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GTPase activation domain, GAP superfamily domain assignments
in
Linum usitatissimum v200

Assignment details

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Linum usitatissimum v200 has 14 significant domains in 14 proteins.

     

Sequence ID   Evalue   Region   Family  
Lus10004864|PACid:23157177   3.34e-18   171-272   BCR-homology GTPase activation domain (BH-domain)  
Lus10005733|PACid:23175257   1.37e-22   140-304   BCR-homology GTPase activation domain (BH-domain)  
Lus10005998|PACid:23175061   6.87e-38   167-346   BCR-homology GTPase activation domain (BH-domain)  
Lus10009778|PACid:23175357   1.73e-36   131-310   BCR-homology GTPase activation domain (BH-domain)  
Lus10014213|PACid:23152888   8.44e-39   144-323   BCR-homology GTPase activation domain (BH-domain)  
Lus10020625|PACid:23172357   8.24e-30   124-265   BCR-homology GTPase activation domain (BH-domain)  
Lus10022700|PACid:23178505   3.73e-39   143-322   BCR-homology GTPase activation domain (BH-domain)  
Lus10024768|PACid:23159548   6.08e-37   126-305   BCR-homology GTPase activation domain (BH-domain)  
Lus10030213|PACid:23153150   1.04e-37   186-365   BCR-homology GTPase activation domain (BH-domain)  
Lus10032491|PACid:23146406   6.75e-32   134-274,304-325   BCR-homology GTPase activation domain (BH-domain)  
Lus10036047|PACid:23141276   0.000000194   2-79   BCR-homology GTPase activation domain (BH-domain)  
Lus10036048|PACid:23141036   1.67e-19   127-237   BCR-homology GTPase activation domain (BH-domain)  
Lus10036167|PACid:23141077   3.73e-30   213-404   BCR-homology GTPase activation domain (BH-domain)  
Lus10042986|PACid:23167987   2.16e-31   134-287   BCR-homology GTPase activation domain (BH-domain)  
 
Weak hits:
Lus10002206|PACid:23180531   0.0589   168-224   BCR-homology GTPase activation domain (BH-domain)  
Lus10009470|PACid:23149693   0.0022   47-99   BCR-homology GTPase activation domain (BH-domain)  
Lus10012238|PACid:23172667   0.053   168-224   BCR-homology GTPase activation domain (BH-domain)  
Lus10017773|PACid:23176350   0.0518   84-135   BCR-homology GTPase activation domain (BH-domain)  
Lus10022084|PACid:23160297   0.011   280-350   BCR-homology GTPase activation domain (BH-domain)  
Lus10034527|PACid:23162886   0.000706   22-71   BCR-homology GTPase activation domain (BH-domain)  
Lus10034969|PACid:23181428   0.000777   51-103   BCR-homology GTPase activation domain (BH-domain)  

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Select to display   Genome       Domains   Proteins
No Yes ALL   78088 78088
No Yes Homo sapiens 76_38 Human 390 390
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 86 86
No Yes Gorilla gorilla 76_3.1 Western gorilla 134 134
No Yes Pongo abelii 76_2 Sumatran orangutan 97 97
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 95 95
No Yes Papio anubis 76 Olive baboon 101 101
No Yes Macaca mulatta 76_1 Rhesus monkey 176 176
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 221 221
No Yes Otolemur garnettii 76_3 Small-eared galago 89 89
No Yes Microcebus murinus 76_1 Gray mouse lemur 88 79
No Yes Rattus norvegicus 76_5.0 Norway rat 153 127
No Yes Mus musculus 76_38 House mouse 226 225
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 80 80
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 86 82
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 89 88
No Yes Cavia porcellus 76_3 Domestic guinea pig 87 87
No Yes Oryctolagus cuniculus 76_2 Rabbit 102 95
No Yes Ochotona princeps 76 American pika 84 78
No Yes Tupaia belangeri 76 Northern tree shrew 78 73
No Yes Sus scrofa 76_10.2 Pig 119 119
No Yes Bos taurus 76_3.1 Cattle 100 97
No Yes Ovis aries 76_3.1 Sheep 104 104
No Yes Vicugna pacos 76_1 Alpaca 58 56
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 88 86
No Yes Mustela putorius furo 76_1.0 Domestic ferret 88 88
