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Cyclin family domain assignments
in
Saccharomyces cerevisiae YPS163

Assignment details

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Saccharomyces cerevisiae YPS163 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
YLR210W   8.72e-48   0.0001   199-335   2cch B:181-308  
  1.66e-31   0.01   340-455   1vin A:309-432  
 
Weak hits:
YAL040C   9.28e-23   0.014   1-100   1w98 B:88-227  
YDL155W   2.76e-48   0.00016   161-296   2cch B:181-308  
  2.15e-33   0.014   301-416   1vin A:309-432  
YGR108W   2.84e-43   0.00038   201-336   2cch B:181-308  
  1e-30   0.0049   340-457   1jsu B:310-432  
YGR109C   2.67e-45   0.00031   111-251   2cch B:181-308  
  7.88e-24   0.022   255-377   1jsu B:310-432  
YLR226W   3.54e-16   0.028   43-191   2ivx A:7-149  
YMR199W   8.66e-27   0.0063   33-192   2cch B:181-308  
YNL025C   3.1e-29   0.0073   7-25,61-177   2ivx A:7-149  
  8.59e-24   0.0087   178-305   2i53 A:158-267  
YNL289W   5.67e-25   0.0064   11-151   3blh B:151-259  
YOL001W   0.00102   0.037   76-170   2ivx A:7-149  
YPL256C   8.66e-27   0.01   24-185   2cch B:181-308  
YPR025C   4.61e-30   0.0021   51-69,103-209   1jkw A:11-161  
  8.93e-30   0.0095   213-296,326-368   1jkw A:162-287  

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Select to display   Genome       Domains   Proteins
No Yes ALL   32765 32765
No Yes Homo sapiens 76_38 Human 62 41
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 22 13
No Yes Gorilla gorilla 76_3.1 Western gorilla 19 12
No Yes Pongo abelii 76_2 Sumatran orangutan 23 14
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 25 15
No Yes Papio anubis 76 Olive baboon 23 14
No Yes Macaca mulatta 76_1 Rhesus monkey 28 18
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 35 20
No Yes Otolemur garnettii 76_3 Small-eared galago 22 14
No Yes Microcebus murinus 76_1 Gray mouse lemur 16 10
No Yes Rattus norvegicus 76_5.0 Norway rat 20 12
No Yes Mus musculus 76_38 House mouse 38 24
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 16 10
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 21 13
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 23 15
No Yes Cavia porcellus 76_3 Domestic guinea pig 21 13
No Yes Oryctolagus cuniculus 76_2 Rabbit 20 12
No Yes Ochotona princeps 76 American pika 11 6
No Yes Tupaia belangeri 76 Northern tree shrew 12 7
No Yes Sus scrofa 76_10.2 Pig 23 15
No Yes Bos taurus 76_3.1 Cattle 26 16
No Yes Ovis aries 76_3.1 Sheep 27 17
No Yes Vicugna pacos 76_1 Alpaca 18 11
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 19 11
No Yes Mustela putorius furo 76_1.0 Domestic ferret 21 13
No Yes Ailuropoda melanoleuca 76_1 Giant panda 21 13
No Yes Canis familiaris 76_3.1 Dog 28 18
No Yes Felis catus 76_6.2 Domestic cat 22 13
No Yes Equus caballus 76_2 Horse 20 12
No Yes Myotis lucifugus 76_2.0 Little brown bat 26 15
No Yes Pteropus vampyrus 76_1 Large flying fox 17 11
No Yes Sorex araneus 76_1 European shrew 18 12
No Yes Erinaceus europaeus 76 Western European hedgehog 16 10
No Yes Procavia capensis 76_1 Cape rock hyrax 16 10
No Yes Loxodonta africana 76_3 African savanna elephant 28 16
No Yes Echinops telfairi 76 Small Madagascar hedgehog 10 6
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 25 15
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 12 9
No Yes Macropus eugenii 76_1.0 Tammar wallaby 12 8
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 29 18
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 33 20
No Yes Ornithorhynchus anatinus 76_5 Platypus 25 15
