SUPERFAMILY 1.75 HMM library and genome assignments server

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YgbK-like superfamily domain assignments
in
Ostreococcus lucimarinus CCE9901


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Select to display   Genome       Domains   Proteins
No Yes ALL   10150 10150
No Yes Caenorhabditis japonica   1 1
No Yes Amphimedon queenslandica   1 1
No Yes Apiospora montagnei NRRL 25634 v1.0   1 1
No Yes Magnaporthe poae ATCC 64411 22   1 1
No Yes Magnaporthe grisea 70-15   1 1
No Yes Cryphonectria parasitica Chestnut blight fungus 1 1
No Yes Verticillium albo-atrum VaMs.102   2 2
No Yes Verticillium dahliae VdLs.17   2 2
No Yes Glomerella graminicola 22   1 1
No Yes Fusarium graminearum   1 1
No Yes Nectria haematococca mpVI   2 2
No Yes Fusarium oxysporum f. sp. lycopersici 4286   2 2
No Yes Fusarium verticillioides 7600   2 2
No Yes Trichoderma atroviride   1 1
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Setosphaeria turcica v1.0   1 1
No Yes Mycosphaerella graminicola IPO323   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Mycosphaerella fijiensis CIRAD86   2 2
No Yes Dothistroma septosporum   1 1
No Yes Neosartorya fischeri NRRL 181   2 2
No Yes Penicillium chrysogenum Wisconsin 54-1255   2 2
No Yes Penicillium chrysogenum v1.0   2 2
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus fumigatus Af293   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus nidulans FGSC A4   2 2
No Yes Aspergillus sydowii v1.0   2 2
No Yes Aspergillus versicolor v1.0   2 2
No Yes Aspergillus glaucus   2 2
No Yes Aspergillus zonatus v1.0   1 1
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus wentii v1.0   1 1
No Yes Aspergillus oryzae RIB40   2 2
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Aspergillus flavus NRRL3357   2 2
No Yes Aspergillus clavatus NRRL 1   1 1
No Yes Selaginella moellendorffii   2 2
No Yes Picea abies Norway spruce 2 2
No Yes Eucalyptus grandis v201 Rose gum 1 1
No Yes Theobroma cacao B97-61/B2 v1 Cacao 1 1
No Yes Gossypium raimondii v221   6 6
No Yes Citrus clementina v165   1 1
No Yes Citrus sinensis v154 Sweet orange 1 1
No Yes Thellungiella halophila v173   1 1
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 1 1
No Yes Capsella rubella v183   1 1
No Yes Arabidopsis lyrata Lyrate rockcress 1 1
No Yes Arabidopsis thaliana 10 Thale cress 3 3
No Yes Carica papaya Papaya 1 1
No Yes Medicago truncatula Barrel medic 2 2
No Yes Phaseolus vulgaris v186 French bean 1 1
No Yes Glycine max v109 Soybean 1 1
No Yes Cucumis sativus v122 Cucumber 4 4
No Yes Fragaria vesca Wild strawberry 1 1
No Yes Malus domestica v196 Apple 2 1
No Yes Prunus persica v139 Peach 1 1
No Yes Linum usitatissimum v200 Flax 3 3
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Populus trichocarpa v156 Black cottonwood 1 1
No Yes Vitis vinifera Wine grape 1 1
No Yes Mimulus guttatus v140 Spotted monkey flower 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Aquilegia coerulea v195   2 2
No Yes Triticum urartu 22   1 1
No Yes Triticum aestivum 22 Bread wheat 4 4
No Yes Aegilops tauschii 22   1 1
No Yes Brachypodium distachyon Stiff brome 1 1
No Yes Oryza barthii 22 African wild rice 2 2
No Yes Oryza meridionalis 22   2 2
No Yes Oryza glumaepatula 22   1 1
No Yes Oryza glaberrima African rice 1 1
No Yes Oryza punctata 22   1 1
No Yes Oryza nivara 22   1 1
No Yes Oryza brachyantha 22 Malo sina 1 1
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 1 1
No Yes Oryza sativa v193 Rice 1 1
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 1 1
No Yes Zea mays subsp. mays Maize 3 3
No Yes Zea mays v181 Maize 3 3
No Yes Sorghum bicolor Sorghum 1 1
No Yes Setaria italica v164 Foxtail millet 1 1
No Yes Panicum virgatum v202 Switchgrass 3 3
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 1 1
No Yes Amborella trichopoda 22   1 1
No Yes Physcomitrella patens   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Ectocarpus siliculosus   1 1
No Yes Aureococcus anophagefferens   1 1
No Yes Fragilariopsis cylindrus   1 1
No Yes Fretibacterium fastidiosum   2 2
No Yes Anaerobaculum mobile DSM 13181   2 2
No Yes Sphaerochaeta pleomorpha str. Grapes   2 2
No Yes Sphaerochaeta globus str. Buddy   2 2
No Yes Treponema azotonutricium ZAS-9   3 3
No Yes Treponema brennaborense DSM 12168   1 1
