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Kelch motif superfamily domain assignments
in
Oryza brachyantha 22

Assignment details

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Oryza brachyantha 22 has 44 significant domains in 40 proteins.

     

Sequence ID   Evalue   Region   Family  
OB01G22390.1   1.44e-46   15-218   Kelch motif  
OB02G10910.1   1.57e-37   86-320   Kelch motif  
OB02G22460.1   2.09e-31   89-404   Kelch motif  
OB02G25500.1   3.4e-54   99-346   Kelch motif  
OB02G29020.1   1.29e-38   95-127,173-415   Kelch motif  
OB02G39470.1   1.03e-49   146-423   Kelch motif  
OB02G43150.1   0.00000000497   14-136   Kelch motif  
OB02G44590.1   1.57e-42   94-336   Kelch motif  
  0.0000000000144   23-78   Kelch motif  
OB03G15130.1   7.72e-44   150-391   Kelch motif  
OB03G15480.1   6.54e-51   199-472   Kelch motif  
OB03G20640.1   9.15e-23   19-133   Kelch motif  
OB03G35310.1   6.02e-40   83-373   Kelch motif  
OB03G37210.1   0.00000000000000798   2-78   Kelch motif  
OB03G47180.1   1.31e-41   242-476   Kelch motif  
OB03G47200.1   1.7e-51   78-330   Kelch motif  
OB04G17320.1   0.000000127   6-67   Kelch motif  
OB04G23770.1   1.57e-59   121-382,464-518   Kelch motif  
OB04G23830.1   0.00000000000101   81-158   Kelch motif  
OB04G24060.1   4.71e-36   88-340   Kelch motif  
  0.000000000484   306-395   Kelch motif  
OB04G32470.1   1.83e-48   171-423   Kelch motif  
OB05G12980.1   4.45e-38   8-294   Kelch motif  
OB05G14250.1   5.23e-65   731-1011   Kelch motif  
OB06G27620.1   1.57e-24   83-211   Kelch motif  
OB07G12560.1   1.31e-49   116-357   Kelch motif  
OB07G21940.1   2.09e-52   310-574   Kelch motif  
OB07G22990.1   0.0000314   129-289   Kelch motif  
OB07G23020.1   0.00000131   100-286   Kelch motif  
OB07G23300.1   8.63e-64   452-736   Kelch motif  
OB07G31430.1   2.22e-35   99-317   Kelch motif  
OB08G11980.1   7.19e-37   88-340   Kelch motif  
  0.000000000000366   304-394   Kelch motif  
OB08G16640.1   1.7e-40   40-323   Kelch motif  
OB09G11060.1   1.19e-55   3-246   Kelch motif  
OB10G15480.1   1.03e-35   68-259   Kelch motif  
  0.000000837   283-349   Kelch motif  
OB10G15720.1   5.36e-38   102-128,174-387   Kelch motif  
OB10G17230.1   6.28e-50   53-326   Kelch motif  
OB10G17470.1   4.84e-46   202-450   Kelch motif  
OB11G24630.1   3.14e-49   157-433   Kelch motif  
OB11G26350.1   3.34e-52   76-343   Kelch motif  
OB12G21930.1   8.5e-52   77-343   Kelch motif  
OB12G25910.1   5.49e-40   141-431   Kelch motif  
 
Weak hits:
OB01G19270.1   0.0248   60-155   Kelch motif  
OB02G16910.1   0.017   119-289   Kelch motif  
OB02G27460.1   0.0837   144-190   Kelch motif  
OB03G20690.1   0.0458   60-138   Kelch motif  
OB06G18680.1   0.00418   31-114   Kelch motif  
OB07G32540.1   0.0017   524-648   Kelch motif  
OB09G26640.1   0.0327   193-241   Kelch motif  
OB10G11390.1   0.0111   199-262   Kelch motif  
OB10G20990.1   0.00418   165-263,507-566   Kelch motif  

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Select to display   Genome       Domains   Proteins
No Yes ALL   195023 195023
No Yes Homo sapiens 76_38 Human 202 172
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 84 67
No Yes Gorilla gorilla 76_3.1 Western gorilla 103 86
No Yes Pongo abelii 76_2 Sumatran orangutan 81 71
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 73 65
No Yes Papio anubis 76 Olive baboon 79 66
No Yes Macaca mulatta 76_1 Rhesus monkey 130 112
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 150 128
No Yes Otolemur garnettii 76_3 Small-eared galago 82 68
No Yes Microcebus murinus 76_1 Gray mouse lemur 65 53
No Yes Rattus norvegicus 76_5.0 Norway rat 84 72
No Yes Mus musculus 76_38 House mouse 132 114
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 65 57
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 76 64
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 65 57
No Yes Cavia porcellus 76_3 Domestic guinea pig 77 66
No Yes Oryctolagus cuniculus 76_2 Rabbit 84 71
No Yes Ochotona princeps 76 American pika 74 58
No Yes Tupaia belangeri 76 Northern tree shrew 63 53
No Yes Sus scrofa 76_10.2 Pig 78 73
No Yes Bos taurus 76_3.1 Cattle 76 64
No Yes Ovis aries 76_3.1 Sheep 78 64
No Yes Vicugna pacos 76_1 Alpaca 58 46
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 71 61
No Yes Mustela putorius furo 76_1.0 Domestic ferret 79 67
No Yes Ailuropoda melanoleuca 76_1 Giant panda 78 70
No Yes Canis familiaris 76_3.1 Dog 84 70
No Yes Felis catus 76_6.2 Domestic cat 70 63
No Yes Equus caballus 76_2 Horse 73 66
No Yes Myotis lucifugus 76_2.0 Little brown bat 78 67
No Yes Pteropus vampyrus 76_1 Large flying fox 71 62
No Yes Sorex araneus 76_1 European shrew 59 51
No Yes Erinaceus europaeus 76 Western European hedgehog 69 56
No Yes Procavia capensis 76_1 Cape rock hyrax 66 54
No Yes Loxodonta africana 76_3 African savanna elephant 89 79
No Yes Echinops telfairi 76 Small Madagascar hedgehog 71 57
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 79 69
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 48 39
No Yes Macropus eugenii 76_1.0 Tammar wallaby 73 60
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 77 70
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 84 72
No Yes Ornithorhynchus anatinus 76_5 Platypus 78 70
No Yes Saccoglossus kowalevskii v3.0   125 103
No Yes Petromyzon marinus 76_7.0 Sea lamprey 50 41
No Yes Meleagris gallopavo 76_2 Turkey 72 63
No Yes Gallus gallus 76_4 Chicken 66 59
No Yes Anas platyrhynchos 76_1.0 Mallard 72 63
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 72 63
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 69 59
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 82 69
No Yes Anolis carolinensis 76_2.0 Green anole 84 75
No Yes Xenopus laevis African clawed frog 73 68
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 86 75
No Yes Latimeria chalumnae 76_1 Coelacanth 95 86
No Yes Lepisosteus oculatus 76 Spotted gar 103 90
No Yes Gadus morhua 76_1 Atlantic cod 94 80
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 107 91
No Yes Takifugu rubripes 76_4 Torafugu 229 210
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 120 108
No Yes Oryzias latipes 76_1 Japanese medaka 121 106
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 87 80
No Yes Poecilia formosa 76 Amazon molly 90 80
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 113 95
No Yes Astyanax mexicanus 76 Mexican tetra 97 85
No Yes Danio rerio 76_9 Zebrafish 136 122
No Yes Oikopleura dioica   161 151
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 85 70
No Yes Ciona intestinalis 76 Vase tunicate 69 63
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 58 55
No Yes Adineta vaga   228 182
