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Cyclin-like superfamily domain assignments
in
Archaeoglobus fulgidus DSM 4304

Assignment details

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Archaeoglobus fulgidus DSM 4304 has 2 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|11498897|ref|NP_070128.1|   3.61e-33   234-324   Transcription factor IIB (TFIIB), core domain  
  2.75e-29   137-231   Transcription factor IIB (TFIIB), core domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   198369 198369
No Yes Homo sapiens 76_38 Human 252 170
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 72 43
No Yes Gorilla gorilla 76_3.1 Western gorilla 96 58
No Yes Pongo abelii 76_2 Sumatran orangutan 77 46
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 80 47
No Yes Papio anubis 76 Olive baboon 87 52
No Yes Macaca mulatta 76_1 Rhesus monkey 106 73
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 146 94
No Yes Otolemur garnettii 76_3 Small-eared galago 78 44
No Yes Microcebus murinus 76_1 Gray mouse lemur 61 40
No Yes Rattus norvegicus 76_5.0 Norway rat 69 41
No Yes Mus musculus 76_38 House mouse 132 81
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 56 35
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 70 43
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 100 63
No Yes Cavia porcellus 76_3 Domestic guinea pig 77 48
No Yes Oryctolagus cuniculus 76_2 Rabbit 76 49
No Yes Ochotona princeps 76 American pika 58 34
No Yes Tupaia belangeri 76 Northern tree shrew 60 38
No Yes Sus scrofa 76_10.2 Pig 78 52
No Yes Bos taurus 76_3.1 Cattle 78 47
No Yes Ovis aries 76_3.1 Sheep 84 48
No Yes Vicugna pacos 76_1 Alpaca 43 24
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 65 38
No Yes Mustela putorius furo 76_1.0 Domestic ferret 68 38
No Yes Ailuropoda melanoleuca 76_1 Giant panda 71 42
No Yes Canis familiaris 76_3.1 Dog 94 55
No Yes Felis catus 76_6.2 Domestic cat 69 39
No Yes Equus caballus 76_2 Horse 67 39
No Yes Myotis lucifugus 76_2.0 Little brown bat 86 54
No Yes Pteropus vampyrus 76_1 Large flying fox 65 41
No Yes Sorex araneus 76_1 European shrew 55 37
No Yes Erinaceus europaeus 76 Western European hedgehog 49 30
No Yes Procavia capensis 76_1 Cape rock hyrax 63 39
No Yes Loxodonta africana 76_3 African savanna elephant 85 51
No Yes Echinops telfairi 76 Small Madagascar hedgehog 53 33
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 89 51
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 51 31
No Yes Macropus eugenii 76_1.0 Tammar wallaby 52 31
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 82 47
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 88 50
No Yes Ornithorhynchus anatinus 76_5 Platypus 69 40
No Yes Saccoglossus kowalevskii v3.0   94 55
No Yes Petromyzon marinus 76_7.0 Sea lamprey 35 21
No Yes Meleagris gallopavo 76_2 Turkey 61 40
No Yes Gallus gallus 76_4 Chicken 63 38
No Yes Anas platyrhynchos 76_1.0 Mallard 60 37
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 62 37
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 64 38
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 67 38
No Yes Anolis carolinensis 76_2.0 Green anole 60 36
No Yes Xenopus laevis African clawed frog 264 148
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 108 67
No Yes Latimeria chalumnae 76_1 Coelacanth 86 50
No Yes Lepisosteus oculatus 76 Spotted gar 76 46
No Yes Gadus morhua 76_1 Atlantic cod 86 49
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 93 57
No Yes Takifugu rubripes 76_4 Torafugu 230 133
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 105 67
No Yes Oryzias latipes 76_1 Japanese medaka 90 59
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 82 54
No Yes Poecilia formosa 76 Amazon molly 88 53
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 113 70
No Yes Astyanax mexicanus 76 Mexican tetra 83 49
No Yes Danio rerio 76_9 Zebrafish 125 82
No Yes Oikopleura dioica   46 27
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 44 27
No Yes Ciona intestinalis 76 Vase tunicate 38 21
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 57 38
No Yes Adineta vaga   115 70
No Yes Octopus bimaculoides 280   57 36
No Yes Crassostrea gigas 22 Pacific oyster 46 27
No Yes Lottia gigantea Owl limpet 44 26
No Yes Helobdella robusta   52 31
No Yes Capitella sp. I   47 29
No Yes Danaus plexippus OGS1.0 Monarch butterfly 42 27
No Yes Heliconius melpomene Postman butterfly 40 23
No Yes Bombyx mori Domestic silkworm 32 24
No Yes Nasonia vitripennis Jewel wasp 32 18
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 76 45
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 33 21
No Yes Linepithema humile v1.1 Argentine ant 33 21
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 35 23
No Yes Solenopsis invicta v.2.2.3 Red fire ant 36 24
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 35 22
No Yes Atta cephalotes v1.1   35 22
No Yes Camponotus floridanus v3.3 Florida carpenter ant 33 21
No Yes Lucilia cuprina Australian sheep blowfly 33 20
No Yes Drosophila grimshawi 1.3   47 26
No Yes Drosophila willistoni 1.3   40 23
