SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for YPR036W from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  YPR036W
Domain Number 1 Region: 3-478
Classification Level Classification E-value
Superfamily ARM repeat 2.24e-138
Family Regulatory subunit H of the V-type ATPase 0.0000000000000296
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
protein targeting 1.508 26.95
protein localization to organelle 1.46 26.95
protein import into nucleus 2.015 26.95
lipid biosynthetic process 1.45 24.21
cell division 1.424 19.32
mitotic cell cycle process 1.491 19.06
mitotic nuclear division 2.144 19.06
epithelial cell development 1.399 18.05
blood vessel morphogenesis 1.414 18.05
endothelium development 2.034 18.05
Cellular Component IC (bits) H-Score
membrane coat 2.107 29.29
transferase complex 1.423 23.98
trans-Golgi network 1.793 19.11
cytosol 1.301 13.3
side of membrane 1.701 12.74
extrinsic component of plasma membrane 1.992 12.34
chromosomal part 1.477 11.08
endocytic vesicle 1.433 10.75
clathrin-coated vesicle 2.107 10.75
adherens junction 1.365 9.56

Protein sequence

External link(s) Locus: YPR036W   Protein: S000006240
Sequence length 478
Comment VMA13 SGDID:S000006240, Chr XVI from 643833-645269, Verified ORF, "Subunit H of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase), an electrogenic proton pump found throughout the endomembrane system; serves as an activator or a structural stabilizer of the V-ATPase"
Sequence
MGATKILMDSTHFNEIRSIIRSRSVAWDALARSEELSEIDASTAKALESILVKKNIGDGL
SSSNNAHSGFKVNGKTLIPLIHLLSTSDNEDCKKSVQNLIAELLSSDKYGDDTVKFFQED
PKQLEQLFDVSLKGDFQTVLISGFNVVSLLVQNGLHNVKLVEKLLKNNNLINILQNIEQM
DTCYVCIRLLQELAVIPEYRDVIWLHEKKFMPTLFKILQRATDSQLATRIVATNSNHLGI
QLQYHSLLLIWLLTFNPVFANELVQKYLSDFLDLLKLVKITIKEKVSRLCISIILQCCST
RVKQHKKVIKQLLLLGNALPTVQSLSERKYSDEELRQDISNLKEILENEYQELTSFDEYV
AELDSKLLCWSPPHVDNGFWSDNIDEFKKDNYKIFRQLIELLQAKVRNGDVNAKQEKIII
QVALNDITHVVELLPESIDVLDKTGGKADIMELLNHSDSRVKYEALKATQAIIGYTFK
Download sequence
Identical sequences B3LL97 C7GQA2 E7KJH9 N1NWA0 P41807 W7P8V1 W7QU75
YPR036W YPR036W SCRT_02526 4932.YPR036W YPR036W YPR036W YPR036W YPR036W YPR036W YPR036W

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]