No Yes Octopus bimaculoides 280   63 49
No Yes Crassostrea gigas 22 Pacific oyster 76 68
No Yes Lottia gigantea Owl limpet 58 52
No Yes Helobdella robusta   64 59
No Yes Capitella sp. I   267 248
No Yes Danaus plexippus OGS1.0 Monarch butterfly 25 18
No Yes Heliconius melpomene Postman butterfly 26 19
No Yes Bombyx mori Domestic silkworm 24 21
No Yes Nasonia vitripennis Jewel wasp 25 20
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 42 36
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 25 16
No Yes Linepithema humile v1.1 Argentine ant 21 16
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 28 24
No Yes Solenopsis invicta v.2.2.3 Red fire ant 23 19
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 18 13
No Yes Atta cephalotes v1.1   20 17
No Yes Camponotus floridanus v3.3 Florida carpenter ant 20 16
No Yes Lucilia cuprina Australian sheep blowfly 15 10
No Yes Drosophila grimshawi 1.3   30 26
No Yes Drosophila willistoni 1.3   20 15
No Yes Drosophila pseudoobscura 2.13   23 17
No Yes Drosophila persimilis 1.3   23 17
No Yes Drosophila suzukii   29 19
No Yes Drosophila yakuba 1.3   21 15
No Yes Drosophila simulans 1.3   18 14
No Yes Drosophila sechellia 1.3   27 22
No Yes Drosophila melanogaster 76_5 Fruit fly 50 39
No Yes Drosophila erecta 1.3   23 17
No Yes Drosophila ananassae 1.3   21 16
No Yes Drosophila virilis 1.2   22 16
No Yes Drosophila mojavensis 1.3   23 17
No Yes Megaselia scalaris 22   7 6
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 28 20
No Yes Culex pipiens quinquefasciatus Southern house mosquito 27 18
No Yes Anopheles darlingi 22 American malaria mosquito 11 10
No Yes Anopheles gambiae 49_3j African malaria mosquito 20 14
No Yes Tribolium castaneum 3.0 Red flour beetle 26 21
No Yes Pediculus humanus corporis (Early assembly) Human body louse 22 18
No Yes Acyrthosiphon pisum Pea aphid 111 90
No Yes Rhodnius prolixus 22   28 25
No Yes Daphnia pulex Common water flea 35 31
No Yes Strigamia maritima 22   63 54
No Yes Sarcoptes scabiei   17 13
No Yes Tetranychus urticae Two-spotted spider mite 22 21
No Yes Ixodes scapularis (Preliminary) Black-legged tick 44 37
No Yes Pristionchus pacificus   26 26
No Yes Meloidogyne incognita Southern root-knot nematode 16 15
No Yes Meloidogyne hapla   7 6
No Yes Onchocerca volvulus 22   17 13
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 32 25
No Yes Caenorhabditis japonica   15 12
No Yes Caenorhabditis brenneri   21 19
No Yes Caenorhabditis remanei   18 16
No Yes Caenorhabditis elegans 76_235 Roundworm 32 25
No Yes Caenorhabditis briggsae 2   14 12
No Yes Trichinella spiralis 22   14 12
No Yes Hymenolepis microstoma   39 35
No Yes Echinococcus multilocularis   21 20
No Yes Echinococcus granulosus   23 19
No Yes Taenia solium Pork tapeworm 26 22
No Yes Schistosoma mansoni   23 19
No Yes Mnemiopsis leidyi Sea walnut 46 40
No Yes Thelohanellus kitauei   145 132
No Yes Acropora digitifera v1.0   94 82
No Yes Nematostella vectensis 1.0 Starlet sea anemone 88 72
No Yes Hydra vulgaris   30 25
No Yes Amphimedon queenslandica   418 380
No Yes Trichoplax adhaerens   30 24
No Yes Proterospongia sp. ATCC 50818   45 32
No Yes Monosiga brevicollis   47 36
No Yes Sphaeroforma arctica JP610   13 11
No Yes Capsaspora owczarzaki ATCC 30864   15 13
No Yes Conidiobolus coronatus NRRL28638 v1.0   79 76
No Yes Mortierella verticillata NRRL 6337   70 65
No Yes Phycomyces blakesleeanus   45 41
No Yes Rhizopus oryzae RA 99-880   34 33
No Yes Mucor circinelloides   47 40
No Yes Rhizomucor miehei CAU432   31 30
No Yes Malassezia globosa CBS 7966   6 6
No Yes Sporisorium reilianum 22   9 6
No Yes Ustilago maydis   6 5
No Yes Mixia osmundae IAM 14324 v1.0   7 6
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   10 9
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   16 13
No Yes Melampsora laricis-populina   10 10
No Yes Rhodotorula graminis WP1 v1.0   9 8
No Yes Sporobolomyces roseus IAM 13481   6 6
No Yes Microbotryum violaceum 22   8 7
No Yes Wallemia sebi v1.0   5 5
No Yes Sphaerobolus stellatus v1.0   17 17
No Yes Piloderma croceum F 1598 v1.0   10 10
No Yes Serpula lacrymans var. lacrymans S7.9   5 4
No Yes Coniophora puteana   7 6
No Yes Hydnomerulius pinastri v2.0   8 6
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   9 7
No Yes Pisolithus microcarpus 441 v1.0   9 8
No Yes Pisolithus tinctorius Marx 270 v1.0   9 8
No Yes Scleroderma citrinum Foug A v1.0   9 9
No Yes Coprinopsis cinerea okayama7 130 v3   9 7
No Yes Pleurotus ostreatus Oyster mushroom 12 9
No Yes Amanita thiersii Skay4041 v1.0   7 6
No Yes Amanita muscaria Koide v1.0 Fly agaric 9 6
No Yes Galerina marginata v1.0   20 18
No Yes Hebeloma cylindrosporum h7 v2.0   10 9
No Yes Laccaria bicolor S238N-H82   13 13
No Yes Agaricus bisporus var. bisporus   12 8
No Yes Schizophyllum commune   7 6
No Yes Stereum hirsutum FP-91666 SS1 v1.0   11 9
No Yes Heterobasidion annosum   5 4
No Yes Gloeophyllum trabeumv1.0   9 9
No Yes Punctularia strigosozonata v1.0   7 7
No Yes Sebacina vermifera MAFF 305830 v1.0   7 6
No Yes Fomitiporia mediterranea v1.0   7 6
No Yes Tulasnella calospora AL13/4D v1.0   22 21
No Yes Postia placenta   12 12
No Yes Wolfiporia cocos MD-104 SS10 v1.0   8 8
No Yes Fomitopsis pinicolav1.0   8 7
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   8 7
No Yes Phanerochaete chrysosporium RP-78 2.1   9 8
No Yes Dichomitus squalens   11 10
No Yes Trametes versicolor v1.0   10 9
No Yes Tremella mesenterica Witches' butter 10 8
No Yes Daldinia eschscholzii EC12 v1.0   8 8
No Yes Apiospora montagnei NRRL 25634 v1.0   11 10
No Yes Magnaporthe poae ATCC 64411 22   3 3
No Yes Magnaporthe grisea 70-15   14 14
No Yes Podospora anserina   8 7
No Yes Sporotrichum thermophile ATCC 42464   9 9
No Yes Thielavia terrestris NRRL 8126   11 10
No Yes Chaetomium globosum CBS 148.51   9 9
No Yes Neurospora tetrasperma   12 12
No Yes Neurospora discreta FGSC 8579   11 11
No Yes Neurospora crassa OR74A   12 12
No Yes Cryphonectria parasitica Chestnut blight fungus 9 9
No Yes Verticillium albo-atrum VaMs.102   14 14
No Yes Verticillium dahliae VdLs.17   14 13
No Yes Acremonium alcalophilumv 1.0   7 7
No Yes Glomerella graminicola 22   13 11
No Yes Fusarium graminearum   13 12
No Yes Nectria haematococca mpVI   10 10
No Yes Fusarium oxysporum f. sp. lycopersici 4286   16 15
No Yes Fusarium verticillioides 7600   10 10
No Yes Trichoderma asperellum CBS 433.97 v1.0   10 8
No Yes Trichoderma atroviride   6 6
No Yes Trichoderma citrinoviride v1.0   9 8
No Yes Trichoderma reesei 1.2   8 8
No Yes Trichoderma virens Gv29-8   8 7
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   9 8
No Yes Trichoderma harzianum CBS 226.95 v1.0   9 8
No Yes Amorphotheca resinae v1.0 Creosote fungus 9 8
