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Domain assignment for YPR188C from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

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Strong hits

Sequence:  YPR188C
Domain Number 1 Region: 12-144
Classification Level Classification E-value
Superfamily EF-hand 4.7e-21
Family Calmodulin-like 0.0047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
cell-cell junction 1.43 58.2
sarcolemma 1.605 50.17
actomyosin 2.137 46.09
actin filament bundle 1.821 43.79
lateral plasma membrane 2.036 38.86
actin cytoskeleton 1.39 38.14
cortical actin cytoskeleton 1.909 37.48
occluding junction 2.062 32.01
cell leading edge 1.401 30.52
cell-substrate junction 1.489 30.34

Protein sequence

External link(s) Locus: YPR188C   Protein: S000006392
Sequence length 163
Comment MLC2 SGDID:S000006392, Chr XVI from 912475-911984, reverse complement, Verified ORF, "Regulatory light chain for the type II myosin, Myo1p; binds to an IQ motif of Myo1p, localization to the bud neck depends on Myo1p; involved in the disassembly of the Myo1p ring"
Sequence
MDHSESLTFNQLTQDYINKLKDAFQMLDEDEDGLISRGDLTKIYATLGKTLTDEEWSKMV
PDNDTSTAEVGEEGVSFPIFLSIMGKNLSQFPEREELEESLKAIGRGHDLNVPLNEVIDS
LKEAGFENPEEEFAKLFKLFTTNQQATEERTFRGKLFLDSITD
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Identical sequences B3LKE7 C7GP69 C8ZJL7 E7KJ14 E7KVR3 E7QM28 G2WPZ9 H0GQ88 Q06580 W7PV40 W7QUK6
YPR188C YPR188C SCRT_02661 YPR188C YPR188C YPR188C YPR188C YPR188C YPR188C YPR188C YPR188C YPR188C YPR188C YPR188C YPR188C YPR188C YPR188C YPR188C YPR188C 4932.YPR188C YPR188C

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