No Yes Spirochaeta smaragdinae DSM 11293   4 4
No Yes Rhodopirellula baltica SH 1   1 1
No Yes Kineococcus radiotolerans SRS30216   3 3
No Yes Stackebrandtia nassauensis DSM 44728   2 2
No Yes Geodermatophilus obscurus DSM 43160   2 2
No Yes Thermobifida fusca YX   1 1
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   4 4
No Yes Streptomyces sp. PAMC26508   1 1
No Yes Streptomyces flavogriseus ATCC 33331   1 1
No Yes Streptomyces sp. SirexAA-E   1 1
No Yes Streptomyces bingchenggensis BCW-1   2 2
No Yes Streptomyces violaceusniger Tu 4113   3 2
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Actinosynnema mirum DSM 43827   1 1
No Yes Pseudonocardia dioxanivorans CB1190   1 1
No Yes Saccharopolyspora erythraea NRRL 2338   2 2
No Yes Microlunatus phosphovorus NM-1   1 1
No Yes Gordonia sp. KTR9   1 1
No Yes Rhodococcus opacus B4   2 2
No Yes Rhodococcus erythropolis PR4   1 1
No Yes Mycobacterium smegmatis str. MC2 155   1 1
No Yes Corynebacterium ulcerans 0102   1 1
No Yes Corynebacterium pseudotuberculosis 316   1 1
No Yes Corynebacterium diphtheriae NCTC 13129   1 1
No Yes Intrasporangium calvum DSM 43043   1 1
No Yes Brachybacterium faecium DSM 4810   1 1
No Yes Arthrobacter sp. Rue61a   2 2
No Yes Arthrobacter phenanthrenivorans Sphe3   2 2
No Yes Arthrobacter sp. FB24   2 2
No Yes Arthrobacter chlorophenolicus A6   3 3
No Yes Arthrobacter aurescens TC1   2 2
No Yes Coriobacterium glomerans PW2   2 2
No Yes Conexibacter woesei DSM 14684   1 1
No Yes Rubrobacter xylanophilus DSM 9941   1 1
No Yes Thermomicrobium roseum DSM 5159   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Terriglobus saanensis SP1PR4   1 1
No Yes Dyadobacter fermentans DSM 18053   1 1
No Yes Niastella koreensis GR20-10   2 2
No Yes Pedobacter saltans DSM 12145   1 1
No Yes Pedobacter heparinus DSM 2366   2 2
No Yes Sphingobacterium sp. 21   2 2
No Yes Zobellia galactanivorans   1 1
No Yes Opitutus terrae PB90-1   1 1
No Yes Candidatus Nitrospira defluvii   1 1
No Yes Ilyobacter polytropus DSM 2926   2 2
No Yes Fusobacterium nucleatum subsp. nucleatum ATCC 25586   1 1
No Yes Thermobaculum terrenum ATCC BAA-798   1 1
No Yes Selenomonas sputigena ATCC 35185   1 1
No Yes Faecalibacterium prausnitzii   1 1
No Yes Symbiobacterium thermophilum IAM 14863   1 1
No Yes Thermaerobacter marianensis DSM 12885   1 1
No Yes Oscillibacter valericigenes Sjm18-20   1 1
No Yes Eubacterium rectale M104/1   1 1
No Yes Eubacterium rectale ATCC 33656   1 1
No Yes Eubacterium limosum KIST612   4 4
No Yes Clostridium difficile 630   1 1
No Yes Clostridium saccharolyticum WM1   1 1
No Yes [Ruminococcus] obeum   1 1
No Yes Butyrivibrio fibrisolvens   1 1
No Yes Heliobacterium modesticaldum Ice1   1 1
No Yes Alkaliphilus oremlandii OhILAs   1 1
No Yes Alkaliphilus metalliredigens QYMF   1 1
No Yes Clostridium novyi NT   1 1
No Yes Clostridium ljungdahlii DSM 13528   3 3
No Yes Clostridium botulinum A str. ATCC 3502   1 1
No Yes Mahella australiensis 50-1 BON   2 2
No Yes Thermosediminibacter oceani DSM 16646   1 1
No Yes Coprothermobacter proteolyticus DSM 5265   1 1
No Yes Tepidanaerobacter acetatoxydans Re1   1 1
No Yes Carboxydothermus hydrogenoformans Z-2901   1 1
No Yes Moorella thermoacetica ATCC 39073   1 1
No Yes Thermoanaerobacter pseudethanolicus ATCC 33223   1 1
No Yes Thermoanaerobacter brockii subsp. finnii Ako-1   1 1
No Yes Halanaerobium hydrogeniformans   1 1
No Yes Paenibacillus sp. JDR-2   1 1
No Yes Paenibacillus terrae HPL-003   1 1
No Yes Paenibacillus mucilaginosus 3016   2 2
No Yes Oceanobacillus iheyensis HTE831   2 2
No Yes Geobacillus sp. GHH01   1 1
No Yes Geobacillus thermodenitrificans NG80-2   1 1
No Yes Bacillus sp. 1NLA3E   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus halodurans C-125   2 2
No Yes Bacillus clausii KSM-K16   3 3
No Yes Bacillus cellulosilyticus DSM 2522   1 1
No Yes Bacillus pumilus SAFR-032   2 2
No Yes Bacillus megaterium DSM 319   1 1
No Yes Desulfovibrio alaskensis G20   1 1
No Yes Azoarcus sp. KH32C   1 1
No Yes Pseudogulbenkiania sp. NH8B   1 1
No Yes Thiobacillus denitrificans ATCC 25259   1 1
No Yes Rubrivivax gelatinosus IL144   1 1
No Yes Ralstonia eutropha JMP134   1 1
No Yes Cupriavidus taiwanensis LMG 19424   1 1
No Yes Cupriavidus metallidurans CH34   2 2
No Yes Cupriavidus necator N-1   3 3