No Yes Ailuropoda melanoleuca 76_1 Giant panda 95 94
No Yes Canis familiaris 76_3.1 Dog 130 128
No Yes Felis catus 76_6.2 Domestic cat 93 93
No Yes Equus caballus 76_2 Horse 112 112
No Yes Myotis lucifugus 76_2.0 Little brown bat 91 91
No Yes Pteropus vampyrus 76_1 Large flying fox 92 90
No Yes Sorex araneus 76_1 European shrew 75 68
No Yes Erinaceus europaeus 76 Western European hedgehog 72 70
No Yes Procavia capensis 76_1 Cape rock hyrax 92 88
No Yes Loxodonta africana 76_3 African savanna elephant 149 148
No Yes Echinops telfairi 76 Small Madagascar hedgehog 81 76
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 105 104
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 56 54
No Yes Macropus eugenii 76_1.0 Tammar wallaby 94 85
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 111 111
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 94 94
No Yes Ornithorhynchus anatinus 76_5 Platypus 95 95
No Yes Saccoglossus kowalevskii v3.0   64 64
No Yes Petromyzon marinus 76_7.0 Sea lamprey 42 42
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 91 91
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 87 86
No Yes Meleagris gallopavo 76_2 Turkey 94 94
No Yes Gallus gallus 76_4 Chicken 96 95
No Yes Anas platyrhynchos 76_1.0 Mallard 91 91
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 99 99
No Yes Anolis carolinensis 76_2.0 Green anole 89 89
No Yes Xenopus laevis African clawed frog 115 115
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 110 110
No Yes Latimeria chalumnae 76_1 Coelacanth 108 108
No Yes Lepisosteus oculatus 76 Spotted gar 135 135
No Yes Gadus morhua 76_1 Atlantic cod 124 120
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 156 156
No Yes Takifugu rubripes 76_4 Torafugu 456 456
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 130 130
No Yes Oryzias latipes 76_1 Japanese medaka 128 128
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 122 121
No Yes Poecilia formosa 76 Amazon molly 126 126
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 172 172
No Yes Astyanax mexicanus 76 Mexican tetra 126 126
No Yes Danio rerio 76_9 Zebrafish 205 205
No Yes Oikopleura dioica   32 32
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 68 68
No Yes Ciona intestinalis 76 Vase tunicate 37 37
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 69 61
No Yes Adineta vaga   72 72
No Yes Octopus bimaculoides 280   58 58
No Yes Crassostrea gigas 22 Pacific oyster 33 33
No Yes Lottia gigantea Owl limpet 37 36
No Yes Helobdella robusta   64 63
No Yes Capitella sp. I   40 40
No Yes Danaus plexippus OGS1.0 Monarch butterfly 37 35
No Yes Heliconius melpomene Postman butterfly 30 30
No Yes Bombyx mori Domestic silkworm 31 30
No Yes Nasonia vitripennis Jewel wasp 26 26
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 81 81
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 32 32
No Yes Linepithema humile v1.1 Argentine ant 37 37
No Yes Solenopsis invicta v.2.2.3 Red fire ant 31 30
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 33 33
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 32 32
No Yes Atta cephalotes v1.1   31 31
No Yes Camponotus floridanus v3.3 Florida carpenter ant 31 31
No Yes Lucilia cuprina Australian sheep blowfly 29 29
No Yes Drosophila grimshawi 1.3   29 29
No Yes Drosophila willistoni 1.3   29 29
No Yes Drosophila pseudoobscura 2.13   29 29
No Yes Drosophila persimilis 1.3   28 28
No Yes Drosophila suzukii   33 30
No Yes Drosophila yakuba 1.3   28 28
No Yes Drosophila simulans 1.3   25 25
No Yes Drosophila sechellia 1.3   28 28
No Yes Drosophila melanogaster 76_5 Fruit fly 100 100
No Yes Drosophila erecta 1.3   28 28
No Yes Drosophila ananassae 1.3   28 28
No Yes Drosophila virilis 1.2   28 28
No Yes Drosophila mojavensis 1.3   28 28
No Yes Megaselia scalaris 22   18 17
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 33 33