No Yes Botrytis cinerea B05.10   14 13
No Yes Sclerotinia sclerotiorum   10 10
No Yes Blumeria graminis 22   8 7
No Yes Didymella exigua CBS 183.55 v1.0   10 10
No Yes Leptosphaeria maculans 22   9 9
No Yes Setosphaeria turcica v1.0   10 10
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   8 8
No Yes Cochliobolus victoriae FI3 v1.0   8 8
No Yes Cochliobolus carbonum 26-R-13 v1.0   8 8
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 10 10
No Yes Alternaria brassicicola   11 10
No Yes Cochliobolus lunatus m118 v2.0   9 9
No Yes Pyrenophora teres f. teres 22   13 12
No Yes Pyrenophora tritici-repentis   8 7
No Yes Stagonospora nodorum   10 9
No Yes Mycosphaerella graminicola IPO323   10 9
No Yes Zasmidium cellare ATCC 36951 v1.0   12 12
No Yes Dothistroma septosporum   8 8
No Yes Septoria musiva v1.0   8 8
No Yes Mycosphaerella fijiensis CIRAD86   7 7
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   10 9
No Yes Paracoccidioides brasiliensis Pb18   6 6
No Yes Coccidioides posadasii RMSCC 3488   5 5
No Yes Coccidioides immitis RS   4 4
No Yes Ajellomyces dermatitidis SLH14081   8 7
No Yes Histoplasma capsulatum class NAmI strain WU24   7 7
No Yes Microsporum canis CBS 113480   5 5
No Yes Trichophyton equinum CBS 127.97   5 5
No Yes Trichophyton verrucosum HKI 0517   5 5
No Yes Arthroderma benhamiae CBS 112371   5 5
No Yes Trichophyton tonsurans CBS 112818   4 4
No Yes Trichophyton rubrum CBS 118892   5 5
No Yes Uncinocarpus reesii 1704   6 6
No Yes Aspergillus zonatus v1.0   6 6
No Yes Penicillium chrysogenum Wisconsin 54-1255   6 6
No Yes Penicillium chrysogenum v1.0   5 5
No Yes Aspergillus acidus v1.0   9 9
No Yes Aspergillus fumigatus Af293   7 6
No Yes Aspergillus brasiliensis v1.0   7 7
No Yes Aspergillus nidulans FGSC A4   7 7
No Yes Aspergillus sydowii v1.0   9 9
No Yes Aspergillus versicolor v1.0   9 8
No Yes Aspergillus glaucus   6 6
No Yes Aspergillus carbonarius ITEM 5010   6 5
No Yes Neosartorya fischeri NRRL 181   7 6
No Yes Aspergillus terreus NIH2624   10 8
No Yes Aspergillus tubingensis v1.0   8 7
No Yes Aspergillus wentii v1.0   9 8
No Yes Aspergillus oryzae RIB40   8 8
No Yes Aspergillus niger 22   7 7
No Yes Aspergillus niger ATCC 1015   6 5
No Yes Aspergillus flavus NRRL3357   7 7
No Yes Aspergillus clavatus NRRL 1   5 5
No Yes Penicillium marneffei ATCC 18224   8 8
No Yes Tuber melanosporum Mel28 22   5 5
No Yes Tuber melanosporum Vittad Perigord truffle 15 15
No Yes Hansenula polymorpha v2.0   4 4
No Yes Dekkera bruxellensis CBS 2499 v2.0   4 4
No Yes Pichia membranifaciensv1.0   7 6
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   5 5
No Yes Candida dubliniensis CD36   7 7
No Yes Candida tropicalis MYA-3404   7 7
No Yes Candida parapsilosis   4 4
No Yes Candida albicans SC5314   6 6
No Yes Lodderomyces elongisporus NRRL YB-4239   4 4
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   5 5
No Yes Pichia stipitis CBS 6054   3 3
No Yes Candida guilliermondii ATCC 6260   4 4
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   5 5
No Yes Debaromyces hansenii   7 7
No Yes Wickerhamomyces anomalus   6 6
No Yes Pichia pastoris GS115   4 4
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   4 4
No Yes Yarrowia lipolytica CLIB122   7 7
No Yes Candida lusitaniae ATCC 42720   4 4
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   3 3
No Yes Vanderwaltozyma polyspora DSM 70294   7 5
No Yes Candida glabrata CBS138   6 6
No Yes Kluyveromyces thermotolerans CBS 6340   3 3
No Yes Lachancea kluyveri   4 4
No Yes Kluyveromyces waltii   3 3
No Yes Ashbya gossypii ATCC 10895   5 4
No Yes Zygosaccharomyces rouxii   3 3
No Yes Saccharomyces mikatae MIT   7 6
No Yes Saccharomyces paradoxus MIT   7 6
No Yes Saccharomyces cerevisiae 76 Baker's yeast 8 6
No Yes Saccharomyces bayanus MIT   6 6
No Yes Kluyveromyces lactis   5 4
No Yes Schizosaccharomyces cryophilus OY26 22   3 3
No Yes Schizosaccharomyces octosporus yFS286   3 3
No Yes Schizosaccharomyces japonicus yFS275   4 3
No Yes Schizosaccharomyces pombe Fission yeast 3 3
No Yes Catenaria anguillulae PL171 v1.0   26 24
No Yes Allomyces macrogynus ATCC 38327   53 51
No Yes Spizellomyces punctatus DAOM BR117   21 17
No Yes Dictyostelium discoideum   38 27
No Yes Dictyostelium purpureum   29 25
No Yes Entamoeba dispar 1.2   2 2
No Yes Entamoeba invadens 1.2   2 2
No Yes Entamoeba histolytica 1   2 2
No Yes Selaginella moellendorffii   196 188
No Yes Pinus taeda Loblolly pine 156 144
No Yes Picea abies Norway spruce 110 106
No Yes Eucalyptus grandis v201 Rose gum 79 71
No Yes Theobroma cacao B97-61/B2 v1 Cacao 60 57
No Yes Gossypium raimondii v221   162 157
No Yes Citrus clementina v165   68 64
No Yes Citrus sinensis v154 Sweet orange 95 90
No Yes Thellungiella halophila v173   199 192
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 240 235
No Yes Capsella rubella v183   194 187
No Yes Arabidopsis lyrata Lyrate rockcress 218 208
No Yes Arabidopsis thaliana 10 Thale cress 171 163
No Yes Carica papaya Papaya 42 39
No Yes Medicago truncatula Barrel medic 91 86
No Yes Phaseolus vulgaris v186 French bean 67 61
No Yes Glycine max v109 Soybean 148 137
No Yes Cucumis sativus v122 Cucumber 70 65
No Yes Fragaria vesca Wild strawberry 100 97
No Yes Malus domestica v196 Apple 119 115
No Yes Prunus persica v139 Peach 54 51
No Yes Linum usitatissimum v200 Flax 78 70
No Yes Manihot esculenta v147 Cassava 71 69
No Yes Populus trichocarpa v156 Black cottonwood 84 79
No Yes Vitis vinifera Wine grape 48 46
No Yes Mimulus guttatus v140 Spotted monkey flower 52 50
No Yes Solanum lycopersicum v.2.3 Tomato 58 54
No Yes Solanum tuberosum Potato 88 83
No Yes Actinidia chinensis Hongyang   80 77
No Yes Aquilegia coerulea v195   109 95
No Yes Triticum urartu 22   45 43
No Yes Triticum aestivum 22 Bread wheat 157 148
No Yes Aegilops tauschii 22   51 49
No Yes Brachypodium distachyon Stiff brome 59 53
No Yes Oryza barthii 22 African wild rice 56 51
No Yes Oryza meridionalis 22   77 69
No Yes Oryza glumaepatula 22   70 65
No Yes Oryza glaberrima African rice 55 51
No Yes Oryza punctata 22   86 75
No Yes Oryza nivara 22   89 82
No Yes Oryza brachyantha 22 Malo sina 44 40
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 103 94
No Yes Oryza sativa v193 Rice 103 94
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 73 67
No Yes Panicum virgatum v202 Switchgrass 123 115
No Yes Setaria italica v164 Foxtail millet 64 61
No Yes Zea mays subsp. mays Maize 133 118
No Yes Zea mays v181 Maize 137 121
No Yes Sorghum bicolor Sorghum 58 54
No Yes Musa balbisiana Balbis banana 89 83
No Yes Musa acuminata 22 Wild Malaysian banana 79 75
No Yes Amborella trichopoda 22   57 55
No Yes Physcomitrella patens   129 125
