SUPERFAMILY 1.73 HMM library and genome assignments server


Mitochondrial carrier superfamily domain assignments
in
Saccharomyces cerevisiae SGD

Network of domain occurrence in all genomes


Assignment details

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Saccharomyces cerevisiae SGD (SGD) has 35 significant domains in 35 proteins.

     

Sequence ID   Evalue   Region   Family  
YBL030C   1.78e-77   18-308   Mitochondrial carrier  
YBR085W   2.36e-76   7-297   Mitochondrial carrier  
YBR104W   1.67e-68   32-322   Mitochondrial carrier  
YBR192W   3.65e-79   47-372   Mitochondrial carrier  
YBR291C   3.5e-69   7-294   Mitochondrial carrier  
YDL119C   1.53e-52   7-302   Mitochondrial carrier  
YDL198C   1.07e-47   5-286   Mitochondrial carrier  
YDR470C   5.07e-20   128-149,221-490   Mitochondrial carrier  
YEL006W   1.32e-76   33-325   Mitochondrial carrier  
YER053C   1.67e-58   21-288   Mitochondrial carrier  
YFR045W   2.57e-48   3-299   Mitochondrial carrier  
YGR096W   9.02e-60   11-305   Mitochondrial carrier  
YGR257C   9.4e-65   8-49,97-354   Mitochondrial carrier  
YHR002W   3.66e-67   28-351   Mitochondrial carrier  
YIL006W   6.24e-74   73-361   Mitochondrial carrier  
YIL134W   1.66e-60   4-307   Mitochondrial carrier  
YJL133W   9.54e-72   28-305   Mitochondrial carrier  
YJR077C   5.68e-59   16-291   Mitochondrial carrier  
YJR095W   1.6e-79   5-300   Mitochondrial carrier  
YKL120W   1.41e-73   18-308   Mitochondrial carrier  
YKR052C   1.48e-70   18-295   Mitochondrial carrier  
YLR348C   4.52e-61   11-286   Mitochondrial carrier  
YMR056C   1.02e-75   9-299   Mitochondrial carrier  
YMR166C   1.57e-73   48-354   Mitochondrial carrier  
YMR241W   2.09e-43   15-296   Mitochondrial carrier  
YNL003C   2.87e-61   1-268   Mitochondrial carrier  
YNL083W   8.97e-61   222-538   Mitochondrial carrier  
YOR100C   1.83e-66   30-316   Mitochondrial carrier  
YOR130C   9.17e-67   11-289   Mitochondrial carrier  
YOR222W   4.44e-79   8-293   Mitochondrial carrier  
YPL134C   3.43e-69   6-294   Mitochondrial carrier  
YPR011C   3.02e-78   19-319   Mitochondrial carrier  
YPR021C   3.65e-70   10-22,562-810   Mitochondrial carrier  
YPR058W   7.76e-67   20-301   Mitochondrial carrier  
YPR128C   9.46e-54   4-297   Mitochondrial carrier  

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View all assignments containing a Mitochondrial carrier domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   21704 21704
No Yes Homo sapiens 49_36k (all transcripts) Human 91 91
No Yes Pan troglodytes 49_21h (all transcripts) Chimpanzee 74 74
No Yes Gorilla gorilla 52_1 (all transcripts) Western Gorilla 43 43
No Yes Pongo pygmaeus 49_1 (all transcripts) Bornean orangutan 58 58
No Yes Macaca mulatta 49_10h (all transcripts) Rhesus monkey 93 93
No Yes Callithrix jacchus 56_3 (all transcripts) White-tufted-ear marmoset 107 107
No Yes Otolemur garnettii 49_1c (all transcripts) Small-eared galago 43 43
No Yes Microcebus murinus 49_1 (all transcripts) Gray mouse lemur 53 53
No Yes Tarsius syrichta 51_1 (all transcripts) Philippine tarsier 36 36
No Yes Rattus norvegicus 49_34s (all transcripts) Norway rat 86 86