No Yes Drosophila pseudoobscura 2.13   46 27
No Yes Drosophila persimilis 1.3   44 25
No Yes Drosophila suzukii   39 24
No Yes Drosophila yakuba 1.3   40 23
No Yes Drosophila simulans 1.3   35 21
No Yes Drosophila sechellia 1.3   34 20
No Yes Drosophila melanogaster 76_5 Fruit fly 91 55
No Yes Drosophila erecta 1.3   35 21
No Yes Drosophila ananassae 1.3   35 20
No Yes Drosophila virilis 1.2   39 23
No Yes Drosophila mojavensis 1.3   37 21
No Yes Megaselia scalaris 22   9 7
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 45 25
No Yes Culex pipiens quinquefasciatus Southern house mosquito 45 29
No Yes Anopheles darlingi 22 American malaria mosquito 31 20
No Yes Anopheles gambiae 49_3j African malaria mosquito 41 25
No Yes Tribolium castaneum 3.0 Red flour beetle 38 24
No Yes Pediculus humanus corporis (Early assembly) Human body louse 33 21
No Yes Acyrthosiphon pisum Pea aphid 35 21
No Yes Rhodnius prolixus 22   34 21
No Yes Daphnia pulex Common water flea 58 36
No Yes Strigamia maritima 22   54 30
No Yes Sarcoptes scabiei   29 17
No Yes Tetranychus urticae Two-spotted spider mite 34 20
No Yes Ixodes scapularis (Preliminary) Black-legged tick 37 25
No Yes Pristionchus pacificus   38 27
No Yes Meloidogyne incognita Southern root-knot nematode 39 26
No Yes Meloidogyne hapla   25 15
No Yes Onchocerca volvulus 22   36 22
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 46 29
No Yes Caenorhabditis japonica   33 21
No Yes Caenorhabditis brenneri   59 34
No Yes Caenorhabditis remanei   57 34
No Yes Caenorhabditis elegans 76_235 Roundworm 93 66
No Yes Caenorhabditis briggsae 2   36 23
No Yes Trichinella spiralis 22   31 19
No Yes Hymenolepis microstoma   34 21
No Yes Echinococcus multilocularis   48 28
No Yes Echinococcus granulosus   49 28
No Yes Taenia solium Pork tapeworm 45 28
No Yes Schistosoma mansoni   39 23
No Yes Mnemiopsis leidyi Sea walnut 34 21
No Yes Thelohanellus kitauei   16 11
No Yes Acropora digitifera v1.0   30 21
No Yes Nematostella vectensis 1.0 Starlet sea anemone 43 27
No Yes Hydra vulgaris   31 17
No Yes Amphimedon queenslandica   39 26
No Yes Trichoplax adhaerens   38 23
No Yes Proterospongia sp. ATCC 50818   33 21
No Yes Monosiga brevicollis   26 19
No Yes Sphaeroforma arctica JP610   36 25
No Yes Capsaspora owczarzaki ATCC 30864   32 21
No Yes Conidiobolus coronatus NRRL28638 v1.0   37 23
No Yes Mortierella verticillata NRRL 6337   38 23
No Yes Phycomyces blakesleeanus   53 43
No Yes Rhizopus oryzae RA 99-880   46 40
No Yes Mucor circinelloides   40 32
No Yes Rhizomucor miehei CAU432   32 23
No Yes Malassezia globosa CBS 7966   38 22
No Yes Sporisorium reilianum 22   24 14
No Yes Ustilago maydis   23 13
No Yes Mixia osmundae IAM 14324 v1.0   25 15
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   30 17
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   31 21
No Yes Melampsora laricis-populina   26 16
No Yes Rhodotorula graminis WP1 v1.0   27 17
No Yes Sporobolomyces roseus IAM 13481   22 15
No Yes Microbotryum violaceum 22   28 18
No Yes Wallemia sebi v1.0   27 17
No Yes Sphaerobolus stellatus v1.0   31 20
No Yes Piloderma croceum F 1598 v1.0   28 18
No Yes Serpula lacrymans var. lacrymans S7.9   37 21
No Yes Coniophora puteana   30 21
No Yes Hydnomerulius pinastri v2.0   26 16
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   28 18
No Yes Pisolithus microcarpus 441 v1.0   31 20
No Yes Pisolithus tinctorius Marx 270 v1.0   30 19
No Yes Scleroderma citrinum Foug A v1.0   39 25
No Yes Coprinopsis cinerea okayama7 130 v3   33 22
No Yes Pleurotus ostreatus Oyster mushroom 27 17
No Yes Amanita thiersii Skay4041 v1.0   29 18
No Yes Amanita muscaria Koide v1.0 Fly agaric 29 18
No Yes Galerina marginata v1.0   33 21
No Yes Hebeloma cylindrosporum h7 v2.0   32 21
No Yes Laccaria bicolor S238N-H82   34 22
No Yes Agaricus bisporus var. bisporus   27 16
No Yes Schizophyllum commune   32 22
No Yes Stereum hirsutum FP-91666 SS1 v1.0   26 16
No Yes Heterobasidion annosum   28 17
No Yes Gloeophyllum trabeumv1.0   28 18
No Yes Punctularia strigosozonata v1.0   22 13
No Yes Sebacina vermifera MAFF 305830 v1.0   25 15
No Yes Fomitiporia mediterranea v1.0   28 18
No Yes Tulasnella calospora AL13/4D v1.0   27 16
No Yes Postia placenta   50 34
No Yes Wolfiporia cocos MD-104 SS10 v1.0   28 18
No Yes Fomitopsis pinicolav1.0   34 24
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   32 22
No Yes Phanerochaete chrysosporium RP-78 2.1   27 18
No Yes Dichomitus squalens   31 20
No Yes Trametes versicolor v1.0   29 19
No Yes Tremella mesenterica Witches' butter 20 12
No Yes Daldinia eschscholzii EC12 v1.0   23 13
No Yes Apiospora montagnei NRRL 25634 v1.0   28 17
No Yes Magnaporthe poae ATCC 64411 22   23 14
No Yes Magnaporthe grisea 70-15   27 16
No Yes Podospora anserina   24 14
No Yes Sporotrichum thermophile ATCC 42464   22 12
No Yes Thielavia terrestris NRRL 8126   26 16
No Yes Chaetomium globosum CBS 148.51   22 14
No Yes Neurospora tetrasperma   25 15
No Yes Neurospora discreta FGSC 8579   25 15
No Yes Neurospora crassa OR74A   27 16
No Yes Cryphonectria parasitica Chestnut blight fungus 22 12
