SUPERFAMILY 1.75 HMM library and genome assignments server


PGBD-like superfamily domain assignments
in
all eukaryotic genomes

Assignment details

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25 selected genomes have 134 significant domains in 125 proteins.

Showing genomes 126 to 150 of 298
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Taenia solium has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
TsM_000891900;OldName=snap_34943   2.35e-13   80-125   MMP N-terminal domain  

Schistosoma mansoni has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Smp_145930   1.88e-11   71-114   MMP N-terminal domain  

Acropora digitifera v1.0 has 7 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
adi_v1.02174   2.2e-14   46-107   MMP N-terminal domain  
adi_v1.02175   1.54e-09   2-65   MMP N-terminal domain  
adi_v1.02177   1.96e-08   50-103   MMP N-terminal domain  
adi_v1.02178   4.87e-12   38-102   MMP N-terminal domain  
adi_v1.03024   5.65e-15   7-64   MMP N-terminal domain  
adi_v1.03033   2.62e-17   10-75   MMP N-terminal domain  
adi_v1.10680   1.11e-09   13-75   Peptidoglycan binding domain, PGBD  

Nematostella vectensis 1.0 has 18 significant domains in 17 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Nemve1|113239|e_gw.116.11.1   7.06e-18   1-57   MMP N-terminal domain  
jgi|Nemve1|142824|e_gw.708.4.1   2.2e-14   11-51   MMP N-terminal domain  
jgi|Nemve1|14580|gw.212.29.1   8.79e-11   1-35   MMP N-terminal domain  
jgi|Nemve1|15302|gw.116.63.1   3.61e-17   1-56   MMP N-terminal domain  
jgi|Nemve1|164094|estExt_gwp.C_460298   7.53e-17   14-84   MMP N-terminal domain  
jgi|Nemve1|166550|estExt_gwp.C_750035   1.49e-18   22-86   MMP N-terminal domain  
jgi|Nemve1|197990|fgenesh1_pg.scaffold_8000031   1.73e-18   16-84   MMP N-terminal domain  
jgi|Nemve1|197992|fgenesh1_pg.scaffold_8000033   3.45e-18   16-84   MMP N-terminal domain  
  4.24e-18   303-369   MMP N-terminal domain  
jgi|Nemve1|212591|fgenesh1_pg.scaffold_158000042   1.41e-10   109-147   MMP N-terminal domain  
jgi|Nemve1|214361|fgenesh1_pg.scaffold_198000012   1.57e-18   159-226   MMP N-terminal domain  
jgi|Nemve1|238737|estExt_fgenesh1_pg.C_80030   2.51e-18   16-84   MMP N-terminal domain  
jgi|Nemve1|32224|gw.7.84.1   2.2e-10   1-62   MMP N-terminal domain  
jgi|Nemve1|61733|gw.34.190.1   9.1e-16   1-54   MMP N-terminal domain  
jgi|Nemve1|79314|e_gw.1.257.1   1.52e-14   1-57   MMP N-terminal domain  
jgi|Nemve1|82725|e_gw.6.375.1   2.04e-16   1-54   MMP N-terminal domain  
jgi|Nemve1|83189|e_gw.7.369.1   4.24e-15   1-61   MMP N-terminal domain  
jgi|Nemve1|99081|e_gw.52.312.1   8.11e-07   1-55   Peptidoglycan binding domain, PGBD  
 
Weak hits:
jgi|Nemve1|88668|e_gw.19.86.1   0.0314   1-25   MMP N-terminal domain  

Hydra vulgaris has 13 significant domains in 13 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|221107524|ref|XP_002170324.1|   1.05e-16   1-62   MMP N-terminal domain  
gi|449664773|ref|XP_004205997.1|   5.3e-13   28-87   MMP N-terminal domain  
gi|449665060|ref|XP_002164594.2|   7.85e-16   27-85   MMP N-terminal domain  
gi|449668752|ref|XP_002163814.2|   2.04e-16   22-80   MMP N-terminal domain  
gi|449671383|ref|XP_004207480.1|   1.88e-11   44-124   MMP N-terminal domain  
gi|449673888|ref|XP_004208056.1|   6.08e-18   184-258   Peptidoglycan binding domain, PGBD  
gi|449682739|ref|XP_002164557.2|   8.16e-17   22-77   MMP N-terminal domain  
gi|449686980|ref|XP_004211314.1|   2.83e-13   28-92   MMP N-terminal domain  
gi|449687821|ref|XP_002163794.2|   8.01e-13   430-508   MMP N-terminal domain  
gi|449690922|ref|XP_002160477.2|   2.04e-13   5-44   MMP N-terminal domain  
gi|449691899|ref|XP_002165116.2|   2.98e-17   22-77   MMP N-terminal domain  
gi|449691922|ref|XP_002163948.2|   4.4e-17   22-77   MMP N-terminal domain  
gi|449692030|ref|XP_002155089.2|   9.81e-18   4-66   MMP N-terminal domain  
 
Weak hits:
gi|449680675|ref|XP_004209646.1|   0.00275   66-93   MMP N-terminal domain  

Trichoplax adhaerens has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Triad1|62885|fgeneshTA2_pg.C_scaffold_1939000001   6.8e-08   154-204   Peptidoglycan binding domain, PGBD  
 
Weak hits:
jgi|Triad1|58925|fgeneshTA2_pg.C_scaffold_9000144   0.0942   71-110   Peptidoglycan binding domain, PGBD  

Proterospongia sp. ATCC 50818 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
PTSG_04762T0   1.48e-07   60-127   MMP N-terminal domain  
PTSG_04764T0   1.26e-07   60-127   MMP N-terminal domain  

Monosiga brevicollis has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Monbr1|22693|fgenesh2_pg.scaffold_3000049   2.98e-10   29-99   Peptidoglycan binding domain, PGBD  

Capsaspora owczarzaki ATCC 30864 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
CAOG_00469T0   3.61e-11   28-97   MMP N-terminal domain  

Stagonospora nodorum has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
SNOT_04563   1.96e-07   54-111   MMP N-terminal domain  
 
Weak hits:
SNOT_11309   0.0146   249-311   Peptidoglycan binding domain, PGBD  
  0.0283   336-368   MMP N-terminal domain  

Neosartorya fischeri NRRL 181 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
NFIA_091870||matrix   5.81e-12   24-85   MMP N-terminal domain  
 
Weak hits:
NFIA_020260||Sin3   0.00366   217-279   Peptidoglycan binding domain, PGBD  
  0.0298   303-334   MMP N-terminal domain  
NFIA_053730||RNP   0.0353   119-171   Peptidoglycan binding domain, PGBD  
NFIA_102430||ubiquitin   0.0126   248-282   Peptidoglycan binding domain, PGBD  

Aspergillus zonatus v1.0 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Aspzo1|143175|fgenesh1_pg.9_#_234   7.72e-13   405-475   Peptidoglycan binding domain, PGBD  
 
Weak hits:
jgi|Aspzo1|131369|fgenesh1_kg.5_#_492_#_Locus4250v1rpkm47.11   0.0968   293-343   MMP N-terminal domain  

Aspergillus wentii v1.0 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Aspwe1|472563|CE284043_3487   4.08e-14   20-87   MMP N-terminal domain  
 
Weak hits:
jgi|Aspwe1|103827|e_gw1.2.1235.1   0.00602   227-289   Peptidoglycan binding domain, PGBD  

Aspergillus flavus NRRL3357 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
AFL2T_07255   3.34e-06   15-74   MMP N-terminal domain  

Dictyostelium discoideum has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
DDB0306447|DDB_G0286137   4.24e-09   430-494   MMP N-terminal domain  
DDB0308028|DDB_G0280311   5.89e-07   468-512   Peptidoglycan binding domain, PGBD  
DDB0308739|DDB_G0279747   1.1e-07   28-102   Peptidoglycan binding domain, PGBD  

Dictyostelium purpureum has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Dicpu1|156569|GID1.0047223   5.89e-08   402-474   Peptidoglycan binding domain, PGBD  
jgi|Dicpu1|157221|GID1.0047875   3.92e-09   30-97   Peptidoglycan binding domain, PGBD  
jgi|Dicpu1|47448|estExt_Genewise1.C_1040024   1.73e-08   327-389   MMP N-terminal domain  
 
Weak hits:
jgi|Dicpu1|151104|GID1.0041793   0.0199   23-60   MMP N-terminal domain  

Entamoeba invadens 1.2 has 11 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
jCVI|EIN_076000   1.41e-17   13-79   Peptidoglycan binding domain, PGBD  
  1.65e-16   211-270   Peptidoglycan binding domain, PGBD  
  4.71e-15   148-211   Peptidoglycan binding domain, PGBD  
  5.18e-15   79-140   Peptidoglycan binding domain, PGBD  
jCVI|EIN_100240   6.44e-05   214-254   MMP N-terminal domain  
jCVI|EIN_281700   4.45e-17   445-507   Peptidoglycan binding domain, PGBD  
  6.54e-16   364-424   Peptidoglycan binding domain, PGBD  
  1.83e-15   274-331   Peptidoglycan binding domain, PGBD  
  3.4e-15   523-585   Peptidoglycan binding domain, PGBD  
  9.58e-08   126-179   MMP N-terminal domain  
  8.63e-07   2-41   Peptidoglycan binding domain, PGBD  

Selaginella moellendorffii has 6 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Selmo1|110370|e_gw1.40.496.1   1.43e-15   49-123   MMP N-terminal domain  
jgi|Selmo1|128150|e_gw1.89.72.1   1.73e-15   49-123   MMP N-terminal domain  
jgi|Selmo1|13930|gw1.13.228.1   1.73e-17   21-85   MMP N-terminal domain  
jgi|Selmo1|3042|gw1.152.10.1   1.73e-17   21-85   MMP N-terminal domain  
jgi|Selmo1|404832|fgenesh2_pg.C_scaffold_3000055   1.1e-11   231-297   Peptidoglycan binding domain, PGBD  
jgi|Selmo1|421058|fgenesh2_pg.C_scaffold_49000079   1.1e-11   231-297   Peptidoglycan binding domain, PGBD  

Pinus taeda has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
PITA_000008771-RA   2.2e-11   228-294   Peptidoglycan binding domain, PGBD  
 
Weak hits:
PITA_000044382-RA   0.0942   620-654   MMP N-terminal domain  

Picea abies has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
MA_10426152g0010   2.35e-16   59-130   MMP N-terminal domain  
MA_692g0010   3.14e-11   226-292   Peptidoglycan binding domain, PGBD  

Eucalyptus grandis v201 has 12 significant domains in 12 proteins.

     

Sequence ID   Evalue   Region   Family  
Eucgr.B02562.1|PACid:23567742   7.22e-17   58-132   MMP N-terminal domain  
Eucgr.D02088.1|PACid:23575904   4.4e-16   58-130   MMP N-terminal domain  
Eucgr.D02504.1|PACid:23576420   8.01e-16   57-130   MMP N-terminal domain  
Eucgr.H00072.1|PACid:23589396   2.3e-12   205-273   Peptidoglycan binding domain, PGBD  
Eucgr.H00072.2|PACid:23589397   2.25e-12   205-273   Peptidoglycan binding domain, PGBD  
Eucgr.H00072.3|PACid:23589398   2.07e-12   205-273   Peptidoglycan binding domain, PGBD  
Eucgr.I01878.1|PACid:23596583   3.61e-18   32-106   MMP N-terminal domain  
Eucgr.K02792.1|PACid:23604422   2.51e-17   44-124   MMP N-terminal domain  
Eucgr.K02793.1|PACid:23604423   4.4e-11   5-78   MMP N-terminal domain  
Eucgr.K02794.1|PACid:23604424   4.24e-12   12-61   MMP N-terminal domain  
Eucgr.K02795.1|PACid:23604425   6.44e-16   132-213   MMP N-terminal domain  
Eucgr.K02797.1|PACid:23604427   5.02e-17   44-124   MMP N-terminal domain  
 
Weak hits:
Eucgr.E00837.1|PACid:23577564   0.0746   21-78   MMP N-terminal domain  
Eucgr.E00838.1|PACid:23577565   0.0104   38-88   MMP N-terminal domain  

Theobroma cacao B97-61/B2 v1 has 14 significant domains in 14 proteins.

     

Sequence ID   Evalue   Region   Family  
Tc00_g007000   7.69e-16   44-122   MMP N-terminal domain  
Tc00_g008710   4.55e-16   62-141   MMP N-terminal domain  
Tc00_g037020   1.54e-16   54-128   MMP N-terminal domain  
Tc01_g038470   5.97e-16   38-110   MMP N-terminal domain  
Tc02_g000890   3.14e-16   47-126   MMP N-terminal domain  
Tc03_g024900   2.04e-17   57-132   MMP N-terminal domain  
Tc04_g015360   7.53e-17   44-116   MMP N-terminal domain  
Tc04_g015390   1.31e-20   42-114   MMP N-terminal domain  
Tc04_g015410   3.45e-17   42-114   MMP N-terminal domain  
Tc04_g021360   1.96e-12   171-238   Peptidoglycan binding domain, PGBD  
Tc09_g023160   4.55e-15   44-122   MMP N-terminal domain  
Tc10_g008380   8.01e-15   41-122   MMP N-terminal domain  
Tc10_g009810   5.34e-13   43-122   MMP N-terminal domain  
Tc10_g014760   1.05e-10   16-83   MMP N-terminal domain  

Gossypium raimondii v221 has 15 significant domains in 15 proteins.

     

Sequence ID   Evalue   Region   Family  
Gorai.001G258900.1|PACid:26823345   4.71e-17   41-119   MMP N-terminal domain  
Gorai.007G028300.1|PACid:26785548   9.42e-15   63-132   MMP N-terminal domain  
Gorai.007G077400.1|PACid:26785557   6.67e-19   40-114   MMP N-terminal domain  
Gorai.007G077600.1|PACid:26778662   3.92e-19   21-97   MMP N-terminal domain  
Gorai.007G088000.1|PACid:26784043   1.19e-14   57-128   MMP N-terminal domain  
Gorai.008G052600.1|PACid:26818317   1.73e-16   52-127   MMP N-terminal domain  
Gorai.008G234700.1|PACid:26815863   5.81e-12   59-132   MMP N-terminal domain  
Gorai.008G234800.1|PACid:26816770   7.38e-17   58-132   MMP N-terminal domain  
Gorai.009G345000.1|PACid:26769285   7.06e-17   52-127   MMP N-terminal domain  
Gorai.011G160100.1|PACid:26806854   1.2e-08   186-262   Peptidoglycan binding domain, PGBD  
Gorai.011G160100.2|PACid:26806855   1.67e-12   186-254   Peptidoglycan binding domain, PGBD  
Gorai.011G160100.3|PACid:26806858   1.18e-12   186-254   Peptidoglycan binding domain, PGBD  
Gorai.011G160100.4|PACid:26806856   1.57e-12   186-254   Peptidoglycan binding domain, PGBD  
Gorai.011G160100.5|PACid:26806857   1.44e-12   186-254   Peptidoglycan binding domain, PGBD  
Gorai.011G233400.1|PACid:26811141   3.53e-16   38-114   MMP N-terminal domain  
 
Weak hits:
Gorai.007G062400.1|PACid:26783683   0.0942   62-85   Peptidoglycan binding domain, PGBD  
Gorai.008G234900.1|PACid:26814879   0.000235   48-113   MMP N-terminal domain  

Citrus clementina v165 has 7 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
clementine0.9_012944m|PACid:19276255   7.59e-12   162-230   Peptidoglycan binding domain, PGBD  
clementine0.9_013380m|PACid:19260098   8.63e-18   51-128   MMP N-terminal domain  
clementine0.9_019468m|PACid:19258647   8.01e-14   3-65   MMP N-terminal domain  
clementine0.9_028782m|PACid:19286332   1.29e-15   47-134   MMP N-terminal domain  
clementine0.9_033169m|PACid:19286132   4.19e-18   5-79   MMP N-terminal domain  
clementine0.9_033193m|PACid:19268002   8.32e-17   49-123   MMP N-terminal domain  
clementine0.9_034535m|PACid:19258602   2.04e-12   23-90   MMP N-terminal domain  

Citrus sinensis v154 has 10 significant domains in 10 proteins.