No Yes Ralstonia eutropha H16   2 2
No Yes Ralstonia pickettii 12D   1 1
No Yes Ralstonia solanacearum CFBP2957   1 1
No Yes Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1   1 1
No Yes Burkholderia sp. RPE64   3 3
No Yes Burkholderia sp. CCGE1002   1 1
No Yes Burkholderia phytofirmans PsJN   2 2
No Yes Burkholderia phymatum STM815   3 3
No Yes Burkholderia thailandensis E264   1 1
No Yes Burkholderia pseudomallei 1106a   1 1
No Yes Burkholderia ambifaria AMMD   1 1
No Yes Burkholderia cenocepacia HI2424   2 2
No Yes Burkholderia multivorans ATCC 17616   2 2
No Yes Burkholderia xenovorans LB400   2 2
No Yes Burkholderia gladioli BSR3   2 2
No Yes Burkholderia glumae BGR1   2 2
No Yes Verminephrobacter eiseniae EF01-2   1 1
No Yes Alicycliphilus denitrificans K601   1 1
No Yes Ramlibacter tataouinensis TTB310   1 1
No Yes Delftia sp. Cs1-4   1 1
No Yes Delftia acidovorans SPH-1   2 2
No Yes Polaromonas sp. JS666   3 3
No Yes Variovorax paradoxus S110   2 2
No Yes Rhodoferax ferrireducens T118   2 2
No Yes Acidovorax sp. KKS102   2 2
No Yes Collimonas fungivorans Ter331   1 1
No Yes Herbaspirillum seropedicae SmR1   1 1
No Yes Pusillimonas sp. T7-7   1 1
No Yes Advenella kashmirensis WT001   2 2
No Yes Bordetella petrii DSM 12804   1 1
No Yes Bordetella avium 197N   1 1
No Yes Bordetella pertussis Tohama I   1 1
No Yes Bordetella parapertussis 12822   1 1
No Yes Bordetella bronchiseptica RB50   2 2
No Yes Achromobacter xylosoxidans A8   3 3
No Yes Achromobacter xylosoxidans   3 3
No Yes Dinoroseobacter shibae DFL 12   1 1
No Yes Jannaschia sp. CCS1   1 1
No Yes Ruegeria pomeroyi DSS-3   1 1
No Yes Roseobacter litoralis Och 149   1 1
No Yes Roseobacter denitrificans OCh 114   1 1
No Yes Rhodobacter sphaeroides ATCC 17029   1 1
No Yes Paracoccus denitrificans PD1222   1 1
No Yes Rhodospirillum rubrum F11   1 1
No Yes Azospirillum sp. B510   1 1
No Yes Azospirillum brasilense Sp245   1 1
No Yes Acidiphilium multivorum AIU301   3 3
No Yes Acidiphilium cryptum JF-5   3 3
No Yes Polymorphum gilvum SL003B-26A1   1 1
No Yes Starkeya novella DSM 506   2 2
No Yes Xanthobacter autotrophicus Py2   2 2
No Yes Azorhizobium caulinodans ORS 571   3 3
No Yes Methylobacterium sp. 4-46   2 2
No Yes Methylobacterium nodulans ORS 2060   6 6
No Yes Methylobacterium radiotolerans JCM 2831   2 2
No Yes Ochrobactrum anthropi ATCC 49188   1 1
No Yes Brucella microti CCM 4915   2 2
No Yes Brucella pinnipedialis B2/94   1 1
No Yes Brucella canis ATCC 23365   2 2
No Yes Brucella suis ATCC 23445   2 2
No Yes Brucella melitensis ATCC 23457   2 2
No Yes Brucella ovis ATCC 25840   1 1
No Yes Brucella abortus S19   2 2
No Yes Sinorhizobium fredii NGR234   6 6
No Yes Sinorhizobium medicae WSM419   3 3
No Yes Sinorhizobium meliloti AK83   3 3
No Yes Genome sequence of Rhizobium sp. strain IRBG74   1 1
No Yes Rhizobium etli CIAT 652   3 3
No Yes Rhizobium leguminosarum bv. viciae 3841   4 4
No Yes Agrobacterium tumefaciens str. C58   1 1
No Yes Agrobacterium radiobacter K84   3 3
No Yes Agrobacterium sp. H13-3   1 1
No Yes Mesorhizobium opportunistum WSM2075   1 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   2 2
No Yes Mesorhizobium loti MAFF303099   1 1
No Yes Beijerinckia indica subsp. indica ATCC 9039   1 1
No Yes Bradyrhizobium japonicum USDA 110   3 3
No Yes Bradyrhizobium sp. ORS 278   1 1
No Yes Acidithiobacillus ferrivorans SS3   1 1
No Yes Acidithiobacillus caldus SM-1   1 1
No Yes Acidithiobacillus ferrooxidans ATCC 53993   1 1
No Yes Aggregatibacter actinomycetemcomitans D7S-1   1 1
No Yes Haemophilus somnus 129PT   2 2
No Yes Gallibacterium anatis UMN179   3 3
No Yes Pasteurella multocida subsp. multocida str. 3480   1 1
No Yes Haemophilus parasuis SH0165   1 1
No Yes Actinobacillus succinogenes 130Z   3 3
No Yes Tolumonas auensis DSM 9187   1 1
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   1 1
No Yes Vibrio harveyi ATCC BAA-1116   1 1
No Yes Vibrio furnissii NCTC 11218   1 1
No Yes Ferrimonas balearica DSM 9799   1 1
No Yes Marinomonas sp. MWYL1   2 2
No Yes Marinomonas mediterranea MMB-1   2 2
No Yes Chromohalobacter salexigens DSM 3043   2 2
No Yes Halomonas elongata DSM 2581   1 1
No Yes Spiribacter sp. UAH-SP71   1 1
No Yes Thioalkalivibrio sulfidophilus HL-EbGr7   1 1
No Yes Allochromatium vinosum DSM 180   1 1