No Yes Coccomyxa subellipsoidea sp. C-169 v2   22 17
No Yes Asterochloris sp. Cgr/DA1pho v1.0   13 10
No Yes Chlorella variabilis sp. NC64A   18 14
No Yes Chlorella vulgaris   23 19
No Yes Volvox carteri f. nagariensis   24 20
No Yes Volvox carteri v199   26 22
No Yes Chlamydomonas reinhardtii 4.0   27 23
No Yes Ostreococcus sp. RCC809   14 11
No Yes Ostreococcus lucimarinus CCE9901   15 12
No Yes Ostreococcus tauri   13 11
No Yes Bathycoccus prasinos   10 7
No Yes Micromonas sp. RCC299   17 15
No Yes Micromonas pusilla CCMP1545 v3.0   21 15
No Yes Cyanidioschyzon merolae strain 10D 22   23 20
No Yes Cyanidioschyzon merolae   22 20
No Yes Porphyridium purpureum 02_2012   7 5
No Yes Thecamonas trahens ATCC 50062   35 28
No Yes Bigelowiella natans CCMP2755 22   60 52
No Yes Giardia lamblia 2.3   12 11
No Yes Cyanophora paradoxa   104 94
No Yes Leishmania mexicana 2.4   18 15
No Yes Leishmania major strain Friedlin   17 15
No Yes Leishmania infantum JPCM5 2.4   17 15
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   17 13
No Yes Trypanosoma vivax   17 13
No Yes Trypanosoma cruzi strain CL Brener   15 13
No Yes Trypanosoma congolense 2.4   21 18
No Yes Trypanosoma brucei gambiense v4.1   21 17
No Yes Trypanosoma brucei TREU927 v4.1   20 17
No Yes Ectocarpus siliculosus   31 26
No Yes Aureococcus anophagefferens   25 22
No Yes Albugo laibachii 22   34 29
No Yes Pythium iwayamai DAOM BR242034 22   23 20
No Yes Pythium arrhenomanes ATCC 12531 22   22 21
No Yes Pythium ultimum v1.7-2   27 21
No Yes Pythium aphanidermatum DAOM BR444 22   21 18
No Yes Pythium irregulare DAOM BR486 22   28 20
No Yes Pythium vexans DAOM BR484 22   25 21
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 18 17
No Yes Phytophthora sojae 1.1   23 17
No Yes Phytophthora infestans T30-4   32 27
No Yes Phytophthora capsici   26 20
No Yes Hyaloperonospora arabidopsidis 22   11 8
No Yes Phaeodactylum tricornutumCCAP 1055/1   9 7
No Yes Fragilariopsis cylindrus   24 19
No Yes Thalassiosira pseudonana CCMP1335   20 14
No Yes Perkinsus marinus ATCC 50983   37 27
No Yes Paramecium tetraurelia   140 118
No Yes Tetrahymena thermophila SB210 1   74 63
No Yes Ichthyophthirius multifiliis strain G5   41 39
No Yes Cryptosporidium hominis   5 4
No Yes Cryptosporidium muris   9 6
No Yes Cryptosporidium parvum Iowa II   7 5
No Yes Neospora caninum   14 12
No Yes Toxoplasma gondii VEG   13 9
No Yes Toxoplasma gondii ME49   15 11
No Yes Toxoplasma gondii GT1   16 12
No Yes Babesia bovis T2Bo   14 12
No Yes Theileria parva   9 8
No Yes Theileria annulata   10 7
No Yes Plasmodium falciparum 3D7   10 9
No Yes Plasmodium vivax SaI-1 7.0   15 12
No Yes Plasmodium knowlesi strain H   13 10
No Yes Plasmodium yoelii ssp. yoelii 1   15 12
No Yes Plasmodium chabaudi   12 10
No Yes Plasmodium berghei ANKA   11 9
No Yes Symbiodinium minutum clade B1 v1.2   133 105
No Yes Naegleria gruberi   72 66
No Yes Trichomonas vaginalis   43 43
No Yes Guillardia theta CCMP2712 v1.0   89 63
No Yes Emiliania huxleyi CCMP1516   61 55
No Yes Thermobaculum terrenum ATCC BAA-798   1 1
No Yes Gloeocapsa sp. PCC 7428   1 1
No Yes Gloeobacter violaceus PCC 7421   4 4
No Yes Conexibacter woesei DSM 14684   2 1
No Yes Eggerthella sp. YY7918   1 1
No Yes Eggerthella lenta DSM 2243   1 1
No Yes Acidothermus cellulolyticus 11B   2 1
No Yes Kineococcus radiotolerans SRS30216   1 1
No Yes Catenulispora acidiphila DSM 44928   1 1
No Yes Stackebrandtia nassauensis DSM 44728   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   1 1
No Yes Actinosynnema mirum DSM 43827   2 1
No Yes Kribbella flavida DSM 17836   2 2
No Yes Salinispora arenicola CNS-205   1 1
No Yes Salinispora tropica CNB-440   1 1
No Yes Verrucosispora maris AB-18-032   1 1
No Yes Micromonospora sp. L5   1 1
No Yes Micromonospora aurantiaca ATCC 27029   1 1
No Yes Actinoplanes sp. N902-109   1 1
No Yes Rhodococcus jostii RHA1   2 1
No Yes Rhodococcus opacus B4   2 1
No Yes Amycolicicoccus subflavus DQS3-9A1   3 1
No Yes Mycobacterium sp. JLS   1 1
No Yes Mycobacterium intracellulare ATCC 13950   3 1
No Yes Mycobacterium vanbaalenii PYR-1   1 1
No Yes Mycobacterium rhodesiae NBB3   1 1
No Yes Mycobacterium chubuense NBB4   3 1
No Yes Anaerolinea thermophila UNI-1   2 1
No Yes Sphaerobacter thermophilus DSM 20745   1 1
No Yes Herpetosiphon aurantiacus DSM 785   7 6
No Yes Roseiflexus sp. RS-1   3 2
No Yes Roseiflexus castenholzii DSM 13941   1 1
No Yes Chloroflexus sp. MS-G   3 3
No Yes Chloroflexus sp. Y-400-fl   4 3
No Yes Chloroflexus aggregans DSM 9485   2 2
No Yes Chloroflexus aurantiacus J-10-fl   4 3
No Yes Truepera radiovictrix DSM 17093   2 2
No Yes Deinococcus deserti VCD115   2 1
No Yes Deinococcus geothermalis DSM 11300   1 1
No Yes Meiothermus silvanus DSM 9946   1 1
No Yes Megamonas hypermegale   1 1
No Yes Clostridium clariflavum DSM 19732   2 2
No Yes Clostridium cellulolyticum H10   4 2
No Yes Sulfobacillus acidophilus DSM 10332   1 1
No Yes Syntrophobotulus glycolicus DSM 8271   1 1
No Yes Desulfotomaculum kuznetsovii DSM 6115   2 2
No Yes Eubacterium limosum KIST612   5 5
No Yes Clostridium sp. BNL1100   3 3
No Yes Clostridium perfringens ATCC 13124   1 1
No Yes Clostridium cellulovorans 743B   9 5
No Yes Clostridium botulinum A str. ATCC 3502   1 1
No Yes Mahella australiensis 50-1 BON   1 1
No Yes Streptococcus pneumoniae P1031   1 1
No Yes Paenibacillus sp. JDR-2   1 1
No Yes Paenibacillus mucilaginosus 3016   1 1
No Yes Bacillus amyloliquefaciens FZB42   2 1
No Yes Gemmatimonas aurantiaca T-27   1 1
No Yes Melioribacter roseus P3M   1 1
No Yes Ignavibacterium album JCM 16511   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   4 4
No Yes Niastella koreensis GR20-10   3 3
No Yes Chitinophaga pinensis DSM 2588   3 2
No Yes Rhodothermus marinus DSM 4252   1 1
No Yes Belliella baltica DSM 15883   1 1
No Yes Cyclobacterium marinum DSM 745   5 5
No Yes Fibrella aestuarina   3 3
No Yes Leadbetterella byssophila DSM 17132   2 2
No Yes Dyadobacter fermentans DSM 18053   5 5
No Yes Cytophaga hutchinsonii ATCC 33406   4 2
No Yes Spirosoma linguale DSM 74   4 4
No Yes Parabacteroides distasonis ATCC 8503   4 3
No Yes Tannerella forsythia ATCC 43037   2 2
No Yes Paludibacter propionicigenes WB4   3 3
No Yes Odoribacter splanchnicus DSM 20712   5 4
No Yes Bacteroides sp. CF50   2 1
No Yes Prevotella melaninogenica ATCC 25845   1 1
No Yes Prevotella denticola F0289   1 1
No Yes Prevotella ruminicola 23   1 1
No Yes Bacteroides salanitronis DSM 18170   1 1
No Yes Bacteroides helcogenes P 36-108   2 2
No Yes Bacteroides vulgatus ATCC 8482   1 1
No Yes Bacteroides thetaiotaomicron VPI-5482   1 1
No Yes Bacteroides fragilis YCH46   8 8
No Yes Pedobacter saltans DSM 12145   1 1