     

Sequence ID   Evalue   Region   Family  
orange1.1g021444m|PACid:18102852   2.51e-16   3-69   MMP N-terminal domain  
orange1.1g035681m|PACid:18130319   1.22e-16   50-131   MMP N-terminal domain  
orange1.1g037265m|PACid:18114779   1.3e-15   38-125   MMP N-terminal domain  
orange1.1g037540m|PACid:18094419   1.16e-16   55-129   MMP N-terminal domain  
orange1.1g039411m|PACid:18127722   1.69e-09   2-34   MMP N-terminal domain  
orange1.1g039712m|PACid:18130318   8.95e-11   3-40   MMP N-terminal domain  
orange1.1g040777m|PACid:18135514   8.11e-12   162-229   Peptidoglycan binding domain, PGBD  
orange1.1g042321m|PACid:18132818   4.4e-05   3-56   MMP N-terminal domain  
orange1.1g043086m|PACid:18114561   5.81e-18   49-129   MMP N-terminal domain  
orange1.1g045359m|PACid:18107079   1.7e-11   144-212   Peptidoglycan binding domain, PGBD  

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Select to display   Genome       Domains   Proteins
No Yes ALL   57742 57742
No Yes Homo sapiens 76_38 Human 36 36
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 19 19
No Yes Gorilla gorilla 76_3.1 Western gorilla 25 25
No Yes Pongo abelii 76_2 Sumatran orangutan 17 17
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 22 22
No Yes Papio anubis 76 Olive baboon 22 22
No Yes Macaca mulatta 76_1 Rhesus monkey 23 23
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 29 29
No Yes Otolemur garnettii 76_3 Small-eared galago 20 20
No Yes Microcebus murinus 76_1 Gray mouse lemur 15 15
No Yes Tarsius syrichta 76_1 Philippine tarsier 14 14
No Yes Rattus norvegicus 76_5.0 Norway rat 21 21
No Yes Mus musculus 76_38 House mouse 34 34
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 20 20
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 14 14
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 19 19
No Yes Cavia porcellus 76_3 Domestic guinea pig 14 14
No Yes Oryctolagus cuniculus 76_2 Rabbit 21 21
No Yes Ochotona princeps 76 American pika 19 19
No Yes Tupaia belangeri 76 Northern tree shrew 15 15
No Yes Sus scrofa 76_10.2 Pig 19 19
No Yes Bos taurus 76_3.1 Cattle 18 18
No Yes Ovis aries 76_3.1 Sheep 22 22
No Yes Vicugna pacos 76_1 Alpaca 8 8
No Yes Tursiops truncatus 76_1 Bottlenosed dolphin 12 12
No Yes Mustela putorius furo 76_1.0 Domestic ferret 17 17
No Yes Ailuropoda melanoleuca 76_1 Giant panda 21 21
No Yes Canis familiaris 76_3.1 Dog 24 24
No Yes Felis catus 76_6.2 Domestic cat 19 19
No Yes Equus caballus 76_2 Horse 18 18
No Yes Myotis lucifugus 76_2.0 Little brown bat 18 18
No Yes Pteropus vampyrus 76_1 Large flying fox 19 19
No Yes Sorex araneus 76_1 European shrew 10 10
No Yes Erinaceus europaeus 76 Western European hedgehog 14 14
No Yes Procavia capensis 76_1 Cape rock hyrax 18 18
No Yes Loxodonta africana 76_3 African savanna elephant 24 24
No Yes Echinops telfairi 76 Small Madagascar hedgehog 15 15
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 20 19
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 10 10
No Yes Macropus eugenii 76_1.0 Tammar wallaby 14 14
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 19 19
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 17 17
No Yes Ornithorhynchus anatinus 76_5 Platypus 15 15
No Yes Saccoglossus kowalevskii v3.0   11 11
No Yes Petromyzon marinus 76_7.0 Sea lamprey 6 6
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 11 11
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 12 12
No Yes Meleagris gallopavo 76_2 Turkey 22 22
No Yes Gallus gallus 76_4 Chicken 12 12
No Yes Anas platyrhynchos 76_1.0 Mallard 11 11
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 13 13
No Yes Anolis carolinensis 76_2.0 Green anole 18 18
No Yes Xenopus laevis African clawed frog 55 55
No Yes Xenopus tropicalis 76_4.2 Western clawed frog 34 34
No Yes Latimeria chalumnae 76_1 Coelacanth 24 24
No Yes Lepisosteus oculatus 76 Spotted gar 20 20
No Yes Gadus morhua 76_1 Atlantic cod 17 17
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 26 26
No Yes Takifugu rubripes 76_4 Torafugu 76 76
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 26 26
No Yes Oryzias latipes 76_1 Japanese medaka 23 23
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 18 18
No Yes Poecilia formosa 76 Amazon molly 28 27
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 26 26
No Yes Astyanax mexicanus 76 Mexican tetra 21 21
No Yes Danio rerio 76_9 Zebrafish 30 30
No Yes Branchiostoma floridae 1.0 Florida lancelet 38 38
No Yes Oikopleura dioica   2 2
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 18 18
No Yes Ciona intestinalis 76 Vase tunicate 6 6
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 20 20
No Yes Crassostrea gigas 22 Pacific oyster 4 4
No Yes Lottia gigantea Owl limpet 5 5
No Yes Helobdella robusta   15 15
No Yes Capitella sp. I   3 3
No Yes Danaus plexippus OGS1.0 Monarch butterfly 3 3
No Yes Heliconius melpomene Postman butterfly 3 3
No Yes Bombyx mori Domestic silkworm 2 2
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 6 6
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 2 2
No Yes Linepithema humile v1.1 Argentine ant 2 2
No Yes Solenopsis invicta v.2.2.3 Red fire ant 4 4
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 1 1
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 2 2
No Yes Atta cephalotes v1.1   1 1
No Yes Camponotus floridanus v3.3 Florida carpenter ant 8 8
No Yes Drosophila grimshawi 1.3   2 2
No Yes Drosophila willistoni 1.3   2 2
No Yes Drosophila pseudoobscura 2.13   2 2
No Yes Drosophila persimilis 1.3   2 2
No Yes Drosophila suzukii   1 1
No Yes Drosophila yakuba 1.3   2 2
No Yes Drosophila simulans 1.3   2 2
No Yes Drosophila sechellia 1.3   2 2
No Yes Drosophila melanogaster 76_5 Fruit fly 11 11
No Yes Drosophila erecta 1.3   2 2
No Yes Drosophila ananassae 1.3   2 2
No Yes Drosophila virilis 1.2   2 2
No Yes Drosophila mojavensis 1.3   2 2
No Yes Megaselia scalaris 22   1 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 7 7
No Yes Culex pipiens quinquefasciatus Southern house mosquito 8 7
No Yes Anopheles darlingi 22 American malaria mosquito 2 2
No Yes Anopheles gambiae 49_3j African malaria mosquito 5 5
No Yes Tribolium castaneum 3.0 Red flour beetle 8 7
No Yes Pediculus humanus corporis (Early assembly) Human body louse 2 2
No Yes Rhodnius prolixus 22   3 3
No Yes Acyrthosiphon pisum Pea aphid 3 3
No Yes Daphnia pulex Common water flea 9 9
No Yes Strigamia maritima 22   3 3
No Yes Tetranychus urticae Two-spotted spider mite 1 1
No Yes Ixodes scapularis (Preliminary) Black-legged tick 3 3
No Yes Pristionchus pacificus   5 5
No Yes Meloidogyne incognita Southern root-knot nematode 4 4
No Yes Onchocerca volvulus 22   2 2
No Yes Brugia malayi WS218 Agent of lymphatic filariasis 2 2
No Yes Caenorhabditis japonica   7 6
No Yes Caenorhabditis brenneri   4 4
No Yes Caenorhabditis remanei   5 5
No Yes Caenorhabditis elegans 76_235 Roundworm 4 4
No Yes Caenorhabditis briggsae 2   4 4
No Yes Trichinella spiralis 22   2 2
No Yes Hymenolepis microstoma   1 1
No Yes Echinococcus multilocularis   1 1
No Yes Echinococcus granulosus   1 1
No Yes Taenia solium Pork tapeworm 1 1
No Yes Schistosoma mansoni   1 1
No Yes Acropora digitifera v1.0   7 7
No Yes Nematostella vectensis 1.0 Starlet sea anemone 18 17
No Yes Hydra vulgaris   13 13
No Yes Trichoplax adhaerens   1 1
No Yes Proterospongia sp. ATCC 50818   2 2
No Yes Monosiga brevicollis   1 1
No Yes Capsaspora owczarzaki ATCC 30864   1 1
No Yes Stagonospora nodorum   1 1
No Yes Neosartorya fischeri NRRL 181   1 1
No Yes Aspergillus zonatus v1.0   1 1
No Yes Aspergillus wentii v1.0   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Dictyostelium discoideum   3 3
No Yes Dictyostelium purpureum   3 3
No Yes Entamoeba invadens 1.2   11 3
No Yes Selaginella moellendorffii   6 6
No Yes Pinus taeda Loblolly pine 1 1
No Yes Picea abies Norway spruce 2 2
No Yes Eucalyptus grandis v201 Rose gum 12 12
No Yes Theobroma cacao B97-61/B2 v1 Cacao 14 14
No Yes Gossypium raimondii v221   15 15
No Yes Citrus clementina v165   7 7
No Yes Citrus sinensis v154 Sweet orange 10 10
No Yes Thellungiella halophila v173   7 7
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 8 8
No Yes Capsella rubella v183   6 6
No Yes Arabidopsis lyrata Lyrate rockcress 6 6
No Yes Arabidopsis thaliana 10 Thale cress 6 6
No Yes Carica papaya Papaya 3 3
No Yes Medicago truncatula Barrel medic 16 16
No Yes Phaseolus vulgaris v186 French bean 9 9
No Yes Glycine max v109 Soybean 27 27
No Yes Cucumis sativus v122 Cucumber 18 18
No Yes Fragaria vesca Wild strawberry 12 11
No Yes Malus domestica v196 Apple 20 20
No Yes Prunus persica v139 Peach 13 13
No Yes Linum usitatissimum v200 Flax 15 15
No Yes Manihot esculenta v147 Cassava 18 18
No Yes Populus trichocarpa v156 Black cottonwood 18 18
No Yes Vitis vinifera Wine grape 8 8
No Yes Mimulus guttatus v140 Spotted monkey flower 21 21
No Yes Solanum lycopersicum v.2.3 Tomato 6 6
No Yes Solanum tuberosum Potato 8 8
No Yes Actinidia chinensis Hongyang   21 19
No Yes Aquilegia coerulea v195   13 13
No Yes Triticum urartu 22   1 1
No Yes Triticum aestivum 22 Bread wheat 3 3
No Yes Aegilops tauschii 22   2 2
No Yes Brachypodium distachyon   5 5
No Yes Oryza barthii 22 African wild rice 4 4
No Yes Oryza meridionalis 22   6 6
No Yes Oryza glumaepatula 22   5 5
No Yes Oryza glaberrima African rice 4 4
No Yes Oryza punctata 22   4 4
No Yes Oryza nivara 22   4 4
No Yes Oryza brachyantha 22 Malo sina 3 3
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 4 4
No Yes Oryza sativa v193 Rice 4 4
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 3 3
No Yes Zea mays subsp. mays Maize 4 4
No Yes Zea mays v181 Maize 4 4
No Yes Sorghum bicolor Sorghum 5 5
No Yes Setaria italica v164 Foxtail millet 6 6
No Yes Panicum virgatum v202 Switchgrass 10 10
No Yes Musa balbisiana Balbis banana 5 5
No Yes Musa acuminata 22 Wild Malaysian banana 3 3
No Yes Amborella trichopoda 22   3 3
No Yes Physcomitrella patens   5 5
No Yes Ostreococcus sp. RCC809   4 3
No Yes Ostreococcus lucimarinus CCE9901   5 4
No Yes Ostreococcus tauri   1 1
No Yes Bathycoccus prasinos   4 3
No Yes Micromonas sp. RCC299   5 4
No Yes Micromonas pusilla CCMP1545 v3.0   6 6
No Yes Coccomyxa subellipsoidea sp. C-169 v2   2 1
No Yes Asterochloris sp. Cgr/DA1pho v1.0   2 2
No Yes Chlorella variabilis sp. NC64A   1 1
No Yes Chlorella vulgaris   2 1
No Yes Volvox carteri f. nagariensis   3 2
No Yes Volvox carteri v199   3 2
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Cyanidioschyzon merolae strain 10D 22   2 1
No Yes Cyanidioschyzon merolae   2 1
No Yes Porphyridium purpureum 02_2012   2 1
No Yes Thecamonas trahens ATCC 50062   8 4
No Yes Bigelowiella natans CCMP2755 22   1 1
No Yes Trypanosoma congolense 2.4   1 1
No Yes Pythium arrhenomanes ATCC 12531 22   1 1
No Yes Perkinsus marinus ATCC 50983   2 2
No Yes Tetrahymena thermophila SB210 1   1 1
No Yes Trichomonas vaginalis   1 1
No Yes Guillardia theta CCMP2712 v1.0   1 1
No Yes Emiliania huxleyi CCMP1516   4 4
No Yes Brachyspira murdochii DSM 12563   1 1
No Yes Brachyspira intermedia PWS/A   1 1
No Yes Brachyspira pilosicoli 95/1000   1 1
No Yes Brachyspira hyodysenteriae WA1   1 1
No Yes Isosphaera pallida ATCC 43644   2 2
No Yes Pirellula staleyi DSM 6068   1 1
No Yes Bifidobacterium longum subsp. longum JDM301   1 1
No Yes Bifidobacterium bifidum S17   2 2
No Yes Bifidobacterium adolescentis ATCC 15703   1 1
No Yes Catenulispora acidiphila DSM 44928   12 9
No Yes Stackebrandtia nassauensis DSM 44728   22 19
No Yes Acidothermus cellulolyticus 11B   3 2
No Yes Nakamurella multipartita DSM 44233   8 4
No Yes Modestobacter marinus   3 2
No Yes Blastococcus saxobsidens DD2   2 1
No Yes Geodermatophilus obscurus DSM 43160   4 3
No Yes Frankia symbiont of Datisca glomerata   8 6
No Yes Frankia sp. EAN1pec   7 6
No Yes Frankia alni ACN14a   8 6
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   5 4
No Yes Thermomonospora curvata DSM 43183   6 5
No Yes Streptosporangium roseum DSM 43021   8 8
No Yes Kitasatospora setae KM-6054   7 6
No Yes Streptomyces coelicolor A3(2)   8 8
No Yes Streptomyces sp. PAMC26508   9 8
No Yes Streptomyces flavogriseus ATCC 33331   7 6
No Yes Streptomyces sp. SirexAA-E   9 7
No Yes Streptomyces griseus subsp. griseus NBRC 13350   15 12
No Yes Streptomyces bingchenggensis BCW-1   6 6
No Yes Streptomyces violaceusniger Tu 4113   10 9
No Yes Streptomyces avermitilis MA-4680   5 5
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   2 2
No Yes Streptomyces scabiei 87.22   16 13
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   16 11
No Yes Thermobispora bispora DSM 43833   1 1
No Yes Actinosynnema mirum DSM 43827   7 6
No Yes Saccharomonospora viridis DSM 43017   7 5
No Yes Pseudonocardia dioxanivorans CB1190   4 3
No Yes Saccharopolyspora erythraea NRRL 2338   7 4
No Yes Amycolatopsis mediterranei U32   13 11
No Yes Kribbella flavida DSM 17836   11 10
No Yes Nocardioides sp. JS614   3 2
No Yes Microlunatus phosphovorus NM-1   6 5
No Yes Propionibacterium propionicum F0230a   2 1
No Yes Propionibacterium acnes SK137   1 1
No Yes Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1   2 1
No Yes Salinispora arenicola CNS-205   6 5
No Yes Salinispora tropica CNB-440   6 4
No Yes Verrucosispora maris AB-18-032   10 8
No Yes Micromonospora sp. L5   6 4
No Yes Micromonospora aurantiaca ATCC 27029   6 4
No Yes Actinoplanes sp. N902-109   9 6
No Yes Actinoplanes sp. SE50/110   11 7
No Yes Actinoplanes missouriensis 431   7 5
No Yes Segniliparus rotundus DSM 44985   3 2