No Yes Thiocystis violascens DSM 198   1 1
No Yes Escherichia blattae DSM 4481   2 2
No Yes Dickeya zeae Ech1591   1 1
No Yes Dickeya dadantii Ech703   2 2
No Yes Enterobacteriaceae bacterium strain FGI 57   1 1
No Yes Pectobacterium sp. SCC3193   3 3
No Yes Pectobacterium wasabiae WPP163   3 3
No Yes Pectobacterium atrosepticum SCRI1043   2 2
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   3 3
No Yes Pantoea sp. At-9b   3 3
No Yes Pantoea vagans C9-1   2 2
No Yes Pantoea ananatis LMG 20103   2 2
No Yes Photorhabdus asymbiotica   1 1
No Yes Photorhabdus luminescens subsp. laumondii TTO1   1 1
No Yes Edwardsiella tarda EIB202   1 1
No Yes Yersinia pseudotuberculosis IP 31758   1 1
No Yes Yersinia pestis Pestoides F   1 1
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   1 1
No Yes Shigella sonnei Ss046   1 1
No Yes Serratia sp. ATCC 39006   2 2
No Yes Serratia proteamaculans 568   1 1
No Yes Salmonella bongori NCTC 12419   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   2 2
No Yes Providencia stuartii MRSN 2154   1 1
No Yes Klebsiella variicola At-22   3 3
No Yes Klebsiella pneumoniae NTUH-K2044   3 3
No Yes Klebsiella oxytoca E718   3 3
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   1 1
No Yes Erwinia tasmaniensis Et1/99   1 1
No Yes Erwinia sp. Ejp617   1 1
No Yes Erwinia billingiae Eb661   2 2
No Yes Erwinia pyrifoliae Ep1/96   1 1
No Yes Erwinia amylovora ATCC 49946   1 1
No Yes Enterobacter asburiae LF7a   1 1
No Yes Enterobacter cloacae subsp. dissolvens SDM   1 1
No Yes Enterobacter aerogenes KCTC 2190   2 2
No Yes Citrobacter rodentium ICC168   3 3
No Yes Pseudomonas syringae pv. tomato str. DC3000   1 1
No Yes Pseudomonas fulva 12-X   1 1
No Yes Pseudomonas putida F1   1 1
No Yes Pseudomonas protegens Pf-5   1 1
No Yes Pseudomonas fluorescens SBW25   1 1
No Yes Geitlerinema sp. PCC 7407   1 1
No Yes Leptolyngbya sp. PCC 7376   1 1
No Yes Microcoleus sp. PCC 7113   1 1
No Yes Trichodesmium erythraeum IMS101   1 1
No Yes Pseudanabaena sp. PCC 7367   1 1
No Yes cyanobacterium UCYN-A   1 1
No Yes Thermosynechococcus sp. NK55   1 1
No Yes Thermosynechococcus elongatus BP-1   1 1
No Yes Gloeocapsa sp. PCC 7428   1 1
No Yes Halothece sp. PCC 7418   1 1
No Yes Cyanothece sp. PCC 8802   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Synechococcus sp. PCC 7502   1 1
No Yes Synechococcus sp. PCC 6312   1 1
No Yes Synechococcus sp. CC9311   1 1
No Yes Synechococcus elongatus PCC 7942   1 1
No Yes Microcystis aeruginosa NIES-843   1 1
No Yes Gloeobacter violaceus PCC 7421   1 1
No Yes Prochlorococcus marinus str. MIT 9515   1 1
No Yes Rivularia sp. PCC 7116   1 1
No Yes Calothrix sp. PCC 7507   1 1
No Yes 'Nostoc azollae' 0708   1 1
No Yes Nostoc sp. PCC 7107   1 1
No Yes Nostoc punctiforme PCC 73102   1 1
No Yes Nostoc sp. PCC 7120   1 1
No Yes Nostoc sp. PCC 7524   1 1
No Yes Anabaena sp. 90   1 1
No Yes Anabaena variabilis ATCC 29413   1 1
No Yes Candidatus Korarchaeum cryptofilum OPF8   1 1
No Yes Salinarchaeum sp. Harcht-Bsk1   1 1
No Yes Halalkalicoccus jeotgali B3   1 1
No Yes Haloferax volcanii DS2   1 1
No Yes Vulcanisaeta moutnovskia 768-28   1 1
No Yes Caldivirga maquilingensis IC-167   1 1
No Yes Aspergillus fumigatus A1163   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 1 1
No Yes Hordeum vulgare 22 Domesticated barley 1 1
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 1 1
No Yes Nocardiopsis alba ATCC BAA-2165   3 3
No Yes Streptomyces rapamycinicus NRRL 5491   3 3
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces albus J1074   1 1
No Yes Propionibacterium avidum 44067   1 1
No Yes Propionibacterium acnes 6609   1 1
No Yes Propionibacterium acnes KPA171202   1 1
No Yes Mycobacterium smegmatis str. MC2 155   1 1
No Yes Corynebacterium ulcerans BR-AD22   1 1
No Yes Corynebacterium ulcerans 809   1 1
No Yes Corynebacterium pseudotuberculosis 258   1 1
No Yes Corynebacterium pseudotuberculosis Cp162   1 1
No Yes Corynebacterium pseudotuberculosis 267   1 1
No Yes Corynebacterium pseudotuberculosis CIP 52.97   1 1
No Yes Corynebacterium pseudotuberculosis FRC41   2 2
No Yes Corynebacterium diphtheriae BH8   1 1
No Yes Corynebacterium diphtheriae HC04   1 1
No Yes Corynebacterium diphtheriae HC03   1 1
No Yes Corynebacterium diphtheriae HC02   1 1
No Yes Corynebacterium diphtheriae HC01   1 1
