SUPERFAMILY 1.75 HMM library and genome assignments server

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BLRF2-like superfamily domain assignments
in
Ostreococcus lucimarinus CCE9901

Network of domain occurrence in all genomes



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Select to display   Genome       Domains   Proteins
No Yes ALL   302 302
No Yes Sclerotinia sclerotiorum   1 1
No Yes Aspergillus zonatus v1.0   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Streptococcus infantarius subsp. infantarius CJ18   1 1
No Yes Bacillus clausii KSM-K16   1 1
No Yes Sulfurovum sp. NBC37-1   1 1
No Yes Pseudomonas sp. VLB120   1 1
No Yes Anabaena variabilis ATCC 29413   1 1
No Yes Streptococcus lutetiensis 033   1 1
No Yes Streptococcus pneumoniae 70585   1 1
No Yes Wolbachia endosymbiont of Drosophila melanogaster   1 1
No Yes Wolbachia endosymbiont of Drosophila simulans wHa   1 1
No Yes 3_050719R (meta-genome)   2 2
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   7 7
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2017_06 genome   186 186
No Yes NCBI plasmid sequences (Plasmids)   1 1
No Yes NCBI viral sequences (Viral)   20 20
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   6 6
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   12 12
No Yes TargetDB (Targets)   8 8
No Yes UniProt viral sequences (Viral)   35 35

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