No Yes Saccoglossus kowalevskii v3.0   34 21
No Yes Petromyzon marinus 76_7.0 Sea lamprey 13 8
No Yes Meleagris gallopavo 76_2 Turkey 18 10
No Yes Gallus gallus 76_4 Chicken 18 11
No Yes Anas platyrhynchos 76_1.0 Mallard 18 11
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 20 11
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 16 9
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 17 10
No Yes Anolis carolinensis 76_2.0 Green anole 20 12
No Yes Xenopus laevis African clawed frog 104 68
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 27 18
No Yes Latimeria chalumnae 76_1 Coelacanth 28 19
No Yes Lepisosteus oculatus 76 Spotted gar 26 17
No Yes Gadus morhua 76_1 Atlantic cod 25 16
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 24 16
No Yes Takifugu rubripes 76_4 Torafugu 67 42
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 40 26
No Yes Oryzias latipes 76_1 Japanese medaka 25 18
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 24 17
No Yes Poecilia formosa 76 Amazon molly 32 20
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 32 22
No Yes Astyanax mexicanus 76 Mexican tetra 30 20
No Yes Danio rerio 76_9 Zebrafish 38 26
No Yes Oikopleura dioica   9 6
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 18 15
No Yes Ciona intestinalis 76 Vase tunicate 11 8
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 12 9
No Yes Adineta vaga   19 17
No Yes Octopus bimaculoides 280   11 9
No Yes Crassostrea gigas 22 Pacific oyster 9 7
No Yes Lottia gigantea Owl limpet 10 6
No Yes Helobdella robusta   15 12
No Yes Capitella sp. I   12 9
No Yes Danaus plexippus OGS1.0 Monarch butterfly 11 8
No Yes Heliconius melpomene Postman butterfly 10 7
No Yes Bombyx mori Domestic silkworm 5 4
No Yes Nasonia vitripennis Jewel wasp 11 8
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 26 26
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 9 6
No Yes Linepithema humile v1.1 Argentine ant 11 8
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 11 8
No Yes Solenopsis invicta v.2.2.3 Red fire ant 10 8
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 10 7
No Yes Atta cephalotes v1.1   11 8
No Yes Camponotus floridanus v3.3 Florida carpenter ant 10 7
No Yes Lucilia cuprina Australian sheep blowfly 9 6
No Yes Drosophila grimshawi 1.3   9 6
No Yes Drosophila willistoni 1.3   10 7
No Yes Drosophila pseudoobscura 2.13   8 6
No Yes Drosophila persimilis 1.3   8 6
No Yes Drosophila suzukii   7 5
No Yes Drosophila yakuba 1.3   9 7
No Yes Drosophila simulans 1.3   8 6
No Yes Drosophila sechellia 1.3   8 6
No Yes Drosophila melanogaster 76_5 Fruit fly 20 16
No Yes Drosophila erecta 1.3   8 6
No Yes Drosophila ananassae 1.3   8 6
No Yes Drosophila virilis 1.2   9 6
No Yes Drosophila mojavensis 1.3   9 6
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 16 10
No Yes Culex pipiens quinquefasciatus Southern house mosquito 9 8
No Yes Anopheles darlingi 22 American malaria mosquito 6 5
No Yes Anopheles gambiae 49_3j African malaria mosquito 9 7
No Yes Tribolium castaneum 3.0 Red flour beetle 7 6
No Yes Pediculus humanus corporis (Early assembly) Human body louse 9 7
No Yes Acyrthosiphon pisum Pea aphid 7 5
No Yes Rhodnius prolixus 22   4 3
No Yes Daphnia pulex Common water flea 16 10
No Yes Strigamia maritima 22   17 10
No Yes Sarcoptes scabiei   9 7
No Yes Tetranychus urticae Two-spotted spider mite 9 7
No Yes Ixodes scapularis (Preliminary) Black-legged tick 7 6
No Yes Pristionchus pacificus   2 2
No Yes Meloidogyne incognita Southern root-knot nematode 5 5