No Yes Corynebacterium diphtheriae 241   1 1
No Yes Echinicola vietnamensis DSM 17526   2 2
No Yes Fusobacterium nucleatum subsp. vincentii 3_1_36A2   1 1
No Yes Fusobacterium nucleatum subsp. animalis 4_8   1 1
No Yes Deinococcus peraridilitoris DSM 19664   1 1
No Yes Clostridium difficile BI1   1 1
No Yes Clostridium difficile R20291   1 1
No Yes Clostridium difficile CD196   1 1
No Yes Clostridium saccharolyticum Clostridium cf. saccharolyticum K10   3 3
No Yes Coprococcus catus GD/7   1 1
No Yes Clostridium autoethanogenum DSM 10061   2 2
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   1 1
No Yes Clostridium pasteurianum BC1   1 1
No Yes Clostridium botulinum H04402 065   1 1
No Yes Clostridium botulinum F str. 230613   1 1
No Yes Clostridium botulinum F str. Langeland   1 1
No Yes Clostridium botulinum B1 str. Okra   1 1
No Yes Clostridium botulinum Ba4 str. 657   1 1
No Yes Clostridium botulinum A2 str. Kyoto   1 1
No Yes Clostridium botulinum A3 str. Loch Maree   1 1
No Yes Clostridium botulinum A str. ATCC 19397   1 1
No Yes Halobacteroides halobius DSM 5150   1 1
No Yes Lactobacillus paracasei subsp. paracasei 8700:2   1 1
No Yes Lactobacillus casei LOCK919   1 1
No Yes Lactobacillus casei str. Zhang   1 1
No Yes Paenibacillus sp. Y412MC10   2 2
No Yes Paenibacillus mucilaginosus KNP414   2 2
No Yes Paenibacillus mucilaginosus K02   2 2
No Yes Paenibacillus polymyxa CR1   1 1
No Yes Geobacillus sp. Y412MC52   1 1
No Yes Geobacillus sp. Y412MC61   1 1
No Yes Bacillus licheniformis 9945A   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus infantis NRRL B-14911   1 1
No Yes Bacillus megaterium WSH-002   1 1
No Yes Bacillus megaterium QM B1551   1 1
No Yes Bacillus coagulans 36D1   1 1
No Yes Pandoraea pnomenusa 3kgm   2 2
No Yes Ralstonia pickettii 12J   2 2
No Yes Ralstonia solanacearum FQY_4   1 1
No Yes Ralstonia solanacearum Po82   1 1
No Yes Burkholderia sp. YI23   3 3
No Yes Burkholderia sp. CCGE1003   2 2
No Yes Burkholderia sp. CCGE1001   2 2
No Yes Burkholderia phenoliruptrix BR3459a   2 2
No Yes Burkholderia thailandensis MSMB121   1 1
No Yes Burkholderia pseudomallei MSHR305   1 1
No Yes Burkholderia pseudomallei NCTC 13179   1 1
No Yes Burkholderia pseudomallei BPC006   1 1
No Yes Burkholderia pseudomallei 1026b   1 1
No Yes Burkholderia pseudomallei 668   1 1
No Yes Burkholderia pseudomallei 1710b   1 1
No Yes Burkholderia pseudomallei K96243   1 1
No Yes Burkholderia mallei NCTC 10229   1 1
No Yes Burkholderia mallei NCTC 10247   1 1
No Yes Burkholderia mallei ATCC 23344   1 1
No Yes Burkholderia lata   1 1
No Yes Burkholderia ambifaria MC40-6   3 3
No Yes Burkholderia cenocepacia MC0-3   2 2
No Yes Burkholderia cenocepacia AU 1054   2 2
No Yes Burkholderia cenocepacia J2315   1 1
No Yes Burkholderia multivorans ATCC 17616   2 2
No Yes Burkholderia cepacia GG4   1 1
No Yes Alicycliphilus denitrificans BC   1 1
No Yes Variovorax paradoxus B4   3 3
No Yes Variovorax paradoxus EPS   2 2
No Yes Bordetella pertussis CS   1 1
No Yes Bordetella parapertussis 18323   1 1
No Yes Bordetella parapertussis Bpp5   2 2
No Yes Bordetella bronchiseptica MO149   2 2
No Yes Bordetella bronchiseptica 253   2 2
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   4 4
No Yes Octadecabacter antarcticus 307   3 3
No Yes Rhodobacter sphaeroides KD131   2 2
No Yes Rhodobacter sphaeroides 2.4.1   1 1
No Yes Paracoccus aminophilus JCM 7686   1 1
No Yes Rhodospirillum rubrum ATCC 11170   1 1
No Yes Brucella canis HSK A52141   2 2
No Yes Brucella suis VBI22   2 2
No Yes Brucella suis 1330   2 2
No Yes Brucella suis 1330   2 2
No Yes Brucella melitensis NI   2 2
No Yes Brucella melitensis M5-90   2 2
No Yes Brucella melitensis M28   2 2
No Yes Brucella melitensis bv. 1 str. 16M   2 2
No Yes Brucella abortus A13334   2 2
No Yes Brucella melitensis biovar Abortus 2308   1 1
No Yes Brucella abortus bv. 1 str. 9-941   1 1
No Yes Sinorhizobium fredii USDA 257   4 4
No Yes Sinorhizobium fredii HH103   3 3
No Yes Sinorhizobium meliloti 2011   3 3
No Yes Sinorhizobium meliloti GR4   3 3
No Yes Sinorhizobium meliloti Rm41   3 3
No Yes Sinorhizobium meliloti SM11   3 3
No Yes Sinorhizobium meliloti BL225C   3 3
No Yes Sinorhizobium meliloti 1021   3 3
No Yes Rhizobium etli CFN 42   3 3
No Yes Rhizobium etli bv. mimosae str. Mim1   3 3
