SUPERFAMILY 1.75 HMM library and genome assignments server

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beta-Galactosidase/glucuronidase domain superfamily domain assignments
in
Fomitiporia mediterranea v1.0

Assignment details

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Fomitiporia mediterranea v1.0 has 4 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Fomme1|21590|fgenesh1_kg.8_#_356_#_isotig04211   0.000000000432   198-304   beta-Galactosidase/glucuronidase domain  
  0.00000187   806-854   beta-Galactosidase/glucuronidase domain  
jgi|Fomme1|84292|e_gw1.6.802.1   0.00000245   759-853   beta-Galactosidase/glucuronidase domain  
  0.00000863   265-360   beta-Galactosidase/glucuronidase domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   216013 216013
No Yes Homo sapiens 76_38 Human 11 7
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 5 3
No Yes Gorilla gorilla 76_3.1 Western gorilla 8 6
No Yes Pongo abelii 76_2 Sumatran orangutan 6 4
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 4 2
No Yes Papio anubis 76 Olive baboon 5 3
No Yes Macaca mulatta 76_1 Rhesus monkey 4 2
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 9 3
No Yes Otolemur garnettii 76_3 Small-eared galago 4 2
No Yes Microcebus murinus 76_1 Gray mouse lemur 3 2
No Yes Rattus norvegicus 76_5.0 Norway rat 5 4
No Yes Mus musculus 76_38 House mouse 4 2
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 2 1
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 4 2
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 4 2
No Yes Cavia porcellus 76_3 Domestic guinea pig 4 2
No Yes Oryctolagus cuniculus 76_2 Rabbit 4 2
No Yes Ochotona princeps 76 American pika 4 2
No Yes Tupaia belangeri 76 Northern tree shrew 2 1
No Yes Sus scrofa 76_10.2 Pig 5 3
No Yes Bos taurus 76_3.1 Cattle 4 2
No Yes Ovis aries 76_3.1 Sheep 4 2
No Yes Vicugna pacos 76_1 Alpaca 3 1
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 2 2
No Yes Mustela putorius furo 76_1.0 Domestic ferret 4 2
No Yes Ailuropoda melanoleuca 76_1 Giant panda 4 2
No Yes Canis familiaris 76_3.1 Dog 4 2
No Yes Felis catus 76_6.2 Domestic cat 4 2
No Yes Equus caballus 76_2 Horse 4 2
No Yes Myotis lucifugus 76_2.0 Little brown bat 4 2
No Yes Pteropus vampyrus 76_1 Large flying fox 3 2
No Yes Sorex araneus 76_1 European shrew 1 1
No Yes Erinaceus europaeus 76 Western European hedgehog 1 1
No Yes Procavia capensis 76_1 Cape rock hyrax 4 2
No Yes Loxodonta africana 76_3 African savanna elephant 4 2
No Yes Echinops telfairi 76 Small Madagascar hedgehog 4 2
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 4 2
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 4 2
No Yes Macropus eugenii 76_1.0 Tammar wallaby 2 2
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 3 2
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 3 2
No Yes Ornithorhynchus anatinus 76_5 Platypus 2 1
No Yes Saccoglossus kowalevskii v3.0   3 3
No Yes Petromyzon marinus 76_7.0 Sea lamprey 3 2
No Yes Meleagris gallopavo 76_2 Turkey 4 2
No Yes Gallus gallus 76_4 Chicken 4 2
No Yes Anas platyrhynchos 76_1.0 Mallard 4 2
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 4 2
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 4 2
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 4 2
No Yes Xenopus laevis African clawed frog 6 2
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 3 2
No Yes Latimeria chalumnae 76_1 Coelacanth 4 3
No Yes Lepisosteus oculatus 76 Spotted gar 6 3
No Yes Gadus morhua 76_1 Atlantic cod 4 2
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 7 3
No Yes Takifugu rubripes 76_4 Torafugu 4 4
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 6 4
No Yes Oryzias latipes 76_1 Japanese medaka 4 2
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 4 2
No Yes Poecilia formosa 76 Amazon molly 4 2
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 9 5
No Yes Astyanax mexicanus 76 Mexican tetra 3 2
No Yes Danio rerio 76_9 Zebrafish 6 4
No Yes Oikopleura dioica   1 1
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 8 5
No Yes Ciona intestinalis 76 Vase tunicate 5 4
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 3 3
No Yes Adineta vaga   12 12
No Yes Octopus bimaculoides 280   4 3
No Yes Crassostrea gigas 22 Pacific oyster 6 4
No Yes Lottia gigantea Owl limpet 9 7
No Yes Helobdella robusta   1 1
No Yes Capitella sp. I   5 5
No Yes Danaus plexippus OGS1.0 Monarch butterfly 2 2
No Yes Heliconius melpomene Postman butterfly 2 2
No Yes Bombyx mori Domestic silkworm 2 2
No Yes Nasonia vitripennis Jewel wasp 5 3
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 8 6
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 3 2
No Yes Linepithema humile v1.1 Argentine ant 3 2
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 1 1
No Yes Solenopsis invicta v.2.2.3 Red fire ant 4 4
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 2 2
No Yes Atta cephalotes v1.1   1 1
No Yes Camponotus floridanus v3.3 Florida carpenter ant 3 2
No Yes Lucilia cuprina Australian sheep blowfly 5 3
No Yes Drosophila grimshawi 1.3   4 4