No Yes Meloidogyne hapla   3 3
No Yes Onchocerca volvulus 22   4 3
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 4 3
No Yes Caenorhabditis japonica   2 2
No Yes Caenorhabditis brenneri   7 7
No Yes Caenorhabditis remanei   6 6
No Yes Caenorhabditis elegans 76_235 Roundworm 6 6
No Yes Caenorhabditis briggsae 2   4 4
No Yes Trichinella spiralis 22   4 3
No Yes Hymenolepis microstoma   2 1
No Yes Echinococcus multilocularis   3 2
No Yes Echinococcus granulosus   3 2
No Yes Taenia solium Pork tapeworm 3 2
No Yes Schistosoma mansoni   3 2
No Yes Mnemiopsis leidyi Sea walnut 5 5
No Yes Thelohanellus kitauei   1 1
No Yes Acropora digitifera v1.0   5 5
No Yes Nematostella vectensis 1.0 Starlet sea anemone 9 7
No Yes Hydra vulgaris   7 6
No Yes Amphimedon queenslandica   8 6
No Yes Trichoplax adhaerens   5 4
No Yes Proterospongia sp. ATCC 50818   2 2
No Yes Monosiga brevicollis   2 2
No Yes Sphaeroforma arctica JP610   2 2
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Mortierella verticillata NRRL 6337   1 1
No Yes Rhizomucor miehei CAU432   1 1
No Yes Malassezia globosa CBS 7966   2 2
No Yes Sporisorium reilianum 22   1 1
No Yes Ustilago maydis   1 1
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   1 1
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   1 1
No Yes Melampsora laricis-populina   1 1
No Yes Rhodotorula graminis WP1 v1.0   1 1
No Yes Sporobolomyces roseus IAM 13481   1 1
No Yes Microbotryum violaceum 22   1 1
No Yes Wallemia sebi v1.0   2 2
No Yes Hydnomerulius pinastri v2.0   1 1
No Yes Pisolithus tinctorius Marx 270 v1.0   1 1
No Yes Scleroderma citrinum Foug A v1.0   1 1
No Yes Coprinopsis cinerea okayama7 130 v3   1 1
No Yes Pleurotus ostreatus Oyster mushroom 1 1
No Yes Amanita muscaria Koide v1.0 Fly agaric 1 1
No Yes Laccaria bicolor S238N-H82   1 1
No Yes Agaricus bisporus var. bisporus   1 1
No Yes Stereum hirsutum FP-91666 SS1 v1.0   1 1
No Yes Gloeophyllum trabeumv1.0   1 1
No Yes Punctularia strigosozonata v1.0   1 1
No Yes Wolfiporia cocos MD-104 SS10 v1.0   1 1
No Yes Phanerochaete chrysosporium RP-78 2.1   1 1
No Yes Daldinia eschscholzii EC12 v1.0   1 1
No Yes Apiospora montagnei NRRL 25634 v1.0   2 2
No Yes Magnaporthe poae ATCC 64411 22   2 2
No Yes Magnaporthe grisea 70-15   1 1
No Yes Podospora anserina   2 2
No Yes Sporotrichum thermophile ATCC 42464   2 2
No Yes Thielavia terrestris NRRL 8126   2 2
No Yes Chaetomium globosum CBS 148.51   2 2
No Yes Neurospora tetrasperma   2 2
No Yes Neurospora discreta FGSC 8579   2 2
No Yes Neurospora crassa OR74A   2 2
No Yes Cryphonectria parasitica Chestnut blight fungus 1 1
No Yes Verticillium albo-atrum VaMs.102   1 1
No Yes Verticillium dahliae VdLs.17   1 1
No Yes Acremonium alcalophilumv 1.0   2 2
No Yes Glomerella graminicola 22   2 2
No Yes Fusarium graminearum   2 2
No Yes Nectria haematococca mpVI   2 2
No Yes Fusarium oxysporum f. sp. lycopersici 4286   2 2
No Yes Fusarium verticillioides 7600   2 2
No Yes Trichoderma asperellum CBS 433.97 v1.0   2 2
No Yes Trichoderma atroviride   2 2
No Yes Trichoderma citrinoviride v1.0   2 2
No Yes Trichoderma reesei 1.2   2 2
No Yes Trichoderma virens Gv29-8   2 2
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   2 2
No Yes Trichoderma harzianum CBS 226.95 v1.0   2 2
No Yes Amorphotheca resinae v1.0 Creosote fungus 2 2
No Yes Botrytis cinerea B05.10   2 2
No Yes Sclerotinia sclerotiorum   2 2
No Yes Blumeria graminis 22   2 2
No Yes Didymella exigua CBS 183.55 v1.0   2 2
No Yes Leptosphaeria maculans 22   2 2
No Yes Setosphaeria turcica v1.0   2 2