No Yes Rhizobium tropici CIAT 899   3 3
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   3 3
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   3 3
No Yes Mesorhizobium australicum WSM2073   1 1
No Yes Rhodopseudomonas palustris BisB5   1 1
No Yes Rhodopseudomonas palustris BisB18   2 2
No Yes Bradyrhizobium sp. S23321   1 1
No Yes Bradyrhizobium sp. BTAi1   1 1
No Yes Bradyrhizobium oligotrophicum S58   2 2
No Yes Bradyrhizobium japonicum USDA 6   3 3
No Yes Acidithiobacillus ferrooxidans ATCC 23270   1 1
No Yes Mannheimia succiniciproducens MBEL55E   3 3
No Yes Aggregatibacter actinomycetemcomitans ANH9381   1 1
No Yes Aggregatibacter actinomycetemcomitans D11S-1   1 1
No Yes Haemophilus somnus 2336   2 2
No Yes Mannheimia haemolytica USMARC_2286   2 2
No Yes Mannheimia haemolytica M42548   2 2
No Yes Mannheimia haemolytica D174   2 2
No Yes Mannheimia haemolytica D171   1 1
No Yes Mannheimia haemolytica D153   2 2
No Yes Mannheimia haemolytica USDA-ARS-USMARC-183   2 2
No Yes Mannheimia haemolytica USDA-ARS-USMARC-185   2 2
No Yes Pasteurella multocida 36950   1 1
No Yes Pasteurella multocida subsp. multocida str. HN06   1 1
No Yes Pasteurella multocida subsp. multocida str. Pm70   1 1
No Yes Haemophilus parasuis ZJ0906   1 1
No Yes Haemophilus influenzae KR494   1 1
No Yes Haemophilus influenzae 10810   1 1
No Yes Haemophilus influenzae PittGG   2 2
No Yes Haemophilus influenzae R2866   1 1
No Yes Haemophilus influenzae Rd KW20   1 1
No Yes Vibrio sp. EJY3   2 2
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   1 1
No Yes Dickeya dadantii Ech586   2 2
No Yes Dickeya dadantii 3937   1 1
No Yes Raoultella ornithinolytica B6   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   2 2
No Yes Pantoea ananatis LMG 5342   2 2
No Yes Pantoea ananatis PA13   2 2
No Yes Pantoea ananatis AJ13355   2 2
No Yes Edwardsiella tarda C07-087   1 1
No Yes Edwardsiella tarda FL6-60   1 1
No Yes Yersinia pseudotuberculosis PB1/+   1 1
No Yes Yersinia pseudotuberculosis YPIII   1 1
No Yes Yersinia pseudotuberculosis IP 32953   1 1
No Yes Yersinia pestis biovar Microtus str. 91001   1 1
No Yes Yersinia pestis A1122   1 1
No Yes Yersinia pestis Z176003   1 1
No Yes Yersinia pestis D182038   1 1
No Yes Yersinia pestis D106004   1 1
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   1 1
No Yes Yersinia pestis Nepal516   1 1
No Yes Yersinia pestis Antiqua   1 1
No Yes Yersinia pestis Angola   1 1
No Yes Yersinia pestis CO92   1 1
No Yes Yersinia pestis KIM10+   1 1
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   1 1
No Yes Yersinia enterocolitica subsp. palearctica Y11   1 1
No Yes Shigella sonnei 53G   1 1
No Yes Shigella flexneri 2002017   1 1
No Yes Shigella boydii Sb227   1 1
No Yes Serratia marcescens FGI94   2 2
No Yes Serratia marcescens WW4   1 1
No Yes Serratia liquefaciens ATCC 27592   1 1
No Yes Salmonella bongori N268-08   2 2
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   2 2
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   2 2
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   2 2
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   2 2
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   2 2
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   2 2
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   2 2
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   2 2
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   2 2
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   1 1
No Yes Salmonella enterica serovar Bovismorbificans genomics   2 2
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   2 2
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   2 2
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   2 2
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   2 2
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   2 2
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   2 2
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   2 2
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   3 3
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   3 3
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   1 1
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   2 2
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   2 2
