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Domain assignment for P62269 from Uniprot 2017_06 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  P62269
Domain Number 1 Region: 13-152
Classification Level Classification E-value
Superfamily S13-like H2TH domain 2.06e-39
Family Ribosomal protein S13 0.0026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
structural constituent of ribosome 1.959 14.23
hydrolase activity, acting on glycosyl bonds 1.723 11.58
lyase activity 1.408 7.61
single-stranded DNA binding 2.111 4.77
Biological Process IC (bits) H-Score
DNA repair 1.506 23.64
translation 1.514 9.55
Cellular Component IC (bits) H-Score
ribosomal subunit 1.983 15.6
cytosol 1.295 10.26
intracellular ribonucleoprotein complex 1.368 8.5
cytosolic ribosome 2.235 5.02

Protein sequence

External link(s) P62269
Sequence length 152
Comment (sp|P62269|RS18_HUMAN) Small ribosomal subunit protein uS13 {ECO:0000303|PubMed:24524803} KW=Complete proteome; Reference proteome OX=9606 OS=Homo sapiens (Human). GN=RPS18; OC=Catarrhini; Hominidae; Homo.
Sequence
MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT
EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH
RGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK
Download sequence
Identical sequences A0A091CWR0 A0A0B8RWD9 A0A0N8ESM4 A0A0P6CD52 A0A1B8Z0R3 A0A1S3A0K9 A0A1S3GP31 A0A1U7TKT0 A5JST6 B5FXB5 F7I089 G1TPG3 G3QUM7 G3VXJ6 G7N7R0 H0WTR0 H2PXT1 H2RE42 J3S0S0 K7FFY7 L9L485 P62269 P62270 P62271 P62272 Q3T0R1 Q561N5 Q5TJE9 T1DJ02 U3FW44
ENSPSIP00000006947 ENSSHAP00000007901 ENSCAFP00000001357 ENSNLEP00000008324 Hs11968182___KOG3311 ENSMUSP00000008812 ENSTTRP00000004046 10090.ENSMUSP00000008812 10116.ENSRNOP00000030371 10116.ENSRNOP00000047371 9361.ENSDNOP00000009369 9598.ENSPTRP00000030810 9600.ENSPPYP00000023575 9606.ENSP00000211372 9606.ENSP00000393241 9606.ENSP00000403175 9606.ENSP00000412583 9606.ENSP00000416110 9615.ENSCAFP00000001357 9823.ENSSSCP00000001631 9913.ENSBTAP00000003431 9986.ENSOCUP00000018898 ENSEEUP00000009377 ENSPTRP00000030810 ENSPTRP00000059777 ENSCJAP00000040308 2zkqm ENSSSCP00000001631 ENSP00000211372 ENSP00000393241 ENSP00000403175 ENSP00000412583 ENSP00000416110 3j7p.SS 3j7r.SS 4d5l.S 4d61.S 4kzx.S 4kzy.S 4kzz.S 4ug0.SS 4ujc.CS 4ujd.CS 4uje.BS 4v5z.Am 4v6x.AS 5a2q.S 5aj0.BS 5flx.S 5lks.SS 5lzs.SS 5lzt.SS 5lzu.SS 5lzv.SS 5lzw.SS 5lzx.SS 5lzy.SS 5lzz.SS 5t2c.A0 ENSRNOP00000030371 ENSRNOP00000047371 ENSCAFP00000001357 ENSDORP00000012996 ENSP00000211372 ENSP00000393241 ENSP00000403175 ENSP00000412583 ENSP00000416110 ENSDORP00000012996 ENSSHAP00000007901 ENSOGAP00000005559 ENSCJAP00000040308 ENSRNOP00000030371 ENSRNOP00000047371 ENSGGOP00000006432 ENSMEUP00000015328 ENSPPYP00000023575 ENSPSIP00000006947 gi|11968182|ref|NP_072045.1| ENSOCUP00000018898 ENSOCUP00000018898 ENSEEUP00000009377 ENSPCAP00000005425 ENSPTRP00000030810 ENSPTRP00000059777 ENSMUSP00000008812 ENSPVAP00000001796 ENSTBEP00000010997 ENSBTAP00000003431 ENSPCAP00000005425 ENSSSCP00000001631 ENSTBEP00000010997 ENSTTRP00000004046 ENSP00000211372 ENSP00000393241 ENSP00000403175 ENSP00000412583 ENSP00000416110 ENSGGOP00000006432 ENSOGAP00000005559 ENSPVAP00000001796 ENSMUSP00000008812 ENSPPYP00000023575 ENSDNOP00000009369 ENSBTAP00000003431 ENSMEUP00000015328

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