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   2 2
No Yes Cochliobolus victoriae FI3 v1.0   2 2
No Yes Cochliobolus carbonum 26-R-13 v1.0   2 2
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 2 2
No Yes Alternaria brassicicola   2 2
No Yes Cochliobolus lunatus m118 v2.0   2 2
No Yes Pyrenophora teres f. teres 22   2 2
No Yes Pyrenophora tritici-repentis   2 2
No Yes Stagonospora nodorum   1 1
No Yes Mycosphaerella graminicola IPO323   2 2
No Yes Zasmidium cellare ATCC 36951 v1.0   2 2
No Yes Dothistroma septosporum   2 2
No Yes Septoria musiva v1.0   2 2
No Yes Mycosphaerella fijiensis CIRAD86   2 2
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   2 2
No Yes Paracoccidioides brasiliensis Pb18   1 1
No Yes Coccidioides posadasii RMSCC 3488   2 2
No Yes Coccidioides immitis RS   2 2
No Yes Ajellomyces dermatitidis SLH14081   2 2
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Microsporum canis CBS 113480   2 2
No Yes Trichophyton equinum CBS 127.97   2 2
No Yes Trichophyton verrucosum HKI 0517   2 2
No Yes Arthroderma benhamiae CBS 112371   2 2
No Yes Trichophyton tonsurans CBS 112818   2 2
No Yes Trichophyton rubrum CBS 118892   2 2
No Yes Uncinocarpus reesii 1704   2 2
No Yes Aspergillus zonatus v1.0   2 2
No Yes Penicillium chrysogenum Wisconsin 54-1255   2 2
No Yes Penicillium chrysogenum v1.0   2 2
No Yes Aspergillus acidus v1.0   2 2
No Yes Aspergillus fumigatus Af293   2 2
No Yes Aspergillus brasiliensis v1.0   2 2
No Yes Aspergillus nidulans FGSC A4   2 2
No Yes Aspergillus sydowii v1.0   2 2
No Yes Aspergillus versicolor v1.0   2 2
No Yes Aspergillus glaucus   2 2
No Yes Aspergillus carbonarius ITEM 5010   2 2
No Yes Neosartorya fischeri NRRL 181   2 2
No Yes Aspergillus terreus NIH2624   2 2
No Yes Aspergillus tubingensis v1.0   2 2
No Yes Aspergillus wentii v1.0   2 2
No Yes Aspergillus oryzae RIB40   2 2
No Yes Aspergillus niger 22   2 2
No Yes Aspergillus niger ATCC 1015   2 2
No Yes Aspergillus flavus NRRL3357   2 2
No Yes Aspergillus clavatus NRRL 1   2 2
No Yes Penicillium marneffei ATCC 18224   3 3
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Dekkera bruxellensis CBS 2499 v2.0   1 1
No Yes Pichia membranifaciensv1.0   1 1
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   1 1
No Yes Candida dubliniensis CD36   2 2
No Yes Candida tropicalis MYA-3404   1 1
No Yes Candida parapsilosis   1 1
No Yes Candida albicans SC5314   2 2
No Yes Lodderomyces elongisporus NRRL YB-4239   2 2
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   1 1
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   1 1
No Yes Debaromyces hansenii   1 1
No Yes Wickerhamomyces anomalus   1 1
No Yes Yarrowia lipolytica CLIB122   2 2
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   2 2
No Yes Kluyveromyces waltii   1 1
No Yes Saccharomyces cerevisiae 76 Baker's yeast 1 1
No Yes Schizosaccharomyces cryophilus OY26 22   2 2
No Yes Schizosaccharomyces octosporus yFS286   2 2
No Yes Schizosaccharomyces japonicus yFS275   2 2
No Yes Schizosaccharomyces pombe Fission yeast 2 2
No Yes Allomyces macrogynus ATCC 38327   1 1
No Yes Selaginella moellendorffii   8 8
No Yes Pinus taeda Loblolly pine 5 5
No Yes Picea abies Norway spruce 5 5
No Yes Eucalyptus grandis v201 Rose gum 11 11
No Yes Theobroma cacao B97-61/B2 v1 Cacao 11 11
No Yes Gossypium raimondii v221   38 38
No Yes Citrus clementina v165   13 13
No Yes Citrus sinensis v154 Sweet orange 10 10
No Yes Thellungiella halophila v173   18 18
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 29 29