No Yes Verticillium albo-atrum VaMs.102   24 15
No Yes Verticillium dahliae VdLs.17   26 16
No Yes Acremonium alcalophilumv 1.0   24 14
No Yes Glomerella graminicola 22   24 14
No Yes Fusarium graminearum   23 13
No Yes Nectria haematococca mpVI   29 17
No Yes Fusarium oxysporum f. sp. lycopersici 4286   28 16
No Yes Fusarium verticillioides 7600   22 13
No Yes Trichoderma asperellum CBS 433.97 v1.0   24 14
No Yes Trichoderma atroviride   24 14
No Yes Trichoderma citrinoviride v1.0   23 13
No Yes Trichoderma reesei 1.2   24 14
No Yes Trichoderma virens Gv29-8   25 15
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   23 14
No Yes Trichoderma harzianum CBS 226.95 v1.0   24 14
No Yes Amorphotheca resinae v1.0 Creosote fungus 25 15
No Yes Botrytis cinerea B05.10   18 11
No Yes Sclerotinia sclerotiorum   22 12
No Yes Blumeria graminis 22   21 12
No Yes Didymella exigua CBS 183.55 v1.0   24 14
No Yes Leptosphaeria maculans 22   25 15
No Yes Setosphaeria turcica v1.0   30 18
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   24 14
No Yes Cochliobolus victoriae FI3 v1.0   24 14
No Yes Cochliobolus carbonum 26-R-13 v1.0   24 14
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 25 14
No Yes Alternaria brassicicola   25 15
No Yes Cochliobolus lunatus m118 v2.0   24 14
No Yes Pyrenophora teres f. teres 22   24 14
No Yes Pyrenophora tritici-repentis   24 14
No Yes Stagonospora nodorum   23 15
No Yes Mycosphaerella graminicola IPO323   25 15
No Yes Zasmidium cellare ATCC 36951 v1.0   25 15
No Yes Dothistroma septosporum   24 14
No Yes Septoria musiva v1.0   24 14
No Yes Mycosphaerella fijiensis CIRAD86   23 13
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   25 15
No Yes Paracoccidioides brasiliensis Pb18   23 13
No Yes Coccidioides posadasii RMSCC 3488   23 13
No Yes Coccidioides immitis RS   23 13
No Yes Ajellomyces dermatitidis SLH14081   22 13
No Yes Histoplasma capsulatum class NAmI strain WU24   19 11
No Yes Microsporum canis CBS 113480   23 13
No Yes Trichophyton equinum CBS 127.97   23 13
No Yes Trichophyton verrucosum HKI 0517   23 13
No Yes Arthroderma benhamiae CBS 112371   21 12
No Yes Trichophyton tonsurans CBS 112818   21 13
No Yes Trichophyton rubrum CBS 118892   23 13
No Yes Uncinocarpus reesii 1704   21 13
No Yes Aspergillus zonatus v1.0   25 15
No Yes Penicillium chrysogenum Wisconsin 54-1255   29 19
No Yes Penicillium chrysogenum v1.0   27 17
No Yes Aspergillus acidus v1.0   23 14
No Yes Aspergillus fumigatus Af293   26 16
No Yes Aspergillus brasiliensis v1.0   26 16
No Yes Aspergillus nidulans FGSC A4   27 17
No Yes Aspergillus sydowii v1.0   26 16
No Yes Aspergillus versicolor v1.0   26 16
No Yes Aspergillus glaucus   26 16
No Yes Aspergillus carbonarius ITEM 5010   26 16
No Yes Neosartorya fischeri NRRL 181   25 16
No Yes Aspergillus terreus NIH2624   24 15
No Yes Aspergillus tubingensis v1.0   24 15
No Yes Aspergillus wentii v1.0   25 15
No Yes Aspergillus oryzae RIB40   24 15
No Yes Aspergillus niger 22   24 16
No Yes Aspergillus niger ATCC 1015   15 9
No Yes Aspergillus flavus NRRL3357   26 16
No Yes Aspergillus clavatus NRRL 1   24 15
No Yes Penicillium marneffei ATCC 18224   30 19
No Yes Tuber melanosporum Mel28 22   25 15
No Yes Tuber melanosporum Vittad Perigord truffle 26 16
No Yes Hansenula polymorpha v2.0   26 16
No Yes Dekkera bruxellensis CBS 2499 v2.0   25 15
No Yes Pichia membranifaciensv1.0   23 14
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   21 14
No Yes Candida dubliniensis CD36   25 16
No Yes Candida tropicalis MYA-3404   24 16
No Yes Candida parapsilosis   27 18
No Yes Candida albicans SC5314   25 16
No Yes Lodderomyces elongisporus NRRL YB-4239   21 14
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   24 16
No Yes Pichia stipitis CBS 6054   22 14
No Yes Candida guilliermondii ATCC 6260   26 17
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   22 14
No Yes Debaromyces hansenii   23 15
No Yes Wickerhamomyces anomalus   25 16
No Yes Pichia pastoris GS115   21 14
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   24 17
No Yes Yarrowia lipolytica CLIB122   23 14
No Yes Candida lusitaniae ATCC 42720   25 18
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   23 15
No Yes Vanderwaltozyma polyspora DSM 70294   29 20
No Yes Candida glabrata CBS138   31 20
No Yes Kluyveromyces thermotolerans CBS 6340   25 17
No Yes Lachancea kluyveri   26 17
No Yes Kluyveromyces waltii   27 18
No Yes Ashbya gossypii ATCC 10895   24 16
No Yes Zygosaccharomyces rouxii   28 18
No Yes Saccharomyces mikatae MIT   30 20
No Yes Saccharomyces paradoxus MIT   31 20
No Yes Saccharomyces cerevisiae 76 Baker's yeast 30 19
No Yes Saccharomyces bayanus MIT   28 17
No Yes Kluyveromyces lactis   24 16
No Yes Schizosaccharomyces cryophilus OY26 22   24 13
No Yes Schizosaccharomyces octosporus yFS286   24 13
No Yes Schizosaccharomyces japonicus yFS275   25 13
No Yes Schizosaccharomyces pombe Fission yeast 26 15
No Yes Catenaria anguillulae PL171 v1.0   32 24
No Yes Allomyces macrogynus ATCC 38327   70 52
No Yes Spizellomyces punctatus DAOM BR117   36 23