No Yes Drosophila willistoni 1.3   5 5
No Yes Drosophila pseudoobscura 2.13   4 4
No Yes Drosophila persimilis 1.3   4 4
No Yes Drosophila suzukii   3 3
No Yes Drosophila yakuba 1.3   3 3
No Yes Drosophila simulans 1.3   3 3
No Yes Drosophila sechellia 1.3   4 4
No Yes Drosophila melanogaster 76_5 Fruit fly 7 7
No Yes Drosophila erecta 1.3   4 4
No Yes Drosophila ananassae 1.3   5 5
No Yes Drosophila virilis 1.2   4 4
No Yes Drosophila mojavensis 1.3   4 4
No Yes Culex pipiens quinquefasciatus Southern house mosquito 3 2
No Yes Anopheles darlingi 22 American malaria mosquito 1 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 2 2
No Yes Tribolium castaneum 3.0 Red flour beetle 8 5
No Yes Pediculus humanus corporis (Early assembly) Human body louse 5 3
No Yes Acyrthosiphon pisum Pea aphid 4 3
No Yes Rhodnius prolixus 22   4 4
No Yes Daphnia pulex Common water flea 5 4
No Yes Strigamia maritima 22   3 2
No Yes Sarcoptes scabiei   2 2
No Yes Tetranychus urticae Two-spotted spider mite 2 2
No Yes Ixodes scapularis (Preliminary) Black-legged tick 2 2
No Yes Pristionchus pacificus   3 3
No Yes Meloidogyne incognita Southern root-knot nematode 4 4
No Yes Meloidogyne hapla   1 1
No Yes Onchocerca volvulus 22   2 2
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 2 2
No Yes Caenorhabditis japonica   2 2
No Yes Caenorhabditis brenneri   2 2
No Yes Caenorhabditis remanei   2 2
No Yes Caenorhabditis elegans 76_235 Roundworm 2 2
No Yes Caenorhabditis briggsae 2   2 2
No Yes Trichinella spiralis 22   2 2
No Yes Hymenolepis microstoma   1 1
No Yes Echinococcus multilocularis   1 1
No Yes Schistosoma mansoni   1 1
No Yes Mnemiopsis leidyi Sea walnut 1 1
No Yes Acropora digitifera v1.0   5 3
No Yes Nematostella vectensis 1.0 Starlet sea anemone 6 4
No Yes Hydra vulgaris   2 2
No Yes Amphimedon queenslandica   14 13
No Yes Trichoplax adhaerens   1 1
No Yes Proterospongia sp. ATCC 50818   5 4
No Yes Monosiga brevicollis   9 7
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   2 1
No Yes Mortierella verticillata NRRL 6337   1 1
No Yes Sporisorium reilianum 22   1 1
No Yes Ustilago maydis   1 1
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   5 4
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   13 10
No Yes Melampsora laricis-populina   5 4
No Yes Rhodotorula graminis WP1 v1.0   2 1
No Yes Sporobolomyces roseus IAM 13481   2 1
No Yes Microbotryum violaceum 22   2 1
No Yes Wallemia sebi v1.0   2 2
No Yes Sphaerobolus stellatus v1.0   6 3
No Yes Piloderma croceum F 1598 v1.0   6 3
No Yes Serpula lacrymans var. lacrymans S7.9   4 2
No Yes Coniophora puteana   10 5
No Yes Hydnomerulius pinastri v2.0   5 3
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   2 1
No Yes Pisolithus microcarpus 441 v1.0   2 1
No Yes Pisolithus tinctorius Marx 270 v1.0   2 1
No Yes Scleroderma citrinum Foug A v1.0   2 1
No Yes Coprinopsis cinerea okayama7 130 v3   4 2
No Yes Pleurotus ostreatus Oyster mushroom 5 3
No Yes Amanita thiersii Skay4041 v1.0   3 2
No Yes Amanita muscaria Koide v1.0 Fly agaric 3 3
No Yes Galerina marginata v1.0   6 3
No Yes Hebeloma cylindrosporum h7 v2.0   2 1
No Yes Laccaria bicolor S238N-H82   2 1
No Yes Agaricus bisporus var. bisporus   4 2
No Yes Schizophyllum commune   6 4
No Yes Stereum hirsutum FP-91666 SS1 v1.0   5 3
No Yes Heterobasidion annosum   5 3
No Yes Gloeophyllum trabeumv1.0   5 4
No Yes Punctularia strigosozonata v1.0   6 4
No Yes Sebacina vermifera MAFF 305830 v1.0   3 2
No Yes Fomitiporia mediterranea v1.0   4 2
No Yes Tulasnella calospora AL13/4D v1.0   6 5
No Yes Postia placenta   8 6
No Yes Wolfiporia cocos MD-104 SS10 v1.0   5 3
No Yes Fomitopsis pinicolav1.0   6 4
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   6 4
No Yes Phanerochaete chrysosporium RP-78 2.1   4 2
No Yes Dichomitus squalens   7 4
No Yes Trametes versicolor v1.0   7 5
No Yes Tremella mesenterica Witches' butter 2 1
No Yes Daldinia eschscholzii EC12 v1.0   15 9
No Yes Apiospora montagnei NRRL 25634 v1.0   18 10
No Yes Magnaporthe poae ATCC 64411 22   14 8
No Yes Magnaporthe grisea 70-15   15 8
No Yes Podospora anserina   12 7
No Yes Sporotrichum thermophile ATCC 42464   12 7
No Yes Thielavia terrestris NRRL 8126   13 8
No Yes Chaetomium globosum CBS 148.51   12 7
No Yes Neurospora tetrasperma   10 5
No Yes Neurospora discreta FGSC 8579   10 5
No Yes Neurospora crassa OR74A   10 5
No Yes Cryphonectria parasitica Chestnut blight fungus 9 6
No Yes Verticillium albo-atrum VaMs.102   10 6
No Yes Verticillium dahliae VdLs.17   10 6
No Yes Acremonium alcalophilumv 1.0   9 5
No Yes Glomerella graminicola 22   10 6
No Yes Fusarium graminearum   17 10
No Yes Nectria haematococca mpVI   18 11
No Yes Fusarium oxysporum f. sp. lycopersici 4286   12 8
No Yes Fusarium verticillioides 7600   16 10
No Yes Trichoderma asperellum CBS 433.97 v1.0   15 9
No Yes Trichoderma atroviride   16 10
No Yes Trichoderma citrinoviride v1.0   13 8
No Yes Trichoderma reesei 1.2   11 7
No Yes Trichoderma virens Gv29-8   20 11
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   13 8
