SUPERFAMILY 1.75 HMM library and genome assignments server

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DBL homology domain (DH-domain) family domain assignments
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Saccharomyces cerevisiae YPS163


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Select to display   Genome       Domains   Proteins
No Yes ALL   62611 62611
No Yes Homo sapiens 76_38 Human 178 173
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 37 36
No Yes Gorilla gorilla 76_3.1 Western gorilla 59 57
No Yes Pongo abelii 76_2 Sumatran orangutan 43 41
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 40 38
No Yes Papio anubis 76 Olive baboon 45 44
No Yes Macaca mulatta 76_1 Rhesus monkey 69 69
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 123 121
No Yes Otolemur garnettii 76_3 Small-eared galago 40 38
No Yes Microcebus murinus 76_1 Gray mouse lemur 33 31
No Yes Rattus norvegicus 76_5.0 Norway rat 47 44
No Yes Mus musculus 76_38 House mouse 132 129
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 30 29
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 37 36
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 39 37
No Yes Cavia porcellus 76_3 Domestic guinea pig 40 38
No Yes Oryctolagus cuniculus 76_2 Rabbit 38 36
No Yes Ochotona princeps 76 American pika 31 29
No Yes Tupaia belangeri 76 Northern tree shrew 26 25
No Yes Sus scrofa 76_10.2 Pig 48 48
No Yes Bos taurus 76_3.1 Cattle 47 45
No Yes Ovis aries 76_3.1 Sheep 48 46
No Yes Vicugna pacos 76_1 Alpaca 22 21
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 39 37
No Yes Mustela putorius furo 76_1.0 Domestic ferret 40 38
No Yes Ailuropoda melanoleuca 76_1 Giant panda 54 53
No Yes Canis familiaris 76_3.1 Dog 69 66
No Yes Felis catus 76_6.2 Domestic cat 38 37
No Yes Equus caballus 76_2 Horse 63 60
No Yes Myotis lucifugus 76_2.0 Little brown bat 39 37
No Yes Pteropus vampyrus 76_1 Large flying fox 35 33
No Yes Sorex araneus 76_1 European shrew 19 19
No Yes Erinaceus europaeus 76 Western European hedgehog 20 19
No Yes Procavia capensis 76_1 Cape rock hyrax 30 29
No Yes Loxodonta africana 76_3 African savanna elephant 61 58
No Yes Echinops telfairi 76 Small Madagascar hedgehog 27 26
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 57 53
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 22 21
No Yes Macropus eugenii 76_1.0 Tammar wallaby 29 28
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 53 52
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 39 37
No Yes Ornithorhynchus anatinus 76_5 Platypus 40 39
No Yes Saccoglossus kowalevskii v3.0   26 26
No Yes Petromyzon marinus 76_7.0 Sea lamprey 18 18
No Yes Meleagris gallopavo 76_2 Turkey 40 38
No Yes Gallus gallus 76_4 Chicken 39 37
No Yes Anas platyrhynchos 76_1.0 Mallard 35 33
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 39 38
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 39 37
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 49 46
No Yes Anolis carolinensis 76_2.0 Green anole 35 34
No Yes Xenopus laevis African clawed frog 23 23
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 46 44
No Yes Latimeria chalumnae 76_1 Coelacanth 49 48
No Yes Lepisosteus oculatus 76 Spotted gar 55 51
No Yes Gadus morhua 76_1 Atlantic cod 58 56
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 80 76
No Yes Takifugu rubripes 76_4 Torafugu 238 226
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 64 60
No Yes Oryzias latipes 76_1 Japanese medaka 55 51
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 59 56
No Yes Poecilia formosa 76 Amazon molly 64 59
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 85 81
No Yes Astyanax mexicanus 76 Mexican tetra 56 54
No Yes Danio rerio 76_9 Zebrafish 98 94
No Yes Oikopleura dioica   5 5
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 22 22
No Yes Ciona intestinalis 76 Vase tunicate 9 9
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 17 16
No Yes Adineta vaga   26 26
No Yes Octopus bimaculoides 280   49 49
No Yes Crassostrea gigas 22 Pacific oyster 15 14
No Yes Lottia gigantea Owl limpet 13 12
No Yes Helobdella robusta   19 19
No Yes Capitella sp. I   13 12
No Yes Danaus plexippus OGS1.0 Monarch butterfly 11 11
No Yes Heliconius melpomene Postman butterfly 9 8