No Yes Dictyostelium discoideum   34 23
No Yes Dictyostelium purpureum   31 20
No Yes Entamoeba dispar 1.2   25 15
No Yes Entamoeba invadens 1.2   21 14
No Yes Entamoeba histolytica 1   22 13
No Yes Selaginella moellendorffii   78 48
No Yes Pinus taeda Loblolly pine 144 92
No Yes Picea abies Norway spruce 88 54
No Yes Eucalyptus grandis v201 Rose gum 97 60
No Yes Theobroma cacao B97-61/B2 v1 Cacao 85 52
No Yes Gossypium raimondii v221   354 214
No Yes Citrus clementina v165   123 72
No Yes Citrus sinensis v154 Sweet orange 137 85
No Yes Thellungiella halophila v173   119 68
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 182 102
No Yes Capsella rubella v183   114 65
No Yes Arabidopsis lyrata Lyrate rockcress 114 68
No Yes Arabidopsis thaliana 10 Thale cress 127 76
No Yes Carica papaya Papaya 68 40
No Yes Medicago truncatula Barrel medic 174 103
No Yes Phaseolus vulgaris v186 French bean 123 70
No Yes Glycine max v109 Soybean 221 131
No Yes Cucumis sativus v122 Cucumber 127 77
No Yes Fragaria vesca Wild strawberry 103 57
No Yes Malus domestica v196 Apple 202 130
No Yes Prunus persica v139 Peach 90 51
No Yes Linum usitatissimum v200 Flax 137 79
No Yes Manihot esculenta v147 Cassava 123 74
No Yes Populus trichocarpa v156 Black cottonwood 153 96
No Yes Vitis vinifera Wine grape 91 53
No Yes Mimulus guttatus v140 Spotted monkey flower 98 58
No Yes Solanum lycopersicum v.2.3 Tomato 109 63
No Yes Solanum tuberosum Potato 172 105
No Yes Actinidia chinensis Hongyang   100 64
No Yes Aquilegia coerulea v195   148 91
No Yes Triticum urartu 22   72 50
No Yes Triticum aestivum 22 Bread wheat 251 163
No Yes Aegilops tauschii 22   93 56
No Yes Brachypodium distachyon Stiff brome 112 70
No Yes Oryza barthii 22 African wild rice 127 69
No Yes Oryza meridionalis 22   101 56
No Yes Oryza glumaepatula 22   129 75
No Yes Oryza glaberrima African rice 76 47
No Yes Oryza punctata 22   142 76
No Yes Oryza nivara 22   152 82
No Yes Oryza brachyantha 22 Malo sina 96 57
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 150 89
No Yes Oryza sativa v193 Rice 151 90
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 114 74
No Yes Panicum virgatum v202 Switchgrass 182 114
No Yes Setaria italica v164 Foxtail millet 105 63
No Yes Zea mays subsp. mays Maize 233 155
No Yes Zea mays v181 Maize 246 168
No Yes Sorghum bicolor Sorghum 98 62
No Yes Musa balbisiana Balbis banana 136 83
No Yes Musa acuminata 22 Wild Malaysian banana 146 87
No Yes Amborella trichopoda 22   48 30
No Yes Physcomitrella patens   64 36
No Yes Coccomyxa subellipsoidea sp. C-169 v2   26 16
No Yes Asterochloris sp. Cgr/DA1pho v1.0   26 17
No Yes Chlorella variabilis sp. NC64A   28 17
No Yes Chlorella vulgaris   33 21
No Yes Volvox carteri f. nagariensis   39 26
No Yes Volvox carteri v199   45 29
No Yes Chlamydomonas reinhardtii 4.0   41 25
No Yes Ostreococcus sp. RCC809   22 12
No Yes Ostreococcus lucimarinus CCE9901   26 14
No Yes Ostreococcus tauri   23 13
No Yes Bathycoccus prasinos   24 13
No Yes Micromonas sp. RCC299   21 11
No Yes Micromonas pusilla CCMP1545 v3.0   24 13
No Yes Cyanidioschyzon merolae strain 10D 22   19 14
No Yes Cyanidioschyzon merolae   19 14
No Yes Porphyridium purpureum 02_2012   36 27
No Yes Thecamonas trahens ATCC 50062   27 17
No Yes Bigelowiella natans CCMP2755 22   45 31
No Yes Giardia lamblia 2.3   19 15
No Yes Cyanophora paradoxa   27 18
No Yes Leishmania mexicana 2.4   17 14
No Yes Leishmania major strain Friedlin   17 14
No Yes Leishmania infantum JPCM5 2.4   17 14
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   17 14
No Yes Trypanosoma vivax   13 11
No Yes Trypanosoma cruzi strain CL Brener   16 12
No Yes Trypanosoma congolense 2.4   14 11
No Yes Trypanosoma brucei gambiense v4.1   16 14
No Yes Trypanosoma brucei TREU927 v4.1   16 14
No Yes Ectocarpus siliculosus   36 26
No Yes Aureococcus anophagefferens   22 17
No Yes Albugo laibachii 22   33 20
No Yes Pythium iwayamai DAOM BR242034 22   47 28
No Yes Pythium arrhenomanes ATCC 12531 22   37 25
No Yes Pythium ultimum v1.7-2   37 23
No Yes Pythium aphanidermatum DAOM BR444 22   38 23
No Yes Pythium irregulare DAOM BR486 22   42 25
No Yes Pythium vexans DAOM BR484 22   34 21
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 35 22
No Yes Phytophthora sojae 1.1   41 25
No Yes Phytophthora infestans T30-4   42 27
No Yes Phytophthora capsici   37 24
No Yes Hyaloperonospora arabidopsidis 22   31 20
No Yes Phaeodactylum tricornutumCCAP 1055/1   43 29
No Yes Fragilariopsis cylindrus   75 53
No Yes Thalassiosira pseudonana CCMP1335   72 60
No Yes Perkinsus marinus ATCC 50983   75 53
No Yes Paramecium tetraurelia   204 155
No Yes Tetrahymena thermophila SB210 1   58 38
No Yes Ichthyophthirius multifiliis strain G5   32 23
No Yes Cryptosporidium hominis   16 12
No Yes Cryptosporidium muris   17 12
No Yes Cryptosporidium parvum Iowa II   17 13
No Yes Neospora caninum   13 10
No Yes Toxoplasma gondii VEG   14 11
No Yes Toxoplasma gondii ME49   14 11
No Yes Toxoplasma gondii GT1   11 9
No Yes Babesia bovis T2Bo   20 16
No Yes Theileria parva   11 8
No Yes Theileria annulata   12 9