No Yes Mus musculus 49_37b (all transcripts) House mouse 83 83
No Yes Spermophilus tridecemlineatus 49_1e (all transcripts) Thirteen-lined ground squirrel 41 41
No Yes Dipodomys ordii 51_1 (all transcripts) Ord's kangaroo rat 49 49
No Yes Cavia porcellus 51_3 (all transcripts) Domestic guinea pig 51 51
No Yes Oryctolagus cuniculus 49_1f (all transcripts) Rabbit 46 46
No Yes Ochotona princeps 49_1 (all transcripts) American pika 45 45
No Yes Tupaia belangeri 49_1d (all transcripts) Northern tree shrew 43 43
No Yes Sus scrofa 56_9 (all transcripts) Pig 43 43
No Yes Bos taurus 49_3f (all transcripts) Cattle 63 63
No Yes Vicugna pacos 51_1 (all transcripts) Alpaca 37 37
No Yes Tursiops truncatus 51_1 (all transcripts) Bottlenosed dolphin 49 49
No Yes Canis familiaris 49_2g (all transcripts) Dog 69 69
No Yes Felis catus 49_1c (all transcripts) Domestic cat 43 43
No Yes Equus caballus 49_2 (all transcripts) Horse 52 52
No Yes Myotis lucifugus 49_1e (all transcripts) Little brown bat 50 50
No Yes Pteropus vampyrus 51_1 (all transcripts) Large flying fox 50 50
No Yes Sorex araneus 49_1c (all transcripts) European shrew 39 39
No Yes Erinaceus europaeus 49_1c (all transcripts) Western European hedgehog 45 45
No Yes Procavia capensis 51_1 (all transcripts) Cape rock hyrax 46 46
No Yes Loxodonta africana 49_1d (all transcripts) African savanna elephant 38 38
No Yes Echinops telfairi 49_1e (all transcripts) Small Madagascar hedgehog 57 57
No Yes Dasypus novemcinctus 49_1f (all transcripts) Nine-banded armadillo 34 34
No Yes Macropus eugenii 55_1 (all transcripts) Tammar wallaby 50 50
No Yes Monodelphis domestica 49_5d (all transcripts) Gray short-tailed opossum 83 83
No Yes Ornithorhynchus anatinus 49_1f (all transcripts) Platypus 66 66
No Yes Anolis carolinensis 55_1a (all transcripts) Green anole 50 50
No Yes Taeniopygia guttata 57_1c (all transcripts) Zebra finch 52 52
No Yes Meleagris gallopavo 57_2 (all transcripts) Turkey 44 44
No Yes Gallus gallus 49_2g (all transcripts) Chicken 53 53
No Yes Xenopus laevis African clawed frog 109 109
No Yes Xenopus tropicalis 49_41i (all transcripts) Western clawed frog 56 56
No Yes Danio rerio 49_7c (all transcripts) Zebrafish 92 92
No Yes Gasterosteus aculeatus 49_1f (all transcripts) Three-spined stickleback 87 87
No Yes Oryzias latipes 49_1e (all transcripts) Japanese medaka 95 95
No Yes Tetraodon nigroviridis 49_1k (all transcripts) Spotted green pufferfish 68 68
No Yes Takifugu rubripes 49_4i (all transcripts) Torafugu 136 136
No Yes Branchiostoma floridae 1.0 Florida lancelet 72 72
No Yes Ciona savignyi 49_2f (all transcripts)   45 45
No Yes Ciona intestinalis 49_2i (all transcripts)   46 46
No Yes Strongylocentrotus purpuratus Purple sea urchin 108 108
No Yes Helobdella robusta   33 33
No Yes Capitella sp. I   43 43
No Yes Bombyx mori Domestic silkworm 38 38
No Yes Nasonia vitripennis Jewel wasp 32 32
No Yes Apis mellifera 37.2d (all transcripts) (Not maintained) Honey bee 122 122
No Yes Drosophila grimshawi 1.3   46 46
No Yes Drosophila willistoni 1.3   45 45
No Yes Drosophila pseudoobscura 2.3   49 49
No Yes Drosophila persimilis 1.3   61 61