No Yes Trichoderma harzianum CBS 226.95 v1.0   19 12
No Yes Amorphotheca resinae v1.0 Creosote fungus 5 3
No Yes Botrytis cinerea B05.10   4 2
No Yes Sclerotinia sclerotiorum   3 2
No Yes Didymella exigua CBS 183.55 v1.0   11 7
No Yes Leptosphaeria maculans 22   11 7
No Yes Setosphaeria turcica v1.0   11 7
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   11 7
No Yes Cochliobolus victoriae FI3 v1.0   11 7
No Yes Cochliobolus carbonum 26-R-13 v1.0   11 7
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 12 7
No Yes Alternaria brassicicola   8 7
No Yes Cochliobolus lunatus m118 v2.0   11 7
No Yes Pyrenophora teres f. teres 22   9 6
No Yes Pyrenophora tritici-repentis   11 7
No Yes Stagonospora nodorum   15 10
No Yes Mycosphaerella graminicola IPO323   11 7
No Yes Zasmidium cellare ATCC 36951 v1.0   15 10
No Yes Dothistroma septosporum   5 4
No Yes Septoria musiva v1.0   5 4
No Yes Mycosphaerella fijiensis CIRAD86   12 7
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   5 3
No Yes Paracoccidioides brasiliensis Pb18   3 2
No Yes Coccidioides posadasii RMSCC 3488   2 1
No Yes Coccidioides immitis RS   2 1
No Yes Ajellomyces dermatitidis SLH14081   3 2
No Yes Histoplasma capsulatum class NAmI strain WU24   2 1
No Yes Microsporum canis CBS 113480   5 2
No Yes Trichophyton equinum CBS 127.97   5 2
No Yes Trichophyton verrucosum HKI 0517   5 2
No Yes Arthroderma benhamiae CBS 112371   5 2
No Yes Trichophyton tonsurans CBS 112818   5 2
No Yes Trichophyton rubrum CBS 118892   5 2
No Yes Uncinocarpus reesii 1704   4 2
No Yes Aspergillus zonatus v1.0   9 5
No Yes Penicillium chrysogenum Wisconsin 54-1255   12 7
No Yes Penicillium chrysogenum v1.0   12 7
No Yes Aspergillus acidus v1.0   9 6
No Yes Aspergillus fumigatus Af293   11 6
No Yes Aspergillus brasiliensis v1.0   9 6
No Yes Aspergillus nidulans FGSC A4   15 10
No Yes Aspergillus sydowii v1.0   21 13
No Yes Aspergillus versicolor v1.0   21 13
No Yes Aspergillus glaucus   7 5
No Yes Aspergillus carbonarius ITEM 5010   8 5
No Yes Neosartorya fischeri NRRL 181   11 6
No Yes Aspergillus terreus NIH2624   16 10
No Yes Aspergillus tubingensis v1.0   9 6
No Yes Aspergillus wentii v1.0   8 5
No Yes Aspergillus oryzae RIB40   13 7
No Yes Aspergillus niger 22   9 6
No Yes Aspergillus niger ATCC 1015   5 3
No Yes Aspergillus flavus NRRL3357   13 8
No Yes Aspergillus clavatus NRRL 1   6 3
No Yes Penicillium marneffei ATCC 18224   10 6
No Yes Tuber melanosporum Mel28 22   4 2
No Yes Tuber melanosporum Vittad Perigord truffle 4 2
No Yes Dekkera bruxellensis CBS 2499 v2.0   4 2
No Yes Candida dubliniensis CD36   1 1
No Yes Candida tropicalis MYA-3404   1 1
No Yes Candida parapsilosis   2 1
No Yes Candida albicans SC5314   1 1
No Yes Lodderomyces elongisporus NRRL YB-4239   1 1
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   2 1
No Yes Pichia stipitis CBS 6054   6 3
No Yes Candida guilliermondii ATCC 6260   5 3
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   6 3
No Yes Debaromyces hansenii   5 2
No Yes Candida lusitaniae ATCC 42720   1 1
No Yes Kluyveromyces lactis   2 1
No Yes Spizellomyces punctatus DAOM BR117   1 1
No Yes Dictyostelium discoideum   1 1
No Yes Dictyostelium purpureum   1 1
No Yes Entamoeba dispar 1.2   1 1
No Yes Entamoeba invadens 1.2   1 1
No Yes Entamoeba histolytica 1   1 1
No Yes Selaginella moellendorffii   10 4
No Yes Pinus taeda Loblolly pine 3 2
No Yes Picea abies Norway spruce 2 1
No Yes Eucalyptus grandis v201 Rose gum 11 4
No Yes Theobroma cacao B97-61/B2 v1 Cacao 5 2
No Yes Gossypium raimondii v221   14 6
No Yes Citrus clementina v165   8 3
No Yes Citrus sinensis v154 Sweet orange 10 5
No Yes Thellungiella halophila v173   5 2
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 8 3
No Yes Capsella rubella v183   5 2
No Yes Arabidopsis lyrata Lyrate rockcress 5 2
No Yes Arabidopsis thaliana 10 Thale cress 9 4
No Yes Carica papaya Papaya 5 2
No Yes Medicago truncatula Barrel medic 8 3
No Yes Phaseolus vulgaris v186 French bean 8 3
No Yes Glycine max v109 Soybean 16 6
No Yes Cucumis sativus v122 Cucumber 12 5
No Yes Fragaria vesca Wild strawberry 5 2
No Yes Malus domestica v196 Apple 11 4
No Yes Prunus persica v139 Peach 10 4
No Yes Linum usitatissimum v200 Flax 12 6
No Yes Manihot esculenta v147 Cassava 4 2
No Yes Populus trichocarpa v156 Black cottonwood 7 3
No Yes Vitis vinifera Wine grape 5 2
No Yes Mimulus guttatus v140 Spotted monkey flower 11 4
No Yes Solanum lycopersicum v.2.3 Tomato 5 2
No Yes Solanum tuberosum Potato 3 1
No Yes Actinidia chinensis Hongyang   6 3
No Yes Aquilegia coerulea v195   20 8
No Yes Triticum urartu 22   2 1
No Yes Triticum aestivum 22 Bread wheat 13 5
No Yes Aegilops tauschii 22   5 2
No Yes Brachypodium distachyon Stiff brome 6 2
No Yes Oryza barthii 22 African wild rice 6 2
No Yes Oryza meridionalis 22   14 4
No Yes Oryza glumaepatula 22   6 2
No Yes Oryza glaberrima African rice 6 2
No Yes Oryza punctata 22   11 5
No Yes Oryza nivara 22   8 3
No Yes Oryza brachyantha 22 Malo sina 5 2
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 8 3