No Yes Culex pipiens quinquefasciatus Southern house mosquito 36 36
No Yes Anopheles darlingi 22 American malaria mosquito 23 23
No Yes Anopheles gambiae 49_3j African malaria mosquito 29 29
No Yes Tribolium castaneum 3.0 Red flour beetle 32 31
No Yes Pediculus humanus corporis (Early assembly) Human body louse 34 34
No Yes Rhodnius prolixus 22   31 31
No Yes Acyrthosiphon pisum Pea aphid 28 28
No Yes Daphnia pulex Common water flea 51 51
No Yes Strigamia maritima 22   32 32
No Yes Sarcoptes scabiei   31 31
No Yes Tetranychus urticae Two-spotted spider mite 31 31
No Yes Ixodes scapularis (Preliminary) Black-legged tick 39 38
No Yes Pristionchus pacificus   30 30
No Yes Meloidogyne incognita Southern root-knot nematode 23 23
No Yes Meloidogyne hapla   19 19
No Yes Onchocerca volvulus 22   28 28
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 40 40
No Yes Caenorhabditis japonica   26 26
No Yes Caenorhabditis brenneri   35 35
No Yes Caenorhabditis remanei   37 37
No Yes Caenorhabditis elegans 76_235 Roundworm 81 81
No Yes Caenorhabditis briggsae 2   30 30
No Yes Trichinella spiralis 22   34 34
No Yes Hymenolepis microstoma   37 36
No Yes Echinococcus multilocularis   36 36
No Yes Echinococcus granulosus   36 36
No Yes Taenia solium Pork tapeworm 36 36
No Yes Schistosoma mansoni   35 35
No Yes Mnemiopsis leidyi Sea walnut 33 32
No Yes Thelohanellus kitauei   13 13
No Yes Acropora digitifera v1.0   37 37
No Yes Nematostella vectensis 1.0 Starlet sea anemone 36 36
No Yes Hydra vulgaris   37 37
No Yes Amphimedon queenslandica   55 55
No Yes Trichoplax adhaerens   30 30
No Yes Proterospongia sp. ATCC 50818   42 42
No Yes Monosiga brevicollis   45 45
No Yes Sphaeroforma arctica JP610   21 21
No Yes Capsaspora owczarzaki ATCC 30864   54 52
No Yes Conidiobolus coronatus NRRL28638 v1.0   17 17
No Yes Malassezia globosa CBS 7966   24 24
No Yes Sporisorium reilianum 22   16 16
No Yes Ustilago maydis   15 15
No Yes Wallemia sebi v1.0   11 11
No Yes Mixia osmundae IAM 14324 v1.0   13 13
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   19 19
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   18 18
No Yes Melampsora laricis-populina   20 20
No Yes Rhodotorula graminis WP1 v1.0   16 16
No Yes Sporobolomyces roseus IAM 13481   16 16
No Yes Microbotryum violaceum 22   20 20
No Yes Sphaerobolus stellatus v1.0   18 18
No Yes Piloderma croceum F 1598 v1.0   18 18
No Yes Serpula lacrymans var. lacrymans S7.9   15 15
No Yes Coniophora puteana   17 17
No Yes Hydnomerulius pinastri v2.0   21 21
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   18 18
No Yes Pisolithus microcarpus 441 v1.0   18 18
No Yes Pisolithus tinctorius Marx 270 v1.0   18 18
No Yes Scleroderma citrinum Foug A v1.0   17 17
No Yes Coprinopsis cinerea okayama7 130 v3   20 20
No Yes Pleurotus ostreatus Oyster mushroom 17 17
No Yes Amanita thiersii Skay4041 v1.0   17 17
No Yes Amanita muscaria Koide v1.0 Fly agaric 17 17
No Yes Galerina marginata v1.0   19 19
No Yes Hebeloma cylindrosporum h7 v2.0   20 20
No Yes Laccaria bicolor S238N-H82   23 23
No Yes Agaricus bisporus var. bisporus   16 16
No Yes Schizophyllum commune   17 17
No Yes Stereum hirsutum FP-91666 SS1 v1.0   19 19
No Yes Heterobasidion annosum   17 17
No Yes Gloeophyllum trabeumv1.0   17 17
No Yes Punctularia strigosozonata v1.0   16 16
No Yes Phanerochaete chrysosporium RP-78 2.1   15 15
No Yes Sebacina vermifera MAFF 305830 v1.0   18 18
No Yes Fomitiporia mediterranea v1.0   19 19
No Yes Tulasnella calospora AL13/4D v1.0   21 21
No Yes Postia placenta   25 25
No Yes Wolfiporia cocos MD-104 SS10 v1.0   17 17
No Yes Fomitopsis pinicolav1.0   18 18
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   18 18
No Yes Trametes versicolor v1.0   18 18
No Yes Dichomitus squalens   17 17
No Yes Tremella mesenterica Witches' butter 15 15