No Yes Pedobacter heparinus DSM 2366   4 4
No Yes Sphingobacterium sp. 21   3 2
No Yes Fluviicola taffensis DSM 16823   1 1
No Yes Owenweeksia hongkongensis DSM 17368   3 3
No Yes Maribacter sp. HTCC2170   5 4
No Yes Robiginitalea biformata HTCC2501   3 3
No Yes Aequorivita sublithincola DSM 14238   1 1
No Yes Zobellia galactanivorans   5 5
No Yes Muricauda ruestringensis DSM 13258   4 4
No Yes Cellulophaga algicola DSM 14237   1 1
No Yes Cellulophaga lytica DSM 7489   1 1
No Yes Ornithobacterium rhinotracheale DSM 15997   1 1
No Yes Capnocytophaga canimorsus Cc5   1 1
No Yes Capnocytophaga ochracea DSM 7271   1 1
No Yes Flavobacterium johnsoniae UW101   2 2
No Yes Phycisphaera mikurensis NBRC 102666   2 2
No Yes Isosphaera pallida ATCC 43644   1 1
No Yes Planctomyces brasiliensis DSM 5305   4 2
No Yes Planctomyces limnophilus DSM 3776   1 1
No Yes Rhodopirellula baltica SH 1   3 3
No Yes Pirellula staleyi DSM 6068   6 3
No Yes Opitutus terrae PB90-1   3 2
No Yes Akkermansia muciniphila ATCC BAA-835   2 2
No Yes Turneriella parva DSM 21527   2 1
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. L550   2 1
No Yes Leptospira interrogans serovar Lai str. IPAV   4 4
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   4 3
No Yes Brachyspira murdochii DSM 12563   1 1
No Yes Brachyspira intermedia PWS/A   1 1
No Yes Brachyspira pilosicoli 95/1000   1 1
No Yes Brachyspira hyodysenteriae WA1   1 1
No Yes Candidatus Chloracidobacterium thermophilum B   3 1
No Yes Candidatus Solibacter usitatus Ellin6076   2 1
No Yes Granulicella mallensis MP5ACTX8   1 1
No Yes Candidatus Koribacter versatilis Ellin345   8 5
No Yes Terriglobus roseus DSM 18391   1 1
No Yes Fusobacterium nucleatum subsp. nucleatum ATCC 25586   1 1
No Yes candidate division WWE3 bacterium RAAC2_WWE3_1   2 1
No Yes Candidatus Saccharimonas aalborgensis   5 1
No Yes Desulfatibacillum alkenivorans AK-01   2 2
No Yes Geobacter daltonii FRC-32   2 1
No Yes Haliangium ochraceum DSM 14365   4 3
No Yes Sorangium cellulosum 'So ce 56'   11 9
No Yes Stigmatella aurantiaca DW4/3-1   15 10
No Yes Corallococcus coralloides DSM 2259   20 12
No Yes Myxococcus xanthus DK 1622   7 4
No Yes Myxococcus fulvus HW-1   3 2
No Yes Thauera sp. MZ1T   1 1
No Yes Azoarcus sp. BH72   1 1
No Yes Cupriavidus necator N-1   1 1
No Yes Ramlibacter tataouinensis TTB310   1 1
No Yes Variovorax paradoxus S110   1 1
No Yes Acidovorax citrulli AAC00-1   1 1
No Yes Acidovorax avenae subsp. avenae ATCC 19860   3 2
No Yes Nitrosomonas sp. Is79A3   1 1
No Yes Sideroxydans lithotrophicus ES-1   2 1
No Yes Caulobacter sp. K31   1 1
No Yes Hyphomonas neptunium ATCC 15444   2 1
No Yes Azospirillum brasilense Sp245   2 2
No Yes Methylobacterium chloromethanicum CM4   1 1
No Yes Methylobacterium extorquens AM1   1 1
No Yes Methylobacterium populi BJ001   1 1
No Yes Parvibaculum lavamentivorans DS-1   2 1
No Yes Brucella microti CCM 4915   1 1
No Yes Brucella pinnipedialis B2/94   1 1
No Yes Brucella canis ATCC 23365   1 1
No Yes Brucella suis ATCC 23445   1 1
No Yes Brucella melitensis ATCC 23457   1 1
No Yes Brucella ovis ATCC 25840   1 1
No Yes Brucella abortus S19   1 1
No Yes Pelagibacterium halotolerans B2   1 1
No Yes Aggregatibacter aphrophilus NJ8700   1 1
No Yes Aggregatibacter actinomycetemcomitans D7S-1   1 1
No Yes Gallibacterium anatis UMN179   1 1
No Yes Pasteurella multocida subsp. multocida str. 3480   1 1
No Yes Haemophilus influenzae PittEE   1 1
No Yes Vibrio vulnificus MO6-24/O   1 1
No Yes Vibrio cholerae O395   3 2
No Yes Psychromonas sp. CNPT3   1 1
No Yes Ferrimonas balearica DSM 9799   1 1
No Yes Shewanella piezotolerans WP3   2 2
No Yes Shewanella loihica PV-4   2 1
No Yes Shewanella denitrificans OS217   1 1
No Yes Shewanella pealeana ATCC 700345   2 2
No Yes Shewanella woodyi ATCC 51908   1 1
No Yes Shewanella frigidimarina NCIMB 400   2 1
No Yes Colwellia psychrerythraea 34H   1 1
No Yes Pseudoalteromonas atlantica T6c   2 2
No Yes Pseudoalteromonas haloplanktis TAC125   1 1
No Yes Glaciecola sp. 4H-3-7+YE-5   1 1
No Yes Alteromonas sp. SN2   1 1
No Yes Alteromonas macleodii str. 'Deep ecotype'   1 1
No Yes Kangiella koreensis DSM 16069   2 1
No Yes Hahella chejuensis KCTC 2396   1 1
No Yes Methylomicrobium alcaliphilum   2 2
No Yes Pseudoxanthomonas suwonensis 11-1   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   1 1
No Yes Xanthomonas campestris pv. campestris str. B100   1 1
No Yes Nitrosococcus watsonii C-113   1 1
No Yes Nitrosococcus halophilus Nc4   1 1
No Yes Nitrosococcus oceani ATCC 19707   1 1
No Yes Yersinia pseudotuberculosis IP 31758   1 1
No Yes Yersinia pestis Pestoides F   1 1
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   1 1
No Yes Shigella sonnei Ss046   1 1
No Yes Shigella flexneri 5 str. 8401   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   1 1
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   1 1
No Yes Candidatus Caldiarchaeum subterraneum   1 1
No Yes Nitrosopumilus maritimus SCM1   4 2
No Yes Sulfolobus islandicus Y.N.15.51   1 1
No Yes Sulfolobus solfataricus P2   1 1
No Yes Sulfolobus acidocaldarius DSM 639   1 1
No Yes Methanosphaerula palustris E1-9c   2 1
No Yes Methanoculleus bourgensis MS2   1 1
No Yes Archaeoglobus fulgidus DSM 4304   1 1
No Yes Pyrococcus furiosus COM1   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 118 103
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 44 33
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 20 14
No Yes Ascaris suum Victoria/Ghent Pig roundworm 17 14
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 27 21
No Yes Cryptococcus neoformans var. grubii H99   3 2
No Yes Cryptococcus neoformans B-3501A   5 4
No Yes Cryptococcus neoformans JEC21   5 4
No Yes Paracoccidioides brasiliensis Pb01   7 7
No Yes Paracoccidioides brasiliensis Pb03   6 6
No Yes Coccidioides posadasii str. Silveira   5 5
No Yes Coccidioides immitis RMSCC 3703   5 5
No Yes Coccidioides immitis RMSCC 2394   6 6
No Yes Coccidioides immitis H538.4   5 5
No Yes Ajellomyces dermatitidis ER-3   6 6
No Yes Histoplasma capsulatum H143   9 8
No Yes Histoplasma capsulatum H88   9 8
No Yes Histoplasma capsulatum G186AR   8 8
No Yes Aspergillus fumigatus A1163   7 6
No Yes Candida albicans WO-1   4 4
No Yes Saccharomyces cerevisiae UC5   7 6
No Yes Saccharomyces cerevisiae PW5   4 4
No Yes Saccharomyces cerevisiae FL100   4 2
No Yes Saccharomyces cerevisiae CLIB324   3 3
No Yes Saccharomyces cerevisiae CBS7960   6 5
No Yes Saccharomyces cerevisiae YJM269   7 6
No Yes Saccharomyces cerevisiae T7   8 7
No Yes Saccharomyces cerevisiae FostersB   4 3
No Yes Saccharomyces cerevisiae FostersO   4 4
No Yes Saccharomyces cerevisiae VL3   6 5