No Yes Bombyx mori Domestic silkworm 6 6
No Yes Nasonia vitripennis Jewel wasp 9 9
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 34 31
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 15 14
No Yes Linepithema humile v1.1 Argentine ant 14 14
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 15 15
No Yes Solenopsis invicta v.2.2.3 Red fire ant 11 11
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 13 13
No Yes Atta cephalotes v1.1   14 14
No Yes Camponotus floridanus v3.3 Florida carpenter ant 17 17
No Yes Lucilia cuprina Australian sheep blowfly 11 10
No Yes Drosophila grimshawi 1.3   13 12
No Yes Drosophila willistoni 1.3   13 12
No Yes Drosophila pseudoobscura 2.13   13 12
No Yes Drosophila persimilis 1.3   11 11
No Yes Drosophila suzukii   12 12
No Yes Drosophila yakuba 1.3   13 13
No Yes Drosophila simulans 1.3   9 9
No Yes Drosophila sechellia 1.3   12 12
No Yes Drosophila melanogaster 76_5 Fruit fly 55 53
No Yes Drosophila erecta 1.3   13 13
No Yes Drosophila ananassae 1.3   12 11
No Yes Drosophila virilis 1.2   13 13
No Yes Drosophila mojavensis 1.3   13 12
No Yes Megaselia scalaris 22   4 4
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 14 14
No Yes Culex pipiens quinquefasciatus Southern house mosquito 10 10
No Yes Anopheles darlingi 22 American malaria mosquito 9 9
No Yes Anopheles gambiae 49_3j African malaria mosquito 18 17
No Yes Tribolium castaneum 3.0 Red flour beetle 15 14
No Yes Pediculus humanus corporis (Early assembly) Human body louse 12 11
No Yes Acyrthosiphon pisum Pea aphid 10 10
No Yes Rhodnius prolixus 22   9 9
No Yes Daphnia pulex Common water flea 15 15
No Yes Strigamia maritima 22   13 12
No Yes Sarcoptes scabiei   7 7
No Yes Tetranychus urticae Two-spotted spider mite 10 10
No Yes Ixodes scapularis (Preliminary) Black-legged tick 10 10
No Yes Pristionchus pacificus   6 6
No Yes Meloidogyne incognita Southern root-knot nematode 4 4
No Yes Meloidogyne hapla   2 2
No Yes Onchocerca volvulus 22   8 8
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 12 12
No Yes Caenorhabditis japonica   5 5
No Yes Caenorhabditis brenneri   6 6
No Yes Caenorhabditis remanei   5 4
No Yes Caenorhabditis elegans 76_235 Roundworm 21 19
No Yes Caenorhabditis briggsae 2   6 6
No Yes Trichinella spiralis 22   8 8
No Yes Hymenolepis microstoma   3 3
No Yes Echinococcus multilocularis   3 3
No Yes Echinococcus granulosus   3 3
No Yes Taenia solium Pork tapeworm 3 3
No Yes Schistosoma mansoni   2 2
No Yes Mnemiopsis leidyi Sea walnut 3 3
No Yes Acropora digitifera v1.0   13 13
No Yes Nematostella vectensis 1.0 Starlet sea anemone 17 17
No Yes Hydra vulgaris   13 12
No Yes Amphimedon queenslandica   16 16
No Yes Trichoplax adhaerens   9 8
No Yes Proterospongia sp. ATCC 50818   8 8
No Yes Monosiga brevicollis   7 7
No Yes Capsaspora owczarzaki ATCC 30864   16 16
No Yes Conidiobolus coronatus NRRL28638 v1.0   8 8
No Yes Mortierella verticillata NRRL 6337   5 5
No Yes Phycomyces blakesleeanus   9 9
No Yes Rhizopus oryzae RA 99-880   9 9
No Yes Mucor circinelloides   11 11
No Yes Rhizomucor miehei CAU432   10 10
No Yes Malassezia globosa CBS 7966   2 2
No Yes Sporisorium reilianum 22   2 2
No Yes Ustilago maydis   2 2
No Yes Mixia osmundae IAM 14324 v1.0   3 3
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   2 2
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   2 2
No Yes Melampsora laricis-populina   2 2
No Yes Rhodotorula graminis WP1 v1.0   2 2
No Yes Sporobolomyces roseus IAM 13481   2 2
No Yes Microbotryum violaceum 22   2 2
No Yes Wallemia sebi v1.0   2 2
No Yes Sphaerobolus stellatus v1.0   1 1
No Yes Piloderma croceum F 1598 v1.0   2 2
No Yes Serpula lacrymans var. lacrymans S7.9   2 2
No Yes Coniophora puteana   2 2
No Yes Hydnomerulius pinastri v2.0   2 2
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   2 2
No Yes Pisolithus microcarpus 441 v1.0   5 5
No Yes Pisolithus tinctorius Marx 270 v1.0   2 2
No Yes Scleroderma citrinum Foug A v1.0   3 3
No Yes Coprinopsis cinerea okayama7 130 v3   2 2
No Yes Pleurotus ostreatus Oyster mushroom 2 2
No Yes Amanita thiersii Skay4041 v1.0   2 2
No Yes Amanita muscaria Koide v1.0 Fly agaric 2 2
No Yes Galerina marginata v1.0   2 2
No Yes Hebeloma cylindrosporum h7 v2.0   2 2