No Yes Drosophila yakuba 1.3   52 52
No Yes Drosophila simulans 1.3   47 47
No Yes Drosophila sechellia 1.3   52 52
No Yes Drosophila melanogaster Ensembl 49_54 (all transcripts) Fruit fly 83 83
No Yes Drosophila erecta 1.3   49 49
No Yes Drosophila ananassae 1.3   53 53
No Yes Drosophila virilis 1.2   46 46
No Yes Drosophila mojavensis 1.3   43 43
No Yes Aedes aegypti 49_1b (all transcripts) Yellow fever mosquito 46 46
No Yes Culex pipiens quinquefasciatus Southern house mosquito 49 49
No Yes Anopheles gambiae 49_3j (all transcripts) African malaria mosquito 36 36
No Yes Tribolium castaneum 3.0 Red flour beetle 38 38
No Yes Pediculus humanus corporis (Early assembly) Human body louse 40 40
No Yes Acyrthosiphon pisum Pea aphid 34 34
No Yes Daphnia pulex Common water flea 35 35
No Yes Ixodes scapularis (Preliminary) Black-legged tick 36 36
No Yes Lottia gigantea   36 36
No Yes Pristionchus pacificus   37 36
No Yes Meloidogyne incognita Southern root-knot nematode 39 39
No Yes Meloidogyne hapla   27 27
No Yes Brugia malayi Agent of lymphatic filariasis 15 15
No Yes Caenorhabditis japonica   32 32
No Yes Caenorhabditis brenneri   35 35
No Yes Caenorhabditis remanei   45 45
No Yes Caenorhabditis elegans Ensembl 49_180a (all transcripts) Nematode 57 57
No Yes Caenorhabditis briggsae 2   37 37
No Yes Schistosoma mansoni   30 30
No Yes Nematostella vectensis 1.0 Starlet sea anemone 56 56
No Yes Hydra magnipapillata   44 44
No Yes Trichoplax adhaerens   34 33
No Yes Proterospongia sp. ATCC 50818   39 39
No Yes Monosiga brevicollis   37 37
No Yes Capsaspora owczarzaki ATCC 30864   41 41
No Yes Malassezia globosa CBS 7966   32 32
No Yes Ustilago maydis   39 39
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   36 36
No Yes Melampsora laricis-populina   35 35
No Yes Sporobolomyces roseus IAM 13481   37 37
No Yes Serpula lacrymans var. lacrymans S7.9   38 38
No Yes Coprinopsis cinerea okayama7 130   39 39
No Yes Pleurotus ostreatus Oyster mushroom 36 36
No Yes Laccaria bicolor S238N-H82   41 41
No Yes Agaricus bisporus var. bisporus   35 35
No Yes Schizophyllum commune   36 36
No Yes Heterobasidion annosum   37 37
No Yes Phanerochaete chrysosporium RP-78 2.1   36 36
No Yes Postia placenta   62 62
No Yes Tremella mesenterica   35 35
No Yes Cryptococcus neoformans JEC21   31 31
No Yes Magnaporthe grisea 70-15   39 39
No Yes Podospora anserina   37 37
No Yes Sporotrichum thermophile ATCC 42464   34 34
No Yes Thielavia terrestris NRRL 8126   34 34
No Yes Chaetomium globosum CBS 148.51   36 36
No Yes Neurospora tetrasperma   36 36
No Yes Neurospora discreta FGSC 8579   37 37
No Yes Neurospora crassa OR74A   37 37
No Yes Cryphonectria parasitica Chestnut blight fungus 38 38
No Yes Fusarium oxysporum f. sp. lycopersici 4286   44 44
No Yes Nectria haematococca mpVI   50 50
No Yes Fusarium verticillioides 7600   42 42
No Yes Fusarium graminearum   42 42
No Yes Trichoderma atroviride   38 38
No Yes Trichoderma reesei 1.2   37 37
No Yes Trichoderma virens Gv29-8   39 39
No Yes Verticillium dahliae VdLs.17   39 39
No Yes Verticillium albo-atrum VaMs.102   36 36
No Yes Botrytis cinerea B05.10   36 36