No Yes Plasmodium falciparum 3D7   14 10
No Yes Plasmodium vivax SaI-1 7.0   11 8
No Yes Plasmodium knowlesi strain H   10 7
No Yes Plasmodium yoelii ssp. yoelii 1   11 9
No Yes Plasmodium chabaudi   11 8
No Yes Plasmodium berghei ANKA   10 7
No Yes Symbiodinium minutum clade B1 v1.2   39 27
No Yes Naegleria gruberi   33 19
No Yes Trichomonas vaginalis   64 44
No Yes Guillardia theta CCMP2712 v1.0   56 39
No Yes Emiliania huxleyi CCMP1516   58 37
No Yes Candidatus Desulforudis audaxviator MP104C   1 1
No Yes Clostridium difficile 630   1 1
No Yes Mahella australiensis 50-1 BON   1 1
No Yes Exiguobacterium sp. MH3   1 1
No Yes Exiguobacterium sibiricum 255-15   1 1
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446   1 1
No Yes Paenibacillus sp. JDR-2   1 1
No Yes Geobacillus thermoleovorans CCB_US3_UF5   1 1
No Yes Bacillus sp. JS   1 1
No Yes Bacillus amyloliquefaciens FZB42   1 1
No Yes Bacillus atrophaeus 1942   1 1
No Yes Bacillus subtilis subsp. subtilis str. 168   1 1
No Yes Bacillus clausii KSM-K16   1 1
No Yes Tannerella forsythia ATCC 43037   1 1
No Yes Coxiella burnetii Dugway 5J108-111   1 1
No Yes Pseudomonas putida F1   1 1
No Yes Nanoarchaeum equitans Kin4-M   2 1
No Yes Candidatus Caldiarchaeum subterraneum   6 3
No Yes Cenarchaeum symbiosum A   10 5
No Yes Candidatus Nitrosopumilus sp. AR2   20 10
No Yes Nitrosopumilus maritimus SCM1   16 8
No Yes Candidatus Korarchaeum cryptofilum OPF8   4 2
No Yes Acidilobus saccharovorans 345-15   3 2
No Yes Fervidicoccus fontis Kam940   4 2
No Yes Pyrolobus fumarii 1A   4 2
No Yes Hyperthermus butylicus DSM 5456   4 2
No Yes Thermogladius cellulolyticus 1633   4 2
No Yes Ignisphaera aggregans DSM 17230   4 2
No Yes Aeropyrum pernix K1   4 2
No Yes Ignicoccus hospitalis KIN4/I   2 1
No Yes Thermosphaera aggregans DSM 11486   4 2
No Yes Staphylothermus hellenicus DSM 12710   4 2
No Yes Staphylothermus marinus F1   4 2
No Yes Desulfurococcus fermentans DSM 16532   5 3
No Yes Desulfurococcus kamchatkensis 1221n   4 2
No Yes Desulfurococcus mucosus DSM 2162   5 3
No Yes Metallosphaera cuprina Ar-4   4 2
No Yes Metallosphaera sedula DSM 5348   4 2
No Yes Acidianus hospitalis W1   6 3
No Yes Sulfolobus tokodaii str. 7   4 2
No Yes Sulfolobus islandicus Y.N.15.51   4 2
No Yes Sulfolobus solfataricus P2   4 2
No Yes Sulfolobus acidocaldarius DSM 639   4 2
No Yes Thermofilum sp. 1910b   4 2
No Yes Thermofilum pendens Hrk 5   4 2
No Yes Vulcanisaeta moutnovskia 768-28   6 3
No Yes Vulcanisaeta distributa DSM 14429   6 3
No Yes Caldivirga maquilingensis IC-167   4 2
No Yes Pyrobaculum sp. 1860   6 4
No Yes Pyrobaculum calidifontis JCM 11548   6 4
No Yes Pyrobaculum arsenaticum DSM 13514   6 4
No Yes Pyrobaculum oguniense TE7   6 4
No Yes Thermoproteus neutrophilus V24Sta   6 4
No Yes Pyrobaculum aerophilum str. IM2   6 4
No Yes Pyrobaculum islandicum DSM 4184   6 4
No Yes Thermoproteus uzoniensis 768-20   6 4
No Yes Thermoproteus tenax Kra 1   6 4
No Yes halophilic archaeon DL31   18 10
No Yes Methanocella arvoryzae MRE50   2 1
No Yes Methanocella conradii HZ254   2 1
No Yes Methanocella paludicola SANAE   2 1
No Yes Methanosaeta harundinacea 6Ac   2 1
No Yes Methanosaeta thermophila PT   2 1
No Yes Methanosaeta concilii GP6   2 1
No Yes Methanosalsum zhilinae DSM 4017   2 1
No Yes Methanohalobium evestigatum Z-7303   4 2
No Yes Methanococcoides burtonii DSM 6242   2 1
No Yes Methanosarcina acetivorans C2A   2 1
No Yes Methanosarcina mazei Go1   2 1
No Yes Methanosarcina barkeri str. Fusaro   2 1
No Yes Methanohalophilus mahii DSM 5219   2 1
No Yes Methanosphaerula palustris E1-9c   2 1
No Yes Methanoregula boonei 6A8   2 1
No Yes Methanospirillum hungatei JF-1   2 1
No Yes Methanocorpusculum labreanum Z   2 1
No Yes Methanoplanus petrolearius DSM 11571   2 1
No Yes Methanoculleus bourgensis MS2   2 1
No Yes Methanoculleus marisnigri JR1   2 1
No Yes Methanopyrus kandleri AV19   5 2
No Yes Ferroglobus placidus DSM 10642   4 2
No Yes Archaeoglobus profundus DSM 5631   2 1
No Yes Archaeoglobus veneficus SNP6   2 1
No Yes Archaeoglobus fulgidus DSM 4304   2 1
No Yes Thermococcus sp. 4557   4 2
No Yes Thermococcus onnurineus NA1   4 2
No Yes Thermococcus kodakarensis KOD1   4 2
No Yes Thermococcus gammatolerans EJ3   4 2
No Yes Thermococcus sibiricus MM 739   4 2
No Yes Thermococcus barophilus MP   6 3
No Yes Pyrococcus sp. ST04   4 2
No Yes Pyrococcus yayanosii CH1   4 2
No Yes Pyrococcus horikoshii OT3   4 2
No Yes Pyrococcus abyssi GE5   2 1
No Yes Pyrococcus furiosus COM1   4 2
No Yes Thermoplasmatales archaeon BRNA1   2 1
No Yes Thermoplasma volcanium GSS1   6 3
No Yes Thermoplasma acidophilum DSM 1728   6 3
No Yes Picrophilus torridus DSM 9790   4 2
No Yes Salinarchaeum sp. Harcht-Bsk1   11 6
No Yes Halopiger xanaduensis SH-6   19 10
No Yes Haloterrigena turkmenica DSM 5511   13 7
No Yes Natrinema sp. J7-2   20 11
No Yes Natrialba magadii ATCC 43099   15 8
No Yes Halorubrum lacusprofundi ATCC 49239   19 10
No Yes Haloquadratum walsbyi DSM 16790   17 9
No Yes Halogeometricum borinquense DSM 11551   15 8
No Yes Haloferax mediterranei ATCC 33500   20 11