No Yes Tsukamurella paurometabola DSM 20162   2 1
No Yes Gordonia sp. KTR9   2 1
No Yes Gordonia polyisoprenivorans VH2   2 1
No Yes Gordonia bronchialis DSM 43247   2 1
No Yes Rhodococcus jostii RHA1   2 1
No Yes Rhodococcus equi 103S   2 1
No Yes Rhodococcus opacus B4   2 1
No Yes Rhodococcus erythropolis PR4   3 2
No Yes Nocardia cyriacigeorgica GUH-2   3 2
No Yes Nocardia farcinica IFM 10152   2 1
No Yes Amycolicicoccus subflavus DQS3-9A1   3 2
No Yes Mycobacterium abscessus ATCC 19977   3 2
No Yes Mycobacterium massiliense str. GO 06   2 1
No Yes Mycobacterium sp. JLS   3 2
No Yes Mycobacterium intracellulare ATCC 13950   2 1
No Yes Mycobacterium avium 104   2 1
No Yes Mycobacterium vanbaalenii PYR-1   3 2
No Yes Mycobacterium canettii CIPT 140010059   2 1
No Yes Mycobacterium africanum GM041182   2 1
No Yes Mycobacterium tuberculosis KZN 1435   2 1
No Yes Mycobacterium tuberculosis   2 1
No Yes Mycobacterium bovis BCG str. Pasteur 1173P2   4 2
No Yes Mycobacterium rhodesiae NBB3   2 1
No Yes Mycobacterium ulcerans Agy99   2 1
No Yes Mycobacterium gilvum PYR-GCK   3 2
No Yes Mycobacterium chubuense NBB4   3 2
No Yes Mycobacterium marinum M   2 1
No Yes Mycobacterium smegmatis str. MC2 155   3 2
No Yes Mycobacterium leprae Br4923   2 1
No Yes Corynebacterium resistens DSM 45100   2 1
No Yes Corynebacterium aurimucosum ATCC 700975   2 1
No Yes Corynebacterium kroppenstedtii DSM 44385   2 1
No Yes Corynebacterium efficiens YS-314   2 1
No Yes Corynebacterium ulcerans 0102   2 1
No Yes Corynebacterium urealyticum DSM 7109   2 1
No Yes Corynebacterium jeikeium K411   2 1
No Yes Corynebacterium variabile DSM 44702   2 1
No Yes Corynebacterium pseudotuberculosis 316   2 1
No Yes Corynebacterium glutamicum R   2 1
No Yes Corynebacterium diphtheriae NCTC 13129   2 1
No Yes Sanguibacter keddieii DSM 10542   3 3
No Yes Kytococcus sedentarius DSM 20547   4 3
No Yes Beutenbergia cavernae DSM 12333   3 3
No Yes Leifsonia xyli subsp. xyli str. CTCB07   1 1
No Yes Clavibacter michiganensis subsp. michiganensis NCPPB 382   2 2
No Yes Jonesia denitrificans DSM 20603   3 3
No Yes Intrasporangium calvum DSM 43043   9 3
No Yes Brachybacterium faecium DSM 4810   4 3
No Yes Isoptericola variabilis 225   1 1
No Yes Xylanimonas cellulosilytica DSM 15894   8 8
No Yes Cellulomonas flavigena DSM 20109   3 3
No Yes Cellulomonas fimi ATCC 484   7 6
No Yes [Cellvibrio] gilvus ATCC 13127   1 1
No Yes Kocuria rhizophila DC2201   2 1
No Yes Rothia mucilaginosa DY-18   1 1
No Yes Arthrobacter sp. Rue61a   1 1
No Yes Arthrobacter phenanthrenivorans Sphe3   1 1
No Yes Renibacterium salmoninarum ATCC 33209   1 1
No Yes Mobiluncus curtisii ATCC 43063   1 1
No Yes Arcanobacterium haemolyticum DSM 20595   1 1
No Yes Actinomyces sp. F0330   2 2
No Yes Olsenella uli DSM 7084   2 1
No Yes Cryptobacterium curtum DSM 15641   2 1
No Yes Eggerthella sp. YY7918   2 1
No Yes Eggerthella lenta DSM 2243   2 1
No Yes Slackia heliotrinireducens DSM 20476   1 1
No Yes Coriobacterium glomerans PW2   2 1
No Yes Atopobium parvulum DSM 20469   2 1
No Yes Conexibacter woesei DSM 14684   13 9
No Yes Rubrobacter xylanophilus DSM 9941   2 1
No Yes Ilumatobacter coccineus   18 13
No Yes Acidimicrobium ferrooxidans DSM 10331   2 1
No Yes Desulfurispirillum indicum S5   1 1
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270   1 1
No Yes Herpetosiphon aurantiacus DSM 785   15 8
No Yes Roseiflexus sp. RS-1   2 2
No Yes Roseiflexus castenholzii DSM 13941   4 4
No Yes Chloroflexus sp. Y-400-fl   1 1
No Yes Chloroflexus aggregans DSM 9485   1 1
No Yes Chloroflexus aurantiacus J-10-fl   1 1
No Yes Thermovibrio ammonificans HB-1   1 1
No Yes Sulfurihydrogenibium sp. YO3AOP1   1 1
No Yes Candidatus Koribacter versatilis Ellin345   3 3
No Yes Candidatus Chloracidobacterium thermophilum B   5 4
No Yes Candidatus Solibacter usitatus Ellin6076   5 5
No Yes Granulicella tundricola MP5ACTX9   3 3
No Yes Granulicella mallensis MP5ACTX8   2 2
No Yes Terriglobus saanensis SP1PR4   3 3
No Yes Terriglobus roseus DSM 18391   3 3
No Yes Acidobacterium capsulatum ATCC 51196   1 1
No Yes Pelodictyon phaeoclathratiforme BU-1   1 1
No Yes Chlorobium luteolum DSM 273   1 1
No Yes Chlorobium chlorochromatii CaD3   1 1
No Yes Chlorobium phaeobacteroides DSM 266   1 1
No Yes Chlorobium phaeovibrioides DSM 265   1 1
No Yes Chlorobium limicola DSM 245   1 1
No Yes Chlorobaculum parvum NCIB 8327   2 2
No Yes Chlorobium tepidum TLS   1 1
No Yes Prosthecochloris aestuarii DSM 271   2 2
No Yes Candidatus Cardinium hertigii   1 1
No Yes Belliella baltica DSM 15883   1 1
No Yes Cyclobacterium marinum DSM 745   2 2
No Yes Dyadobacter fermentans DSM 18053   1 1
No Yes Flexibacter litoralis DSM 6794   1 1
No Yes Cytophaga hutchinsonii ATCC 33406   3 3
No Yes Spirosoma linguale DSM 74   1 1
No Yes Runella slithyformis DSM 19594   1 1
No Yes Bacteroides fragilis YCH46   1 1
No Yes Niastella koreensis GR20-10   2 2
No Yes Chitinophaga pinensis DSM 2588   3 3
No Yes Haliscomenobacter hydrossis DSM 1100   3 3
No Yes Saprospira grandis str. Lewin   10 10
No Yes Solitalea canadensis DSM 3403   4 4
No Yes Pedobacter saltans DSM 12145   1 1
No Yes Sphingobacterium sp. 21   1 1
No Yes Fluviicola taffensis DSM 16823   1 1
No Yes Owenweeksia hongkongensis DSM 17368   1 1
No Yes Zunongwangia profunda SM-A87   1 1
No Yes Gramella forsetii KT0803   1 1
No Yes Lacinutrix sp. 5H-3-7-4   1 1
No Yes Robiginitalea biformata HTCC2501   1 1
No Yes Aequorivita sublithincola DSM 14238   1 1
No Yes Flavobacteriaceae bacterium 3519-10   2 2
No Yes Polaribacter sp. MED152   1 1
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   1 1
No Yes Ornithobacterium rhinotracheale DSM 15997   1 1
No Yes Capnocytophaga ochracea DSM 7271   1 1
No Yes Weeksella virosa DSM 16922   1 1
No Yes Flavobacterium indicum GPTSA100-9   1 1
No Yes Flavobacterium psychrophilum JIP02/86   1 1
No Yes Flavobacterium branchiophilum FL-15   1 1
No Yes Flavobacterium columnare ATCC 49512   1 1
No Yes Flavobacterium johnsoniae UW101   3 3
No Yes Coraliomargarita akajimensis DSM 45221   1 1
No Yes Leptospirillum ferrooxidans C2-3   1 1
No Yes Sebaldella termitidis ATCC 33386   4 4
No Yes Leptotrichia buccalis C-1013-b   1 1
No Yes Ilyobacter polytropus DSM 2926   1 1
No Yes Fusobacterium nucleatum subsp. nucleatum ATCC 25586   1 1
No Yes Candidatus Methylomirabilis oxyfera   1 1
No Yes candidate division SR1 bacterium RAAC1_SR1_1   4 4
No Yes Candidatus Saccharimonas aalborgensis   2 2
No Yes Truepera radiovictrix DSM 17093   2 1
No Yes Deinococcus deserti VCD115   4 3
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Deinococcus geothermalis DSM 11300   1 1
No Yes Deinococcus radiodurans R1   1 1
No Yes Marinithermus hydrothermalis DSM 14884   1 1
No Yes Thermus sp. CCB_US3_UF1   1 1
No Yes Acidaminococcus intestini RyC-MR95   3 3
No Yes Acidaminococcus fermentans DSM 20731   3 3
No Yes Megamonas hypermegale   2 2
No Yes Veillonella parvula DSM 2008   2 2
No Yes Selenomonas sputigena ATCC 35185   3 3
No Yes Selenomonas ruminantium subsp. lactilytica TAM6421   4 4
No Yes Megasphaera elsdenii DSM 20460   4 3
No Yes Erysipelothrix rhusiopathiae str. Fujisawa   1 1
No Yes Natranaerobius thermophilus JW/NM-WN-LF   1 1
No Yes Clostridium clariflavum DSM 19732   8 7
No Yes Eubacterium siraeum   1 1
No Yes Clostridium thermocellum ATCC 27405   9 7
No Yes Ethanoligenens harbinense YUAN-3   2 2
No Yes Faecalibacterium prausnitzii   10 4
No Yes Ruminococcus sp.   1 1
No Yes Ruminococcus bromii   4 3
No Yes Ruminococcus albus 7   2 2
No Yes Symbiobacterium thermophilum IAM 14863   4 4
No Yes Thermaerobacter marianensis DSM 12885   2 2
No Yes Sulfobacillus acidophilus DSM 10332   16 9
No Yes Oscillibacter valericigenes Sjm18-20   1 1
No Yes butyrate-producing bacterium SSC/2   4 4
No Yes butyrate-producing bacterium SS3/4   1 1
No Yes butyrate-producing bacterium SM4/1   1 1
No Yes Candidatus Desulforudis audaxviator MP104C   2 1
No Yes Thermincola potens JR   6 4
No Yes Pelotomaculum thermopropionicum SI   2 2
No Yes Desulfosporosinus acidiphilus SJ4   8 6
No Yes Desulfosporosinus orientis DSM 765   5 4
No Yes Dehalobacter sp. DCA   6 5
No Yes Dehalobacter sp. CF   6 5
No Yes Syntrophobotulus glycolicus DSM 8271   7 5
No Yes Desulfitobacterium hafniense Y51   7 4
No Yes Desulfitobacterium dehalogenans ATCC 51507   6 4
No Yes Desulfotomaculum carboxydivorans CO-1-SRB   4 3
No Yes Desulfotomaculum reducens MI-1   4 3
No Yes Desulfotomaculum acetoxidans DSM 771   4 3
No Yes Desulfotomaculum kuznetsovii DSM 6115   4 3
No Yes Desulfotomaculum ruminis DSM 2154   4 3
No Yes Acetobacterium woodii DSM 1030   5 3
No Yes Eubacterium rectale M104/1   1 1
No Yes Eubacterium rectale ATCC 33656   1 1
No Yes Eubacterium eligens ATCC 27750   1 1
No Yes Eubacterium limosum KIST612   12 7
No Yes Clostridium difficile 630   2 2
No Yes Clostridium saccharolyticum WM1   5 2
No Yes Clostridium phytofermentans ISDg   10 6
No Yes Clostridium lentocellum DSM 5427   2 2
No Yes [Ruminococcus] obeum   2 2
No Yes [Ruminococcus] torques   1 1
No Yes Coprococcus sp. ART55/1   1 1
No Yes Roseburia hominis A2-183   2 2
No Yes Roseburia intestinalis   2 2
No Yes Syntrophothermus lipocalidus DSM 12680   8 4
No Yes Syntrophomonas wolfei subsp. wolfei str. Goettingen   12 8
No Yes Heliobacterium modesticaldum Ice1   5 3
No Yes Alkaliphilus oremlandii OhILAs   4 4
No Yes Alkaliphilus metalliredigens QYMF   8 7
No Yes Candidatus Arthromitus sp. SFB-mouse-Japan   4 2
No Yes Clostridium sp. BNL1100   10 7
No Yes Clostridium novyi NT   4 4
No Yes Clostridium ljungdahlii DSM 13528   6 6
No Yes Clostridium kluyveri DSM 555   7 7
No Yes Clostridium cellulolyticum H10   9 6
No Yes Clostridium beijerinckii NCIMB 8052   7 5
No Yes Clostridium tetani E88   5 5
No Yes Clostridium perfringens ATCC 13124   1 1
No Yes Clostridium cellulovorans 743B   13 10
No Yes Clostridium botulinum A str. ATCC 3502   5 5
No Yes Clostridium acetobutylicum ATCC 824   19 13
No Yes Mahella australiensis 50-1 BON   3 3
No Yes Thermosediminibacter oceani DSM 16646   6 6
No Yes Caldicellulosiruptor obsidiansis OB47   3 3
No Yes Caldicellulosiruptor kronotskyensis 2002   3 3
No Yes Caldicellulosiruptor hydrothermalis 108   3 3
No Yes Caldicellulosiruptor owensensis OL   3 3
No Yes Caldicellulosiruptor lactoaceticus 6A   3 3
No Yes Caldicellulosiruptor kristjanssonii 177R1B   3 3
No Yes Caldicellulosiruptor saccharolyticus DSM 8903   3 3
No Yes Caldicellulosiruptor bescii DSM 6725   3 3
No Yes Thermoanaerobacterium xylanolyticum LX-11   4 4
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571   4 4
No Yes Thermodesulfobium narugense DSM 14796   1 1
No Yes Coprothermobacter proteolyticus DSM 5265   1 1
No Yes Tepidanaerobacter acetatoxydans Re1   6 5
No Yes Thermoanaerobacter tengcongensis MB4   8 5
No Yes Carboxydothermus hydrogenoformans Z-2901   4 4
No Yes Moorella thermoacetica ATCC 39073   2 1
No Yes Ammonifex degensii KC4   2 2
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   5 5
No Yes Thermoanaerobacter pseudethanolicus ATCC 33223   10 7
No Yes Thermoanaerobacter sp. X514   9 6
No Yes Thermoanaerobacter italicus Ab9   5 5
No Yes Thermoanaerobacter wiegelii Rt8.B1   6 6
No Yes Thermoanaerobacter brockii subsp. finnii Ako-1   10 7
No Yes Acetohalobium arabaticum DSM 5501   4 3
No Yes Halothermothrix orenii H 168   7 7
No Yes Halanaerobium hydrogeniformans   4 4
No Yes Halanaerobium praevalens DSM 2228   3 3
No Yes Carnobacterium sp. WN1359   1 1
No Yes Carnobacterium sp. 17-4   2 2
No Yes Aerococcus urinae ACS-120-V-Col10a   1 1
No Yes Tetragenococcus halophilus NBRC 12172   1 1
No Yes Melissococcus plutonius DAT561   1 1
No Yes Enterococcus sp. 7L76   1 1
No Yes Enterococcus faecalis 62   1 1
No Yes Weissella koreensis KACC 15510   1 1
No Yes Lactobacillus casei ATCC 334   2 2
No Yes Lactobacillus rhamnosus Lc 705   3 3
No Yes Lactobacillus johnsonii FI9785   1 1
No Yes Lactobacillus ruminis ATCC 27782   1 1
No Yes Lactobacillus gasseri ATCC 33323   1 1
No Yes Lactobacillus plantarum JDM1   1 1
No Yes Lactobacillus helveticus DPC 4571   1 1
No Yes Lactobacillus brevis ATCC 367   1 1
No Yes Lactobacillus acidophilus 30SC   1 1
No Yes Pediococcus claussenii ATCC BAA-344   2 2
No Yes Pediococcus pentosaceus ATCC 25745   1 1
No Yes Exiguobacterium sp. MH3   4 4
No Yes Exiguobacterium sp. AT1b   1 1
No Yes Exiguobacterium sibiricum 255-15   3 3
No Yes Kyrpidia tusciae DSM 2912   6 5
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446   5 4
No Yes Brevibacillus brevis NBRC 100599   6 5
No Yes Paenibacillus sp. JDR-2   6 6
No Yes Paenibacillus terrae HPL-003   3 3
No Yes Paenibacillus mucilaginosus 3016   6 6
No Yes Paenibacillus polymyxa M1   3 3
No Yes Bacillus selenitireducens MLS10   5 2
No Yes Listeria welshimeri serovar 6b str. SLCC5334   1 1
No Yes Listeria innocua Clip11262   1 1
No Yes Listeria seeligeri serovar 1/2b str. SLCC3954   1 1
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459   1 1
No Yes Listeria ivanovii subsp. ivanovii PAM 55   1 1
No Yes Solibacillus silvestris StLB046   3 3
No Yes Lysinibacillus sphaericus C3-41   1 1
No Yes Oceanobacillus iheyensis HTE831   25 9
No Yes Anoxybacillus flavithermus WK1   3 3
No Yes Geobacillus thermoleovorans CCB_US3_UF5   8 4
No Yes Geobacillus sp. JF8   6 3
No Yes Geobacillus sp. GHH01   6 3
No Yes Geobacillus sp. WCH70   6 3
No Yes Geobacillus thermodenitrificans NG80-2   8 3
No Yes Geobacillus kaustophilus HTA426   6 3
No Yes Geobacillus thermoglucosidasius C56-YS93   6 3
No Yes Halobacillus halophilus DSM 2266   7 6
