SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


Chromosomal protein MC1 superfamily domain assignments
in
halophilic archaeon DL31

Network of domain occurrence in all genomes


Assignment details

(show help)


halophilic archaeon DL31 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|345006072|ref|YP_004808925.1|   2.62e-32   18-113   Chromosomal protein MC1  

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a Chromosomal protein MC1 domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   1549 1549
No Yes Bigelowiella natans CCMP2755 22   1 1
No Yes halophilic archaeon DL31   1 1
No Yes Methanocella arvoryzae MRE50   2 2
No Yes Methanocella conradii HZ254   3 3
No Yes Methanocella paludicola SANAE   3 3
No Yes Methanosaeta harundinacea 6Ac   1 1
No Yes Methanosaeta thermophila PT   1 1
No Yes Methanosaeta concilii GP6   4 4
No Yes Methanosalsum zhilinae DSM 4017   1 1
No Yes Methanohalobium evestigatum Z-7303   1 1
No Yes Methanococcoides burtonii DSM 6242   1 1
No Yes Methanosarcina acetivorans C2A   3 3
No Yes Methanosarcina mazei Go1   3 3
No Yes Methanosarcina barkeri str. Fusaro   2 2
No Yes Methanohalophilus mahii DSM 5219   1 1
No Yes Salinarchaeum sp. Harcht-Bsk1   1 1
No Yes Halopiger xanaduensis SH-6   1 1
No Yes Haloterrigena turkmenica DSM 5511   1 1
No Yes Natrinema sp. J7-2   1 1
No Yes Natrialba magadii ATCC 43099   1 1
No Yes Halorubrum lacusprofundi ATCC 49239   1 1
No Yes Haloquadratum walsbyi DSM 16790   1 1
No Yes Halogeometricum borinquense DSM 11551   1 1
No Yes Haloferax mediterranei ATCC 33500   2 2
No Yes Haloferax volcanii DS2   1 1
No Yes Halomicrobium mukohataei DSM 12286   1 1
No Yes Halorhabdus utahensis DSM 12940   1 1
No Yes Natronomonas pharaonis DSM 2160   1 1
No Yes Haloarcula hispanica ATCC 33960   1 1
No Yes Haloarcula marismortui ATCC 43049   1 1
No Yes Halalkalicoccus jeotgali B3   1 1
No Yes Halobacterium salinarum R1   1 1
No Yes Halobacterium sp. NRC-1   1 1
No Yes Methanomethylovorans hollandica DSM 15978   1 1
No Yes Methanolobus psychrophilus R15   1 1
No Yes Methanosarcina mazei Tuc01   2 2
No Yes Halovivax ruber XH-70   1 1
No Yes Natrinema pellirubrum DSM 15624   1 1
No Yes Natronococcus occultus SP4   1 1
No Yes Natronobacterium gregoryi SP2   1 1
No Yes Haloquadratum walsbyi C23   1 1
No Yes Halorhabdus tiamatea SARL4B   1 1
No Yes Natronomonas moolapensis 8.8.11   1 1
No Yes Haloarcula hispanica N601   1 1
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   1 1
No Yes NCBI 2017_08 genome   580 580
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   1 1
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   23 23
No Yes Uniprot 2018_03 genome   741 741
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   11 11
No Yes Global Ocean Sampling Expedition (GOS)   55 55
No Yes NCBI viral sequences (Viral)   15 15
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   3 3
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   9 9
No Yes TargetDB (Targets)   2 2
No Yes UniProt viral sequences (Viral)   8 8

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]