No Yes Haloferax volcanii DS2   22 12
No Yes Halomicrobium mukohataei DSM 12286   11 6
No Yes Halorhabdus utahensis DSM 12940   16 9
No Yes Natronomonas pharaonis DSM 2160   15 8
No Yes Haloarcula hispanica ATCC 33960   17 9
No Yes Haloarcula marismortui ATCC 43049   18 10
No Yes Halalkalicoccus jeotgali B3   14 8
No Yes Halobacterium salinarum R1   17 9
No Yes Halobacterium sp. NRC-1   15 8
No Yes Methanotorris igneus Kol 5   2 1
No Yes Methanocaldococcus sp. FS406-22   2 1
No Yes Methanocaldococcus fervens AG86   2 1
No Yes Methanocaldococcus vulcanius M7   2 1
No Yes methanocaldococcus infernus ME   2 1
No Yes Methanocaldococcus jannaschii DSM 2661   2 1
No Yes Methanothermococcus okinawensis IH1   2 1
No Yes Methanococcus aeolicus Nankai-3   2 1
No Yes Methanococcus maripaludis C5   2 1
No Yes Methanococcus voltae A3   2 1
No Yes Methanococcus vannielii SB   8 4
No Yes Methanothermus fervidus DSM 2088   2 1
No Yes Methanothermobacter marburgensis str. Marburg   2 1
No Yes Methanothermobacter thermautotrophicus str. Delta H   2 1
No Yes Methanosphaera stadtmanae DSM 3091   2 1
No Yes Methanobrevibacter sp. AbM4   2 1
No Yes Methanobrevibacter ruminantium M1   4 2
No Yes Methanobrevibacter smithii ATCC 35061   2 1
No Yes Complete genome sequence of Methanobacterium sp. Mb1   2 1
No Yes Aciduliprofundum sp. MAR08-339   4 2
No Yes Aciduliprofundum boonei T469   4 2
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 221 136
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 76 45
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 44 26
No Yes Ascaris suum Victoria/Ghent Pig roundworm 38 23
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 61 41
No Yes Cryptococcus neoformans var. grubii H99   23 14
No Yes Cryptococcus neoformans B-3501A   23 14
No Yes Cryptococcus neoformans JEC21   26 15
No Yes Paracoccidioides brasiliensis Pb01   20 12
No Yes Paracoccidioides brasiliensis Pb03   23 13
No Yes Coccidioides posadasii str. Silveira   23 13
No Yes Coccidioides immitis RMSCC 3703   19 10
No Yes Coccidioides immitis RMSCC 2394   23 13
No Yes Coccidioides immitis H538.4   19 12
No Yes Ajellomyces dermatitidis ER-3   24 14
No Yes Histoplasma capsulatum H143   23 14
No Yes Histoplasma capsulatum H88   24 15
No Yes Histoplasma capsulatum G186AR   24 14
No Yes Aspergillus fumigatus A1163   27 17
No Yes Candida albicans WO-1   25 16
No Yes Saccharomyces cerevisiae UC5   28 18
No Yes Saccharomyces cerevisiae PW5   27 17
No Yes Saccharomyces cerevisiae FL100   18 11
No Yes Saccharomyces cerevisiae CLIB324   12 7
No Yes Saccharomyces cerevisiae CBS7960   26 17
No Yes Saccharomyces cerevisiae YJM269   25 16
No Yes Saccharomyces cerevisiae T7   30 19
No Yes Saccharomyces cerevisiae FostersB   27 17
No Yes Saccharomyces cerevisiae FostersO   24 14
No Yes Saccharomyces cerevisiae VL3   25 17
No Yes Saccharomyces cerevisiae Vin13   27 19
No Yes Saccharomyces cerevisiae LalvinQA23   26 17
No Yes Saccharomyces cerevisiae AWRI796   25 15
No Yes Saccharomyces cerevisiae Sigma1278b   30 19
No Yes Saccharomyces cerevisiae W303   30 19
No Yes Saccharomyces cerevisiae JAY291   30 19
No Yes Saccharomyces cerevisiae AWRI1631   22 15
No Yes Saccharomyces cerevisiae YPS163   17 11
No Yes Saccharomyces cerevisiae M22   8 5
No Yes Saccharomyces cerevisiae T73   16 10
No Yes Saccharomyces cerevisiae CLIB215   22 13
No Yes Saccharomyces cerevisiae Y10   7 5
No Yes Saccharomyces cerevisiae YJM789   30 19
No Yes Saccharomyces cerevisiae YJM789   30 19
No Yes Saccharomyces cerevisiae RM11-1a   30 19
No Yes Saccharomyces cerevisiae RM11-1a   30 19
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 30 19
No Yes Schizosaccharomyces pombe 972h-   25 14
No Yes Batrachochytrium dendrobatidis JEL423   32 22
No Yes Batrachochytrium dendrobatidis JAM81   37 22
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 84 51
No Yes Hordeum vulgare 22 Domesticated barley 177 124
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 104 65
No Yes Trypanosoma brucei Lister 427 v4.1   16 14
No Yes Neospora caninum Nc-Liverpool 6.2   13 10
No Yes Plasmodium falciparum HB3   12 9
No Yes Plasmodium falciparum Dd2   9 7
No Yes Desulfotomaculum gibsoniae DSM 7213   1 1
No Yes Clostridium difficile BI1   1 1
No Yes Clostridium difficile R20291   1 1
No Yes Clostridium difficile CD196   1 1
No Yes Halobacteroides halobius DSM 5150   1 1
No Yes Exiguobacterium antarcticum B7   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5113   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   1 1
No Yes Bacillus amyloliquefaciens LFB112   1 1
No Yes Bacillus amyloliquefaciens CC178   1 1
No Yes Bacillus amyloliquefaciens Y2   1 1
No Yes Bacillus amyloliquefaciens IT-45   1 1
No Yes Bacillus amyloliquefaciens XH7   1 1
No Yes Bacillus amyloliquefaciens LL3   1 1
No Yes Bacillus amyloliquefaciens TA208   1 1
No Yes Bacillus amyloliquefaciens DSM 7   1 1
No Yes Bacillus subtilis PY79   1 1
No Yes Bacillus subtilis XF-1   1 1
No Yes Bacillus subtilis QB928   1 1
No Yes Bacillus subtilis BSn5   1 1
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   1 1
