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Domain assignment for P62269 from Uniprot 2017_06 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  P62269
Domain Number 1 Region: 13-152
Classification Level Classification E-value
Superfamily S13-like H2TH domain 2.06e-39
Family Ribosomal protein S13 0.0026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
DNA repair 1.506 23.64
translation 1.514 9.55
Molecular Function IC (bits) H-Score
structural constituent of ribosome 1.959 14.23
hydrolase activity, acting on glycosyl bonds 1.723 11.58
lyase activity 1.408 7.61
single-stranded DNA binding 2.111 4.77
Cellular Component IC (bits) H-Score
ribosomal subunit 1.983 15.6
cytosol 1.295 10.26
intracellular ribonucleoprotein complex 1.368 8.5
cytosolic ribosome 2.235 5.02

Protein sequence

External link(s) P62269
Sequence length 152
Comment (sp|P62269|RS18_HUMAN) Small ribosomal subunit protein uS13 {ECO:0000303|PubMed:24524803} KW=Complete proteome; Reference proteome OX=9606 OS=Homo sapiens (Human). GN=RPS18; OC=Catarrhini; Hominidae; Homo.
Sequence
MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT
EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH
RGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK
Download sequence
Identical sequences A0A091CWR0 A0A0B8RWD9 A0A0N8ESM4 A0A0P6CD52 A0A1B8Z0R3 A0A1S3A0K9 A0A1S3GP31 A0A1U7TKT0 A5JST6 B5FXB5 F7I089 G1TPG3 G3QUM7 G3VXJ6 G7N7R0 H0WTR0 H2PXT1 H2RE42 J3S0S0 K7FFY7 L9L485 P62269 P62270 P62271 P62272 Q3T0R1 Q561N5 Q5TJE9 T1DJ02 U3FW44
ENSSHAP00000007901 ENSOCUP00000018898 ENSPTRP00000030810 ENSPTRP00000059777 ENSPCAP00000005425 ENSDORP00000012996 ENSPSIP00000006947 ENSTBEP00000010997 ENSPCAP00000005425 3j7p.SS 3j7r.SS 4d5l.S 4d61.S 4kzx.S 4kzy.S 4kzz.S 4ug0.SS 4ujc.CS 4ujd.CS 4uje.BS 4v5z.Am 4v6x.AS 5a2q.S 5aj0.BS 5flx.S 5lks.SS 5lzs.SS 5lzt.SS 5lzu.SS 5lzv.SS 5lzw.SS 5lzx.SS 5lzy.SS 5lzz.SS 5t2c.A0 gi|11968182|ref|NP_072045.1| ENSDORP00000012996 ENSOGAP00000005559 ENSNLEP00000008324 ENSP00000211372 ENSP00000393241 ENSP00000403175 ENSP00000412583 ENSP00000416110 ENSPTRP00000030810 ENSPTRP00000059777 2zkqm ENSMEUP00000015328 ENSMUSP00000008812 ENSDNOP00000009369 ENSSSCP00000001631 ENSCAFP00000001357 ENSGGOP00000006432 Hs11968182___KOG3311 ENSBTAP00000003431 ENSRNOP00000030371 ENSRNOP00000047371 ENSTTRP00000004046 ENSOGAP00000005559 ENSSHAP00000007901 ENSPPYP00000023575 ENSRNOP00000030371 ENSRNOP00000047371 10090.ENSMUSP00000008812 10116.ENSRNOP00000030371 10116.ENSRNOP00000047371 9361.ENSDNOP00000009369 9598.ENSPTRP00000030810 9600.ENSPPYP00000023575 9606.ENSP00000211372 9606.ENSP00000393241 9606.ENSP00000403175 9606.ENSP00000412583 9606.ENSP00000416110 9615.ENSCAFP00000001357 9823.ENSSSCP00000001631 9913.ENSBTAP00000003431 9986.ENSOCUP00000018898 ENSCJAP00000040308 ENSEEUP00000009377 ENSBTAP00000003431 ENSTTRP00000004046 ENSMUSP00000008812 ENSEEUP00000009377 ENSGGOP00000006432 ENSMUSP00000008812 ENSOCUP00000018898 ENSTBEP00000010997 ENSSSCP00000001631 ENSPVAP00000001796 ENSP00000211372 ENSP00000393241 ENSP00000403175 ENSP00000412583 ENSP00000416110 ENSCAFP00000001357 ENSMEUP00000015328 ENSPSIP00000006947 ENSP00000211372 ENSP00000393241 ENSP00000403175 ENSP00000412583 ENSP00000416110 ENSPVAP00000001796 ENSPPYP00000023575 ENSCJAP00000040308

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