No Yes Apiospora montagnei NRRL 25634 v1.0   13 13
No Yes Daldinia eschscholzii EC12 v1.0   13 13
No Yes Magnaporthe poae ATCC 64411 22   12 12
No Yes Magnaporthe grisea 70-15   12 12
No Yes Podospora anserina   14 14
No Yes Sporotrichum thermophile ATCC 42464   14 14
No Yes Thielavia terrestris NRRL 8126   13 13
No Yes Chaetomium globosum CBS 148.51   14 14
No Yes Neurospora tetrasperma   13 13
No Yes Neurospora discreta FGSC 8579   14 14
No Yes Neurospora crassa OR74A   14 14
No Yes Cryphonectria parasitica Chestnut blight fungus 12 12
No Yes Verticillium albo-atrum VaMs.102   12 12
No Yes Verticillium dahliae VdLs.17   11 11
No Yes Acremonium alcalophilumv 1.0   12 12
No Yes Glomerella graminicola 22   12 12
No Yes Fusarium graminearum   12 12
No Yes Nectria haematococca mpVI   13 13
No Yes Fusarium oxysporum f. sp. lycopersici 4286   13 13
No Yes Fusarium verticillioides 7600   11 11
No Yes Trichoderma asperellum CBS 433.97 v1.0   12 12
No Yes Trichoderma atroviride   12 12
No Yes Trichoderma citrinoviride v1.0   12 12
No Yes Trichoderma reesei 1.2   12 12
No Yes Trichoderma virens Gv29-8   12 12
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   12 12
No Yes Trichoderma harzianum CBS 226.95 v1.0   12 12
No Yes Amorphotheca resinae v1.0 Creosote fungus 12 12
No Yes Botrytis cinerea B05.10   12 12
No Yes Sclerotinia sclerotiorum   13 13
No Yes Blumeria graminis 22   13 13
No Yes Didymella exigua CBS 183.55 v1.0   11 11
No Yes Leptosphaeria maculans 22   12 12
No Yes Setosphaeria turcica v1.0   11 11
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   11 11
No Yes Cochliobolus victoriae FI3 v1.0   11 11
No Yes Cochliobolus carbonum 26-R-13 v1.0   11 11
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 9 9
No Yes Alternaria brassicicola   9 9
No Yes Cochliobolus lunatus m118 v2.0   10 10
No Yes Pyrenophora teres f. teres 22   11 11
No Yes Pyrenophora tritici-repentis   11 11
No Yes Stagonospora nodorum   12 12
No Yes Mycosphaerella graminicola IPO323   10 10
No Yes Zasmidium cellare ATCC 36951 v1.0   11 11
No Yes Septoria musiva v1.0   11 11
No Yes Mycosphaerella fijiensis CIRAD86   10 10
No Yes Dothistroma septosporum   11 11
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   11 11
No Yes Ajellomyces dermatitidis SLH14081   10 10
No Yes Histoplasma capsulatum class NAmI strain WU24   10 10
No Yes Microsporum canis CBS 113480   10 10
No Yes Arthroderma benhamiae CBS 112371   10 10
No Yes Trichophyton equinum CBS 127.97   10 10
No Yes Trichophyton verrucosum HKI 0517   10 10
No Yes Trichophyton tonsurans CBS 112818   10 10
No Yes Trichophyton rubrum CBS 118892   10 10
No Yes Paracoccidioides brasiliensis Pb18   10 10
No Yes Coccidioides posadasii RMSCC 3488   11 11
No Yes Coccidioides immitis RS   11 11
No Yes Uncinocarpus reesii 1704   11 11
No Yes Neosartorya fischeri NRRL 181   10 10
No Yes Penicillium chrysogenum Wisconsin 54-1255   11 11
No Yes Penicillium chrysogenum v1.0   10 10
No Yes Aspergillus acidus v1.0   10 10
No Yes Aspergillus fumigatus Af293   10 10
No Yes Aspergillus brasiliensis v1.0   10 10
No Yes Aspergillus nidulans FGSC A4   10 10
No Yes Aspergillus sydowii v1.0   10 10
No Yes Aspergillus versicolor v1.0   11 11
No Yes Aspergillus glaucus   11 11
No Yes Aspergillus zonatus v1.0   10 10
No Yes Aspergillus carbonarius ITEM 5010   10 10
No Yes Aspergillus terreus NIH2624   10 10
No Yes Aspergillus tubingensis v1.0   10 10
No Yes Aspergillus wentii v1.0   10 10
No Yes Aspergillus oryzae RIB40   10 10
No Yes Aspergillus niger 22   10 10
No Yes Aspergillus niger ATCC 1015   10 10
No Yes Aspergillus flavus NRRL3357   10 10
No Yes Aspergillus clavatus NRRL 1   10 10
No Yes Penicillium marneffei ATCC 18224   11 11
No Yes Tuber melanosporum Mel28 22   14 14
No Yes Tuber melanosporum Vittad Perigord truffle 14 14
No Yes Pichia membranifaciensv1.0   10 10
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   12 12