No Yes Oryza sativa v193 Rice 6 2
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 5 2
No Yes Panicum virgatum v202 Switchgrass 15 5
No Yes Setaria italica v164 Foxtail millet 7 3
No Yes Zea mays subsp. mays Maize 4 2
No Yes Zea mays v181 Maize 7 3
No Yes Sorghum bicolor Sorghum 8 2
No Yes Musa balbisiana Balbis banana 4 2
No Yes Musa acuminata 22 Wild Malaysian banana 5 2
No Yes Amborella trichopoda 22   6 4
No Yes Physcomitrella patens   9 4
No Yes Coccomyxa subellipsoidea sp. C-169 v2   9 7
No Yes Asterochloris sp. Cgr/DA1pho v1.0   2 2
No Yes Chlorella variabilis sp. NC64A   3 2
No Yes Chlorella vulgaris   8 6
No Yes Volvox carteri f. nagariensis   2 2
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Ostreococcus sp. RCC809   2 1
No Yes Ostreococcus lucimarinus CCE9901   2 1
No Yes Ostreococcus tauri   2 1
No Yes Bathycoccus prasinos   2 1
No Yes Micromonas sp. RCC299   1 1
No Yes Micromonas pusilla CCMP1545 v3.0   2 1
No Yes Porphyridium purpureum 02_2012   2 1
No Yes Bigelowiella natans CCMP2755 22   4 2
No Yes Ectocarpus siliculosus   3 2
No Yes Aureococcus anophagefferens   6 5
No Yes Albugo laibachii 22   1 1
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium arrhenomanes ATCC 12531 22   1 1
No Yes Pythium ultimum v1.7-2   1 1
No Yes Pythium aphanidermatum DAOM BR444 22   1 1
No Yes Pythium irregulare DAOM BR486 22   1 1
No Yes Pythium vexans DAOM BR484 22   2 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Phytophthora infestans T30-4   1 1
No Yes Phytophthora capsici   3 2
No Yes Phaeodactylum tricornutumCCAP 1055/1   2 2
No Yes Fragilariopsis cylindrus   1 1
No Yes Thalassiosira pseudonana CCMP1335   4 2
No Yes Perkinsus marinus ATCC 50983   1 1
No Yes Paramecium tetraurelia   3 1
No Yes Tetrahymena thermophila SB210 1   2 1
No Yes Ichthyophthirius multifiliis strain G5   2 1
No Yes Symbiodinium minutum clade B1 v1.2   9 8
No Yes Naegleria gruberi   3 2
No Yes Trichomonas vaginalis   6 4
No Yes Guillardia theta CCMP2712 v1.0   6 4
No Yes Emiliania huxleyi CCMP1516   16 13
No Yes Thermobaculum terrenum ATCC BAA-798   5 4
No Yes Acaryochloris marina MBIC11017   1 1
No Yes Gloeocapsa sp. PCC 7428   1 1
No Yes Nostoc punctiforme PCC 73102   1 1
No Yes Conexibacter woesei DSM 14684   1 1
No Yes Eggerthella sp. YY7918   1 1
No Yes Eggerthella lenta DSM 2243   1 1
No Yes Slackia heliotrinireducens DSM 20476   1 1
No Yes Atopobium parvulum DSM 20469   1 1
No Yes Coriobacterium glomerans PW2   4 3
No Yes Ilumatobacter coccineus   4 3
No Yes Modestobacter marinus   4 4
No Yes Kineococcus radiotolerans SRS30216   4 3
No Yes Catenulispora acidiphila DSM 44928   13 7
No Yes Frankia sp. EAN1pec   10 8
No Yes Thermobifida fusca YX   1 1
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   4 3
No Yes Streptosporangium roseum DSM 43021   2 2
No Yes Streptomyces coelicolor A3(2)   9 7
No Yes Streptomyces sp. PAMC26508   6 5
No Yes Streptomyces flavogriseus ATCC 33331   6 5
No Yes Streptomyces sp. SirexAA-E   4 4
No Yes Streptomyces griseus subsp. griseus NBRC 13350   2 2
No Yes Streptomyces bingchenggensis BCW-1   15 9
No Yes Streptomyces violaceusniger Tu 4113   18 11
No Yes Streptomyces avermitilis MA-4680   12 6
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces scabiei 87.22   11 7
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   15 8
No Yes Actinosynnema mirum DSM 43827   6 4
No Yes Saccharomonospora viridis DSM 43017   2 2
No Yes Saccharopolyspora erythraea NRRL 2338   5 4
No Yes Amycolatopsis mediterranei U32   25 14
No Yes Kribbella flavida DSM 17836   6 5
No Yes Propionibacterium propionicum F0230a   2 1
No Yes Propionibacterium acnes SK137   5 3
No Yes Microlunatus phosphovorus NM-1   4 3
No Yes Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1   3 2
No Yes Verrucosispora maris AB-18-032   1 1
No Yes Micromonospora sp. L5   2 2
No Yes Micromonospora aurantiaca ATCC 27029   2 2
No Yes Actinoplanes sp. N902-109   2 2
No Yes Actinoplanes sp. SE50/110   3 3
No Yes Actinoplanes missouriensis 431   3 3
No Yes Segniliparus rotundus DSM 44985   3 1
No Yes Tsukamurella paurometabola DSM 20162   2 1
No Yes Gordonia bronchialis DSM 43247   1 1
No Yes Rhodococcus jostii RHA1   2 1
No Yes Rhodococcus opacus B4   2 1
No Yes Rhodococcus erythropolis PR4   2 1
No Yes Mycobacterium rhodesiae NBB3   1 1
No Yes Mycobacterium chubuense NBB4   3 1
No Yes Corynebacterium efficiens YS-314   1 1
No Yes Sanguibacter keddieii DSM 10542   3 2
No Yes Beutenbergia cavernae DSM 12333   7 6
No Yes Microbacterium testaceum StLB037   6 5
No Yes Clavibacter michiganensis subsp. michiganensis NCPPB 382   6 4
No Yes Jonesia denitrificans DSM 20603   1 1
No Yes Brachybacterium faecium DSM 4810   4 3
No Yes Xylanimonas cellulosilytica DSM 15894   3 2
No Yes Cellulomonas fimi ATCC 484   3 2
No Yes [Cellvibrio] gilvus ATCC 13127   1 1
No Yes Arthrobacter phenanthrenivorans Sphe3   2 1
No Yes Arthrobacter chlorophenolicus A6   2 1
No Yes Arthrobacter aurescens TC1   1 1
No Yes Arthrobacter arilaitensis Re117   2 1
No Yes Kocuria rhizophila DC2201   2 1