No Yes Saccharomyces cerevisiae Vin13   5 5
No Yes Saccharomyces cerevisiae LalvinQA23   5 4
No Yes Saccharomyces cerevisiae AWRI796   6 6
No Yes Saccharomyces cerevisiae Sigma1278b   8 6
No Yes Saccharomyces cerevisiae W303   8 6
No Yes Saccharomyces cerevisiae JAY291   9 7
No Yes Saccharomyces cerevisiae AWRI1631   5 4
No Yes Saccharomyces cerevisiae YPS163   3 2
No Yes Saccharomyces cerevisiae T73   2 2
No Yes Saccharomyces cerevisiae CLIB215   7 6
No Yes Saccharomyces cerevisiae Y10   3 3
No Yes Saccharomyces cerevisiae YJM789   8 6
No Yes Saccharomyces cerevisiae YJM789   8 6
No Yes Saccharomyces cerevisiae RM11-1a   8 6
No Yes Saccharomyces cerevisiae RM11-1a   8 6
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 8 6
No Yes Schizosaccharomyces pombe 972h-   3 3
No Yes Batrachochytrium dendrobatidis JEL423   10 9
No Yes Batrachochytrium dendrobatidis JAM81   10 9
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 55 52
No Yes Hordeum vulgare 22 Domesticated barley 113 112
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 55 51
No Yes Trypanosoma brucei Lister 427 v4.1   21 17
No Yes Neospora caninum Nc-Liverpool 6.2   14 12
No Yes Plasmodium falciparum HB3   10 9
No Yes Plasmodium falciparum Dd2   12 10
No Yes Crinalium epipsammum PCC 9333   1 1
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   1 1
No Yes Frankia sp. CcI3   1 1
No Yes Streptomyces venezuelae ATCC 10712   2 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   1 1
No Yes Actinoplanes friuliensis DSM 7358   2 2
No Yes Mycobacterium sp. MOTT36Y   3 1
No Yes Mycobacterium sp. KMS   3 1
No Yes Mycobacterium sp. MCS   3 1
No Yes Mycobacterium yongonense 05-1390   3 1
No Yes Mycobacterium intracellulare MOTT-64   1 1
No Yes Mycobacterium indicus pranii MTCC 9506   2 1
No Yes Mycobacterium intracellulare MOTT-02   1 1
No Yes Mycobacterium kansasii ATCC 12478   3 1
No Yes Deinococcus peraridilitoris DSM 19664   3 3
No Yes Clostridium thermocellum DSM 1313   1 1
No Yes Sulfobacillus acidophilus TPY   1 1
No Yes Clostridium autoethanogenum DSM 10061   1 1
No Yes Clostridium perfringens str. 13   1 1
No Yes Clostridium botulinum H04402 065   2 2
No Yes Clostridium botulinum F str. 230613   2 1
No Yes Clostridium botulinum F str. Langeland   3 2
No Yes Clostridium botulinum B1 str. Okra   2 2
No Yes Clostridium botulinum Ba4 str. 657   3 2
No Yes Clostridium botulinum A2 str. Kyoto   3 2
No Yes Clostridium botulinum A3 str. Loch Maree   2 2
No Yes Clostridium botulinum A str. Hall   3 2
No Yes Clostridium botulinum A str. ATCC 19397   2 1
No Yes Streptococcus pneumoniae gamPNI0373   1 1
No Yes Streptococcus pneumoniae D39   1 1
No Yes Streptococcus pneumoniae R6   1 1
No Yes Paenibacillus sp. Y412MC10   2 1
No Yes Paenibacillus mucilaginosus KNP414   1 1
No Yes Paenibacillus mucilaginosus K02   1 1
No Yes Paenibacillus larvae subsp. larvae DSM 25430   1 1
No Yes Paenibacillus polymyxa CR1   4 3
No Yes Paenibacillus polymyxa E681   2 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   2 1
No Yes Bacillus amyloliquefaciens CC178   2 1
No Yes Bacillus amyloliquefaciens XH7   2 1
No Yes Bacillus amyloliquefaciens TA208   2 1
No Yes Bacillus amyloliquefaciens DSM 7   2 1
No Yes Rhodothermus marinus SG0.5JP17-172   2 2
No Yes Echinicola vietnamensis DSM 17526   2 2
No Yes Emticicia oligotrophica DSM 17448   1 1
No Yes Prevotella sp. oral taxon 299 str. F0039   1 1
No Yes Prevotella dentalis DSM 3688   1 1
No Yes Bacteroides xylanisolvens XB1A   2 2
No Yes Bacteroides fragilis 638R   5 5
No Yes Bacteroides fragilis NCTC 9343   7 7
No Yes Nonlabens dokdonensis DSW-6   5 3
No Yes Singulisphaera acidiphila DSM 18658   4 3
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. JB197   2 2
No Yes Leptospira interrogans serovar Lai str. 56601   4 4
No Yes Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130   2 2
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'   4 3
No Yes Brachyspira pilosicoli WesB   1 1
No Yes Brachyspira pilosicoli B2904   1 1
No Yes Brachyspira pilosicoli P43/6/78   1 1
No Yes Leptospirillum ferriphilum ML-04   1 1
No Yes Fusobacterium nucleatum subsp. vincentii 3_1_36A2   1 1
No Yes Sorangium cellulosum So0157-2   17 10
No Yes Anaeromyxobacter dehalogenans 2CP-C   2 1
No Yes Myxococcus stipitatus DSM 14675   15 7
No Yes Ralstonia solanacearum PSI07   1 1
No Yes Burkholderia thailandensis MSMB121   1 1
No Yes Variovorax paradoxus B4   1 1
No Yes Variovorax paradoxus EPS   2 1
No Yes Nitrosomonas sp. AL212   3 3
No Yes Wolbachia endosymbiont of Drosophila simulans wNo   2 1
No Yes Methylobacterium extorquens DM4   1 1
No Yes Methylobacterium extorquens PA1   1 1
No Yes Brucella ceti TE10759-12   1 1
No Yes Brucella canis HSK A52141   1 1
No Yes Brucella melitensis NI   1 1
No Yes Brucella melitensis M5-90   1 1
No Yes Brucella melitensis M28   1 1
No Yes Brucella melitensis bv. 1 str. 16M   1 1
No Yes Brucella abortus A13334   1 1
No Yes Brucella melitensis biovar Abortus 2308   1 1
No Yes Brucella abortus bv. 1 str. 9-941   1 1
No Yes Aggregatibacter actinomycetemcomitans ANH9381   1 1
No Yes Aggregatibacter actinomycetemcomitans D11S-1   1 1
No Yes Pasteurella multocida 36950   1 1
No Yes Pasteurella multocida subsp. multocida str. HN06   1 1
No Yes Pasteurella multocida subsp. multocida str. Pm70   1 1
No Yes Haemophilus influenzae KR494   1 1
No Yes Haemophilus influenzae F3047   1 1
No Yes Haemophilus influenzae F3031   1 1
No Yes Haemophilus influenzae 10810   1 1
No Yes Haemophilus influenzae PittGG   1 1
No Yes Haemophilus influenzae 86-028NP   1 1
No Yes Haemophilus influenzae R2866   1 1
No Yes Haemophilus influenzae R2846   1 1
No Yes Haemophilus influenzae Rd KW20   1 1
No Yes Vibrio sp. EJY3   1 1
No Yes Vibrio vulnificus YJ016   1 1
No Yes Vibrio cholerae LMA3984-4   3 2
No Yes Vibrio cholerae M66-2   3 2
No Yes Vibrio cholerae O395   3 2
No Yes Vibrio cholerae IEC224   3 2
No Yes Vibrio cholerae O1 str. 2010EL-1786   3 2
No Yes Vibrio cholerae MJ-1236   3 2
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   3 2
No Yes Alteromonas macleodii str. 'Ionian Sea UM4b'   3 3
No Yes Alteromonas macleodii str. 'Ionian Sea UM7'   3 3
No Yes Alteromonas macleodii str. 'Ionian Sea U8'   3 3
No Yes Alteromonas macleodii str. 'Ionian Sea U7'   3 3
No Yes Alteromonas macleodii str. 'Ionian Sea U4'   3 3
No Yes Alteromonas macleodii str. 'Aegean Sea MED64'   2 2
No Yes Alteromonas macleodii str. 'English Channel 615'   2 2
No Yes Alteromonas macleodii AltDE1   3 3
No Yes Alteromonas macleodii str. 'English Channel 673'   1 1
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   2 2
No Yes Alteromonas macleodii str. 'Black Sea 11'   1 1