No Yes Pichia stipitis CBS 6054   12 12
No Yes Candida guilliermondii ATCC 6260   13 13
No Yes Lodderomyces elongisporus NRRL YB-4239   13 13
No Yes Debaromyces hansenii   12 12
No Yes Hansenula polymorpha v2.0   9 9
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   12 12
No Yes Candida dubliniensis CD36   13 13
No Yes Candida tropicalis MYA-3404   12 12
No Yes Candida parapsilosis   11 11
No Yes Candida albicans SC5314   12 12
No Yes Wickerhamomyces anomalus   13 13
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   9 9
No Yes Yarrowia lipolytica CLIB122   16 16
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   13 13
No Yes Candida lusitaniae ATCC 42720   13 13
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   13 13
No Yes Pichia pastoris GS115   11 11
No Yes Vanderwaltozyma polyspora DSM 70294   15 15
No Yes Candida glabrata CBS138   14 14
No Yes Kluyveromyces thermotolerans CBS 6340   12 12
No Yes Lachancea kluyveri   12 12
No Yes Kluyveromyces waltii   11 11
No Yes Ashbya gossypii ATCC 10895   10 10
No Yes Dekkera bruxellensis CBS 2499 v2.0   10 10
No Yes Zygosaccharomyces rouxii   11 11
No Yes Saccharomyces mikatae MIT   14 14
No Yes Saccharomyces paradoxus MIT   15 15
No Yes Saccharomyces cerevisiae 76 Baker's yeast 15 15
No Yes Saccharomyces bayanus MIT   15 15
No Yes Kluyveromyces lactis   11 11
No Yes Schizosaccharomyces cryophilus OY26 22   12 12
No Yes Schizosaccharomyces octosporus yFS286   12 12
No Yes Schizosaccharomyces japonicus yFS275   12 12
No Yes Schizosaccharomyces pombe Fission yeast 12 12
No Yes Catenaria anguillulae PL171 v1.0   25 23
No Yes Allomyces macrogynus ATCC 38327   40 40
No Yes Mortierella verticillata NRRL 6337   29 29
No Yes Phycomyces blakesleeanus   43 43
No Yes Rhizopus oryzae RA 99-880   52 52
No Yes Mucor circinelloides   45 45
No Yes Rhizomucor miehei CAU432   38 38
No Yes Spizellomyces punctatus DAOM BR117   27 26
No Yes Dictyostelium discoideum   61 61
No Yes Dictyostelium purpureum   59 59
No Yes Entamoeba dispar 1.2   114 114
No Yes Entamoeba invadens 1.2   153 153
No Yes Entamoeba histolytica 1   119 119
No Yes Selaginella moellendorffii   5 5
No Yes Pinus taeda Loblolly pine 3 3
No Yes Picea abies Norway spruce 2 2
No Yes Eucalyptus grandis v201 Rose gum 11 11
No Yes Theobroma cacao B97-61/B2 v1 Cacao 7 7
No Yes Gossypium raimondii v221   56 56
No Yes Citrus clementina v165   7 7
No Yes Citrus sinensis v154 Sweet orange 21 21
No Yes Thellungiella halophila v173   12 12
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 19 19
No Yes Capsella rubella v183   10 10
No Yes Arabidopsis lyrata Lyrate rockcress 15 15
No Yes Arabidopsis thaliana 10 Thale cress 15 15
No Yes Carica papaya Papaya 7 7
No Yes Medicago truncatula Barrel medic 13 13
No Yes Phaseolus vulgaris v186 French bean 12 12
No Yes Glycine max v109 Soybean 24 24
No Yes Cucumis sativus v122 Cucumber 7 7
No Yes Fragaria vesca Wild strawberry 6 6
No Yes Malus domestica v196 Apple 11 11
No Yes Prunus persica v139 Peach 9 9
No Yes Linum usitatissimum v200 Flax 14 14
No Yes Manihot esculenta v147 Cassava 12 12
No Yes Populus trichocarpa v156 Black cottonwood 15 15
No Yes Vitis vinifera Wine grape 10 10
No Yes Mimulus guttatus v140 Spotted monkey flower 12 12
No Yes Solanum lycopersicum v.2.3 Tomato 9 9
No Yes Solanum tuberosum Potato 11 11
No Yes Actinidia chinensis Hongyang   12 12
No Yes Aquilegia coerulea v195   17 17
No Yes Triticum urartu 22   10 10
No Yes Triticum aestivum 22 Bread wheat 35 35
No Yes Aegilops tauschii 22   9 9
No Yes Brachypodium distachyon Stiff brome 14 14
No Yes Oryza barthii 22 African wild rice 20 20
No Yes Oryza meridionalis 22   26 26
No Yes Oryza glumaepatula 22   28 28
No Yes Oryza glaberrima African rice 6 6
No Yes Oryza punctata 22   20 20
No Yes Oryza nivara 22   21 21
No Yes Oryza brachyantha 22 Malo sina 11 11
