L8VG25 B3LL97 C7GQA2 E7KJH9 N1NWA0 P41807
4932.YPR036W YPR036W YPR036W YPR036W 3j9t.P 3j9u.P 3j9v.P 5bw9.H 5bw9.h 5d80.H 5d80.h 5vox.P 5voy.P 5voz.P YPR036W YPR036W YPR036W SCRT_02526 YPR036W YPR036W

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