No Yes Bacillus sp. JS   5 5
No Yes Bacillus sp. 1NLA3E   4 4
No Yes Bacillus atrophaeus 1942   8 7
No Yes Bacillus subtilis subsp. subtilis str. 168   11 9
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   8 6
No Yes Bacillus amyloliquefaciens FZB42   9 7
No Yes Bacillus halodurans C-125   29 8
No Yes Bacillus weihenstephanensis KBAB4   2 2
No Yes Bacillus thuringiensis str. Al Hakam   2 2
No Yes Bacillus cereus 03BB102   2 2
No Yes Bacillus anthracis str. A0248   2 2
No Yes Bacillus pseudofirmus OF4   14 7
No Yes Bacillus clausii KSM-K16   17 9
No Yes Bacillus cellulosilyticus DSM 2522   16 6
No Yes Bacillus pumilus SAFR-032   5 5
No Yes Bacillus megaterium DSM 319   17 13
No Yes Bacillus coagulans 2-6   3 3
No Yes Macrococcus caseolyticus JCSC5402   1 1
No Yes Staphylococcus pseudintermedius HKU10-03   1 1
No Yes Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305   1 1
No Yes Staphylococcus lugdunensis HKU09-01   1 1
No Yes Staphylococcus haemolyticus JCSC1435   1 1
No Yes Staphylococcus epidermidis RP62A   1 1
No Yes Staphylococcus carnosus subsp. carnosus TM300   1 1
No Yes Staphylococcus aureus subsp. aureus JH1   1 1
No Yes Staphylococcus aureus   1 1
No Yes Nitratifractor salsuginis DSM 16511   5 4
No Yes Arcobacter sp. L   2 2
No Yes Nitratiruptor sp. SB155-2   1 1
No Yes Sulfurovum sp. NBC37-1   6 6
No Yes Bdellovibrio bacteriovorus HD100   4 4
No Yes Desulfobacca acetoxidans DSM 11109   2 1
No Yes Syntrophus aciditrophicus SB   4 4
No Yes Syntrophobacter fumaroxidans MPOB   1 1
No Yes Desulfurivibrio alkaliphilus AHT2   2 2
No Yes Desulfotalea psychrophila LSv54   3 3
No Yes Desulfobulbus propionicus DSM 2032   3 3
No Yes Desulfatibacillum alkenivorans AK-01   2 2
No Yes Desulfobacterium autotrophicum HRM2   4 4
No Yes Desulfomicrobium baculatum DSM 4028   2 2
No Yes Desulfovibrio magneticus RS-1   1 1
No Yes Pelobacter propionicus DSM 2379   1 1
No Yes Pelobacter carbinolicus DSM 2380   1 1
No Yes Geobacter daltonii FRC-32   1 1
No Yes Geobacter sp. M21   2 2
No Yes Geobacter uraniireducens Rf4   2 2
No Yes Geobacter lovleyi SZ   1 1
No Yes Geobacter bemidjiensis Bem   1 1
No Yes Geobacter sulfurreducens KN400   1 1
No Yes Geobacter metallireducens GS-15   4 4
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Sorangium cellulosum 'So ce 56'   9 9
No Yes Anaeromyxobacter sp. Fw109-5   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-1   1 1
No Yes Stigmatella aurantiaca DW4/3-1   10 7
No Yes Corallococcus coralloides DSM 2259   4 4
No Yes Myxococcus xanthus DK 1622   8 7
No Yes Myxococcus fulvus HW-1   6 4
No Yes Aromatoleum aromaticum EbN1   2 2
No Yes Dechloromonas aromatica RCB   1 1
No Yes Thauera sp. MZ1T   4 4
No Yes Azoarcus sp. KH32C   3 3
No Yes Azoarcus sp. BH72   4 4
No Yes Pseudogulbenkiania sp. NH8B   1 1
No Yes Laribacter hongkongensis HLHK9   2 2
No Yes Chromobacterium violaceum ATCC 12472   3 3
No Yes Methylotenera versatilis 301   1 1
No Yes Methylotenera mobilis JLW8   1 1
No Yes Methylobacillus flagellatus KT   1 1
No Yes Thiobacillus denitrificans ATCC 25259   1 1
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   3 3
No Yes Methylibium petroleiphilum PM1   1 1
No Yes Thiomonas intermedia K12   1 1
No Yes Rubrivivax gelatinosus IL144   3 3
No Yes Leptothrix cholodnii SP-6   5 4
No Yes Ralstonia eutropha JMP134   1 1
No Yes Cupriavidus taiwanensis LMG 19424   2 2
No Yes Cupriavidus metallidurans CH34   1 1
No Yes Cupriavidus necator N-1   1 1
No Yes Ralstonia eutropha H16   1 1
No Yes Ralstonia solanacearum CFBP2957   2 2
No Yes Burkholderia sp. RPE64   1 1
No Yes Burkholderia rhizoxinica HKI 454   1 1
No Yes Burkholderia phymatum STM815   1 1
No Yes Burkholderia thailandensis E264   4 4
No Yes Burkholderia pseudomallei 1106a   3 3
No Yes Burkholderia mallei SAVP1   3 3
No Yes Burkholderia ambifaria AMMD   1 1
No Yes Burkholderia cenocepacia HI2424   1 1
No Yes Burkholderia multivorans ATCC 17616   2 2
No Yes Burkholderia vietnamiensis G4   1 1
No Yes Burkholderia xenovorans LB400   2 2
No Yes Burkholderia gladioli BSR3   2 2
No Yes Burkholderia glumae BGR1   2 2
No Yes Alicycliphilus denitrificans K601   6 5
No Yes Ramlibacter tataouinensis TTB310   1 1
No Yes Delftia sp. Cs1-4   5 5
No Yes Delftia acidovorans SPH-1   5 5
No Yes Polaromonas sp. JS666   1 1
No Yes Polaromonas naphthalenivorans CJ2   5 4
No Yes Variovorax paradoxus S110   1 1
No Yes Rhodoferax ferrireducens T118   2 2
No Yes Acidovorax ebreus TPSY   4 4
No Yes Acidovorax sp. KKS102   2 2
No Yes Acidovorax sp. JS42   4 4
No Yes Acidovorax citrulli AAC00-1   4 4
No Yes Acidovorax avenae subsp. avenae ATCC 19860   4 4
No Yes Comamonas testosteroni CNB-2   1 1
No Yes Janthinobacterium sp. Marseille   1 1
No Yes Pusillimonas sp. T7-7   1 1
No Yes Advenella kashmirensis WT001   3 3
No Yes Taylorella asinigenitalis MCE3   2 2
No Yes Taylorella equigenitalis MCE9   4 4
No Yes Bordetella petrii DSM 12804   4 3
No Yes Bordetella avium 197N   2 2
No Yes Bordetella pertussis Tohama I   2 2
No Yes Bordetella parapertussis 12822   2 2
No Yes Bordetella bronchiseptica RB50   3 3
No Yes Achromobacter xylosoxidans A8   3 3
No Yes Achromobacter xylosoxidans   3 3
No Yes Nitrosomonas sp. Is79A3   4 4
No Yes Nitrosomonas eutropha C91   2 2
No Yes Nitrosomonas europaea ATCC 19718   3 3
No Yes Magnetococcus marinus MC-1   2 2
No Yes Parvularcula bermudensis HTCC2503   5 5
No Yes Asticcacaulis excentricus CB 48   4 4
No Yes Brevundimonas subvibrioides ATCC 15264   6 6
No Yes Caulobacter sp. K31   5 5
No Yes Caulobacter crescentus NA1000   4 4
No Yes Caulobacter segnis ATCC 21756   4 4
No Yes Phenylobacterium zucineum HLK1   6 6
No Yes Erythrobacter litoralis HTCC2594   4 3
No Yes Sphingopyxis alaskensis RB2256   1 1
No Yes Novosphingobium sp. PP1Y   2 2
No Yes Novosphingobium aromaticivorans DSM 12444   2 2
No Yes Sphingobium sp. SYK-6   2 2
No Yes Sphingobium japonicum UT26S   4 4
No Yes Sphingobium chlorophenolicum L-1   3 3
No Yes Sphingomonas sp. MM-1   1 1
No Yes Sphingomonas wittichii RW1   2 2
No Yes Zymomonas mobilis subsp. mobilis NCIMB 11163   1 1
No Yes Maricaulis maris MCS10   5 5
No Yes Hirschia baltica ATCC 49814   8 8
No Yes Hyphomonas neptunium ATCC 15444   4 4
No Yes Dinoroseobacter shibae DFL 12   8 8
No Yes Phaeobacter gallaeciensis 2.10   8 8
No Yes Pseudovibrio sp. FO-BEG1   10 9
No Yes Jannaschia sp. CCS1   9 8
No Yes Ruegeria sp. TM1040   6 6
No Yes Ruegeria pomeroyi DSS-3   8 8
No Yes Ketogulonicigenium vulgare Y25   6 4
No Yes Ketogulonigenium vulgarum WSH-001   7 5
No Yes Roseobacter litoralis Och 149   6 6
No Yes Roseobacter denitrificans OCh 114   6 6
No Yes Rhodobacter sphaeroides ATCC 17029   8 8
No Yes Rhodobacter capsulatus SB 1003   9 9
No Yes Paracoccus denitrificans PD1222   10 9
No Yes Tistrella mobilis KA081020-065   2 2
No Yes Magnetospirillum magneticum AMB-1   3 3
No Yes Rhodospirillum centenum SW   4 4
No Yes Rhodospirillum rubrum F11   4 4
No Yes Rhodospirillum photometricum DSM 122   3 3
No Yes Azospirillum lipoferum 4B   8 8
No Yes Azospirillum sp. B510   8 8
No Yes Azospirillum brasilense Sp245   8 8
No Yes Gluconacetobacter xylinus NBRC 3288   1 1
No Yes Granulibacter bethesdensis CGDNIH1   1 1
No Yes Acidiphilium multivorum AIU301   1 1
No Yes Acidiphilium cryptum JF-5   1 1
No Yes Polymorphum gilvum SL003B-26A1   15 14
No Yes Micavibrio aeruginosavorus ARL-13   6 6
No Yes alpha proteobacterium HIMB5   1 1
No Yes Candidatus Midichloria mitochondrii IricVA   1 1
No Yes Rickettsia canadensis str. McKiel   2 2
No Yes Rickettsia philipii str. 364D   2 2
No Yes Rickettsia heilongjiangensis 054   2 2
No Yes Rickettsia peacockii str. Rustic   1 1
No Yes Rickettsia felis URRWXCal2   1 1
No Yes Rickettsia slovaca 13-B   2 2
No Yes Rickettsia parkeri str. Portsmouth   2 2
No Yes Rickettsia massiliae MTU5   2 2
No Yes Rickettsia japonica YH   2 2
No Yes Rickettsia africae ESF-5   2 2
No Yes Rickettsia rhipicephali str. 3-7-female6-CWPP   2 2
No Yes Rickettsia montanensis str. OSU 85-930   2 2
No Yes Candidatus Rickettsia amblyommii str. GAT-30V   1 1
No Yes Rickettsia australis str. Cutlack   1 1
No Yes Rickettsia akari str. Hartford   1 1
No Yes Rickettsia rickettsii str. 'Sheila Smith'   2 2
No Yes Rickettsia conorii str. Malish 7   2 2
No Yes Starkeya novella DSM 506   12 11
No Yes Xanthobacter autotrophicus Py2   11 10
No Yes Azorhizobium caulinodans ORS 571   10 9
No Yes Methylobacterium chloromethanicum CM4   13 13
No Yes Methylobacterium extorquens AM1   10 10
No Yes Methylobacterium sp. 4-46   11 11
No Yes Methylobacterium populi BJ001   12 12
No Yes Methylobacterium nodulans ORS 2060   11 11
No Yes Methylobacterium radiotolerans JCM 2831   14 12
No Yes Parvibaculum lavamentivorans DS-1   6 6
No Yes Ochrobactrum anthropi ATCC 49188   10 9
No Yes Brucella microti CCM 4915   8 7
No Yes Brucella pinnipedialis B2/94   9 8
No Yes Brucella canis ATCC 23365   7 6
No Yes Brucella suis ATCC 23445   7 6
No Yes Brucella melitensis ATCC 23457   8 7
No Yes Brucella ovis ATCC 25840   8 7
No Yes Brucella abortus S19   8 7
No Yes Sinorhizobium fredii NGR234   12 11
No Yes Sinorhizobium medicae WSM419   13 12
No Yes Sinorhizobium meliloti AK83   13 12
No Yes Genome sequence of Rhizobium sp. strain IRBG74   12 11
No Yes Rhizobium etli CIAT 652   11 10
No Yes Rhizobium leguminosarum bv. viciae 3841   14 12
No Yes Agrobacterium tumefaciens str. C58   11 10
No Yes Agrobacterium radiobacter K84   9 9
No Yes Agrobacterium sp. H13-3   12 11
No Yes Agrobacterium vitis S4   11 10
No Yes Candidatus Liberibacter asiaticus str. psy62   1 1
No Yes Mesorhizobium sp. BNC1   11 10
No Yes Mesorhizobium opportunistum WSM2075   10 9
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   11 10
No Yes Mesorhizobium loti MAFF303099   11 10
No Yes Methylocella silvestris BL2   8 8
No Yes Beijerinckia indica subsp. indica ATCC 9039   6 6
No Yes Pelagibacterium halotolerans B2   8 7
No Yes Rhodomicrobium vannielii ATCC 17100   9 9
No Yes Hyphomicrobium sp. MC1   9 8
No Yes Hyphomicrobium denitrificans ATCC 51888   10 9
No Yes Oligotropha carboxidovorans OM4   7 7
No Yes Rhodopseudomonas palustris BisA53   9 9
No Yes Nitrobacter winogradskyi Nb-255   7 7
No Yes Nitrobacter hamburgensis X14   11 11
No Yes Bradyrhizobium japonicum USDA 110   16 16
No Yes Bradyrhizobium sp. ORS 278   13 13
No Yes Methylocystis sp. SC2   6 6
No Yes Bartonella tribocorum CIP 105476   3 3
No Yes Bartonella clarridgeiae 73   3 3
No Yes Bartonella henselae str. Houston-1   4 3
No Yes Bartonella grahamii as4aup   3 3
No Yes Bartonella quintana str. Toulouse   4 3
No Yes Bartonella bacilliformis KC583   4 4
No Yes Aggregatibacter aphrophilus NJ8700   1 1
No Yes Actinobacillus succinogenes 130Z   1 1
No Yes Oceanimonas sp. GK1   4 4
No Yes Tolumonas auensis DSM 9187   2 2
No Yes Aeromonas veronii B565   4 4
No Yes Aeromonas salmonicida subsp. salmonicida A449   4 4
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   3 3
No Yes Aliivibrio salmonicida LFI1238   5 5
No Yes Vibrio fischeri MJ11   3 3
No Yes Vibrio harveyi ATCC BAA-1116   1 1
No Yes Vibrio parahaemolyticus RIMD 2210633   2 2
No Yes Vibrio sp. Ex25   2 2
No Yes Vibrio anguillarum 775   3 3
No Yes Vibrio splendidus LGP32   2 2
No Yes Vibrio furnissii NCTC 11218   3 3
No Yes Vibrio vulnificus MO6-24/O   2 2
No Yes Vibrio cholerae O395   3 3
No Yes Photobacterium profundum SS9   2 2
No Yes Psychromonas ingrahamii 37   3 3
No Yes Psychromonas sp. CNPT3   1 1
No Yes Idiomarina loihiensis L2TR   1 1
No Yes Ferrimonas balearica DSM 9799   3 3
No Yes Shewanella piezotolerans WP3   4 4
No Yes Shewanella loihica PV-4   3 3
No Yes Shewanella halifaxensis HAW-EB4   4 4
No Yes Shewanella sediminis HAW-EB3   4 4
No Yes Shewanella denitrificans OS217   3 3
No Yes Shewanella pealeana ATCC 700345   4 4
No Yes Shewanella oneidensis MR-1   4 4
No Yes Shewanella baltica OS185   3 3
No Yes Shewanella woodyi ATCC 51908   4 4
No Yes Shewanella sp. MR-4   4 4
No Yes Shewanella amazonensis SB2B   3 3
No Yes Shewanella violacea DSS12   5 5
No Yes Shewanella frigidimarina NCIMB 400   3 3
No Yes Shewanella putrefaciens CN-32   3 3
No Yes Colwellia psychrerythraea 34H   2 2
No Yes Pseudoalteromonas sp. SM9913   1 1
No Yes Pseudoalteromonas atlantica T6c   3 3
No Yes Teredinibacter turnerae T7901   1 1
No Yes Saccharophagus degradans 2-40   2 2
No Yes Glaciecola sp. 4H-3-7+YE-5   3 3
No Yes Glaciecola nitratireducens FR1064   2 2
No Yes Marinobacter adhaerens HP15   5 5
No Yes Marinobacter sp. BSs20148   2 2
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   5 5
No Yes Marinobacter aquaeolei VT8   6 6
No Yes Alteromonas sp. SN2   3 3
No Yes Alteromonas macleodii str. 'Deep ecotype'   2 2
No Yes Hahella chejuensis KCTC 2396   6 6
No Yes Kangiella koreensis DSM 16069   2 2
No Yes Alcanivorax borkumensis SK2   2 2
No Yes Marinomonas posidonica IVIA-Po-181   1 1
No Yes Marinomonas sp. MWYL1   2 2
No Yes Marinomonas mediterranea MMB-1   1 1
No Yes Chromohalobacter salexigens DSM 3043   2 2
No Yes Halomonas elongata DSM 2581   3 3
No Yes Methylomicrobium alcaliphilum   3 3
No Yes Methylomonas methanica MC09   2 2
No Yes Methylococcus capsulatus str. Bath   3 3
No Yes Dichelobacter nodosus VCS1703A   4 3
No Yes Pseudoxanthomonas spadix BD-a59   2 2
No Yes Pseudoxanthomonas suwonensis 11-1   1 1
No Yes Rhodanobacter denitrificans   2 2
No Yes Frateuria aurantia DSM 6220   2 2
No Yes Stenotrophomonas maltophilia K279a   5 4
No Yes Xanthomonas axonopodis pv. citri str. 306   7 7
No Yes Xanthomonas albilineans GPE PC73   2 2