No Yes Capsella rubella v183   16 16
No Yes Arabidopsis lyrata Lyrate rockcress 16 16
No Yes Arabidopsis thaliana 10 Thale cress 17 17
No Yes Carica papaya Papaya 7 7
No Yes Medicago truncatula Barrel medic 18 18
No Yes Phaseolus vulgaris v186 French bean 16 16
No Yes Glycine max v109 Soybean 32 32
No Yes Cucumis sativus v122 Cucumber 15 15
No Yes Fragaria vesca Wild strawberry 13 13
No Yes Malus domestica v196 Apple 18 18
No Yes Prunus persica v139 Peach 10 10
No Yes Linum usitatissimum v200 Flax 18 18
No Yes Manihot esculenta v147 Cassava 15 15
No Yes Populus trichocarpa v156 Black cottonwood 17 17
No Yes Vitis vinifera Wine grape 8 8
No Yes Mimulus guttatus v140 Spotted monkey flower 10 10
No Yes Solanum lycopersicum v.2.3 Tomato 16 16
No Yes Solanum tuberosum Potato 15 15
No Yes Actinidia chinensis Hongyang   11 11
No Yes Aquilegia coerulea v195   12 12
No Yes Triticum urartu 22   7 7
No Yes Triticum aestivum 22 Bread wheat 17 17
No Yes Aegilops tauschii 22   6 6
No Yes Brachypodium distachyon Stiff brome 10 10
No Yes Oryza barthii 22 African wild rice 9 8
No Yes Oryza meridionalis 22   9 9
No Yes Oryza glumaepatula 22   8 8
No Yes Oryza glaberrima African rice 8 8
No Yes Oryza punctata 22   12 12
No Yes Oryza nivara 22   10 10
No Yes Oryza brachyantha 22 Malo sina 10 10
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 14 14
No Yes Oryza sativa v193 Rice 14 14
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 9 9
No Yes Panicum virgatum v202 Switchgrass 12 12
No Yes Setaria italica v164 Foxtail millet 9 9
No Yes Zea mays subsp. mays Maize 21 21
No Yes Zea mays v181 Maize 21 21
No Yes Sorghum bicolor Sorghum 10 10
No Yes Musa balbisiana Balbis banana 13 13
No Yes Musa acuminata 22 Wild Malaysian banana 15 15
No Yes Amborella trichopoda 22   4 4
No Yes Physcomitrella patens   12 12
No Yes Coccomyxa subellipsoidea sp. C-169 v2   2 2
No Yes Asterochloris sp. Cgr/DA1pho v1.0   2 2
No Yes Chlorella variabilis sp. NC64A   1 1
No Yes Chlorella vulgaris   2 2
No Yes Volvox carteri f. nagariensis   2 2
No Yes Volvox carteri v199   2 2
No Yes Chlamydomonas reinhardtii 4.0   2 2
No Yes Ostreococcus sp. RCC809   1 1
No Yes Ostreococcus lucimarinus CCE9901   1 1
No Yes Ostreococcus tauri   2 2
No Yes Bathycoccus prasinos   2 2
No Yes Micromonas sp. RCC299   2 2
No Yes Micromonas pusilla CCMP1545 v3.0   2 2
No Yes Cyanidioschyzon merolae strain 10D 22   2 2
No Yes Cyanidioschyzon merolae   2 2
No Yes Porphyridium purpureum 02_2012   2 2
No Yes Thecamonas trahens ATCC 50062   2 2
No Yes Bigelowiella natans CCMP2755 22   2 2
No Yes Cyanophora paradoxa   2 2
No Yes Leishmania mexicana 2.4   2 2
No Yes Leishmania major strain Friedlin   1 1
No Yes Leishmania infantum JPCM5 2.4   2 2
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Trypanosoma vivax   1 1
No Yes Trypanosoma cruzi strain CL Brener   1 1
No Yes Trypanosoma congolense 2.4   1 1
No Yes Trypanosoma brucei gambiense v4.1   1 1
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Ectocarpus siliculosus   3 3
No Yes Aureococcus anophagefferens   2 2
No Yes Pythium iwayamai DAOM BR242034 22   2 2
No Yes Pythium arrhenomanes ATCC 12531 22   2 2
No Yes Pythium ultimum v1.7-2   2 2
No Yes Pythium aphanidermatum DAOM BR444 22   3 3
No Yes Pythium irregulare DAOM BR486 22   2 2
No Yes Pythium vexans DAOM BR484 22   2 2
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 2 2
No Yes Phytophthora sojae 1.1   2 2
No Yes Phytophthora infestans T30-4   2 2
No Yes Phytophthora capsici   1 1
No Yes Hyaloperonospora arabidopsidis 22   1 1