No Yes Bacillus subtilis subsp. subtilis str. BSP1   1 1
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   1 1
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   1 1
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   1 1
No Yes Bacillus subtilis subsp. spizizenii str. W23   1 1
No Yes Bacillus subtilis subsp. natto BEST195   1 1
No Yes Coxiella burnetii CbuK_Q154   1 1
No Yes Coxiella burnetii CbuG_Q212   1 1
No Yes Coxiella burnetii RSA 493   1 1
No Yes Pseudomonas putida DOT-T1E   1 1
No Yes Pseudomonas putida ND6   1 1
No Yes Pseudomonas putida KT2440   1 1
No Yes Pseudomonas aeruginosa SCV20265   1 1
No Yes Candidatus Nitrososphaera gargensis Ga9.2   22 11
No Yes Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1   20 10
No Yes Caldisphaera lagunensis DSM 15908   3 2
No Yes Aeropyrum camini SY1 = JCM 12091   4 2
No Yes Sulfolobus islandicus LAL14/1   4 2
No Yes Sulfolobus islandicus REY15A   4 2
No Yes Sulfolobus islandicus HVE10/4   4 2
No Yes Sulfolobus islandicus Y.G.57.14   4 2
No Yes Sulfolobus islandicus L.S.2.15   4 2
No Yes Sulfolobus islandicus M.16.27   4 2
No Yes Sulfolobus islandicus M.14.25   4 2
No Yes Sulfolobus islandicus M.16.4   4 2
No Yes Sulfolobus islandicus L.D.8.5   4 2
No Yes Sulfolobus solfataricus 98/2   4 2
No Yes Sulfolobus acidocaldarius SUSAZ   4 2
No Yes Sulfolobus acidocaldarius Ron12/I   4 2
No Yes Sulfolobus acidocaldarius N8   4 2
No Yes Methanomethylovorans hollandica DSM 15978   2 1
No Yes Methanolobus psychrophilus R15   2 1
No Yes Methanosarcina mazei Tuc01   2 1
No Yes Methanoregula formicica Methanoregula formicicum SMSP   2 1
No Yes Archaeoglobus sulfaticallidus PM70-1   2 1
No Yes Thermococcus sp. AM4   4 2
No Yes Thermococcus sp. CL1   4 2
No Yes Thermococcus litoralis DSM 5473   4 2
No Yes Pyrococcus sp. NA2   2 1
No Yes Pyrococcus furiosus DSM 3638   4 2
No Yes Candidatus Methanomethylophilus alvus Mx1201   3 2
No Yes Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1   2 1
No Yes Ferroplasma acidarmanus fer1   4 2
No Yes Halovivax ruber XH-70   11 6
No Yes Natrinema pellirubrum DSM 15624   29 15
No Yes Natronococcus occultus SP4   19 10
No Yes Natronobacterium gregoryi SP2   17 9
No Yes Haloquadratum walsbyi C23   17 9
No Yes Halorhabdus tiamatea SARL4B   17 9
No Yes Natronomonas moolapensis 8.8.11   17 9
No Yes Haloarcula hispanica N601   17 9
No Yes Methanococcus maripaludis X1   2 1
No Yes Methanococcus maripaludis C6   2 1
No Yes Methanococcus maripaludis C7   2 1
No Yes Methanococcus maripaludis S2   2 1
No Yes Methanobacterium sp. SWAN-1   2 1
No Yes Homo sapiens 75_37 (old version GRC) Human 263 175
No Yes Homo sapiens (NCBI version) Human 113 67
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 67 40
No Yes Heliconius numata (Incomplete)   18 12
No Yes Loa loa v3.3 (Request) Eye worm 35 22
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 33 23
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 29 18
No Yes Moniliophthora perniciosa FA553 (Genome survey)   11 9
No Yes Encephalitozoon intestinalis (endoparasite)   12 8
No Yes Encephalitozoon cuniculi (endoparasite)   13 9
No Yes Picea sitchensis (Incomplete) Sitka spruce 3 2
No Yes Lotus japonicus (Early assembly)   92 59
No Yes Malus x domestica (Duplicate) Apple 202 130
No Yes Ricinus communis (Early assembly) Castor bean 78 48
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   186 107
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 102 59
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 109 63
No Yes Phoenix dactylifera (Early draft) Date palm 63 37
No Yes Guillardia theta (nucleomorph)   6 3
No Yes Homo sapiens 69_37 Human 74 44
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 70 42
No Yes Gorilla gorilla 69_3.1 Western gorilla 78 47
No Yes Pongo abelii 69_2 Sumatran orangutan 73 44
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 69 41
No Yes Macaca mulatta 69_1 Rhesus monkey 71 46
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 79 47
No Yes Otolemur garnettii 69_3 Small-eared galago 78 44
No Yes Microcebus murinus 69_1 Gray mouse lemur 61 40
No Yes Rattus norvegicus 69_3.4 Norway rat 69 40
No Yes Mus musculus 69_38 House mouse 66 39
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 55 34
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 68 42
No Yes Cavia porcellus 69_3 Domestic guinea pig 76 47
No Yes Oryctolagus cuniculus 69_2 Rabbit 76 48
No Yes Ochotona princeps 69 American pika 58 34
No Yes Tupaia belangeri 69 Northern tree shrew 60 38
No Yes Sus scrofa 69_10.2 Pig 68 44
No Yes Bos taurus 69_3.1 Cattle 72 42
No Yes Vicugna pacos 69_1 Alpaca 43 24
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 64 37
No Yes Mustela putorius furo 69_1.0 Domestic ferret 68 38
No Yes Ailuropoda melanoleuca 69_1 Giant panda 68 40
No Yes Canis familiaris 69_3.1 Dog 77 44
No Yes Felis catus 69 Domestic cat 52 34
No Yes Equus caballus 69_2 Horse 63 37
No Yes Myotis lucifugus 69_2.0 Little brown bat 86 54
No Yes Pteropus vampyrus 69_1 Large flying fox 64 40
No Yes Sorex araneus 69_1 European shrew 55 37
No Yes Erinaceus europaeus 69 Western European hedgehog 49 30