No Yes Xanthomonas oryzae pv. oryzae PXO99A   2 2
No Yes Xanthomonas campestris pv. campestris str. B100   10 9
No Yes Spiribacter sp. UAH-SP71   1 1
No Yes Alkalilimnicola ehrlichii MLHE-1   2 2
No Yes Halorhodospira halophila SL1   1 1
No Yes Allochromatium vinosum DSM 180   3 3
No Yes Thiocystis violascens DSM 198   3 3
No Yes Nitrosococcus watsonii C-113   3 1
No Yes Nitrosococcus halophilus Nc4   1 1
No Yes Nitrosococcus oceani ATCC 19707   1 1
No Yes Coxiella burnetii Dugway 5J108-111   1 1
No Yes gamma proteobacterium HdN1   3 3
No Yes Candidatus Vesicomyosocius okutanii HA   1 1
No Yes Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)   1 1
No Yes Escherichia blattae DSM 4481   1 1
No Yes Cronobacter turicensis z3032   2 2
No Yes Cronobacter sakazakii ES15   3 3
No Yes Dickeya zeae Ech1591   5 5
No Yes Dickeya dadantii Ech703   2 2
No Yes secondary endosymbiont of Ctenarytaina eucalypti   1 1
No Yes Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)   3 3
No Yes Enterobacteriaceae bacterium strain FGI 57   2 2
No Yes Pectobacterium sp. SCC3193   2 2
No Yes Pectobacterium wasabiae WPP163   3 3
No Yes Pectobacterium atrosepticum SCRI1043   2 2
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   3 3
No Yes Sodalis glossinidius str. 'morsitans'   2 2
No Yes Pantoea sp. At-9b   2 2
No Yes Pantoea vagans C9-1   3 3
No Yes Pantoea ananatis LMG 20103   4 4
No Yes Rahnella sp. Y9602   3 3
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   3 3
No Yes Photorhabdus asymbiotica   3 3
No Yes Photorhabdus luminescens subsp. laumondii TTO1   1 1
No Yes Edwardsiella ictaluri 93-146   4 4
No Yes Edwardsiella tarda EIB202   3 3
No Yes Yersinia pseudotuberculosis IP 31758   3 3
No Yes Yersinia pestis Pestoides F   3 3
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   2 2
No Yes Xenorhabdus bovienii SS-2004   2 2
No Yes Xenorhabdus nematophila ATCC 19061   3 3
No Yes Shigella sonnei Ss046   3 3
No Yes Shigella flexneri 5 str. 8401   2 2
No Yes Shigella dysenteriae Sd197   3 3
No Yes Shigella boydii CDC 3083-94   2 2
No Yes Serratia sp. AS12   3 3
No Yes Serratia sp. ATCC 39006   2 2
No Yes Serratia plymuthica AS9   3 3
No Yes Serratia proteamaculans 568   3 3
No Yes Salmonella bongori NCTC 12419   2 2
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   2 2
No Yes Providencia stuartii MRSN 2154   4 4
No Yes Proteus mirabilis HI4320   3 3
No Yes Klebsiella variicola At-22   2 2
No Yes Klebsiella pneumoniae NTUH-K2044   2 2
No Yes Klebsiella oxytoca E718   2 2
No Yes Escherichia fergusonii ATCC 35469   2 2
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   3 3
No Yes Erwinia tasmaniensis Et1/99   3 3
No Yes Erwinia sp. Ejp617   3 3
No Yes Erwinia billingiae Eb661   2 2
No Yes Erwinia pyrifoliae Ep1/96   4 4
No Yes Erwinia amylovora ATCC 49946   3 3
No Yes Enterobacter sp. R4-368   4 4
No Yes Enterobacter sp. 638   3 3
No Yes Enterobacter asburiae LF7a   4 4
No Yes Enterobacter cloacae subsp. dissolvens SDM   3 3
No Yes Enterobacter aerogenes KCTC 2190   2 2
No Yes Citrobacter rodentium ICC168   3 3
No Yes Citrobacter koseri ATCC BAA-895   3 3
No Yes Azotobacter vinelandii DJ   5 5
No Yes Pseudomonas sp. TKP   4 4
No Yes Pseudomonas sp. UW4   4 4
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   4 4
No Yes Pseudomonas entomophila L48   2 2
No Yes Pseudomonas syringae pv. tomato str. DC3000   3 3
No Yes Pseudomonas stutzeri A1501   3 3
No Yes Pseudomonas fulva 12-X   5 5
No Yes Pseudomonas putida F1   2 2
No Yes Pseudomonas protegens Pf-5   3 3
No Yes Pseudomonas fluorescens SBW25   5 5
No Yes Pseudomonas mendocina ymp   2 2
No Yes Pseudomonas aeruginosa UCBPP-PA14   4 4
No Yes Pseudomonas sp. VLB120   3 3
No Yes Cellvibrio japonicus Ueda107   4 4
No Yes Psychrobacter sp. G   5 5
No Yes Psychrobacter sp. PRwf-1   7 7
No Yes Psychrobacter arcticus 273-4   3 3
No Yes Psychrobacter cryohalolentis K5   5 5
No Yes Moraxella catarrhalis RH4   3 3
No Yes Acinetobacter oleivorans DR1   2 2
No Yes Acinetobacter calcoaceticus PHEA-2   2 2
No Yes Acinetobacter baumannii ATCC 17978   2 2
No Yes Acinetobacter sp. ADP1   2 2
No Yes Thioalkalimicrobium cyclicum ALM1   1 1
No Yes Cycloclasticus sp. P1   1 1
No Yes Thiomicrospira crunogena XCL-2   1 1
No Yes Geitlerinema sp. PCC 7407   15 11
No Yes Leptolyngbya sp. PCC 7376   15 8
No Yes Microcoleus sp. PCC 7113   35 18
No Yes Trichodesmium erythraeum IMS101   12 7
No Yes Pseudanabaena sp. PCC 7367   20 7
No Yes cyanobacterium UCYN-A   1 1
No Yes Acaryochloris marina MBIC11017   1 1
No Yes Thermosynechococcus sp. NK55   1 1
No Yes Thermosynechococcus elongatus BP-1   1 1
No Yes Gloeocapsa sp. PCC 7428   4 3
No Yes Halothece sp. PCC 7418   2 2
No Yes Cyanothece sp. PCC 8802   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Synechococcus sp. PCC 6312   3 2
No Yes Synechococcus elongatus PCC 7942   1 1
No Yes Microcystis aeruginosa NIES-843   5 5
No Yes Gloeobacter violaceus PCC 7421   1 1
No Yes Rivularia sp. PCC 7116   50 28
No Yes Calothrix sp. PCC 7507   20 11
No Yes 'Nostoc azollae' 0708   11 8
No Yes Nostoc sp. PCC 7107   26 13
No Yes Nostoc punctiforme PCC 73102   26 16
No Yes Nostoc sp. PCC 7120   29 16
No Yes Nostoc sp. PCC 7524   26 14
No Yes Anabaena sp. 90   15 10
No Yes Anabaena variabilis ATCC 29413   27 14
No Yes Methanosarcina acetivorans C2A   1 1
No Yes Methanosarcina mazei Go1   1 1
No Yes Methanosarcina barkeri str. Fusaro   3 2
No Yes Methanoplanus petrolearius DSM 11571   1 1
No Yes Halorhabdus utahensis DSM 12940   1 1
No Yes Complete genome sequence of Methanobacterium sp. Mb1   2 2
No Yes Pyrobaculum calidifontis JCM 11548   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Western clawed frog 48 48
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 10 10
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 5 5
No Yes Ascaris suum Victoria/Ghent Pig roundworm 5 5
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 4 4
No Yes Batrachochytrium dendrobatidis JEL423   1 1
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 13 13
No Yes Hordeum vulgare 22 Domesticated barley 7 7
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 5 5
No Yes Brachyspira pilosicoli WesB   1 1
No Yes Brachyspira pilosicoli B2904   1 1
No Yes Brachyspira pilosicoli P43/6/78   1 1
No Yes Singulisphaera acidiphila DSM 18658   2 2
No Yes Gardnerella vaginalis HMP9231   1 1
No Yes Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222   1 1
No Yes Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222   1 1
No Yes Bifidobacterium longum subsp. longum F8   1 1
No Yes Bifidobacterium longum subsp. longum JCM 1217   1 1
No Yes Bifidobacterium thermophilum RBL67   1 1
No Yes Bifidobacterium bifidum PRL2010   1 1
No Yes Bifidobacterium bifidum BGN4   1 1
No Yes Frankia sp. EuI1c   10 8
No Yes Frankia sp. CcI3   5 4
No Yes Nocardiopsis alba ATCC BAA-2165   8 5
No Yes Streptomyces rapamycinicus NRRL 5491   6 6
No Yes Streptomyces davawensis JCM 4913   19 17
No Yes Streptomyces fulvissimus DSM 40593   13 10
No Yes Streptomyces venezuelae ATCC 10712   16 14
No Yes Streptomyces collinus Tu 365   8 7
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   2 2
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   16 11
No Yes Streptomyces albus J1074   12 10
No Yes Saccharothrix espanaensis DSM 44229   6 5
No Yes Amycolatopsis mediterranei RB   13 11
No Yes Amycolatopsis mediterranei S699   13 11
No Yes Amycolatopsis mediterranei S699   13 11
No Yes Amycolatopsis orientalis HCCB10007   16 10
No Yes Propionibacterium avidum 44067   2 2
No Yes Propionibacterium acnes C1   1 1
No Yes Propionibacterium acnes HL096PA1   1 1
No Yes Propionibacterium acnes TypeIA2 P.acn31   1 1
No Yes Propionibacterium acnes TypeIA2 P.acn17   1 1
No Yes Propionibacterium acnes TypeIA2 P.acn33   1 1
No Yes Propionibacterium acnes ATCC 11828   1 1
No Yes Propionibacterium acnes 6609   2 2
No Yes Propionibacterium acnes 266   1 1
No Yes Propionibacterium acnes KPA171202   2 2
No Yes Actinoplanes friuliensis DSM 7358   10 9
No Yes Rhodococcus pyridinivorans SB3094   2 1
No Yes Rhodococcus erythropolis CCM2595   2 1
No Yes Nocardia brasiliensis ATCC 700358   2 1
No Yes Mycobacterium sp. MOTT36Y   2 1
No Yes Mycobacterium sp. JDM601   2 1
No Yes Mycobacterium abscessus subsp. bolletii 50594   3 2
No Yes Mycobacterium liflandii 128FXT   2 1
No Yes Mycobacterium sp. KMS   3 2
No Yes Mycobacterium sp. MCS   3 2
No Yes Mycobacterium yongonense 05-1390   2 1
No Yes Mycobacterium intracellulare MOTT-64   2 1
No Yes Mycobacterium intracellulare MOTT-02   2 1
No Yes Mycobacterium avium subsp. paratuberculosis MAP4   2 1
No Yes Mycobacterium avium subsp. paratuberculosis K-10   2 1
No Yes Mycobacterium canettii CIPT 140070017   2 1
No Yes Mycobacterium canettii CIPT 140060008   2 1
No Yes Mycobacterium canettii CIPT 140070008   2 1
No Yes Mycobacterium canettii CIPT 140070010   2 1
No Yes Mycobacterium tuberculosis EAI5/NITR206   2 1
No Yes Mycobacterium tuberculosis EAI5   2 1
No Yes Mycobacterium tuberculosis CAS/NITR204   2 1
No Yes Mycobacterium tuberculosis str. Beijing/NITR203   2 1
No Yes Mycobacterium tuberculosis UT205   2 1
No Yes Mycobacterium tuberculosis RGTB423   2 1
No Yes Mycobacterium tuberculosis RGTB327   2 1
No Yes Mycobacterium tuberculosis CTRI-2   2 1
No Yes Mycobacterium tuberculosis str. Erdman = ATCC 35801   2 1
No Yes Mycobacterium tuberculosis KZN 605   2 1
No Yes Mycobacterium tuberculosis KZN 4207   2 1
No Yes Mycobacterium tuberculosis CCDC5180   2 1
No Yes Mycobacterium tuberculosis CCDC5079   2 1
No Yes Mycobacterium tuberculosis CCDC5079   2 1
No Yes Mycobacterium tuberculosis H37Ra   2 1
No Yes Mycobacterium tuberculosis str. Haarlem   2 1
No Yes Mycobacterium tuberculosis F11   2 1
No Yes Mycobacterium tuberculosis H37Rv   2 1
No Yes Mycobacterium tuberculosis CDC1551   2 1
No Yes Mycobacterium bovis AF2122/97   2 1
No Yes Mycobacterium bovis BCG str. Korea 1168P   2 1
No Yes Mycobacterium bovis BCG str. Mexico   2 1
No Yes Mycobacterium bovis BCG str. Tokyo 172   2 1
No Yes Mycobacterium gilvum Spyr1   3 2
No Yes Mycobacterium smegmatis JS623   4 3
No Yes Mycobacterium smegmatis str. MC2 155   3 2
No Yes Mycobacterium leprae TN   2 1
No Yes Mycobacterium kansasii ATCC 12478   6 2
No Yes Corynebacterium maris DSM 45190   2 1
No Yes Corynebacterium halotolerans YIM 70093 = DSM 44683   2 1
No Yes Corynebacterium terpenotabidum Y-11   2 1
No Yes Corynebacterium ulcerans BR-AD22   2 1
No Yes Corynebacterium ulcerans 809   2 1
No Yes Corynebacterium urealyticum DSM 7111   2 1
No Yes Corynebacterium argentoratense DSM 44202   2 1
No Yes Corynebacterium callunae DSM 20147   2 1
No Yes Corynebacterium pseudotuberculosis 258   2 1
No Yes Corynebacterium pseudotuberculosis Cp162   2 1
No Yes Corynebacterium pseudotuberculosis P54B96   2 1
No Yes Corynebacterium pseudotuberculosis 267   2 1
No Yes Corynebacterium pseudotuberculosis 1/06-A   2 1
No Yes Corynebacterium pseudotuberculosis 42/02-A   2 1
No Yes Corynebacterium pseudotuberculosis 3/99-5   2 1
No Yes Corynebacterium pseudotuberculosis 31   2 1
No Yes Corynebacterium pseudotuberculosis CIP 52.97   2 1
No Yes Corynebacterium pseudotuberculosis PAT10   2 1
No Yes Corynebacterium pseudotuberculosis I19   2 1
No Yes Corynebacterium pseudotuberculosis FRC41   2 1
No Yes Corynebacterium pseudotuberculosis C231   2 1
No Yes Corynebacterium pseudotuberculosis 1002   2 1
No Yes Corynebacterium glutamicum MB001   2 1
No Yes Corynebacterium glutamicum SCgG2   2 1
No Yes Corynebacterium glutamicum SCgG1   2 1
No Yes Corynebacterium glutamicum ATCC 13032   2 1
No Yes Corynebacterium glutamicum ATCC 13032   2 1
No Yes Corynebacterium glutamicum ATCC 13032   2 1
No Yes Corynebacterium diphtheriae BH8   2 1
No Yes Corynebacterium diphtheriae INCA 402   2 1
No Yes Corynebacterium diphtheriae VA01   2 1
No Yes Corynebacterium diphtheriae HC04   2 1
No Yes Corynebacterium diphtheriae HC03   2 1
No Yes Corynebacterium diphtheriae HC02   2 1
No Yes Corynebacterium diphtheriae HC01   2 1
No Yes Corynebacterium diphtheriae 241   2 1
No Yes Corynebacterium diphtheriae CDCE 8392   2 1
No Yes Corynebacterium diphtheriae PW8   2 1
No Yes Corynebacterium diphtheriae C7 (beta)   2 1
No Yes Corynebacterium diphtheriae 31A   2 1
No Yes Leifsonia xyli subsp. cynodontis DSM 46306   2 2
No Yes Clavibacter michiganensis subsp. sepedonicus   1 1
No Yes Clavibacter michiganensis subsp. nebraskensis NCPPB 2581   1 1
No Yes Actinomyces graevenitzii C83   3 3
No Yes Actinomyces odontolyticus ATCC 17982   2 2
No Yes Actinomyces viscosus C505   1 1
No Yes Gordonibacter pamelaeae 7-10-1-b   2 1
No Yes Adlercreutzia equolifaciens DSM 19450   2 1
No Yes Chlorobium phaeobacteroides BS1   1 1
No Yes Echinicola vietnamensis DSM 17526   4 4
No Yes Emticicia oligotrophica DSM 17448   1 1
No Yes Bacteroides fragilis 638R   1 1
No Yes Bacteroides fragilis NCTC 9343   1 1
No Yes Nonlabens dokdonensis DSW-6   3 3
No Yes Psychroflexus torquis ATCC 700755   1 1
No Yes Riemerella anatipestifer RA-CH-2   1 1
No Yes Riemerella anatipestifer RA-CH-1   1 1
No Yes Riemerella anatipestifer RA-GD   1 1
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   1 1
No Yes Leptospirillum ferriphilum ML-04   1 1
No Yes Fusobacterium nucleatum subsp. vincentii 3_1_36A2   1 1
No Yes Fusobacterium nucleatum subsp. animalis 4_8   1 1
No Yes Deinococcus peraridilitoris DSM 19664   8 5
No Yes Thermus oshimai JL-2   1 1
No Yes [Eubacterium] cylindroides [Eubacterium] cylindroides T2-87   1 1
No Yes Erysipelothrix rhusiopathiae SY1027   1 1