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   2 2
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   2 2
No Yes Klebsiella pneumoniae JM45   3 3
No Yes Klebsiella pneumoniae CG43   3 3
No Yes Klebsiella pneumoniae KCTC 2242   3 3
No Yes Klebsiella pneumoniae 342   4 4
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   3 3
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   2 2
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   4 4
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   3 3
No Yes Klebsiella oxytoca KCTC 1686   2 2
No Yes Escherichia coli E. coli PMV-1   2 2
No Yes Escherichia coli JJ1886   2 2
No Yes Escherichia coli LY180   1 1
No Yes Escherichia coli APEC O78   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2050   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2071   1 1
No Yes Escherichia coli O104:H4 str. 2011C-3493   1 1
No Yes Escherichia coli NA114   2 2
No Yes Escherichia coli P12b   1 1
No Yes Escherichia coli str. 'clone D i2'   2 2
No Yes Escherichia coli str. 'clone D i14'   2 2
No Yes Escherichia coli UM146   2 2
No Yes Escherichia coli IHE3034   2 2
No Yes Escherichia coli UMNK88   1 1
No Yes Escherichia coli O83:H1 str. NRG 857C   2 2
No Yes Escherichia coli ABU 83972   2 2
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli LF82   2 2
No Yes Escherichia coli ED1a   1 1
No Yes Escherichia coli 55989   1 1
No Yes Escherichia coli S88   2 2
No Yes Escherichia coli IAI1   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli ATCC 8739   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli SE15   2 2
No Yes Escherichia coli SE11   1 1
No Yes Escherichia coli APEC O1   2 2
No Yes Escherichia coli O103:H2 str. 12009   1 1
No Yes Escherichia coli UTI89   2 2
No Yes Escherichia coli 536   2 2
No Yes Escherichia coli HS   1 1
No Yes Escherichia coli E24377A   1 1
No Yes Escherichia coli ETEC H10407   1 1
No Yes Escherichia coli O26:H11 str. 11368   1 1
No Yes Escherichia coli CFT073   2 2
No Yes Escherichia coli O111:H- str. 11128   1 1
No Yes Escherichia coli O127:H6 str. E2348/69   2 2
No Yes Escherichia coli str. K-12 substr. MDS42   1 1
No Yes Escherichia coli BW2952   1 1
No Yes Escherichia coli str. K-12 substr. MG1655   1 1
No Yes Escherichia coli str. K-12 substr. W3110   1 1
No Yes Escherichia coli str. K-12 substr. DH10B   1 1
No Yes Escherichia coli B str. REL606   1 1
No Yes Erwinia pyrifoliae DSM 12163   1 1
No Yes Erwinia amylovora CFBP1430   1 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   1 1
No Yes Enterobacter aerogenes EA1509E   3 3
No Yes Pseudomonas syringae pv. phaseolicola 1448A   2 2
No Yes Pseudomonas syringae pv. syringae B728a   1 1
No Yes Pseudomonas putida ND6   1 1
No Yes Pseudomonas protegens CHA0   1 1
No Yes Crinalium epipsammum PCC 9333   1 1
No Yes Arthrospira platensis NIES-39   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Oscillatoria acuminata PCC 6304   1 1
No Yes Chamaesiphon minutus PCC 6605   1 1
No Yes Cyanobium gracile PCC 6307   1 1
No Yes Cyanobacterium aponinum PCC 10605   1 1
No Yes Cyanobacterium stanieri PCC 7202   1 1
No Yes Cyanothece sp. PCC 7822   1 1
No Yes Cyanothece sp. PCC 7425   1 1
No Yes Cyanothece sp. PCC 7424   1 1
No Yes Cyanothece sp. ATCC 51142   1 1
No Yes Cyanothece sp. PCC 8801   1 1
No Yes Dactylococcopsis salina PCC 8305   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   1 1
No Yes Synechocystis sp. PCC 6803 substr. GT-I   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Synechococcus sp. JA-2-3B'a(2-13)   1 1
No Yes Synechococcus sp. JA-3-3Ab   1 1
No Yes Synechococcus sp. CC9902   1 1
No Yes Synechococcus sp. RCC307   1 1
No Yes Synechococcus sp. CC9605   1 1
No Yes Synechococcus sp. WH 8102   1 1
No Yes Synechococcus sp. WH 7803   1 1
No Yes Synechococcus sp. PCC 7002   1 1
No Yes Synechococcus elongatus PCC 6301   1 1
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   1 1
No Yes Stanieria cyanosphaera PCC 7437   1 1
No Yes Chroococcidiopsis thermalis PCC 7203   1 1
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   1 1
No Yes Prochlorococcus marinus str. NATL1A   1 1
No Yes Prochlorococcus marinus str. MIT 9301   1 1
No Yes Prochlorococcus marinus str. AS9601   1 1
No Yes Prochlorococcus marinus subsp. marinus str. CCMP1375   1 1
No Yes Prochlorococcus marinus subsp. pastoris str. CCMP1986   1 1