No Yes Procavia capensis 69_1 Cape rock hyrax 63 39
No Yes Loxodonta africana 69_3 African savanna elephant 68 41
No Yes Echinops telfairi 69 Small Madagascar hedgehog 53 33
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 56 34
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 51 31
No Yes Macropus eugenii 69_1.0 Tammar wallaby 51 30
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 73 41
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 76 44
No Yes Ornithorhynchus anatinus 69_5 Platypus 63 37
No Yes Petromyzon marinus 69_7.0 Sea lamprey 33 20
No Yes Meleagris gallopavo 69_2 Turkey 56 36
No Yes Gallus gallus 69_2 Chicken 58 34
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 62 37
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 58 34
No Yes Anolis carolinensis 69_2.0 Green anole 61 37
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 91 56
No Yes Latimeria chalumnae 69_1 Coelacanth 74 43
No Yes Gadus morhua 69_1 Atlantic cod 80 46
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 85 53
No Yes Takifugu rubripes 69_4 Torafugu 98 58
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 83 52
No Yes Oryzias latipes 69_1 Japanese medaka 75 49
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 81 53
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 90 55
No Yes Danio rerio 69_9 Zebrafish 82 49
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 28 17
No Yes Ciona intestinalis 69 Vase tunicate 32 18
No Yes Drosophila melanogaster 69_5 Fruit fly 37 21
No Yes Caenorhabditis elegans 69_215 Roundworm 45 29
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 30 19
No Yes Arabidopsis thaliana 10 Thale cress 105 62
No Yes 1_050719N (meta-genome)   18 12
No Yes 1_Upper_euphotic (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   40 28
No Yes 2_Base_of_chrolophyll_max (meta-genome)   6 3
No Yes 3_050719R (meta-genome)   2 1
No Yes 3_Below_base_of_euphotic (meta-genome)   2 2
No Yes 4_050719Q (meta-genome)   2 1
No Yes 4_Deep_abyss (meta-genome)   2 1
No Yes 5_Below_upper_mesopelagic (meta-genome)   3 2
No Yes 7_Oxygen_minimum_layer (meta-genome)   4 2
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   2 2
No Yes Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome)   3 2
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   4 3
No Yes Bath Hot Springs, filamentous community (meta-genome)   21 14
No Yes Bath Hot Springs, planktonic community (meta-genome)   53 39
No Yes Core Eukaryotic Genes 458 (CEGMA)   12 6
No Yes Crater Hills (meta-genome)   3 2
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   2 2
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   1 1
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   12 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   45 29
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   17 10
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   20 16
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   2 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   17 14
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   25 20
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   7 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   2 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   4 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   54 36
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   36 27
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 (meta-genome)   5 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   14 11
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   48 37
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   35 27
No Yes Human Gut Community Subject 7 (meta-genome)   2 1
No Yes Human Gut Community Subject 8 (meta-genome)   2 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   6 6
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   64761 39145
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   22 16
No Yes Protozoadb 2010_08 (Protozoadb)   617 449
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   2 2
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   2 1
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   3 3
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   9 8
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   6 4
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   2 2
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   2 1
No Yes STRING v9.0.5 (STRING)   5676 3487
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   3 3
No Yes Uniprot 2018_03 genome   74787 45966
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   10 6
No Yes Global Ocean Sampling Expedition (GOS)   940 630
No Yes NCBI plasmid sequences (Plasmids)   68 36
No Yes NCBI viral sequences (Viral)   75 50
No Yes PDB chains (SCOP 1.75) (PDB)   69 37
No Yes Protein Data Bank (all PDB sequenc)   764 396
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1913 1888
No Yes TargetDB (Targets)   262 171
No Yes UniProt viral sequences (Viral)   57 33

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