No Yes Eubacterium siraeum V10Sc8a   1 1
No Yes Clostridium thermocellum DSM 1313   9 7
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532   4 4
No Yes Faecalibacterium prausnitzii L2-6   9 3
No Yes Ruminococcus champanellensis 18P13   6 3
No Yes Sulfobacillus acidophilus TPY   16 9
No Yes Clostridium acidurici 9a   2 2
No Yes Desulfosporosinus meridiei DSM 13257   8 6
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   7 4
No Yes Desulfitobacterium hafniense DCB-2   7 4
No Yes Desulfotomaculum gibsoniae DSM 7213   5 4
No Yes Clostridium difficile BI1   3 3
No Yes Clostridium difficile R20291   2 2
No Yes Clostridium difficile CD196   2 2
No Yes Clostridium saccharolyticum Clostridium cf. saccharolyticum K10   1 1
No Yes Coprococcus catus GD/7   5 4
No Yes Roseburia intestinalis XB6B4   2 2
No Yes Candidatus Arthromitus sp. SFB-rat-Yit   4 2
No Yes Candidatus Arthromitus sp. SFB-mouse-Yit   4 2
No Yes Clostridium sp. SY8519   3 2
No Yes Clostridium saccharobutylicum DSM 13864   5 4
No Yes Clostridium autoethanogenum DSM 10061   6 6
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   6 6
No Yes Clostridium kluyveri NBRC 12016   6 6
No Yes Clostridium tetani genome 12124569   5 5
No Yes Clostridium perfringens SM101   1 1
No Yes Clostridium perfringens str. 13   1 1
No Yes Clostridium pasteurianum BC1   16 12
No Yes Clostridium botulinum H04402 065   6 6
No Yes Clostridium botulinum BKT015925   5 5
No Yes Clostridium botulinum F str. 230613   6 6
No Yes Clostridium botulinum F str. Langeland   5 5
No Yes Clostridium botulinum E3 str. Alaska E43   5 2
No Yes Clostridium botulinum B1 str. Okra   4 4
No Yes Clostridium botulinum Ba4 str. 657   8 7
No Yes Clostridium botulinum A2 str. Kyoto   7 6
No Yes Clostridium botulinum A3 str. Loch Maree   5 5
No Yes Clostridium botulinum A str. Hall   6 6
No Yes Clostridium botulinum A str. ATCC 19397   6 6
No Yes Clostridium acetobutylicum DSM 1731   19 13
No Yes Clostridium acetobutylicum EA 2018   19 13
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   9 9
No Yes Thermoanaerobacterium thermosaccharolyticum M0795   5 5
No Yes Thermoanaerobacter sp. X513   9 6
No Yes Halobacteroides halobius DSM 5150   3 2
No Yes Carnobacterium maltaromaticum LMA28   1 1
No Yes Melissococcus plutonius ATCC 35311   2 1
No Yes Enterococcus casseliflavus EC20   1 1
No Yes Enterococcus faecium Aus0085   1 1
No Yes Enterococcus faecalis str. Symbioflor 1   1 1
No Yes Enterococcus faecalis D32   1 1
No Yes Enterococcus faecalis OG1RF   1 1
No Yes Enterococcus faecalis V583   1 1
No Yes Lactobacillus paracasei subsp. paracasei 8700:2   3 2
No Yes Lactobacillus casei LOCK919   3 2
No Yes Lactobacillus casei W56   3 2
No Yes Lactobacillus casei LC2W   3 2
No Yes Lactobacillus casei BD-II   3 2
No Yes Lactobacillus casei BL23   3 2
No Yes Lactobacillus casei str. Zhang   3 2
No Yes Lactobacillus rhamnosus LOCK908   3 3
No Yes Lactobacillus rhamnosus LOCK900   2 2
No Yes Lactobacillus rhamnosus ATCC 8530   3 3
No Yes Lactobacillus rhamnosus GG   1 1
No Yes Lactobacillus rhamnosus GG   1 1
No Yes Lactobacillus johnsonii N6.2   1 1
No Yes Lactobacillus johnsonii DPC 6026   1 1
No Yes Lactobacillus johnsonii NCC 533   1 1
No Yes Lactobacillus reuteri TD1   1 1
No Yes Lactobacillus reuteri SD2112   1 1
No Yes Lactobacillus plantarum 16   3 3
No Yes Lactobacillus plantarum ZJ316   2 2
No Yes Lactobacillus plantarum subsp. plantarum ST-III   2 2
No Yes Lactobacillus plantarum subsp. plantarum P-8   2 2
No Yes Lactobacillus plantarum WCFS1   1 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus ND02   2 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus 2038   1 1
No Yes Lactobacillus brevis KB290   2 2
No Yes Pediococcus pentosaceus SL4   1 1
No Yes Exiguobacterium antarcticum B7   3 3
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1   6 5
No Yes Thermobacillus composti KWC4   4 4
No Yes Paenibacillus sp. Y412MC10   4 4
No Yes Paenibacillus mucilaginosus KNP414   8 7
No Yes Paenibacillus mucilaginosus K02   10 8
No Yes Paenibacillus larvae subsp. larvae DSM 25430   8 6
No Yes Paenibacillus polymyxa CR1   3 3
No Yes Paenibacillus polymyxa SC2   3 3
No Yes Paenibacillus polymyxa E681   4 4
No Yes Listeria monocytogenes EGD sequence   1 1
No Yes Listeria monocytogenes N53-1   1 1
No Yes Listeria monocytogenes La111   1 1
No Yes Listeria monocytogenes serotype 4b str. LL195   1 1
No Yes Listeria monocytogenes 07PF0776   1 1
No Yes Listeria monocytogenes M7   1 1
No Yes Listeria monocytogenes J1-220   1 1
No Yes Listeria monocytogenes J1816   1 1
No Yes Listeria monocytogenes SLCC2376   1 1
No Yes Listeria monocytogenes SLCC5850   1 1
No Yes Listeria monocytogenes ATCC 19117   1 1
No Yes Listeria monocytogenes L312   1 1
No Yes Listeria monocytogenes SLCC2479   1 1
No Yes Listeria monocytogenes SLCC7179   1 1
No Yes Listeria monocytogenes SLCC2540   1 1
No Yes Listeria monocytogenes SLCC2378   1 1
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755   1 1
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372   1 1
No Yes Listeria monocytogenes serotype 7 str. SLCC2482   1 1
No Yes Listeria monocytogenes 08-5578   1 1
No Yes Listeria monocytogenes 08-5923   1 1
No Yes Listeria monocytogenes L99   1 1
No Yes Listeria monocytogenes HCC23   1 1
No Yes Listeria monocytogenes 10403S   1 1
No Yes Listeria monocytogenes J0161   1 1
No Yes Listeria monocytogenes Finland 1998   1 1
No Yes Listeria monocytogenes FSL R2-561   1 1
No Yes Listeria monocytogenes serotype 4b str. F2365   1 1
No Yes Listeria monocytogenes EGD-e   1 1
No Yes Geobacillus sp. C56-T3   7 4
No Yes Geobacillus sp. Y4.1MC1   6 3
No Yes Geobacillus sp. Y412MC52   7 4
No Yes Geobacillus sp. Y412MC61   7 4
No Yes Amphibacillus xylanus NBRC 15112   4 3
No Yes Bacillus subtilis PY79   11 9
No Yes Bacillus subtilis XF-1   5 5
No Yes Bacillus subtilis QB928   9 7
No Yes Bacillus subtilis BSn5   9 9
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   7 7
No Yes Bacillus subtilis subsp. subtilis str. BSP1   11 9
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   9 8
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   9 8
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   10 9
No Yes Bacillus subtilis subsp. spizizenii str. W23   8 8
No Yes Bacillus subtilis subsp. natto BEST195   9 8
No Yes Bacillus licheniformis 9945A   8 6
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   7 5
No Yes Bacillus amyloliquefaciens LFB112   7 6
No Yes Bacillus amyloliquefaciens CC178   9 7
No Yes Bacillus amyloliquefaciens Y2   8 7
No Yes Bacillus amyloliquefaciens IT-45   10 8
No Yes Bacillus amyloliquefaciens DSM 7   9 8
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   10 8
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   10 8
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   8 7
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   8 7
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5113   7 6
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   7 6
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   9 8
No Yes Bacillus amyloliquefaciens XH7   9 8
No Yes Bacillus amyloliquefaciens LL3   10 9
No Yes Bacillus amyloliquefaciens TA208   9 8
No Yes Bacillus infantis NRRL B-14911   3 3
No Yes Bacillus cereus subsp. cytotoxis NVH 391-98   2 2
No Yes Bacillus toyonensis BCT-7112   2 2
No Yes Bacillus thuringiensis HD-771   3 3
No Yes Bacillus thuringiensis HD-789   2 2
No Yes Bacillus thuringiensis MC28   2 2
No Yes Bacillus thuringiensis serovar chinensis CT-43   2 2
No Yes Bacillus thuringiensis YBT-1518   2 2
No Yes Bacillus thuringiensis Bt407   2 2
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   2 2
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   2 2
No Yes Bacillus thuringiensis BMB171   2 2
No Yes Bacillus thuringiensis serovar finitimus YBT-020   2 2
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   6 4
No Yes Bacillus cereus FRI-35   2 2
No Yes Bacillus cereus biovar anthracis str. CI   2 2
No Yes Bacillus cereus AH820   2 2
No Yes Bacillus cereus AH187   2 2
No Yes Bacillus cereus B4264   2 2
No Yes Bacillus cereus G9842   3 3
No Yes Bacillus cereus Q1   2 2
No Yes Bacillus cereus F837/76   2 2
No Yes Bacillus cereus NC7401   2 2
No Yes Bacillus cereus E33L   2 2
No Yes Bacillus cereus ATCC 14579   2 2
No Yes Bacillus cereus ATCC 10987   2 2
No Yes Bacillus anthracis str. H9401   2 2
No Yes Bacillus anthracis str. CDC 684   2 2
No Yes Bacillus anthracis str. 'Ames Ancestor'   2 2
No Yes Bacillus anthracis str. Sterne   2 2
No Yes Bacillus anthracis str. Ames   2 2
No Yes Bacillus megaterium WSH-002   17 13
No Yes Bacillus megaterium QM B1551   16 12
No Yes Bacillus coagulans 36D1   3 3
No Yes Staphylococcus pseudintermedius ED99   1 1
No Yes Staphylococcus pasteuri SP1   1 1
No Yes Staphylococcus lugdunensis N920143   1 1
No Yes Staphylococcus warneri SG1   1 1
No Yes Staphylococcus epidermidis ATCC 12228   1 1
No Yes Staphylococcus aureus CA-347   1 1
No Yes Staphylococcus aureus Bmb9393   1 1
No Yes Staphylococcus aureus M1   1 1
No Yes Staphylococcus aureus 08BA02176   1 1
No Yes Staphylococcus aureus ST228/18412   1 1
No Yes Staphylococcus aureus ST228/18341   1 1
No Yes Staphylococcus aureus ST228/16125   1 1
No Yes Staphylococcus aureus ST228/16035   1 1
No Yes Staphylococcus aureus ST228/15532   1 1
No Yes Staphylococcus aureus ST228/10497   1 1
No Yes Staphylococcus aureus ST228/10388   1 1
No Yes Staphylococcus aureus 04-02981   1 1
No Yes Staphylococcus aureus RF122   1 1
No Yes Staphylococcus aureus subsp. aureus Z172   1 1
No Yes Staphylococcus aureus subsp. aureus 6850   1 1
No Yes Staphylococcus aureus subsp. aureus SA957   1 1
No Yes Staphylococcus aureus subsp. aureus CN1   1 1
No Yes Staphylococcus aureus subsp. aureus SA40   1 1
No Yes Staphylococcus aureus subsp. aureus 11819-97   1 1
No Yes Staphylococcus aureus subsp. aureus M013   1 1
No Yes Staphylococcus aureus subsp. aureus HO 5096 0412   1 1
No Yes Staphylococcus aureus subsp. aureus VC40   1 1
No Yes Staphylococcus aureus subsp. aureus T0131   1 1
No Yes Staphylococcus aureus subsp. aureus LGA251   1 1
No Yes Staphylococcus aureus subsp. aureus MSHR1132   1 1
No Yes Staphylococcus aureus subsp. aureus ECT-R 2   1 1
No Yes Staphylococcus aureus subsp. aureus JKD6159   1 1
No Yes Staphylococcus aureus subsp. aureus ED133   1 1
No Yes Staphylococcus aureus subsp. aureus ED98   1 1
No Yes Staphylococcus aureus subsp. aureus TW20   1 1
No Yes Staphylococcus aureus subsp. aureus 55/2053   1 1
No Yes Staphylococcus aureus subsp. aureus TCH60   1 1
No Yes Staphylococcus aureus subsp. aureus str. JKD6008   1 1
No Yes Staphylococcus aureus subsp. aureus 71193   1 1
No Yes Staphylococcus aureus subsp. aureus S0385   1 1
No Yes Staphylococcus aureus subsp. aureus str. Newman   1 1
No Yes Staphylococcus aureus subsp. aureus Mu3   1 1
No Yes Staphylococcus aureus subsp. aureus USA300_TCH1516   1 1
No Yes Staphylococcus aureus subsp. aureus USA300_FPR3757   1 1
No Yes Staphylococcus aureus subsp. aureus JH9   1 1
No Yes Staphylococcus aureus subsp. aureus MSSA476   1 1
No Yes Staphylococcus aureus subsp. aureus MRSA252   1 1
No Yes Staphylococcus aureus subsp. aureus MW2   1 1
No Yes Staphylococcus aureus subsp. aureus N315   1 1
No Yes Staphylococcus aureus subsp. aureus Mu50   1 1
No Yes Staphylococcus aureus subsp. aureus COL   1 1
No Yes Staphylococcus aureus subsp. aureus NCTC 8325   1 1
No Yes Bdellovibrio bacteriovorus str. Tiberius   4 4
No Yes Desulfocapsa sulfexigens DSM 10523   4 4
No Yes Desulfovibrio gigas DSM 1382 = ATCC 19364   2 2
No Yes Desulfovibrio desulfuricans ND132   2 2
No Yes Geobacter sp. M18   1 1
No Yes Geobacter sulfurreducens PCA   1 1
No Yes Sorangium cellulosum So0157-2   8 8
No Yes Anaeromyxobacter sp. K   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-C   2 2
No Yes Myxococcus stipitatus DSM 14675   6 6
No Yes Sulfuricella denitrificans skB26   3 3
No Yes Ralstonia solanacearum FQY_4   3 3
No Yes Ralstonia solanacearum Po82   2 2
No Yes Ralstonia solanacearum PSI07   2 2
No Yes Ralstonia solanacearum CMR15   1 1
No Yes Ralstonia solanacearum GMI1000   3 3
No Yes Burkholderia sp. YI23   3 3
No Yes Burkholderia sp. CCGE1001   1 1
No Yes Burkholderia sp. KJ006   1 1
No Yes Burkholderia thailandensis MSMB121   4 4
No Yes Burkholderia pseudomallei MSHR305   3 3
No Yes Burkholderia pseudomallei NCTC 13179   4 4
No Yes Burkholderia pseudomallei BPC006   3 3
No Yes Burkholderia pseudomallei 1026b   5 5
No Yes Burkholderia pseudomallei MSHR346   1 1
No Yes Burkholderia pseudomallei 668   3 3
No Yes Burkholderia pseudomallei 1710b   3 3
No Yes Burkholderia pseudomallei K96243   5 5
No Yes Burkholderia mallei NCTC 10229   3 3
No Yes Burkholderia mallei NCTC 10247   3 3
No Yes Burkholderia mallei ATCC 23344   3 3
No Yes Burkholderia lata   1 1
No Yes Burkholderia ambifaria MC40-6   1 1
No Yes Burkholderia cenocepacia MC0-3   2 2
No Yes Burkholderia cenocepacia AU 1054   1 1
No Yes Burkholderia cenocepacia J2315   2 2
No Yes Burkholderia multivorans ATCC 17616   2 2
No Yes Burkholderia cepacia GG4   1 1
No Yes Alicycliphilus denitrificans BC   6 5
No Yes Variovorax paradoxus B4   2 2
No Yes Variovorax paradoxus EPS   1 1
No Yes Taylorella asinigenitalis 14/45   2 2
No Yes Taylorella equigenitalis 14/56   3 3
No Yes Taylorella equigenitalis ATCC 35865   4 4
No Yes Bordetella pertussis CS   2 2
No Yes Bordetella parapertussis 18323   2 2
No Yes Bordetella parapertussis Bpp5   3 3
No Yes Bordetella bronchiseptica MO149   3 3