No Yes Phaeodactylum tricornutumCCAP 1055/1   1 1
No Yes Fragilariopsis cylindrus   3 3
No Yes Thalassiosira pseudonana CCMP1335   2 2
No Yes Paramecium tetraurelia   13 13
No Yes Tetrahymena thermophila SB210 1   2 2
No Yes Symbiodinium minutum clade B1 v1.2   2 2
No Yes Naegleria gruberi   2 2
No Yes Guillardia theta CCMP2712 v1.0   3 3
No Yes Emiliania huxleyi CCMP1516   3 3
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 69 46
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 15 12
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 10 8
No Yes Ascaris suum Victoria/Ghent Pig roundworm 6 6
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 4 4
No Yes Paracoccidioides brasiliensis Pb01   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Coccidioides posadasii str. Silveira   2 2
No Yes Coccidioides immitis RMSCC 3703   1 1
No Yes Coccidioides immitis RMSCC 2394   2 2
No Yes Coccidioides immitis H538.4   1 1
No Yes Ajellomyces dermatitidis ER-3   2 2
No Yes Histoplasma capsulatum H143   2 2
No Yes Histoplasma capsulatum H88   2 2
No Yes Histoplasma capsulatum G186AR   2 2
No Yes Aspergillus fumigatus A1163   2 2
No Yes Candida albicans WO-1   2 2
No Yes Saccharomyces cerevisiae UC5   1 1
No Yes Saccharomyces cerevisiae PW5   1 1
No Yes Saccharomyces cerevisiae CBS7960   1 1
No Yes Saccharomyces cerevisiae YJM269   1 1
No Yes Saccharomyces cerevisiae T7   1 1
No Yes Saccharomyces cerevisiae FostersB   1 1
No Yes Saccharomyces cerevisiae FostersO   1 1
No Yes Saccharomyces cerevisiae VL3   1 1
No Yes Saccharomyces cerevisiae Vin13   1 1
No Yes Saccharomyces cerevisiae LalvinQA23   1 1
No Yes Saccharomyces cerevisiae AWRI796   1 1
No Yes Saccharomyces cerevisiae Sigma1278b   1 1
No Yes Saccharomyces cerevisiae W303   1 1
No Yes Saccharomyces cerevisiae JAY291   1 1
No Yes Saccharomyces cerevisiae AWRI1631   1 1
No Yes Saccharomyces cerevisiae YPS163   1 1
No Yes Saccharomyces cerevisiae T73   1 1
No Yes Saccharomyces cerevisiae CLIB215   1 1
No Yes Saccharomyces cerevisiae YJM789   1 1
No Yes Saccharomyces cerevisiae YJM789   1 1
No Yes Saccharomyces cerevisiae RM11-1a   1 1
No Yes Saccharomyces cerevisiae RM11-1a   1 1
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 1 1
No Yes Schizosaccharomyces pombe 972h-   2 2
No Yes Batrachochytrium dendrobatidis JEL423   1 1
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 10 10
No Yes Hordeum vulgare 22 Domesticated barley 11 11
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 7 7
No Yes Trypanosoma brucei Lister 427 v4.1   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 61 40
No Yes Homo sapiens (NCBI version) Human 30 17
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 20 12
No Yes Heliconius numata (Incomplete)   2 2
No Yes Loa loa v3.3 (Request) Eye worm 4 3
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 3 2
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 2 1
No Yes Lotus japonicus (Early assembly)   11 11
No Yes Malus x domestica (Duplicate) Apple 18 18
No Yes Ricinus communis (Early assembly) Castor bean 7 7
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   22 22
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 15 15
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 16 16
No Yes Phoenix dactylifera (Early draft) Date palm 8 8
No Yes Guillardia theta (nucleomorph)   1 1
No Yes Homo sapiens 69_37 Human 20 12
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 20 12
No Yes Gorilla gorilla 69_3.1 Western gorilla 18 11
No Yes Pongo abelii 69_2 Sumatran orangutan 21 13