No Yes Sclerotinia sclerotiorum   37 37
No Yes Alternaria brassicicola   37 37
No Yes Pyrenophora tritici-repentis   41 41
No Yes Cochliobolus heterostrophus   40 40
No Yes Stagonospora nodorum   43 43
No Yes Mycosphaerella fijiensis CIRAD86   36 36
No Yes Mycosphaerella graminicola IPO323   41 41
No Yes Ajellomyces dermatitidis SLH14081   35 35
No Yes Histoplasma capsulatum class NAmI strain WU24   34 34
No Yes Microsporum gypseum   38 38
No Yes Arthroderma benhamiae CBS 112371   30 30
No Yes Microsporum canis CBS 113480   37 37
No Yes Trichophyton equinum CBS 127.97   34 34
No Yes Trichophyton verrucosum HKI 0517   31 31
No Yes Trichophyton tonsurans CBS 112818   36 36
No Yes Trichophyton rubrum CBS 118892   35 35
No Yes Paracoccidioides brasiliensis Pb18   36 36
No Yes Coccidioides posadasii RMSCC 3488   35 35
No Yes Coccidioides immitis RS   35 35
No Yes Uncinocarpus reesii 1704   36 36
No Yes Aspergillus fumigatus Af293   39 39
No Yes Neosartorya fischeri NRRL 181   39 39
No Yes Penicillium chrysogenum Wisconsin 54-1255   41 41
No Yes Penicillium marneffei ATCC 18224   44 44
No Yes Aspergillus carbonarius ITEM 5010   41 41
No Yes Aspergillus terreus NIH2624   43 43
No Yes Aspergillus oryzae RIB40   44 44
No Yes Aspergillus niger ATCC 1015   25 25
No Yes Aspergillus flavus NRRL3357   44 44
No Yes Aspergillus clavatus NRRL 1   38 38
No Yes Aspergillus nidulans FGSC A4   39 39
No Yes Tuber melanosporum Vittad Perigord truffle 35 35
No Yes Candida dubliniensis CD36   34 34
No Yes Candida tropicalis MYA-3404   34 34
No Yes Candida parapsilosis   33 33
No Yes Candida albicans SC5314   34 34
No Yes Yarrowia lipolytica CLIB122   39 39
No Yes Candida lusitaniae ATCC 42720   32 32
No Yes Vanderwaltozyma polyspora DSM 70294   35 35
No Yes Candida glabrata CBS138   31 31
No Yes Kluyveromyces thermotolerans CBS 6340   33 33
No Yes Lachancea kluyveri   34 34
No Yes Kluyveromyces waltii   33 33
No Yes Lodderomyces elongisporus NRRL YB-4239   34 34
No Yes Ashbya gossypii ATCC 10895   28 28
No Yes Debaromyces hansenii   36 36
No Yes Zygosaccharomyces rouxii   34 34
No Yes Saccharomyces mikatae MIT   36 36
No Yes Saccharomyces paradoxus MIT   35 35
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 35 35
No Yes Saccharomyces bayanus MIT   37 37
No Yes Candida guilliermondii ATCC 6260   36 36
No Yes Pichia stipitis CBS 6054   35 35
No Yes Pichia pastoris GS115   35 35
No Yes Kluyveromyces lactis   30 30
No Yes Schizosaccharomyces octosporus yFS286   24 24
No Yes Schizosaccharomyces japonicus yFS275   26 26
No Yes Schizosaccharomyces pombe Fission yeast 24 24
No Yes Allomyces macrogynus ATCC 38327   76 76
No Yes Rhizopus oryzae RA 99-880   64 64
No Yes Phycomyces blakesleeanus   53 53
No Yes Mucor circinelloides   61 61
No Yes Spizellomyces punctatus DAOM BR117   48 48
No Yes Batrachochytrium dendrobatidis JEL423   36 36
No Yes Dictyostelium discoideum   37 37
No Yes Dictyostelium purpureum   36 36
No Yes Entamoeba dispar   1 1
No Yes Entamoeba invadens   1 1
No Yes Entamoeba histolytica 1   1 1
No Yes Arabidopsis lyrata Lyrate rockcress 68 68
No Yes Arabidopsis thaliana 9 (all transcripts) Thale cress 67 67