No Yes Arthrobacter sp. Rue61a   3 2
No Yes Arthrobacter sp. FB24   2 1
No Yes Renibacterium salmoninarum ATCC 33209   2 2
No Yes Bifidobacterium longum subsp. longum JDM301   2 1
No Yes Bifidobacterium animalis subsp. lactis Bl-04   4 2
No Yes Bifidobacterium dentium Bd1   7 6
No Yes Bifidobacterium breve ACS-071-V-Sch8b   7 4
No Yes Bifidobacterium bifidum S17   5 3
No Yes Bifidobacterium adolescentis ATCC 15703   5 3
No Yes Arcanobacterium haemolyticum DSM 20595   1 1
No Yes Mobiluncus curtisii ATCC 43063   3 2
No Yes Actinomyces sp. F0330   2 1
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270   7 4
No Yes Anaerolinea thermophila UNI-1   5 2
No Yes Herpetosiphon aurantiacus DSM 785   3 2
No Yes Roseiflexus sp. RS-1   6 4
No Yes Roseiflexus castenholzii DSM 13941   6 4
No Yes Chloroflexus sp. MS-G   1 1
No Yes Chloroflexus sp. Y-400-fl   1 1
No Yes Chloroflexus aggregans DSM 9485   1 1
No Yes Chloroflexus aurantiacus J-10-fl   1 1
No Yes Truepera radiovictrix DSM 17093   1 1
No Yes Deinococcus deserti VCD115   3 3
No Yes Deinococcus maricopensis DSM 21211   2 2
No Yes Deinococcus geothermalis DSM 11300   2 2
No Yes Anaerococcus prevotii DSM 20548   1 1
No Yes Megamonas hypermegale   4 2
No Yes Selenomonas sputigena ATCC 35185   2 1
No Yes Selenomonas ruminantium subsp. lactilytica TAM6421   2 1
No Yes Erysipelothrix rhusiopathiae str. Fujisawa   1 1
No Yes Eubacterium siraeum   3 2
No Yes Clostridium cellulolyticum H10   6 4
No Yes Ethanoligenens harbinense YUAN-3   5 2
No Yes Faecalibacterium prausnitzii   8 7
No Yes Ruminococcus sp.   5 3
No Yes Ruminococcus albus 7   4 3
No Yes butyrate-producing bacterium SM4/1   2 1
No Yes Desulfosporosinus acidiphilus SJ4   1 1
No Yes Desulfosporosinus orientis DSM 765   1 1
No Yes Dehalobacter sp. DCA   1 1
No Yes Dehalobacter sp. CF   1 1
No Yes Syntrophobotulus glycolicus DSM 8271   1 1
No Yes Desulfitobacterium hafniense Y51   1 1
No Yes Desulfitobacterium dehalogenans ATCC 51507   1 1
No Yes Eubacterium eligens ATCC 27750   3 2
No Yes Clostridium saccharolyticum WM1   7 4
No Yes Clostridium phytofermentans ISDg   4 4
No Yes Clostridium lentocellum DSM 5427   5 4
No Yes [Ruminococcus] obeum   3 2
No Yes [Ruminococcus] torques   3 2
No Yes Eubacterium rectale M104/1   5 4
No Yes Eubacterium rectale ATCC 33656   4 3
No Yes Coprococcus sp. ART55/1   2 1
No Yes Roseburia hominis A2-183   8 6
No Yes Roseburia intestinalis   10 7
No Yes Butyrivibrio proteoclasticus B316   9 7
No Yes Butyrivibrio fibrisolvens   4 3
No Yes Candidatus Arthromitus sp. SFB-mouse-Japan   2 1
No Yes Clostridium sp. BNL1100   3 2
No Yes Clostridium beijerinckii NCIMB 8052   2 1
No Yes Clostridium perfringens ATCC 13124   6 4
No Yes Clostridium cellulovorans 743B   7 4
No Yes Mahella australiensis 50-1 BON   8 6
No Yes Caldicellulosiruptor obsidiansis OB47   7 5
No Yes Caldicellulosiruptor kronotskyensis 2002   6 4
No Yes Caldicellulosiruptor hydrothermalis 108   4 3
No Yes Caldicellulosiruptor owensensis OL   5 3
No Yes Caldicellulosiruptor lactoaceticus 6A   4 2
No Yes Caldicellulosiruptor kristjanssonii 177R1B   3 2
No Yes Caldicellulosiruptor saccharolyticus DSM 8903   7 4
No Yes Caldicellulosiruptor bescii DSM 6725   6 4
No Yes Thermoanaerobacterium xylanolyticum LX-11   1 1
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571   3 1
No Yes Tepidanaerobacter acetatoxydans Re1   2 1
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   4 3
No Yes Thermoanaerobacter pseudethanolicus ATCC 33223   4 2
No Yes Thermoanaerobacter sp. X514   1 1
No Yes Thermoanaerobacter italicus Ab9   3 2
No Yes Thermoanaerobacter wiegelii Rt8.B1   3 2
No Yes Thermoanaerobacter brockii subsp. finnii Ako-1   4 2
No Yes Halothermothrix orenii H 168   6 4
No Yes Halanaerobium hydrogeniformans   2 2
No Yes Halanaerobium praevalens DSM 2228   5 2
No Yes Carnobacterium sp. 17-4   1 1
No Yes Carnobacterium sp. WN1359   2 1
No Yes Aerococcus urinae ACS-120-V-Col10a   1 1
No Yes Melissococcus plutonius DAT561   2 2
No Yes Enterococcus hirae ATCC 9790   1 1
No Yes Enterococcus faecium Aus0004   1 1
No Yes Enterococcus faecalis 62   2 1
No Yes Weissella koreensis KACC 15510   1 1
No Yes Oenococcus oeni PSU-1   2 1
No Yes Leuconostoc sp. C2   2 1
No Yes Leuconostoc kimchii IMSNU 11154   2 1
No Yes Leuconostoc citreum KM20   2 2
No Yes Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293   2 1
No Yes Leuconostoc gasicomitatum LMG 18811   2 1
No Yes Lactobacillus casei ATCC 334   2 1
No Yes Lactobacillus kefiranofaciens ZW3   1 1
No Yes Lactobacillus crispatus ST1   1 1
No Yes Lactobacillus rhamnosus Lc 705   2 2
No Yes Lactobacillus salivarius CECT 5713   2 1
No Yes Lactobacillus fermentum IFO 3956   1 1
No Yes Lactobacillus amylovorus GRL1118   1 1
No Yes Lactobacillus sakei subsp. sakei 23K   1 1
No Yes Lactobacillus reuteri DSM 20016   1 1
No Yes Lactobacillus plantarum JDM1   1 1
No Yes Lactobacillus helveticus DPC 4571   1 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365   2 1
No Yes Lactobacillus buchneri NRRL B-30929   3 3
No Yes Lactobacillus buchneri   3 3