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 20 12
No Yes Macaca mulatta 69_1 Rhesus monkey 19 12
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 22 12
No Yes Otolemur garnettii 69_3 Small-eared galago 22 14
No Yes Microcebus murinus 69_1 Gray mouse lemur 16 10
No Yes Rattus norvegicus 69_3.4 Norway rat 22 14
No Yes Mus musculus 69_38 House mouse 20 12
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 16 10
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 21 13
No Yes Cavia porcellus 69_3 Domestic guinea pig 21 13
No Yes Oryctolagus cuniculus 69_2 Rabbit 22 13
No Yes Ochotona princeps 69 American pika 11 6
No Yes Tupaia belangeri 69 Northern tree shrew 12 7
No Yes Sus scrofa 69_10.2 Pig 22 14
No Yes Bos taurus 69_3.1 Cattle 23 14
No Yes Vicugna pacos 69_1 Alpaca 18 11
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 19 11
No Yes Mustela putorius furo 69_1.0 Domestic ferret 21 13
No Yes Ailuropoda melanoleuca 69_1 Giant panda 19 12
No Yes Canis familiaris 69_3.1 Dog 23 15
No Yes Felis catus 69 Domestic cat 12 8
No Yes Equus caballus 69_2 Horse 20 12
No Yes Myotis lucifugus 69_2.0 Little brown bat 26 15
No Yes Pteropus vampyrus 69_1 Large flying fox 17 11
No Yes Sorex araneus 69_1 European shrew 18 12
No Yes Erinaceus europaeus 69 Western European hedgehog 16 10
No Yes Procavia capensis 69_1 Cape rock hyrax 16 10
No Yes Loxodonta africana 69_3 African savanna elephant 20 12
No Yes Echinops telfairi 69 Small Madagascar hedgehog 10 6
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 15 9
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 12 9
No Yes Macropus eugenii 69_1.0 Tammar wallaby 12 8
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 25 15
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 28 17
No Yes Ornithorhynchus anatinus 69_5 Platypus 20 12
No Yes Petromyzon marinus 69_7.0 Sea lamprey 11 7
No Yes Meleagris gallopavo 69_2 Turkey 16 9
No Yes Gallus gallus 69_2 Chicken 15 8
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 20 11
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 17 10
No Yes Anolis carolinensis 69_2.0 Green anole 20 12
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 24 16
No Yes Latimeria chalumnae 69_1 Coelacanth 23 16
No Yes Gadus morhua 69_1 Atlantic cod 23 14
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 24 16
No Yes Takifugu rubripes 69_4 Torafugu 33 22
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 29 19
No Yes Oryzias latipes 69_1 Japanese medaka 21 15
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 23 16
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 26 18
No Yes Danio rerio 69_9 Zebrafish 26 18
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 10 8
No Yes Ciona intestinalis 69 Vase tunicate 11 8
No Yes Drosophila melanogaster 69_5 Fruit fly 8 6
No Yes Caenorhabditis elegans 69_215 Roundworm 2 2
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 1 1
No Yes Arabidopsis thaliana 10 Thale cress 16 16
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   12896 8925
No Yes Protozoadb 2010_08 (Protozoadb)   8 8
No Yes STRING v9.0.5 (STRING)   930 678
No Yes Uniprot 2018_03 genome   9402 7345
No Yes Global Ocean Sampling Expedition (GOS)   7 7
No Yes NCBI viral sequences (Viral)   8 4
No Yes PDB chains (SCOP 1.75) (PDB)   48 25
No Yes Protein Data Bank (all PDB sequenc)   552 285
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1611 1611
No Yes TargetDB (Targets)   33 24
No Yes UniProt viral sequences (Viral)   24 12

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