No Yes Carica papaya Papaya 59 59
No Yes Medicago truncatula Barrel medic 73 73
No Yes Glycine max Soybean 139 139
No Yes Cucumis sativus Cucumber 107 107
No Yes Populus trichocarpa 1.1 Black cottonwood 98 98
No Yes Vitis vinifera Wine grape 66 66
No Yes Brachypodium distachyon   76 76
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 89 89
No Yes Zea mays subsp. mays Maize 151 151
No Yes Sorghum bicolor Sorghum 67 67
No Yes Selaginella moellendorffii   107 107
No Yes Physcomitrella patens subsp. patens   95 95
No Yes Coccomyxa sp. C-169   41 41
No Yes Chlorella sp. NC64A   33 33
No Yes Chlorella vulgaris   41 41
No Yes Volvox carteri f. nagariensis   40 40
No Yes Chlamydomonas reinhardtii 4.0   44 44
No Yes Ostreococcus sp. RCC809   40 39
No Yes Ostreococcus lucimarinus CCE9901   43 43
No Yes Ostreococcus tauri   39 39
No Yes Micromonas sp. RCC299   45 45
No Yes Micromonas pusilla CCMP1545   43 43
No Yes Cyanidioschyzon merolae   31 31
No Yes Trypanosoma cruzi strain CL Brener   57 55
No Yes Trypanosoma brucei   30 29
No Yes Leishmania mexicana   35 34
No Yes Leishmania major strain Friedlin   42 41
No Yes Leishmania infantum JPCM5   37 36
No Yes Leishmania braziliensis MHOM/BR/75/M2904   35 34
No Yes Aureococcus anophagefferens   62 62
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 47 47
No Yes Phytophthora sojae 1.1   46 46
No Yes Phytophthora infestans T30-4   50 50
No Yes Phytophthora capsici   52 52
No Yes Phaeodactylum tricornutum   63 63
No Yes Fragilariopsis cylindrus   97 97
No Yes Thalassiosira pseudonana   58 58
No Yes Paramecium tetraurelia   100 100
No Yes Tetrahymena thermophila SB210 1   54 54
No Yes Babesia bovis T2Bo   8 8
No Yes Theileria parva   10 10
No Yes Theileria annulata   10 10
No Yes Plasmodium falciparum 3D7   13 13
No Yes Plasmodium vivax SaI-1   15 15
No Yes Plasmodium knowlesi strain H   13 13
No Yes Plasmodium yoelii ssp. yoelii 1   11 11
No Yes Plasmodium chabaudi   14 14
No Yes Plasmodium berghei ANKA   14 14
No Yes Cryptosporidium hominis   8 8
No Yes Cryptosporidium muris   13 13
No Yes Cryptosporidium parvum Iowa II   9 9
No Yes Neospora caninum Nc-Liverpool   19 19
No Yes Neospora caninum   17 17
No Yes Toxoplasma gondii ME49   22 22
No Yes Naegleria gruberi   54 54
No Yes Trichomonas vaginalis   6 6
No Yes Emiliania huxleyi CCMP1516   173 173
No Yes Neorickettsia risticii Illinois   2 2
No Yes Legionella longbeachae NSW150   3 3
No Yes Cyanothece sp. ATCC 51142   1 1
No Yes Thermococcus gammatolerans EJ3   1 1
No Yes Drosophila melanogaster FlyBase 5.12 (all transcripts) (FlyBase) Fruit fly 83 83
No Yes Caenorhabditis elegans WormBase WS194 (all transcripts) (WormBase) Nematode 44 44
No Yes Cryptococcus neoformans var. grubii H99   37 37
No Yes Cryptococcus neoformans B-3501A   37 37
No Yes Ajellomyces dermatitidis ER-3   35 35
No Yes Histoplasma capsulatum H143   36 36
No Yes Histoplasma capsulatum H88   35 35
No Yes Histoplasma capsulatum G186AR   35 35
No Yes Paracoccidioides brasiliensis Pb01   35 35
No Yes Paracoccidioides brasiliensis Pb03   36 36
No Yes Coccidioides posadasii str. Silveira   34 34
No Yes Coccidioides immitis RMSCC 3703   34 34