No Yes Bordetella bronchiseptica 253   3 3
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   3 3
No Yes Nitrosomonas sp. AL212   3 3
No Yes Caulobacter crescentus CB15   3 3
No Yes Zymomonas mobilis subsp. mobilis ATCC 29191   1 1
No Yes Zymomonas mobilis subsp. mobilis CP4   1 1
No Yes Zymomonas mobilis subsp. mobilis ATCC 10988   1 1
No Yes Zymomonas mobilis subsp. mobilis ZM4   1 1
No Yes Zymomonas mobilis subsp. pomaceae ATCC 29192   1 1
No Yes Phaeobacter gallaeciensis DSM 17395   8 8
No Yes Phaeobacter gallaeciensis DSM 26640   9 9
No Yes Leisingera methylohalidivorans DSM 14336   8 8
No Yes Octadecabacter antarcticus 307   8 7
No Yes Octadecabacter arcticus 238   5 5
No Yes Rhodobacter sphaeroides KD131   9 9
No Yes Rhodobacter sphaeroides ATCC 17025   8 8
No Yes Rhodobacter sphaeroides 2.4.1   11 11
No Yes Paracoccus aminophilus JCM 7686   5 5
No Yes Magnetospirillum gryphiswaldense MSR-1 v2   2 2
No Yes Rhodospirillum rubrum ATCC 11170   4 4
No Yes Micavibrio aeruginosavorus EPB   7 7
No Yes Candidatus Pelagibacter ubique HTCC1062   1 1
No Yes Rickettsia canadensis str. CA410   2 2
No Yes Rickettsia slovaca str. D-CWPP   2 2
No Yes Rickettsia massiliae str. AZT80   2 2
No Yes Rickettsia rickettsii str. Arizona   2 2
No Yes Rickettsia rickettsii str. Brazil   2 2
No Yes Rickettsia rickettsii str. Hauke   2 2
No Yes Rickettsia rickettsii str. Colombia   2 2
No Yes Rickettsia rickettsii str. Hlp#2   2 2
No Yes Rickettsia rickettsii str. Hino   2 2
No Yes Rickettsia rickettsii str. Iowa   2 2
No Yes Methylobacterium extorquens DM4   13 13
No Yes Methylobacterium extorquens PA1   11 11
No Yes Brucella ceti TE10759-12   8 7
No Yes Brucella ceti TE28753-12   4 3
No Yes Brucella canis HSK A52141   8 7
No Yes Brucella suis VBI22   7 6
No Yes Brucella suis 1330   7 6
No Yes Brucella suis 1330   7 6
No Yes Brucella melitensis NI   8 7
No Yes Brucella melitensis M5-90   8 7
No Yes Brucella melitensis M28   8 7
No Yes Brucella melitensis bv. 1 str. 16M   8 7
No Yes Brucella abortus A13334   8 7
No Yes Brucella melitensis biovar Abortus 2308   8 7
No Yes Brucella abortus bv. 1 str. 9-941   8 7
No Yes Sinorhizobium fredii USDA 257   12 11
No Yes Sinorhizobium fredii HH103   12 11
No Yes Sinorhizobium meliloti 2011   14 13
No Yes Sinorhizobium meliloti GR4   13 12
No Yes Sinorhizobium meliloti Rm41   13 12
No Yes Sinorhizobium meliloti SM11   12 11
No Yes Sinorhizobium meliloti BL225C   12 11
No Yes Sinorhizobium meliloti 1021   14 13
No Yes Rhizobium etli CFN 42   12 11
No Yes Rhizobium etli bv. mimosae str. Mim1   13 12
No Yes Rhizobium tropici CIAT 899   12 11
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   11 10
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   14 12
No Yes Liberibacter crescens BT-1   4 4
No Yes Candidatus Liberibacter solanacearum CLso-ZC1   1 1
No Yes Candidatus Liberibacter americanus str. Sao Paulo   2 2
No Yes Candidatus Liberibacter asiaticus str. gxpsy   1 1
No Yes Mesorhizobium australicum WSM2073   9 8
No Yes Hyphomicrobium nitrativorans NL23   9 8
No Yes Hyphomicrobium denitrificans 1NES1   9 8
No Yes Oligotropha carboxidovorans OM5   7 7
No Yes Oligotropha carboxidovorans OM5   7 7
No Yes Rhodopseudomonas palustris DX-1   9 9
No Yes Rhodopseudomonas palustris TIE-1   10 10
No Yes Rhodopseudomonas palustris HaA2   10 10
No Yes Rhodopseudomonas palustris BisB5   9 9
No Yes Rhodopseudomonas palustris BisB18   10 10
No Yes Rhodopseudomonas palustris CGA009   9 9
No Yes Bradyrhizobium sp. S23321   13 13
No Yes Bradyrhizobium sp. BTAi1   13 13
No Yes Bradyrhizobium oligotrophicum S58   14 14
No Yes Bradyrhizobium japonicum USDA 6   13 13
No Yes Bartonella australis Aust/NH1   3 3
No Yes Bartonella vinsonii subsp. berkhoffii str. Winnie   4 3
No Yes Bartonella quintana RM-11   4 3
No Yes Aeromonas hydrophila ML09-119   3 3
No Yes Vibrio fischeri ES114   2 2
No Yes Vibrio sp. EJY3   3 3
No Yes Vibrio parahaemolyticus BB22OP   2 2
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   1 1
No Yes Vibrio anguillarum Listonella anguillarum M3   3 3
No Yes Vibrio nigripulchritudo VibrioScope   4 3
No Yes Vibrio vulnificus CMCP6   2 2
No Yes Vibrio vulnificus YJ016   2 2
No Yes Vibrio cholerae LMA3984-4   3 3
No Yes Vibrio cholerae M66-2   3 3
No Yes Vibrio cholerae O395   3 3
No Yes Vibrio cholerae IEC224   3 3
No Yes Vibrio cholerae O1 str. 2010EL-1786   3 3
No Yes Vibrio cholerae MJ-1236   3 3
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   3 3
No Yes Idiomarina loihiensis GSL 199   1 1
No Yes Shewanella sp. W3-18-1   3 3
No Yes Shewanella sp. ANA-3   4 4
No Yes Shewanella baltica BA175   3 3
No Yes Shewanella baltica OS678   4 4
No Yes Shewanella baltica OS117   2 2
No Yes Shewanella baltica OS223   3 3
No Yes Shewanella baltica OS195   4 4
No Yes Shewanella baltica OS155   3 3
No Yes Shewanella sp. MR-7   4 4
No Yes Shewanella putrefaciens 200   4 4
No Yes Glaciecola psychrophila 170   3 3
No Yes Alteromonas macleodii str. 'Ionian Sea UM4b'   2 2
No Yes Alteromonas macleodii str. 'Ionian Sea UM7'   2 2
No Yes Alteromonas macleodii str. 'Ionian Sea U8'   2 2
No Yes Alteromonas macleodii str. 'Ionian Sea U7'   2 2
No Yes Alteromonas macleodii str. 'Ionian Sea U4'   2 2
No Yes Alteromonas macleodii str. 'Aegean Sea MED64'   2 2
No Yes Alteromonas macleodii str. 'English Channel 615'   1 1
No Yes Alteromonas macleodii str. 'English Channel 673'   2 2
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   1 1
No Yes Alteromonas macleodii AltDE1   2 2
No Yes Alteromonas macleodii str. 'Black Sea 11'   3 3
No Yes Alteromonas macleodii ATCC 27126   2 2
No Yes Alcanivorax dieselolei B5   2 2
No Yes Thalassolituus oleivorans MIL-1   3 3
No Yes Stenotrophomonas maltophilia D457   8 6
No Yes Stenotrophomonas maltophilia JV3   7 5
No Yes Stenotrophomonas maltophilia R551-3   3 3
No Yes Xanthomonas citri subsp. citri Aw12879   6 6
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   7 6
No Yes Xanthomonas axonopodis pv. citrumelo F1   7 7
No Yes Xanthomonas axonopodis Xac29-1   7 7
No Yes Xanthomonas oryzae pv. oryzicola BLS256   3 3
No Yes Xanthomonas oryzae pv. oryzae MAFF 311018   2 2
No Yes Xanthomonas oryzae pv. oryzae KACC 10331   2 2
No Yes Xanthomonas campestris pv. raphani 756C   9 9
No Yes Xanthomonas campestris pv. campestris str. 8004   6 6
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   6 6
No Yes Spiribacter salinus M19-40   1 1
No Yes Thioalkalivibrio nitratireducens DSM 14787   7 4
No Yes Thioflavicoccus mobilis 8321   3 3
No Yes Coxiella burnetii CbuK_Q154   1 1
No Yes Coxiella burnetii CbuG_Q212   1 1
No Yes Coxiella burnetii RSA 331   1 1
No Yes Coxiella burnetii RSA 493   1 1
No Yes Simiduia agarivorans SA1 = DSM 21679   4 4
No Yes Cronobacter sakazakii CMCC 45402   5 5
No Yes Cronobacter sakazakii SP291   3 3
No Yes Cronobacter sakazakii ATCC BAA-894   3 3
No Yes Dickeya dadantii Ech586   4 4
No Yes Dickeya dadantii 3937   6 6
No Yes Raoultella ornithinolytica B6   2 2
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   3 3
No Yes Pantoea ananatis LMG 5342   3 3
No Yes Pantoea ananatis PA13   4 4
No Yes Pantoea ananatis AJ13355   4 4
No Yes Rahnella aquatilis HX2   3 3
No Yes Edwardsiella tarda C07-087   3 3
No Yes Edwardsiella tarda FL6-60   3 3
No Yes Yersinia pseudotuberculosis PB1/+   3 3
No Yes Yersinia pseudotuberculosis YPIII   3 3
No Yes Yersinia pseudotuberculosis IP 32953   3 3
No Yes Yersinia pestis biovar Microtus str. 91001   3 3
No Yes Yersinia pestis A1122   3 3
No Yes Yersinia pestis Z176003   3 3
No Yes Yersinia pestis D182038   3 3
No Yes Yersinia pestis D106004   3 3
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   3 3
No Yes Yersinia pestis Nepal516   3 3
No Yes Yersinia pestis Antiqua   3 3
No Yes Yersinia pestis Angola   3 3
No Yes Yersinia pestis CO92   3 3
No Yes Yersinia pestis KIM10+   3 3
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   3 3
No Yes Yersinia enterocolitica subsp. palearctica Y11   3 3
No Yes Shigella sonnei 53G   3 3
No Yes Shigella flexneri 2002017   4 4
No Yes Shigella flexneri 2a str. 2457T   2 2
No Yes Shigella flexneri 2a str. 301   4 4
No Yes Shigella dysenteriae 1617   3 3
No Yes Shigella boydii Sb227   2 2
No Yes Serratia sp. AS13   3 3
No Yes Serratia plymuthica S13   3 3
No Yes Serratia plymuthica 4Rx13   3 3
No Yes Serratia marcescens FGI94   3 3
No Yes Serratia marcescens WW4   4 4
No Yes Serratia liquefaciens ATCC 27592   3 3
No Yes Salmonella bongori N268-08   2 2
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   3 3
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   2 2
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   2 2
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   2 2
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   2 2
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   2 2
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   2 2
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   2 2
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   2 2
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   2 2
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   2 2
No Yes Salmonella enterica serovar Bovismorbificans genomics   2 2
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   2 2
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   2 2
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   2 2
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   2 2
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   2 2
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   2 2
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   2 2
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   2 2
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   2 2
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   2 2
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   2 2
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   1 1
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   2 2
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   2 2
No Yes Proteus mirabilis BB2000   2 2
No Yes Morganella morganii subsp. morganii KT   2 2
No Yes Klebsiella pneumoniae JM45   2 2
No Yes Klebsiella pneumoniae CG43   2 2
No Yes Klebsiella pneumoniae KCTC 2242   2 2
No Yes Klebsiella pneumoniae 342   4 4
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   2 2
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   2 2
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   2 2
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   1 1
No Yes Klebsiella oxytoca KCTC 1686   2 2
No Yes Escherichia coli E. coli PMV-1   3 3
No Yes Escherichia coli JJ1886   3 3
No Yes Escherichia coli LY180   2 2
No Yes Escherichia coli APEC O78   3 3
No Yes Escherichia coli O7:K1 str. CE10   2 2
No Yes Escherichia coli O104:H4 str. 2009EL-2050   2 2
No Yes Escherichia coli O104:H4 str. 2009EL-2071   2 2
No Yes Escherichia coli O104:H4 str. 2011C-3493   2 2
No Yes Escherichia coli NA114   3 3
No Yes Escherichia coli P12b   3 3
No Yes Escherichia coli str. 'clone D i2'   3 3
No Yes Escherichia coli str. 'clone D i14'   3 3
No Yes Escherichia coli UM146   3 3
No Yes Escherichia coli 042   2 2
No Yes Escherichia coli Xuzhou21   2 2
No Yes Escherichia coli IHE3034   3 3
No Yes Escherichia coli UMNK88   2 2
No Yes Escherichia coli O83:H1 str. NRG 857C   3 3
No Yes Escherichia coli ABU 83972   3 3
No Yes Escherichia coli KO11FL   2 2
No Yes Escherichia coli KO11FL   2 2
No Yes Escherichia coli LF82   3 3
No Yes Escherichia coli ED1a   2 2
No Yes Escherichia coli IAI39   2 2
No Yes Escherichia coli UMN026   2 2
No Yes Escherichia coli 55989   2 2
No Yes Escherichia coli S88   3 3
No Yes Escherichia coli IAI1   2 2
No Yes Escherichia coli W   2 2
No Yes Escherichia coli W   2 2
No Yes Escherichia coli DH1   3 3
No Yes Escherichia coli DH1   3 3
No Yes Escherichia coli ATCC 8739   3 3
No Yes Escherichia coli BL21(DE3)   3 3
No Yes Escherichia coli BL21(DE3)   3 3
No Yes Escherichia coli SMS-3-5   2 2
No Yes Escherichia coli SE15   3 3
No Yes Escherichia coli SE11   2 2
No Yes Escherichia coli APEC O1   3 3
No Yes Escherichia coli O103:H2 str. 12009   2 2
No Yes Escherichia coli UTI89   3 3
No Yes Escherichia coli 536   3 3
No Yes Escherichia coli HS   3 3
No Yes Escherichia coli E24377A   2 2
No Yes Escherichia coli ETEC H10407   3 3
No Yes Escherichia coli O55:H7 str. RM12579   3 3
No Yes Escherichia coli O55:H7 str. CB9615   3 3
No Yes Escherichia coli O26:H11 str. 11368   3 3
No Yes Escherichia coli CFT073   3 3
No Yes Escherichia coli O111:H- str. 11128   2 2
No Yes Escherichia coli O127:H6 str. E2348/69   2 2
No Yes Escherichia coli O157:H7 str. TW14359   2 2
No Yes Escherichia coli O157:H7 str. EC4115   2 2
No Yes Escherichia coli O157:H7 str. Sakai   2 2
No Yes Escherichia coli O157:H7 str. EDL933   2 2
No Yes Escherichia coli str. K-12 substr. MDS42   2 2
No Yes Escherichia coli BW2952   3 3
No Yes Escherichia coli str. K-12 substr. MG1655   3 3
No Yes Escherichia coli str. K-12 substr. W3110   3 3
No Yes Escherichia coli str. K-12 substr. DH10B   3 3
No Yes Escherichia coli B str. REL606   3 3
No Yes Erwinia pyrifoliae DSM 12163   3 3
No Yes Erwinia amylovora CFBP1430   3 3
No Yes Enterobacter cloacae SCF1   3 3
No Yes Enterobacter cloacae EcWSU1   3 3
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   4 4
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   2 2
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   3 3
No Yes Enterobacter aerogenes EA1509E   2 2
No Yes Azotobacter vinelandii CA6   5 5