No Yes Prochlorococcus marinus str. MIT 9215   1 1
No Yes Prochlorococcus marinus str. MIT 9211   1 1
No Yes Prochlorococcus marinus str. MIT 9313   1 1
No Yes Prochlorococcus marinus str. MIT 9312   1 1
No Yes Prochlorococcus marinus str. MIT 9303   1 1
No Yes Prochlorococcus marinus str. NATL2A   1 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   1 1
No Yes Cylindrospermum stagnale PCC 7417   1 1
No Yes Anabaena cylindrica PCC 7122   1 1
No Yes Natronococcus occultus SP4   1 1
No Yes Lotus japonicus (Early assembly)   1 1
No Yes Malus x domestica (Duplicate) Apple 2 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   1 1
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Phoenix dactylifera (Early draft) Date palm 2 2
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes 1_Upper_euphotic (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   3 3
No Yes 2_Base_of_chrolophyll_max (meta-genome)   2 2
No Yes 3_050719R (meta-genome)   1 1
No Yes 4_050719Q (meta-genome)   13 13
No Yes 5_050719P (meta-genome)   5 5
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   2 2
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   2 2
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   4 4
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   18 18
No Yes Combined (meta-genome)   55 55
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   58 58
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   15 15
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   10 10
No Yes Dump bottom (Dump bottom) (meta-genome)   69 69
No Yes Dump top (Dump top) (meta-genome)   76 76
No Yes Endophytic microbiome from Rice (meta-genome)   5 5
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   2 2
No Yes Fungus garden combined (combined) (meta-genome)   38 38
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   41 41
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   48 48
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   6 6
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   8 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   7 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   1 1
No Yes Human Gut Community Subject 7 (meta-genome)   3 3
No Yes Human Gut Community Subject 8 (meta-genome)   2 2
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   5 5
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   3 3
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   24 24
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   6 6
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   4 4
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   6 6
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   2 2
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   8 8
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   5 5
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   1 1
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   27 27
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   10 10
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   18 18
No Yes Sludge/US, Phrap Assembly (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   5 5
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   33 33
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   65 65
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   51 51
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   43 43
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   15 15
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   18 18
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   3 3
No Yes STRING v9.0.5 (STRING)   408 408
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   8 8
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   25 25
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   1 1
No Yes Uniprot 2017_06 genome   6562 6532
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   4 4
No Yes Global Ocean Sampling Expedition (GOS)   388 388
No Yes NCBI plasmid sequences (Plasmids)   88 88
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   11 11
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   34 34
No Yes TargetDB (Targets)   14 14
No Yes The Salmonella enterica Pan-genome (meta-genome)   55 55

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