No Yes Laccaria bicolor S238N-H82   1 1
No Yes Agaricus bisporus var. bisporus   2 2
No Yes Schizophyllum commune   2 2
No Yes Stereum hirsutum FP-91666 SS1 v1.0   2 2
No Yes Heterobasidion annosum   1 1
No Yes Gloeophyllum trabeumv1.0   2 2
No Yes Punctularia strigosozonata v1.0   2 2
No Yes Sebacina vermifera MAFF 305830 v1.0   2 2
No Yes Fomitiporia mediterranea v1.0   2 2
No Yes Tulasnella calospora AL13/4D v1.0   2 2
No Yes Postia placenta   2 2
No Yes Wolfiporia cocos MD-104 SS10 v1.0   2 2
No Yes Fomitopsis pinicolav1.0   2 2
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   2 2
No Yes Phanerochaete chrysosporium RP-78 2.1   2 2
No Yes Dichomitus squalens   2 2
No Yes Trametes versicolor v1.0   2 2
No Yes Tremella mesenterica Witches' butter 2 2
No Yes Podospora anserina   1 1
No Yes Sporotrichum thermophile ATCC 42464   1 1
No Yes Thielavia terrestris NRRL 8126   1 1
No Yes Chaetomium globosum CBS 148.51   1 1
No Yes Cryphonectria parasitica Chestnut blight fungus 1 1
No Yes Acremonium alcalophilumv 1.0   1 1
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Leptosphaeria maculans 22   1 1
No Yes Setosphaeria turcica v1.0   1 1
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   1 1
No Yes Cochliobolus victoriae FI3 v1.0   1 1
No Yes Cochliobolus carbonum 26-R-13 v1.0   1 1
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 1 1
No Yes Alternaria brassicicola   1 1
No Yes Cochliobolus lunatus m118 v2.0   1 1
No Yes Pyrenophora teres f. teres 22   1 1
No Yes Pyrenophora tritici-repentis   1 1
No Yes Stagonospora nodorum   1 1
No Yes Mycosphaerella graminicola IPO323   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Dothistroma septosporum   1 1
No Yes Septoria musiva v1.0   1 1
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   1 1
No Yes Paracoccidioides brasiliensis Pb18   1 1
No Yes Coccidioides posadasii RMSCC 3488   1 1
No Yes Coccidioides immitis RS   1 1
No Yes Ajellomyces dermatitidis SLH14081   1 1
No Yes Microsporum canis CBS 113480   1 1
No Yes Trichophyton equinum CBS 127.97   1 1
No Yes Trichophyton verrucosum HKI 0517   1 1
No Yes Arthroderma benhamiae CBS 112371   1 1
No Yes Trichophyton tonsurans CBS 112818   1 1
No Yes Trichophyton rubrum CBS 118892   1 1
No Yes Uncinocarpus reesii 1704   1 1
No Yes Aspergillus zonatus v1.0   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus fumigatus Af293   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus nidulans FGSC A4   1 1
No Yes Aspergillus sydowii v1.0   1 1
No Yes Aspergillus versicolor v1.0   1 1
No Yes Aspergillus glaucus   1 1
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Neosartorya fischeri NRRL 181   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus wentii v1.0   1 1
No Yes Aspergillus oryzae RIB40   1 1
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Aspergillus clavatus NRRL 1   1 1
No Yes Penicillium marneffei ATCC 18224   1 1
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Hansenula polymorpha v2.0   1 1
No Yes Lodderomyces elongisporus NRRL YB-4239   1 1
No Yes Candida guilliermondii ATCC 6260   1 1
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   2 2
No Yes Yarrowia lipolytica CLIB122   1 1
No Yes Candida lusitaniae ATCC 42720   2 2
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   1 1
No Yes Schizosaccharomyces cryophilus OY26 22   2 2
No Yes Schizosaccharomyces octosporus yFS286   1 1
No Yes Schizosaccharomyces japonicus yFS275   2 2
No Yes Schizosaccharomyces pombe Fission yeast 2 2
No Yes Catenaria anguillulae PL171 v1.0   4 4
No Yes Allomyces macrogynus ATCC 38327   10 10
No Yes Spizellomyces punctatus DAOM BR117   7 7
No Yes Dictyostelium discoideum   11 11
No Yes Dictyostelium purpureum   10 10
No Yes Thecamonas trahens ATCC 50062   2 2
No Yes Ectocarpus siliculosus   1 1
No Yes Pythium ultimum v1.7-2   1 1
No Yes Naegleria gruberi   2 2
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 49 47
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 46 44
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 19 18
No Yes Ascaris suum Victoria/Ghent Pig roundworm 6 5
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 15 13
No Yes Cryptococcus neoformans var. grubii H99   2 2
No Yes Cryptococcus neoformans B-3501A   2 2