No Yes Coccidioides immitis RMSCC 2394   34 34
No Yes Coccidioides immitis H538.4   36 36
No Yes Aspergillus fumigatus A1163   38 38
No Yes Candida albicans WO-1   34 34
No Yes Saccharomyces cerevisiae YJM789   35 35
No Yes Saccharomyces cerevisiae RM11-1a   35 35
No Yes Saccharomyces cerevisiae Ensembl 49_1h (all transcripts) Baker's yeast 35 35
No Yes Schizosaccharomyces pombe 972h-   24 24
No Yes Batrachochytrium dendrobatidis JAM81   35 35
No Yes Oryza sativa ssp. Indica (Subspecies) Indian rice 67 66
No Yes Plasmodium falciparum HB3   12 12
No Yes Plasmodium falciparum Dd2   9 9
No Yes Legionella pneumophila Corby   1 1
No Yes Legionella pneumophila Paris   1 1
No Yes Legionella pneumophila Lens   1 1
No Yes Ailuropoda melanoleuca (Draft) Giant panda 52 52
No Yes Moniliophthora perniciosa FA553 (Genome survey)   44 44
No Yes Lotus japonicus (Early assembly)   11 11
No Yes Prunus persica (Early draft) Peach 61 61
No Yes Manihot esculenta (Early draft) Cassava 91 91
No Yes Ricinus communis (Early assembly) Castor bean 66 66
No Yes Mimulus guttatus (Early draft) Spotted monkey flower 75 75
No Yes Phoenix dactylifera (Early draft) Date palm 55 55
No Yes Trypanosoma vivax (Parial)   31 30
No Yes Trypanosoma congolense (Partial)   36 35
No Yes Toxoplasma gondii GT1 (Early assembly)   23 23
No Yes Toxoplasma gondii VEG (Early assembly)   22 22
No Yes Toxoplasma gondii RH (Archived)   20 20
No Yes Homo sapiens 49_36k (longest transcript per gene) Human 54 54
No Yes Pan troglodytes 49_21h (longest transcript per gene) Chimpanzee 52 52
No Yes Gorilla gorilla 52_1 (longest transcript per gene) Western Gorilla 43 43
No Yes Pongo pygmaeus 49_1 (longest transcript per gene) Bornean orangutan 51 51
No Yes Macaca mulatta 49_10h (longest transcript per gene) Rhesus monkey 58 58
No Yes Callithrix jacchus 56_3 (longest transcript per gene) White-tufted-ear marmoset 56 56
No Yes Otolemur garnettii 49_1c (longest transcript per gene) Small-eared galago 43 43
No Yes Microcebus murinus 49_1 (longest transcript per gene) Gray mouse lemur 53 53
No Yes Tarsius syrichta 51_1 (longest transcript per gene) Philippine tarsier 36 36
No Yes Rattus norvegicus 49_34s (longest transcript per gene) Norway rat 60 60
No Yes Mus musculus 49_37b (longest transcript per gene) House mouse 53 53
No Yes Spermophilus tridecemlineatus 49_1e (longest transcript per gene) Thirteen-lined ground squirrel 41 41
No Yes Dipodomys ordii 51_1 (longest transcript per gene) Ord's kangaroo rat 49 49
No Yes Cavia porcellus 51_3 (longest transcript per gene) Domestic guinea pig 51 51
No Yes Oryctolagus cuniculus 49_1f (longest transcript per gene) Rabbit 46 46
No Yes Ochotona princeps 49_1 (longest transcript per gene) American pika 45 45
No Yes Tupaia belangeri 49_1d (longest transcript per gene) Northern tree shrew 43 43
No Yes Sus scrofa 56_9 (longest transcript per gene) Pig 43 43
No Yes Bos taurus 49_3f (longest transcript per gene) Cattle 53 53
No Yes Vicugna pacos 51_1 (longest transcript per gene) Alpaca 37 37
No Yes Tursiops truncatus 51_1 (longest transcript per gene) Bottlenosed dolphin 49 49
No Yes Canis familiaris 49_2g (longest transcript per gene) Dog 51 51
