SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for YPR188C from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

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Strong hits

Sequence:  YPR188C
Domain Number 1 Region: 12-144
Classification Level Classification E-value
Superfamily EF-hand 4.7e-21
Family Calmodulin-like 0.0047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
sarcolemma 1.922 25.67
microtubule cytoskeleton 1.341 24.1
spindle 1.789 24.1
organelle inner membrane 1.669 16.91
cell leading edge 1.449 14.97
fusome 2.197 12.12
nuclear outer membrane-endoplasmic reticulum membrane network 1.557 12.06
endoplasmic reticulum part 1.431 12.06
adherens junction 1.365 11.22
endosome 1.323 10.39

Protein sequence

External link(s) Locus: YPR188C   Protein: S000006392
Sequence length 163
Comment MLC2 SGDID:S000006392, Chr XVI from 912475-911984, reverse complement, Verified ORF, "Regulatory light chain for the type II myosin, Myo1p; binds to an IQ motif of Myo1p, localization to the bud neck depends on Myo1p; involved in the disassembly of the Myo1p ring"
Sequence
MDHSESLTFNQLTQDYINKLKDAFQMLDEDEDGLISRGDLTKIYATLGKTLTDEEWSKMV
PDNDTSTAEVGEEGVSFPIFLSIMGKNLSQFPEREELEESLKAIGRGHDLNVPLNEVIDS
LKEAGFENPEEEFAKLFKLFTTNQQATEERTFRGKLFLDSITD
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Identical sequences B3LKE7 C7GP69 C8ZJL7 E7KJ14 E7KVR3 E7QM28 G2WPZ9 H0GQ88 Q06580 W7PV40 W7QUK6
YPR188C YPR188C SCRT_02661 YPR188C YPR188C YPR188C YPR188C YPR188C 4932.YPR188C YPR188C YPR188C YPR188C YPR188C YPR188C YPR188C YPR188C YPR188C YPR188C YPR188C YPR188C YPR188C

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