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Domain assignment for P62269 from Uniprot 2014_06

Domain architecture


Domain assignment details

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Strong hits

Sequence:  P62269
Domain Number 1 Region: 13-152
Classification Level Classification E-value
Superfamily S13-like H2TH domain 2.06e-39
Family Ribosomal protein S13 0.0026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
DNA repair 1.496 22.36
translation 1.507 9.65
Cellular Component IC (bits) H-Score
ribosomal subunit 1.939 15.78
cytosolic part 1.704 10.48
intracellular ribonucleoprotein complex 1.329 8.68
cytosolic ribosome 2.192 5.02
Molecular Function IC (bits) H-Score
endonuclease activity 1.983 20.97
nuclease activity 1.579 14.39
structural constituent of ribosome 1.946 14.3
hydrolase activity, acting on glycosyl bonds 1.71 10.61
lyase activity 1.395 7.88
single-stranded DNA binding 2.163 4.67

Protein sequence

External link(s) P62269
Sequence length 152
Comment (sp|P62269|RS18_HUMAN) Ke-3 KW=Complete proteome; Reference proteome OX=9606 OS=Homo sapiens (Human). GN=RPS18 OC=Catarrhini; Hominidae; Homo.
Sequence
MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT
EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH
RGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK
Download sequence
Identical sequences A5JST6 B5FXB5 F7I089 G1TPG3 G3QUM7 G3VXJ6 G7N7R0 H0WTR0 H2PXT1 H2RE42 J3S0S0 K7FFY7 L9L485 P62269 P62270 P62271 P62272 Q3T0R1 Q561N5 Q5TJE9 T1DJ02 U3FW44
ENSPPYP00000023575 ENSBTAP00000003431 ENSSHAP00000007901 ENSMEUP00000015328 ENSPCAP00000005425 ENSOGAP00000005559 ENSEEUP00000009377 ENSMUSP00000008812 ENSTBEP00000010997 2zkqm ENSOCUP00000018898 ENSTTRP00000004046 ENSSHAP00000007901 ENSOGAP00000005559 ENSPTRP00000030810 ENSPTRP00000059777 ENSOCUP00000018898 ENSGGOP00000006432 ENSNLEP00000008324 gi|11968182|ref|NP_072045.1| 1vx2.S 1vx5.S 2zkq.m 3j3a.S 4cxc.S 4kzx.S 4kzy.S 4kzz.S 4uq4.S 4uq5.S 4w23.S 4w28.S ENSRNOP00000030371 ENSRNOP00000047371 ENSRNOP00000030371 ENSRNOP00000047371 ENSPVAP00000001796 ENSCJAP00000040308 ENSP00000211372 ENSP00000393241 ENSP00000403175 ENSP00000412583 ENSP00000416110 ENSMUSP00000008812 ENSCJAP00000040308 ENSTTRP00000004046 10090.ENSMUSP00000008812 10116.ENSRNOP00000030371 10116.ENSRNOP00000047371 9361.ENSDNOP00000009369 9598.ENSPTRP00000030810 9600.ENSPPYP00000023575 9606.ENSP00000211372 9606.ENSP00000393241 9606.ENSP00000403175 9606.ENSP00000412583 9606.ENSP00000416110 9615.ENSCAFP00000001357 9823.ENSSSCP00000001631 9913.ENSBTAP00000003431 9986.ENSOCUP00000018898 ENSBTAP00000003431 ENSPSIP00000006947 ENSDNOP00000009369 ENSMEUP00000015328 Hs11968182___KOG3311 ENSPPYP00000023575 ENSPCAP00000005425 ENSP00000211372 ENSP00000393241 ENSP00000403175 ENSP00000412583 ENSP00000416110 ENSEEUP00000009377 ENSSSCP00000001631 ENSSSCP00000001631 ENSP00000211372 ENSP00000393241 ENSP00000403175 ENSP00000412583 ENSP00000416110 ENSMUSP00000008812 ENSDORP00000012996 ENSCAFP00000001357 ENSCAFP00000001357 ENSPSIP00000006947 ENSGGOP00000006432 ENSTBEP00000010997 ENSPVAP00000001796 ENSDORP00000012996 ENSPTRP00000030810 ENSPTRP00000059777

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