No Yes Felis catus 49_1c (longest transcript per gene) Domestic cat 43 43
No Yes Equus caballus 49_2 (longest transcript per gene) Horse 50 50
No Yes Myotis lucifugus 49_1e (longest transcript per gene) Little brown bat 50 50
No Yes Pteropus vampyrus 51_1 (longest transcript per gene) Large flying fox 50 50
No Yes Sorex araneus 49_1c (longest transcript per gene) European shrew 39 39
No Yes Erinaceus europaeus 49_1c (longest transcript per gene) Western European hedgehog 45 45
No Yes Procavia capensis 51_1 (longest transcript per gene) Cape rock hyrax 46 46
No Yes Loxodonta africana 49_1d (longest transcript per gene) African savanna elephant 38 38
No Yes Echinops telfairi 49_1e (longest transcript per gene) Small Madagascar hedgehog 57 57
No Yes Dasypus novemcinctus 49_1f (longest transcript per gene) Nine-banded armadillo 34 34
No Yes Macropus eugenii 55_1 (longest transcript per gene) Tammar wallaby 50 50
No Yes Monodelphis domestica 49_5d (longest transcript per gene) Gray short-tailed opossum 59 59
No Yes Ornithorhynchus anatinus 49_1f (longest transcript per gene) Platypus 44 44
No Yes Anolis carolinensis 55_1a (longest transcript per gene) Green anole 50 50
No Yes Taeniopygia guttata 57_1c (longest transcript per gene) Zebra finch 51 51
No Yes Meleagris gallopavo 57_2 (longest transcript per gene) Turkey 40 40
No Yes Gallus gallus 49_2g (longest transcript per gene) Chicken 38 38
No Yes Xenopus tropicalis 49_41i (longest transcript per gene) Western clawed frog 46 46
No Yes Danio rerio 49_7c (longest transcript per gene) Zebrafish 65 65
No Yes Gasterosteus aculeatus 49_1f (longest transcript per gene) Three-spined stickleback 60 60
No Yes Oryzias latipes 49_1e (longest transcript per gene) Japanese medaka 60 60
No Yes Tetraodon nigroviridis 49_1k (longest transcript per gene) Spotted green pufferfish 68 68
No Yes Takifugu rubripes 49_4i (longest transcript per gene) Torafugu 64 64
No Yes Ciona savignyi 49_2f (longest transcript per gene)   30 30
No Yes Ciona intestinalis 49_2i (longest transcript per gene)   29 29
No Yes Apis mellifera 37.2d (longest transcript per gene) (Not maintained) Honey bee 33 33
No Yes Drosophila melanogaster FlyBase 5.12 (longest transcript per gene) (FlyBase) Fruit fly 83 83
No Yes Drosophila melanogaster Ensembl 49_54 (longest transcript per gene) Fruit fly 49 49
No Yes Aedes aegypti 49_1b (longest transcript per gene) Yellow fever mosquito 41 41
No Yes Anopheles gambiae 49_3j (longest transcript per gene) African malaria mosquito 35 35
No Yes Caenorhabditis elegans WormBase WS194 (longest transcript per gene) (WormBase) Nematode 37 37
No Yes Caenorhabditis elegans Ensembl 49_180a (longest transcript per gene) Nematode 37 37
No Yes Arabidopsis thaliana 9 (longest transcript per gene) Thale cress 59 59
No Yes Oryza sativa ssp. japonica 5.0 (Not transposons) Japanese rice 88 88
No Yes NCBI viral sequences (Viral)   3 3
No Yes PDB chains (SCOP 1.73) (PDB)   1 1
No Yes TargetDB (Targets)   180 179
No Yes UniProt 15.0 (UniProt)   5589 5580
No Yes UniProt 15.0 viral sequences (Viral)   3 3

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