SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


PG0945 N-terminal domain-like family domain assignments
in
all bacterial and archaeal genomes

Assignment details

(show help)

4 selected genomes have 4 significant domains in 4 proteins.


Parabacteroides distasonis ATCC 8503 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|150008466|ref|YP_001303209.1|   5.43e-37   0.0000733   49-181   2p0s A:48-183  

Porphyromonas gingivalis ATCC 33277 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|188994869|ref|YP_001929121.1|   3.15e-36   0.000000198   48-180   2p0s A:48-183  

Porphyromonas gingivalis TDC60 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|334146665|ref|YP_004509593.1|   3.15e-36   0.000000198   48-180   2p0s A:48-183  

Porphyromonas gingivalis W83 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|34540697|ref|NP_905176.1|   3.15e-36   0.000000198   48-180   2p0s A:48-183  

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a PG0945 N-terminal domain-like domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   212 212
No Yes Parabacteroides distasonis ATCC 8503   1 1
No Yes Porphyromonas gingivalis ATCC 33277   1 1
No Yes Porphyromonas gingivalis TDC60   1 1
No Yes Porphyromonas gingivalis W83   1 1
No Yes NCBI 2017_08 genome   117 117
No Yes STRING v9.0.5 (STRING)   3 3
No Yes Uniprot 2018_03 genome   71 71
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   2 2
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   6 6
No Yes TargetDB (Targets)   2 2

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]