No Yes Alteromonas macleodii ATCC 27126   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   1 1
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   1 1
No Yes Xanthomonas axonopodis pv. citrumelo F1   1 1
No Yes Xanthomonas axonopodis Xac29-1   1 1
No Yes Xanthomonas campestris pv. raphani 756C   1 1
No Yes Xanthomonas campestris pv. campestris str. 8004   1 1
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   1 1
No Yes Morganella morganii subsp. morganii KT   1 1
No Yes Yersinia pseudotuberculosis PB1/+   1 1
No Yes Yersinia pseudotuberculosis YPIII   1 1
No Yes Yersinia pseudotuberculosis IP 32953   1 1
No Yes Yersinia pestis biovar Microtus str. 91001   1 1
No Yes Yersinia pestis A1122   1 1
No Yes Yersinia pestis Z176003   1 1
No Yes Yersinia pestis D182038   1 1
No Yes Yersinia pestis D106004   1 1
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   1 1
No Yes Yersinia pestis Nepal516   1 1
No Yes Yersinia pestis Antiqua   1 1
No Yes Yersinia pestis Angola   1 1
No Yes Yersinia pestis CO92   1 1
No Yes Yersinia pestis KIM10+   1 1
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   1 1
No Yes Yersinia enterocolitica subsp. palearctica Y11   1 1
No Yes Shigella sonnei 53G   1 1
No Yes Shigella flexneri 2002017   1 1
No Yes Shigella flexneri 2a str. 2457T   1 1
No Yes Shigella flexneri 2a str. 301   1 1
No Yes Shigella boydii Sb227   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   2 1
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   1 1
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   1 1
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   1 1
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   1 1
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   1 1
No Yes Salmonella enterica serovar Bovismorbificans genomics   1 1
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   1 1
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   2 2
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   1 1
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   1 1
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   1 1
No Yes Escherichia coli E24377A   1 1
No Yes Escherichia coli E. coli PMV-1   1 1
No Yes Escherichia coli JJ1886   2 2
No Yes Escherichia coli LY180   1 1
No Yes Escherichia coli APEC O78   1 1
No Yes Escherichia coli O7:K1 str. CE10   1 1
No Yes Escherichia coli NA114   1 1
No Yes Escherichia coli str. 'clone D i2'   2 2
No Yes Escherichia coli str. 'clone D i14'   2 2
No Yes Escherichia coli UM146   1 1
No Yes Escherichia coli 042   1 1
No Yes Escherichia coli Xuzhou21   1 1
No Yes Escherichia coli IHE3034   1 1
No Yes Escherichia coli O83:H1 str. NRG 857C   1 1
No Yes Escherichia coli ABU 83972   2 2
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli LF82   1 1
No Yes Escherichia coli ED1a   2 2
No Yes Escherichia coli IAI39   1 1
No Yes Escherichia coli UMN026   2 2
No Yes Escherichia coli S88   1 1
No Yes Escherichia coli IAI1   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli SMS-3-5   1 1
No Yes Escherichia coli SE15   1 1
No Yes Escherichia coli SE11   1 1
No Yes Escherichia coli APEC O1   1 1
No Yes Escherichia coli O103:H2 str. 12009   1 1
No Yes Escherichia coli UTI89   1 1
No Yes Escherichia coli 536   1 1
No Yes Escherichia coli HS   1 1
No Yes Escherichia coli ETEC H10407   1 1
No Yes Escherichia coli O55:H7 str. RM12579   1 1
No Yes Escherichia coli O55:H7 str. CB9615   1 1
No Yes Escherichia coli O26:H11 str. 11368   1 1
No Yes Escherichia coli CFT073   2 2
No Yes Escherichia coli O111:H- str. 11128   1 1
No Yes Escherichia coli O127:H6 str. E2348/69   1 1
No Yes Escherichia coli O157:H7 str. TW14359   1 1
No Yes Escherichia coli O157:H7 str. EC4115   1 1
No Yes Escherichia coli O157:H7 str. Sakai   1 1
No Yes Escherichia coli O157:H7 str. EDL933   1 1
No Yes Escherichia coli BW2952   1 1
No Yes Escherichia coli str. K-12 substr. MG1655   1 1
No Yes Escherichia coli str. K-12 substr. W3110   1 1
No Yes Escherichia coli str. K-12 substr. DH10B   1 1
No Yes Escherichia coli B str. REL606   1 1
No Yes Pseudomonas fluorescens Pf0-1   2 2
No Yes Sulfolobus islandicus LAL14/1   2 1
No Yes Sulfolobus islandicus REY15A   2 1
No Yes Sulfolobus islandicus HVE10/4   1 1
No Yes Sulfolobus islandicus Y.G.57.14   2 1
No Yes Sulfolobus islandicus L.S.2.15   1 1
No Yes Sulfolobus islandicus M.16.27   1 1
No Yes Sulfolobus islandicus M.14.25   1 1
No Yes Sulfolobus islandicus M.16.4   1 1
No Yes Sulfolobus islandicus L.D.8.5   1 1
No Yes Sulfolobus solfataricus 98/2   1 1
No Yes Methanolobus psychrophilus R15   3 3
No Yes Methanoregula formicica Methanoregula formicicum SMSP   1 1
No Yes Pyrococcus sp. NA2   1 1
No Yes Pyrococcus furiosus DSM 3638   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 224 190
No Yes Homo sapiens (NCBI version) Human 111 92
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 76 66
No Yes Heliconius numata (Incomplete)   4 4
No Yes Loa loa v3.3 (Request) Eye worm 22 18
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 28 26
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 19 15
No Yes Moniliophthora perniciosa FA553 (Genome survey)   3 3
No Yes Encephalitozoon intestinalis (endoparasite)   1 1
No Yes Encephalitozoon cuniculi (endoparasite)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 7 7
No Yes Lotus japonicus (Early assembly)   51 49
No Yes Malus x domestica (Duplicate) Apple 119 115
No Yes Ricinus communis (Early assembly) Castor bean 48 48
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   118 115
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 57 53
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 58 54
No Yes Phoenix dactylifera (Early draft) Date palm 35 32
No Yes Homo sapiens 69_37 Human 84 69
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 84 67
No Yes Gorilla gorilla 69_3.1 Western gorilla 77 65
No Yes Pongo abelii 69_2 Sumatran orangutan 79 69
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 64 57
No Yes Macaca mulatta 69_1 Rhesus monkey 76 64
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 80 67
No Yes Otolemur garnettii 69_3 Small-eared galago 81 67
No Yes Microcebus murinus 69_1 Gray mouse lemur 65 53
No Yes Rattus norvegicus 69_3.4 Norway rat 71 61
No Yes Mus musculus 69_38 House mouse 78 68
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 65 57
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 75 63
No Yes Cavia porcellus 69_3 Domestic guinea pig 77 66
No Yes Oryctolagus cuniculus 69_2 Rabbit 81 68
No Yes Ochotona princeps 69 American pika 74 58
No Yes Tupaia belangeri 69 Northern tree shrew 63 53
No Yes Sus scrofa 69_10.2 Pig 73 68
No Yes Bos taurus 69_3.1 Cattle 73 62
No Yes Vicugna pacos 69_1 Alpaca 58 46
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 71 61