No Yes Lactobacillus brevis ATCC 367   2 2
No Yes Lactobacillus acidophilus 30SC   1 1
No Yes Pediococcus pentosaceus ATCC 25745   1 1
No Yes Streptococcus sp. I-P16   1 1
No Yes Streptococcus sp. I-G2   1 1
No Yes Streptococcus intermedius JTH08   1 1
No Yes Streptococcus pseudopneumoniae IS7493   1 1
No Yes Streptococcus pasteurianus ATCC 43144   1 1
No Yes Streptococcus equi subsp. equi 4047   2 2
No Yes Streptococcus dysgalactiae subsp. equisimilis GGS_124   2 2
No Yes Streptococcus infantarius subsp. infantarius CJ18   2 1
No Yes Streptococcus mitis B6   2 2
No Yes Streptococcus uberis 0140J   1 1
No Yes Streptococcus parasanguinis ATCC 15912   1 1
No Yes Streptococcus pyogenes str. Manfredo   1 1
No Yes Streptococcus pneumoniae P1031   1 1
No Yes Streptococcus agalactiae A909   1 1
No Yes Streptococcus thermophilus LMD-9   2 1
No Yes Streptococcus suis P1/7   1 1
No Yes Streptococcus salivarius 57.I   2 1
No Yes Streptococcus oralis Uo5   1 1
No Yes Streptococcus gordonii str. Challis substr. CH1   1 1
No Yes Kyrpidia tusciae DSM 2912   3 1
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446   2 1
No Yes Brevibacillus brevis NBRC 100599   2 1
No Yes Paenibacillus sp. JDR-2   24 18
No Yes Paenibacillus terrae HPL-003   9 6
No Yes Paenibacillus mucilaginosus 3016   23 15
No Yes Paenibacillus polymyxa M1   7 4
No Yes Bacillus selenitireducens MLS10   3 2
No Yes Geobacillus thermoglucosidasius C56-YS93   3 1
No Yes Geobacillus sp. WCH70   3 1
No Yes Geobacillus thermodenitrificans NG80-2   1 1
No Yes Halobacillus halophilus DSM 2266   1 1
No Yes Bacillus halodurans C-125   2 1
No Yes Bacillus clausii KSM-K16   1 1
No Yes Bacillus cellulosilyticus DSM 2522   4 3
No Yes Bacillus megaterium DSM 319   2 1
No Yes Staphylococcus pseudintermedius HKU10-03   1 1
No Yes Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305   2 2
No Yes Staphylococcus haemolyticus JCSC1435   1 1
No Yes Staphylococcus carnosus subsp. carnosus TM300   1 1
No Yes Melioribacter roseus P3M   15 11
No Yes Ignavibacterium album JCM 16511   2 2
No Yes Chloroherpeton thalassium ATCC 35110   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   8 5
No Yes Niastella koreensis GR20-10   23 18
No Yes Chitinophaga pinensis DSM 2588   28 18
No Yes Rhodothermus marinus DSM 4252   2 2
No Yes Belliella baltica DSM 15883   1 1
No Yes Cyclobacterium marinum DSM 745   1 1
No Yes Fibrella aestuarina   3 2
No Yes Leadbetterella byssophila DSM 17132   2 2
No Yes Dyadobacter fermentans DSM 18053   4 3
No Yes Spirosoma linguale DSM 74   6 6
No Yes Runella slithyformis DSM 19594   10 6
No Yes Parabacteroides distasonis ATCC 8503   17 11
No Yes Tannerella forsythia ATCC 43037   11 7
No Yes Paludibacter propionicigenes WB4   9 6
No Yes Odoribacter splanchnicus DSM 20712   8 4
No Yes Prevotella melaninogenica ATCC 25845   8 4
No Yes Prevotella denticola F0289   4 2
No Yes Prevotella ruminicola 23   15 9
No Yes Porphyromonas gingivalis ATCC 33277   6 3
No Yes Alistipes finegoldii DSM 17242   12 8
No Yes Bacteroides salanitronis DSM 18170   13 11
No Yes Bacteroides helcogenes P 36-108   17 11
No Yes Bacteroides vulgatus ATCC 8482   37 25
No Yes Bacteroides thetaiotaomicron VPI-5482   51 32
No Yes Bacteroides fragilis YCH46   23 16
No Yes Pedobacter saltans DSM 12145   18 17
No Yes Solitalea canadensis DSM 3403   8 5
No Yes Pedobacter heparinus DSM 2366   11 9
No Yes Sphingobacterium sp. 21   23 15
No Yes Fluviicola taffensis DSM 16823   1 1
No Yes Zunongwangia profunda SM-A87   18 10
No Yes Gramella forsetii KT0803   8 6
No Yes Maribacter sp. HTCC2170   8 4
No Yes Aequorivita sublithincola DSM 14238   3 1
No Yes Zobellia galactanivorans   10 9
No Yes Muricauda ruestringensis DSM 13258   2 1
No Yes Cellulophaga algicola DSM 14237   5 5
No Yes Cellulophaga lytica DSM 7489   5 4
No Yes Ornithobacterium rhinotracheale DSM 15997   8 4
No Yes Capnocytophaga canimorsus Cc5   5 3
No Yes Capnocytophaga ochracea DSM 7271   8 5
No Yes Flavobacterium indicum GPTSA100-9   3 1
No Yes Flavobacterium johnsoniae UW101   18 14
No Yes Fibrobacter succinogenes subsp. succinogenes S85   2 1
No Yes Phycisphaera mikurensis NBRC 102666   9 8
No Yes Planctomyces brasiliensis DSM 5305   1 1
No Yes Rhodopirellula baltica SH 1   1 1
No Yes Coraliomargarita akajimensis DSM 45221   8 6
No Yes Opitutus terrae PB90-1   13 11
No Yes Akkermansia muciniphila ATCC BAA-835   7 5
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   1 1
No Yes Brachyspira murdochii DSM 12563   2 2
No Yes Brachyspira intermedia PWS/A   2 2
No Yes Brachyspira pilosicoli 95/1000   1 1
No Yes Brachyspira hyodysenteriae WA1   2 2
No Yes Spirochaeta smaragdinae DSM 11293   2 1
No Yes Sphaerochaeta pleomorpha str. Grapes   6 3
No Yes Sphaerochaeta globus str. Buddy   8 5
No Yes Sphaerochaeta coccoides DSM 17374   7 4
No Yes Spirochaeta caldaria DSM 7334   5 2
No Yes Treponema azotonutricium ZAS-9   9 5
No Yes Treponema primitia ZAS-2   2 1
No Yes Treponema brennaborense DSM 12168   5 2
No Yes Treponema succinifaciens DSM 2489   3 2
No Yes Treponema denticola ATCC 35405   1 1
