SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for YPR036W from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

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Strong hits

Sequence:  YPR036W
Domain Number 1 Region: 3-478
Classification Level Classification E-value
Superfamily ARM repeat 2.24e-138
Family Regulatory subunit H of the V-type ATPase 2.96e-14
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
membrane coat 2.107 28.64
trans-Golgi network 1.798 19.21
cytosol 1.308 13.41
mitochondrial envelope 1.579 11.79
mitochondrial membrane part 1.918 11.79
extrinsic to plasma membrane 1.993 10.49
adherens junction 1.371 9.59
cell-cell adherens junction 1.823 9.59
nucleoplasm part 1.418 9.52
methyltransferase complex 2.219 9.52

Protein sequence

External link(s) Locus: YPR036W   Protein: S000006240
Sequence length 478
Comment VMA13 SGDID:S000006240, Chr XVI from 643833-645269, Verified ORF, "Subunit H of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase), an electrogenic proton pump found throughout the endomembrane system; serves as an activator or a structural stabilizer of the V-ATPase"
Sequence
MGATKILMDSTHFNEIRSIIRSRSVAWDALARSEELSEIDASTAKALESILVKKNIGDGL
SSSNNAHSGFKVNGKTLIPLIHLLSTSDNEDCKKSVQNLIAELLSSDKYGDDTVKFFQED
PKQLEQLFDVSLKGDFQTVLISGFNVVSLLVQNGLHNVKLVEKLLKNNNLINILQNIEQM
DTCYVCIRLLQELAVIPEYRDVIWLHEKKFMPTLFKILQRATDSQLATRIVATNSNHLGI
QLQYHSLLLIWLLTFNPVFANELVQKYLSDFLDLLKLVKITIKEKVSRLCISIILQCCST
RVKQHKKVIKQLLLLGNALPTVQSLSERKYSDEELRQDISNLKEILENEYQELTSFDEYV
AELDSKLLCWSPPHVDNGFWSDNIDEFKKDNYKIFRQLIELLQAKVRNGDVNAKQEKIII
QVALNDITHVVELLPESIDVLDKTGGKADIMELLNHSDSRVKYEALKATQAIIGYTFK
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Identical sequences B3LL97 C7GQA2 E7KJH9 N1NWA0 P41807 W7P8V1 W7QU75
YPR036W 4932.YPR036W YPR036W YPR036W SCRT_02526 YPR036W YPR036W YPR036W YPR036W YPR036W

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