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 18 18
No Yes Oryza sativa v193 Rice 18 18
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 20 20
No Yes Zea mays subsp. mays Maize 24 24
No Yes Zea mays v181 Maize 28 28
No Yes Sorghum bicolor Sorghum 12 12
No Yes Setaria italica v164 Foxtail millet 13 13
No Yes Panicum virgatum v202 Switchgrass 25 25
No Yes Musa balbisiana Balbis banana 17 16
No Yes Musa acuminata 22 Wild Malaysian banana 15 15
No Yes Amborella trichopoda 22   6 6
No Yes Physcomitrella patens   8 8
No Yes Ostreococcus tauri   1 1
No Yes Micromonas sp. RCC299   1 1
No Yes Micromonas pusilla CCMP1545 v3.0   2 2
No Yes Asterochloris sp. Cgr/DA1pho v1.0   1 1
No Yes Chlorella variabilis sp. NC64A   2 2
No Yes Chlorella vulgaris   2 2
No Yes Volvox carteri f. nagariensis   2 2
No Yes Volvox carteri v199   2 2
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Cyanidioschyzon merolae strain 10D 22   2 2
No Yes Cyanidioschyzon merolae   2 2
No Yes Porphyridium purpureum 02_2012   1 1
No Yes Thecamonas trahens ATCC 50062   78 67
No Yes Bigelowiella natans CCMP2755 22   33 33
No Yes Giardia lamblia 2.3   3 3
No Yes Cyanophora paradoxa   3 3
No Yes Leishmania mexicana 2.4   1 1
No Yes Leishmania major strain Friedlin   1 1
No Yes Leishmania infantum JPCM5 2.4   1 1
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Trypanosoma vivax   1 1
No Yes Trypanosoma cruzi strain CL Brener   1 1
No Yes Trypanosoma congolense 2.4   1 1
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Trypanosoma brucei gambiense v4.1   1 1
No Yes Ectocarpus siliculosus   4 4
No Yes Aureococcus anophagefferens   2 2
No Yes Albugo laibachii 22   16 16
No Yes Pythium iwayamai DAOM BR242034 22   12 12
No Yes Pythium arrhenomanes ATCC 12531 22   11 10
No Yes Pythium ultimum v1.7-2   10 10
No Yes Pythium aphanidermatum DAOM BR444 22   9 9
No Yes Pythium vexans DAOM BR484 22   9 9
No Yes Pythium irregulare DAOM BR486 22   9 9
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 9 9
No Yes Phytophthora sojae 1.1   9 9
No Yes Phytophthora infestans T30-4   10 10
No Yes Phytophthora capsici   11 11
No Yes Hyaloperonospora arabidopsidis 22   8 8
No Yes Phaeodactylum tricornutumCCAP 1055/1   1 1
No Yes Fragilariopsis cylindrus   1 1
No Yes Thalassiosira pseudonana CCMP1335   1 1
No Yes Paramecium tetraurelia   15 15
No Yes Tetrahymena thermophila SB210 1   3 3
No Yes Ichthyophthirius multifiliis strain G5   1 1
No Yes Cryptosporidium hominis   1 1
No Yes Cryptosporidium muris   1 1
No Yes Cryptosporidium parvum Iowa II   1 1
No Yes Neospora caninum   1 1
No Yes Toxoplasma gondii VEG   1 1
No Yes Toxoplasma gondii ME49   1 1
No Yes Toxoplasma gondii GT1   1 1
No Yes Babesia bovis T2Bo   2 2
No Yes Theileria parva   1 1
No Yes Theileria annulata   1 1
No Yes Plasmodium falciparum 3D7   1 1
No Yes Plasmodium vivax SaI-1 7.0   1 1
No Yes Plasmodium knowlesi strain H   1 1
No Yes Plasmodium yoelii ssp. yoelii 1   1 1
No Yes Plasmodium chabaudi   1 1
No Yes Plasmodium berghei ANKA   1 1
No Yes Naegleria gruberi   36 36
No Yes Trichomonas vaginalis   64 64
No Yes Guillardia theta CCMP2712 v1.0   9 9
No Yes Emiliania huxleyi CCMP1516   6 6
No Yes Parachlamydia acanthamoebae UV-7   1 1
No Yes Pseudovibrio sp. FO-BEG1   1 1
No Yes Legionella longbeachae NSW150   1 1
No Yes Legionella pneumophila str. Corby   1 1
No Yes Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)   1 1
No Yes Providencia stuartii MRSN 2154   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 136 134
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 75 75
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 34 34
No Yes Ascaris suum Victoria/Ghent Pig roundworm 27 27
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 59 59
No Yes Cryptococcus neoformans var. grubii H99   13 13
No Yes Cryptococcus neoformans B-3501A   14 14