No Yes Azotobacter vinelandii CA   5 5
No Yes Pseudomonas syringae pv. phaseolicola 1448A   3 3
No Yes Pseudomonas syringae pv. syringae B728a   2 2
No Yes Pseudomonas stutzeri CCUG 29243   3 3
No Yes Pseudomonas stutzeri DSM 10701   3 3
No Yes Pseudomonas stutzeri DSM 4166   3 3
No Yes Pseudomonas stutzeri RCH2   3 3
No Yes Pseudomonas stutzeri ATCC 17588 = LMG 11199   3 3
No Yes Pseudomonas monteilii SB3101   2 2
No Yes Pseudomonas monteilii SB3078   2 2
No Yes Pseudomonas putida H8234   3 3
No Yes Pseudomonas putida HB3267   3 3
No Yes Pseudomonas putida NBRC 14164   2 2
No Yes Pseudomonas putida DOT-T1E   2 2
No Yes Pseudomonas putida S16   2 2
No Yes Pseudomonas putida BIRD-1   2 2
No Yes Pseudomonas putida W619   2 2
No Yes Pseudomonas putida ND6   2 2
No Yes Pseudomonas putida KT2440   2 2
No Yes Pseudomonas putida GB-1   2 2
No Yes Pseudomonas denitrificans ATCC 13867   4 4
No Yes Pseudomonas protegens CHA0   4 4
No Yes Pseudomonas poae RE*1-1-14   5 5
No Yes Pseudomonas fluorescens F113   5 5
No Yes Pseudomonas fluorescens A506   5 5
No Yes Pseudomonas fluorescens R124   3 3
No Yes Pseudomonas fluorescens Pf0-1   3 3
No Yes Pseudomonas resinovorans NBRC 106553   2 2
No Yes Pseudomonas mendocina NK-01   3 3
No Yes Pseudomonas aeruginosa SCV20265   5 5
No Yes Pseudomonas aeruginosa MTB-1   5 5
No Yes Pseudomonas aeruginosa LES431   4 4
No Yes Pseudomonas aeruginosa RP73   4 4
No Yes Pseudomonas aeruginosa B136-33   4 4
No Yes Pseudomonas aeruginosa PA1R   4 4
No Yes Pseudomonas aeruginosa PA1   4 4
No Yes Pseudomonas aeruginosa DK2   4 4
No Yes Pseudomonas aeruginosa NCGM2.S1   4 4
No Yes Pseudomonas aeruginosa M18   4 4
No Yes Pseudomonas aeruginosa LESB58   4 4
No Yes Pseudomonas aeruginosa PA7   5 5
No Yes Pseudomonas aeruginosa PAO1   4 4
No Yes Acinetobacter genomosp. 13TU RUH2624   2 2
No Yes Acinetobacter sp. SH024   2 2
No Yes Acinetobacter calcoaceticus ruh2202   2 2
No Yes Acinetobacter baumannii ZW85-1   2 2
No Yes Acinetobacter baumannii TYTH-1   2 2
No Yes Acinetobacter baumannii BJAB0868   2 2
No Yes Acinetobacter baumannii BJAB0715   2 2
No Yes Acinetobacter baumannii BJAB07104   2 2
No Yes Acinetobacter baumannii TCDC-AB0715   2 2
No Yes Acinetobacter baumannii D1279779   3 3
No Yes Acinetobacter baumannii MDR-TJ   2 2
No Yes Acinetobacter baumannii 1656-2   2 2
No Yes Acinetobacter baumannii ATCC 19606   2 2
No Yes Acinetobacter baumannii AB307-0294   2 2
No Yes Acinetobacter baumannii AYE   3 3
No Yes Acinetobacter baumannii SDF   3 3
No Yes Acinetobacter baumannii MDR-ZJ06   2 2
No Yes Acinetobacter baumannii AB0057   2 2
No Yes Acinetobacter baumannii ACICU   2 2
No Yes Acinetobacter radioresistens SH164   2 2
No Yes Acinetobacter junii SH205   2 2
No Yes Acinetobacter johnsonii SH046   3 3
No Yes Acinetobacter lwoffii SH145   2 2
No Yes Methylophaga sp. JAM7   1 1
No Yes Cycloclasticus zancles 7-ME   1 1
No Yes Crinalium epipsammum PCC 9333   21 14
No Yes Arthrospira platensis NIES-39   24 12
No Yes Oscillatoria nigro-viridis PCC 7112   26 19
No Yes Oscillatoria acuminata PCC 6304   17 10
No Yes Chamaesiphon minutus PCC 6605   4 4
No Yes Cyanobacterium aponinum PCC 10605   2 2
No Yes Cyanobacterium stanieri PCC 7202   1 1
No Yes Cyanothece sp. PCC 7822   4 4
No Yes Cyanothece sp. PCC 7425   3 2
No Yes Cyanothece sp. PCC 7424   3 3
No Yes Cyanothece sp. ATCC 51142   2 2
No Yes Cyanothece sp. PCC 8801   1 1
No Yes Dactylococcopsis salina PCC 8305   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   1 1
No Yes Synechocystis sp. PCC 6803 substr. GT-I   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Synechococcus sp. PCC 7002   7 4
No Yes Synechococcus elongatus PCC 6301   1 1
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   1 1
No Yes Stanieria cyanosphaera PCC 7437   1 1
No Yes Chroococcidiopsis thermalis PCC 7203   2 2
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   1 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   29 15
No Yes Cylindrospermum stagnale PCC 7417   17 10
No Yes Anabaena cylindrica PCC 7122   15 10
No Yes Methanolobus psychrophilus R15   1 1
No Yes Methanosarcina mazei Tuc01   1 1
No Yes Methanobacterium sp. SWAN-1   3 3
No Yes Homo sapiens (NCBI version) Human 21 21
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 21 21
No Yes Loa loa v3.3 (Request) Eye worm 2 2
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 2 2
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 1 1
No Yes Lotus japonicus (Early assembly)   10 10
No Yes Malus x domestica (Duplicate) Apple 20 20
No Yes Ricinus communis (Early assembly) Castor bean 10 10
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   5 5
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 6 6
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 6 6
No Yes Phoenix dactylifera (Early draft) Date palm 1 1
No Yes Mycobacterium tuberculosis H37Rv (Duplicate of ex)   2 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   1 1
No Yes Homo sapiens 69_37 Human 21 21
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 17 17
No Yes Gorilla gorilla 69_3.1 Western gorilla 19 19
No Yes Pongo abelii 69_2 Sumatran orangutan 17 17
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 18 18
No Yes Macaca mulatta 69_1 Rhesus monkey 21 21
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 19 19
No Yes Otolemur garnettii 69_3 Small-eared galago 20 20
No Yes Microcebus murinus 69_1 Gray mouse lemur 15 15
No Yes Tarsius syrichta 69_1 Philippine tarsier 14 14
No Yes Rattus norvegicus 69_3.4 Norway rat 24 24
No Yes Mus musculus 69_38 House mouse 21 21
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 19 19
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 14 14
No Yes Cavia porcellus 69_3 Domestic guinea pig 14 14
No Yes Oryctolagus cuniculus 69_2 Rabbit 18 18
No Yes Ochotona princeps 69 American pika 19 19
No Yes Tupaia belangeri 69 Northern tree shrew 15 15
No Yes Sus scrofa 69_10.2 Pig 18 18
No Yes Bos taurus 69_3.1 Cattle 18 18
No Yes Vicugna pacos 69_1 Alpaca 8 8
No Yes Tursiops truncatus 69_1 Bottlenosed dolphin 12 12
No Yes Mustela putorius furo 69_1.0 Domestic ferret 17 17
No Yes Ailuropoda melanoleuca 69_1 Giant panda 20 20
No Yes Canis familiaris 69_3.1 Dog 21 21
No Yes Felis catus 69 Domestic cat 14 14
No Yes Equus caballus 69_2 Horse 16 16
No Yes Myotis lucifugus 69_2.0 Little brown bat 18 18
No Yes Pteropus vampyrus 69_1 Large flying fox 19 19
No Yes Sorex araneus 69_1 European shrew 10 10
No Yes Erinaceus europaeus 69 Western European hedgehog 14 14
No Yes Procavia capensis 69_1 Cape rock hyrax 18 18
No Yes Loxodonta africana 69_3 African savanna elephant 22 22
No Yes Echinops telfairi 69 Small Madagascar hedgehog 15 15
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 14 14
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 10 10
No Yes Macropus eugenii 69_1.0 Tammar wallaby 14 14
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 18 18
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 17 17
No Yes Ornithorhynchus anatinus 69_5 Platypus 15 15
No Yes Petromyzon marinus 69_7.0 Sea lamprey 6 6
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 11 11
No Yes Meleagris gallopavo 69_2 Turkey 10 10
No Yes Gallus gallus 69_2 Chicken 11 11
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 12 12
No Yes Anolis carolinensis 69_2.0 Green anole 18 18
No Yes Xenopus tropicalis 69_4.2 Western clawed frog 26 26
No Yes Latimeria chalumnae 69_1 Coelacanth 21 21
No Yes Gadus morhua 69_1 Atlantic cod 15 15
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 19 19
No Yes Takifugu rubripes 69_4 Torafugu 16 16
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 19 19
No Yes Oryzias latipes 69_1 Japanese medaka 19 19
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 18 18
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 21 21
No Yes Danio rerio 69_9 Zebrafish 23 23
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 7 7
No Yes Ciona intestinalis 69 Vase tunicate 6 6
No Yes Drosophila melanogaster 69_5 Fruit fly 2 2
No Yes Caenorhabditis elegans 69_215 Roundworm 4 4
No Yes Arabidopsis thaliana 10 Thale cress 6 6
No Yes 1_050719N (meta-genome)   4 4
No Yes 2_050719S (meta-genome)   4 4
No Yes 3_050719R (meta-genome)   7 7
No Yes 4_050719Q (meta-genome)   11 11
No Yes 4_Deep_abyss (meta-genome)   4 4
No Yes 5_050719P (meta-genome)   5 4
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   2 2
No Yes 7_Oxygen_minimum_layer (meta-genome)   4 4
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   4 4
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   4 4
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   22 22
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   41 36
No Yes Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome)   2 2
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   13 13
No Yes Bath Hot Springs, planktonic community (meta-genome)   3 3
No Yes Combined (meta-genome)   51 51
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   34 34
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   15 15
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   18 18
No Yes Dump bottom (Dump bottom) (meta-genome)   136 127
No Yes Dump top (Dump top) (meta-genome)   99 92
No Yes Endophytic microbiome from Rice (meta-genome)   23 23
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   14 14
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   29 27
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   17 17
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   14 14
No Yes Fungus garden combined (combined) (meta-genome)   25 25
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   47 47
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   54 54
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   2 1
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   4 3
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   4 3
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   3 2
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   3 2
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   3 3
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   7 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP10 from Narrow Gauge (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   9 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   8 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   9 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   11 10
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   9 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   27 23
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   2 2
No Yes Human Gut Community Subject 7 (meta-genome)   14 10
No Yes Human Gut Community Subject 8 (meta-genome)   13 12
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   36 32
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   33 32
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   20 20
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   68 65
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   19 18
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   15 15
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   21 19
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   11 11
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   39 38
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   19 19
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   15 15
No Yes Mouse Gut Community lean3 (meta-genome)   1 1
No Yes Mouse Gut Community ob1 (meta-genome)   1 1
No Yes Mouse Gut Community ob2 (meta-genome)   3 2
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   81 76
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   7 7
No Yes Protozoadb 2010_08 (Protozoadb)   2 2
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   53 50
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   49 42
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   58 58
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   13 12
No Yes Sludge/US, Jazz Assembly (meta-genome)   8 8
No Yes Sludge/US, Phrap Assembly (meta-genome)   14 14
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   63 61
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   142 137
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   163 148
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   77 71
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   98 88
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   84 83
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   101 95
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   14 12
No Yes STRING v9.0.5 (STRING)   3018 2728
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   7 7
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   60 60
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   14 14
No Yes Termite Protist Endosymbiont Community (meta-genome)   2 2
No Yes Uniprot 2014_06   34237 31268
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   1 1
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   23 20
No Yes Global Ocean Sampling Expedition (GOS)   2777 2419
No Yes NCBI plasmid sequences (Plasmids)   177 148
No Yes NCBI viral sequences (Viral)   148 143
No Yes PDB chains (SCOP 1.75) (PDB)   7 7
No Yes Protein Data Bank (all PDB sequenc)   47 47
No Yes TargetDB (Targets)   98 86
No Yes The Salmonella enterica Pan-genome (meta-genome)   63 63
No Yes UniProt viral sequences (Viral)   59 58

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