No Yes Spirochaeta thermophila DSM 6192   3 2
No Yes Petrotoga mobilis SJ95   2 1
No Yes Mesotoga prima MesG1.Ag.4.2   1 1
No Yes Thermosipho africanus TCF52B   2 1
No Yes Thermotoga lettingae TMO   5 3
No Yes Thermotoga thermarum DSM 5069   4 3
No Yes Thermotoga sp. RQ2   3 2
No Yes Thermotoga naphthophila RKU-10   4 3
No Yes Thermotoga petrophila RKU-1   5 4
No Yes Thermotoga neapolitana DSM 4359   4 4
No Yes Thermotoga maritima MSB8   4 3
No Yes Dictyoglomus turgidum DSM 6724   5 3
No Yes Dictyoglomus thermophilum H-6-12   7 4
No Yes Candidatus Solibacter usitatus Ellin6076   13 9
No Yes Granulicella tundricola MP5ACTX9   8 6
No Yes Granulicella mallensis MP5ACTX8   27 17
No Yes Candidatus Koribacter versatilis Ellin345   9 4
No Yes Terriglobus saanensis SP1PR4   9 7
No Yes Terriglobus roseus DSM 18391   6 4
No Yes Acidobacterium capsulatum ATCC 51196   7 3
No Yes Streptobacillus moniliformis DSM 12112   1 1
No Yes Sebaldella termitidis ATCC 33386   3 2
No Yes Geobacter sp. M21   1 1
No Yes Geobacter bemidjiensis Bem   1 1
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Stigmatella aurantiaca DW4/3-1   5 5
No Yes Neisseria lactamica 020-06   2 1
No Yes Burkholderia rhizoxinica HKI 454   2 1
No Yes Burkholderia phytofirmans PsJN   1 1
No Yes Burkholderia xenovorans LB400   1 1
No Yes Ralstonia eutropha JMP134   4 2
No Yes Cupriavidus metallidurans CH34   2 1
No Yes Ralstonia eutropha H16   2 1
No Yes Burkholderia sp. RPE64   2 1
No Yes Burkholderia sp. CCGE1002   1 1
No Yes Burkholderia thailandensis E264   1 1
No Yes Burkholderia pseudomallei 1106a   1 1
No Yes Burkholderia mallei SAVP1   1 1
No Yes Burkholderia ambifaria AMMD   2 1
No Yes Burkholderia cenocepacia HI2424   2 1
No Yes Burkholderia multivorans ATCC 17616   2 1
No Yes Burkholderia vietnamiensis G4   2 1
No Yes Burkholderia gladioli BSR3   6 3
No Yes Ramlibacter tataouinensis TTB310   1 1
No Yes Nitrosospira multiformis ATCC 25196   1 1
No Yes Methylovorus sp. MP688   1 1
No Yes Methylovorus glucosetrophus SIP3-4   1 1
No Yes Methylobacillus flagellatus KT   1 1
No Yes Asticcacaulis excentricus CB 48   22 15
No Yes Brevundimonas subvibrioides ATCC 15264   5 3
No Yes Caulobacter sp. K31   4 2
No Yes Caulobacter segnis ATCC 21756   2 2
No Yes Sphingopyxis alaskensis RB2256   1 1
No Yes Novosphingobium sp. PP1Y   1 1
No Yes Novosphingobium aromaticivorans DSM 12444   4 3
No Yes Pseudovibrio sp. FO-BEG1   1 1
No Yes Ruegeria sp. TM1040   1 1
No Yes Azospirillum lipoferum 4B   2 1
No Yes Azospirillum sp. B510   2 1
No Yes Azospirillum brasilense Sp245   3 2
No Yes Polymorphum gilvum SL003B-26A1   3 2
No Yes Methylobacterium radiotolerans JCM 2831   1 1
No Yes Ochrobactrum anthropi ATCC 49188   2 1
No Yes Sinorhizobium fredii NGR234   3 2
No Yes Sinorhizobium medicae WSM419   3 2
No Yes Sinorhizobium meliloti AK83   3 2
No Yes Genome sequence of Rhizobium sp. strain IRBG74   5 3
No Yes Rhizobium etli CIAT 652   6 4
No Yes Rhizobium leguminosarum bv. viciae 3841   6 5
No Yes Agrobacterium tumefaciens str. C58   4 2
No Yes Agrobacterium radiobacter K84   6 4
No Yes Agrobacterium sp. H13-3   4 2
No Yes Agrobacterium vitis S4   6 3
No Yes Mesorhizobium sp. BNC1   2 1
No Yes Pelagibacterium halotolerans B2   2 1
No Yes Methylocystis sp. SC2   1 1
No Yes Saccharophagus degradans 2-40   7 7
No Yes Teredinibacter turnerae T7901   1 1
No Yes Cellvibrio japonicus Ueda107   3 3
No Yes Aggregatibacter aphrophilus NJ8700   2 1
No Yes Haemophilus somnus 129PT   1 1
No Yes Gallibacterium anatis UMN179   2 1
No Yes Haemophilus parainfluenzae T3T1   2 1
No Yes Actinobacillus succinogenes 130Z   2 1
No Yes Actinobacillus pleuropneumoniae serovar 5b str. L20   2 1
No Yes Tolumonas auensis DSM 9187   3 2
No Yes Aeromonas veronii B565   4 2
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   4 2
No Yes Vibrio fischeri MJ11   6 3
No Yes Vibrio sp. Ex25   4 2
No Yes Vibrio harveyi ATCC BAA-1116   2 1
No Yes Vibrio parahaemolyticus RIMD 2210633   5 2
No Yes Vibrio anguillarum 775   4 2
No Yes Vibrio furnissii NCTC 11218   2 1
No Yes Vibrio vulnificus MO6-24/O   7 3
No Yes Vibrio cholerae O395   2 1
No Yes Photobacterium profundum SS9   7 3
No Yes Psychromonas ingrahamii 37   2 1
No Yes Psychromonas sp. CNPT3   2 1
No Yes Shewanella piezotolerans WP3   2 1
No Yes Shewanella loihica PV-4   2 1
No Yes Shewanella halifaxensis HAW-EB4   2 1
No Yes Shewanella sediminis HAW-EB3   2 1
No Yes Shewanella pealeana ATCC 700345   2 1
No Yes Shewanella baltica OS185   1 1
No Yes Shewanella amazonensis SB2B   3 1
No Yes Shewanella violacea DSS12   2 1
No Yes Pseudoalteromonas atlantica T6c   9 5
No Yes Glaciecola sp. 4H-3-7+YE-5   7 5
No Yes Glaciecola nitratireducens FR1064   2 1
No Yes Alteromonas sp. SN2   2 1
No Yes Alteromonas macleodii str. 'Deep ecotype'   3 2
No Yes Marinomonas sp. MWYL1   1 1
No Yes Pseudoxanthomonas suwonensis 11-1   1 1
No Yes Stenotrophomonas maltophilia K279a   3 1
No Yes Xylella fastidiosa M23   3 1
No Yes Xanthomonas axonopodis pv. citri str. 306   8 4
No Yes Xanthomonas albilineans GPE PC73   3 1