No Yes Cryptococcus neoformans JEC21   13 13
No Yes Ajellomyces dermatitidis ER-3   10 10
No Yes Histoplasma capsulatum H143   11 11
No Yes Histoplasma capsulatum H88   10 10
No Yes Histoplasma capsulatum G186AR   10 10
No Yes Paracoccidioides brasiliensis Pb01   10 10
No Yes Paracoccidioides brasiliensis Pb03   10 10
No Yes Coccidioides posadasii str. Silveira   11 11
No Yes Coccidioides immitis RMSCC 3703   10 10
No Yes Coccidioides immitis RMSCC 2394   11 11
No Yes Coccidioides immitis H538.4   11 11
No Yes Aspergillus fumigatus A1163   10 10
No Yes Candida albicans WO-1   13 13
No Yes Saccharomyces cerevisiae UC5   14 14
No Yes Saccharomyces cerevisiae PW5   11 11
No Yes Saccharomyces cerevisiae FL100   5 5
No Yes Saccharomyces cerevisiae CLIB324   3 3
No Yes Saccharomyces cerevisiae CBS7960   8 8
No Yes Saccharomyces cerevisiae YJM269   13 13
No Yes Saccharomyces cerevisiae T7   15 15
No Yes Saccharomyces cerevisiae FostersB   9 9
No Yes Saccharomyces cerevisiae FostersO   7 7
No Yes Saccharomyces cerevisiae VL3   6 6
No Yes Saccharomyces cerevisiae Vin13   11 11
No Yes Saccharomyces cerevisiae LalvinQA23   10 10
No Yes Saccharomyces cerevisiae AWRI796   9 9
No Yes Saccharomyces cerevisiae Sigma1278b   15 15
No Yes Saccharomyces cerevisiae W303   15 15
No Yes Saccharomyces cerevisiae JAY291   15 15
No Yes Saccharomyces cerevisiae AWRI1631   8 8
No Yes Saccharomyces cerevisiae YPS163   6 6
No Yes Saccharomyces cerevisiae M22   1 1
No Yes Saccharomyces cerevisiae T73   4 4
No Yes Saccharomyces cerevisiae CLIB215   11 11
No Yes Saccharomyces cerevisiae Y10   4 4
No Yes Saccharomyces cerevisiae YJM789   15 15
No Yes Saccharomyces cerevisiae YJM789   15 15
No Yes Saccharomyces cerevisiae RM11-1a   13 13
No Yes Saccharomyces cerevisiae RM11-1a   13 13
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 15 15
No Yes Schizosaccharomyces pombe 972h-   12 12
No Yes Batrachochytrium dendrobatidis JEL423   22 21
No Yes Batrachochytrium dendrobatidis JAM81   18 18
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 7 7
No Yes Hordeum vulgare 22 Domesticated barley 15 15
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 12 12
No Yes Trypanosoma brucei Lister 427 v4.1   1 1
No Yes Neospora caninum Nc-Liverpool 6.2   1 1
No Yes Plasmodium falciparum HB3   1 1
No Yes Legionella pneumophila str. Paris   1 1
No Yes Legionella pneumophila str. Lens   1 1
No Yes Legionella pneumophila subsp. pneumophila LPE509   1 1
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   1 1
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   1 1
No Yes Legionella pneumophila subsp. pneumophila   1 1
No Yes Legionella pneumophila subsp. pneumophila   1 1
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   1 1
No Yes Legionella pneumophila 2300/99 Alcoy   1 1
No Yes Homo sapiens (NCBI version) Human 154 154
No Yes Homo sapiens 75_37 (old version GRC) Human 429 429
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 91 90
No Yes Heliconius numata (Incomplete)   4 4
No Yes Loa loa v3.3 (Request) Eye worm 29 29
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 34 34
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 23 23
No Yes Moniliophthora perniciosa FA553 (Genome survey)   11 11
No Yes Encephalitozoon intestinalis (endoparasite)   4 4
No Yes Encephalitozoon cuniculi (endoparasite)   4 4
No Yes Lotus japonicus (Early assembly)   11 11
No Yes Malus x domestica (Duplicate) Apple 11 11
No Yes Ricinus communis (Early assembly) Castor bean 8 8
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   18 18
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 9 9
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 9 9
No Yes Phoenix dactylifera (Early draft) Date palm 11 9
No Yes Homo sapiens 69_37 Human 94 94
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 83 83
No Yes Gorilla gorilla 69_3.1 Western gorilla 97 97