No Yes Mustela putorius furo 69_1.0 Domestic ferret 79 67
No Yes Ailuropoda melanoleuca 69_1 Giant panda 71 63
No Yes Canis familiaris 69_3.1 Dog 76 63
No Yes Felis catus 69 Domestic cat 61 50
No Yes Equus caballus 69_2 Horse 70 63
No Yes Myotis lucifugus 69_2.0 Little brown bat 78 67
No Yes Pteropus vampyrus 69_1 Large flying fox 71 62
No Yes Sorex araneus 69_1 European shrew 59 51
No Yes Erinaceus europaeus 69 Western European hedgehog 69 56
No Yes Procavia capensis 69_1 Cape rock hyrax 66 54
No Yes Loxodonta africana 69_3 African savanna elephant 73 64
No Yes Echinops telfairi 69 Small Madagascar hedgehog 71 57
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 58 49
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 48 39
No Yes Macropus eugenii 69_1.0 Tammar wallaby 73 60
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 68 61
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 80 69
No Yes Ornithorhynchus anatinus 69_5 Platypus 72 64
No Yes Petromyzon marinus 69_7.0 Sea lamprey 46 38
No Yes Meleagris gallopavo 69_2 Turkey 67 58
No Yes Gallus gallus 69_2 Chicken 70 60
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 71 62
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 68 59
No Yes Anolis carolinensis 69_2.0 Green anole 79 72
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 72 62
No Yes Latimeria chalumnae 69_1 Coelacanth 82 74
No Yes Gadus morhua 69_1 Atlantic cod 83 70
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 94 81
No Yes Takifugu rubripes 69_4 Torafugu 87 77
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 86 75
No Yes Oryzias latipes 69_1 Japanese medaka 86 75
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 87 80
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 100 84
No Yes Danio rerio 69_9 Zebrafish 92 83
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 38 31
No Yes Ciona intestinalis 69 Vase tunicate 67 61
No Yes Drosophila melanogaster 69_5 Fruit fly 24 17
No Yes Caenorhabditis elegans 69_215 Roundworm 20 16
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 8 6
No Yes Arabidopsis thaliana 10 Thale cress 141 136
No Yes 1_Upper_euphotic (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   1 1
No Yes 2_Base_of_chrolophyll_max (meta-genome)   3 3
No Yes 3_050719R (meta-genome)   3 3
No Yes 3_Below_base_of_euphotic (meta-genome)   2 2
No Yes 4_050719Q (meta-genome)   18 17
No Yes 4_Deep_abyss (meta-genome)   5 5
No Yes 5_050719P (meta-genome)   12 11
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   3 3
No Yes 7_Oxygen_minimum_layer (meta-genome)   3 2
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   2 2
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   2 2
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   2 2
No Yes Combined (meta-genome)   6 6
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   8 7
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   1 1
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   24 24
No Yes Dump top (Dump top) (meta-genome)   10 10
No Yes Endophytic microbiome from Rice (meta-genome)   4 4
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   7 7
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   9 9
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   5 5
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   7 7
No Yes Fungus garden combined (combined) (meta-genome)   2 2
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   8 7
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   10 9
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   8 8
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   4 4
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   5 5
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   1 1
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   5 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   18 18
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   10 10
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   11 11
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   10 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   12 12
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   13 11
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   49 49
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   47 47
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   126 124
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   33 31
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   11 11
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   30 30
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   41 41
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   11 11
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   99 99
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   41 41
No Yes NCBI 2017_08 genome   82849 73570
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   64 60
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   456 387
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   6 6
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   5 5
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   2 2
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   5 5
No Yes Sludge/US, Jazz Assembly (meta-genome)   3 3
No Yes Sludge/US, Phrap Assembly (meta-genome)   5 5
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   68 66
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   74 74
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   82 82
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   38 38
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   42 42
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   108 108
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   143 143
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   8 6
No Yes STRING v9.0.5 (STRING)   5026 4406
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   29 29
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   86 86
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   62 62
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   62485 54891
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   14 13
No Yes Global Ocean Sampling Expedition (GOS)   1022 965
No Yes NCBI plasmid sequences (Plasmids)   11 8
No Yes NCBI viral sequences (Viral)   88 85
No Yes PDB chains (SCOP 1.75) (PDB)   4 4
No Yes Protein Data Bank (all PDB sequenc)   78 70
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   164 159
No Yes TargetDB (Targets)   155 139
No Yes The Salmonella enterica Pan-genome (meta-genome)   25 24
No Yes UniProt viral sequences (Viral)   231 231

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