No Yes Cryptococcus neoformans JEC21   2 2
No Yes Paracoccidioides brasiliensis Pb01   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Coccidioides posadasii str. Silveira   1 1
No Yes Ajellomyces dermatitidis ER-3   1 1
No Yes Histoplasma capsulatum H143   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Aspergillus fumigatus A1163   1 1
No Yes Schizosaccharomyces pombe 972h-   2 2
No Yes Batrachochytrium dendrobatidis JEL423   5 5
No Yes Batrachochytrium dendrobatidis JAM81   4 4
No Yes Homo sapiens 75_37 (old version GRC) Human 204 198
No Yes Homo sapiens (NCBI version) Human 84 82
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 40 38
No Yes Loa loa v3.3 (Request) Eye worm 10 10
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 7 7
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 8 8
No Yes Homo sapiens 69_37 Human 42 40
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 35 34
No Yes Gorilla gorilla 69_3.1 Western gorilla 40 38
No Yes Pongo abelii 69_2 Sumatran orangutan 38 36
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 36 34
No Yes Macaca mulatta 69_1 Rhesus monkey 34 34
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 40 39
No Yes Otolemur garnettii 69_3 Small-eared galago 39 37
No Yes Microcebus murinus 69_1 Gray mouse lemur 33 31
No Yes Rattus norvegicus 69_3.4 Norway rat 36 34
No Yes Mus musculus 69_38 House mouse 40 38
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 30 29
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 30 29
No Yes Cavia porcellus 69_3 Domestic guinea pig 38 36
No Yes Oryctolagus cuniculus 69_2 Rabbit 36 34
No Yes Ochotona princeps 69 American pika 31 29
No Yes Tupaia belangeri 69 Northern tree shrew 26 25
No Yes Sus scrofa 69_10.2 Pig 40 40
No Yes Bos taurus 69_3.1 Cattle 42 40
No Yes Vicugna pacos 69_1 Alpaca 22 21
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 39 37
No Yes Mustela putorius furo 69_1.0 Domestic ferret 40 38
No Yes Ailuropoda melanoleuca 69_1 Giant panda 42 41
No Yes Canis familiaris 69_3.1 Dog 44 42
No Yes Felis catus 69 Domestic cat 29 27
No Yes Equus caballus 69_2 Horse 39 37
No Yes Myotis lucifugus 69_2.0 Little brown bat 36 34
No Yes Pteropus vampyrus 69_1 Large flying fox 35 33
No Yes Sorex araneus 69_1 European shrew 19 19
No Yes Erinaceus europaeus 69 Western European hedgehog 20 19
No Yes Procavia capensis 69_1 Cape rock hyrax 30 29
No Yes Loxodonta africana 69_3 African savanna elephant 39 37
No Yes Echinops telfairi 69 Small Madagascar hedgehog 27 26
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 23 22
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 22 21
No Yes Macropus eugenii 69_1.0 Tammar wallaby 29 28
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 39 38
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 39 37
No Yes Ornithorhynchus anatinus 69_5 Platypus 34 33
No Yes Petromyzon marinus 69_7.0 Sea lamprey 16 16
No Yes Meleagris gallopavo 69_2 Turkey 34 32
No Yes Gallus gallus 69_2 Chicken 34 32
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 39 38
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 35 33
No Yes Anolis carolinensis 69_2.0 Green anole 35 34
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 36 35
No Yes Latimeria chalumnae 69_1 Coelacanth 42 41
No Yes Gadus morhua 69_1 Atlantic cod 51 49
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 58 55
No Yes Takifugu rubripes 69_4 Torafugu 55 51
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 54 50
No Yes Oryzias latipes 69_1 Japanese medaka 43 39
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 58 55
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 62 58
No Yes Danio rerio 69_9 Zebrafish 57 54
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 10 10
No Yes Ciona intestinalis 69 Vase tunicate 8 8
No Yes Drosophila melanogaster 69_5 Fruit fly 13 12
No Yes Caenorhabditis elegans 69_215 Roundworm 5 4
No Yes NCBI 2017_08 genome   33995 32289
No Yes STRING v9.0.5 (STRING)   1302 1244
No Yes Uniprot 2018_03 genome   15876 15301
No Yes PDB chains (SCOP 1.75) (PDB)   16 16
No Yes Protein Data Bank (all PDB sequenc)   91 91
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   206 206
No Yes TargetDB (Targets)   60 59

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