No Yes Pongo abelii 69_2 Sumatran orangutan 91 91
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 82 82
No Yes Macaca mulatta 69_1 Rhesus monkey 92 92
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 89 89
No Yes Otolemur garnettii 69_3 Small-eared galago 86 86
No Yes Microcebus murinus 69_1 Gray mouse lemur 88 79
No Yes Rattus norvegicus 69_3.4 Norway rat 139 113
No Yes Mus musculus 69_38 House mouse 90 89
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 79 79
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 85 81
No Yes Cavia porcellus 69_3 Domestic guinea pig 86 86
No Yes Oryctolagus cuniculus 69_2 Rabbit 93 88
No Yes Ochotona princeps 69 American pika 84 78
No Yes Tupaia belangeri 69 Northern tree shrew 78 73
No Yes Sus scrofa 69_10.2 Pig 93 93
No Yes Bos taurus 69_3.1 Cattle 93 90
No Yes Vicugna pacos 69_1 Alpaca 57 55
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 86 84
No Yes Mustela putorius furo 69_1.0 Domestic ferret 88 88
No Yes Ailuropoda melanoleuca 69_1 Giant panda 86 85
No Yes Canis familiaris 69_3.1 Dog 93 91
No Yes Felis catus 69 Domestic cat 88 81
No Yes Equus caballus 69_2 Horse 87 87
No Yes Myotis lucifugus 69_2.0 Little brown bat 90 90
No Yes Pteropus vampyrus 69_1 Large flying fox 90 88
No Yes Sorex araneus 69_1 European shrew 75 68
No Yes Erinaceus europaeus 69 Western European hedgehog 72 70
No Yes Procavia capensis 69_1 Cape rock hyrax 90 86
No Yes Loxodonta africana 69_3 African savanna elephant 93 92
No Yes Echinops telfairi 69 Small Madagascar hedgehog 81 76
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 70 64
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 56 54
No Yes Macropus eugenii 69_1.0 Tammar wallaby 90 83
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 86 86
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 89 89
No Yes Ornithorhynchus anatinus 69_5 Platypus 89 89
No Yes Petromyzon marinus 69_7.0 Sea lamprey 40 40
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 88 88
No Yes Meleagris gallopavo 69_2 Turkey 82 82
No Yes Gallus gallus 69_2 Chicken 81 80
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 82 82
No Yes Anolis carolinensis 69_2.0 Green anole 88 88
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 91 91
No Yes Latimeria chalumnae 69_1 Coelacanth 92 92
No Yes Gadus morhua 69_1 Atlantic cod 116 112
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 120 120
No Yes Takifugu rubripes 69_4 Torafugu 118 118
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 113 113
No Yes Oryzias latipes 69_1 Japanese medaka 104 104
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 121 120
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 121 121
No Yes Danio rerio 69_9 Zebrafish 135 135
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 29 29
No Yes Ciona intestinalis 69 Vase tunicate 34 34
No Yes Drosophila melanogaster 69_5 Fruit fly 29 29
No Yes Caenorhabditis elegans 69_215 Roundworm 30 30
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 15 15
No Yes Arabidopsis thaliana 10 Thale cress 9 9
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   5 5
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   2 2
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   1 1
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   1 1
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   2 2
No Yes Protozoadb 2010_08 (Protozoadb)   622 622
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   4130 4071
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   3 3
No Yes Uniprot 2017_06 genome   39293 39054
No Yes Global Ocean Sampling Expedition (GOS)   38 38
No Yes PDB chains (SCOP 1.75) (PDB)   10 10
No Yes Protein Data Bank (all PDB sequenc)   88 88
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   174 174
No Yes TargetDB (Targets)   127 127

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