No Yes Xanthomonas oryzae pv. oryzae PXO99A   3 1
No Yes Xanthomonas campestris pv. campestris str. B100   8 4
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Edwardsiella tarda EIB202   2 2
No Yes Rahnella sp. Y9602   4 2
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   2 1
No Yes Yersinia pseudotuberculosis IP 31758   2 1
No Yes Yersinia pestis Pestoides F   2 1
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   2 1
No Yes Serratia sp. AS12   2 1
No Yes Serratia sp. ATCC 39006   2 1
No Yes Serratia plymuthica AS9   2 1
No Yes Serratia proteamaculans 568   4 2
No Yes Dickeya dadantii Ech703   2 1
No Yes Dickeya zeae Ech1591   2 1
No Yes Pectobacterium wasabiae WPP163   2 1
No Yes Pectobacterium sp. SCC3193   2 1
No Yes Pectobacterium atrosepticum SCRI1043   2 1
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   2 1
No Yes Pantoea sp. At-9b   2 1
No Yes Pantoea vagans C9-1   2 1
No Yes Pantoea ananatis LMG 20103   2 1
No Yes Erwinia tasmaniensis Et1/99   2 1
No Yes Erwinia sp. Ejp617   2 1
No Yes Erwinia billingiae Eb661   2 1
No Yes Erwinia amylovora ATCC 49946   2 1
No Yes Cronobacter turicensis z3032   3 2
No Yes Cronobacter sakazakii ES15   3 2
No Yes Enterobacteriaceae bacterium strain FGI 57   2 1
No Yes Shigella sonnei Ss046   5 3
No Yes Shigella flexneri 5 str. 8401   3 2
No Yes Shigella dysenteriae Sd197   2 1
No Yes Shigella boydii CDC 3083-94   1 1
No Yes Salmonella bongori NCTC 12419   2 1
No Yes Klebsiella oxytoca E718   4 2
No Yes Klebsiella variicola At-22   2 1
No Yes Klebsiella pneumoniae NTUH-K2044   3 2
No Yes Enterobacter aerogenes KCTC 2190   4 2
No Yes Escherichia fergusonii ATCC 35469   2 1
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   5 3
No Yes Enterobacter sp. R4-368   3 2
No Yes Enterobacter sp. 638   2 1
No Yes Enterobacter asburiae LF7a   4 2
No Yes Enterobacter cloacae subsp. dissolvens SDM   2 1
No Yes Citrobacter rodentium ICC168   2 1
No Yes Citrobacter koseri ATCC BAA-895   2 1
No Yes Ignisphaera aggregans DSM 17230   1 1
No Yes Sulfolobus islandicus Y.N.15.51   1 1
No Yes Sulfolobus solfataricus P2   1 1
No Yes Caldivirga maquilingensis IC-167   1 1
No Yes Thermococcus sp. 4557   1 1
No Yes Pyrococcus sp. ST04   1 1
No Yes Salinarchaeum sp. Harcht-Bsk1   3 2
No Yes Halopiger xanaduensis SH-6   4 3
No Yes Haloterrigena turkmenica DSM 5511   10 6
No Yes Halomicrobium mukohataei DSM 12286   3 2
No Yes Halorhabdus utahensis DSM 12940   6 4
No Yes Haloarcula hispanica ATCC 33960   1 1
No Yes Haloarcula marismortui ATCC 43049   1 1
No Yes Halalkalicoccus jeotgali B3   4 2
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 3 2
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 6 6
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 2 2
No Yes Ascaris suum Victoria/Ghent Pig roundworm 2 2
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 2 2
No Yes Paracoccidioides brasiliensis Pb01   3 2
No Yes Paracoccidioides brasiliensis Pb03   3 2
No Yes Coccidioides posadasii str. Silveira   2 1
No Yes Coccidioides immitis RMSCC 2394   2 1
No Yes Coccidioides immitis H538.4   2 1
No Yes Ajellomyces dermatitidis ER-3   3 2
No Yes Histoplasma capsulatum H143   3 2
No Yes Histoplasma capsulatum H88   3 2
No Yes Histoplasma capsulatum G186AR   3 2
No Yes Aspergillus fumigatus A1163   11 6
No Yes Candida albicans WO-1   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 5 2
No Yes Hordeum vulgare 22 Domesticated barley 12 8
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 5 2
No Yes Chamaesiphon minutus PCC 6605   1 1
No Yes Crinalium epipsammum PCC 9333   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   2 2
No Yes Cyanothece sp. PCC 7822   1 1
No Yes Cyanothece sp. PCC 7425   1 1
No Yes Cylindrospermum stagnale PCC 7417   1 1
No Yes Anabaena cylindrica PCC 7122   1 1
No Yes Mycoplasma cynos C142   1 1
No Yes Adlercreutzia equolifaciens DSM 19450   1 1
No Yes Frankia sp. EuI1c   7 5
No Yes Nocardiopsis alba ATCC BAA-2165   1 1
No Yes Streptomyces albus J1074   2 2
No Yes Streptomyces rapamycinicus NRRL 5491   11 7
No Yes Streptomyces davawensis JCM 4913   13 7
No Yes Streptomyces fulvissimus DSM 40593   2 2
No Yes Streptomyces venezuelae ATCC 10712   2 2
No Yes Streptomyces collinus Tu 365   7 4
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   14 7
No Yes Saccharothrix espanaensis DSM 44229   3 1
No Yes Amycolatopsis mediterranei RB   25 14
No Yes Amycolatopsis mediterranei S699   25 14
No Yes Amycolatopsis mediterranei S699   25 14
No Yes Amycolatopsis orientalis HCCB10007   8 5
No Yes Propionibacterium avidum 44067   3 2
No Yes Propionibacterium acnes ATCC 11828   5 3
No Yes Propionibacterium acnes TypeIA2 P.acn31   3 2
No Yes Propionibacterium acnes TypeIA2 P.acn17   3 2
No Yes Propionibacterium acnes TypeIA2 P.acn33   3 2
No Yes Propionibacterium acnes C1   5 3
No Yes Propionibacterium acnes HL096PA1   5 3
No Yes Propionibacterium acnes 6609   5 3
No Yes Propionibacterium acnes 266   5 3
No Yes Propionibacterium acnes KPA171202   5 3
No Yes Propionibacterium acidipropionici ATCC 4875   6 4
No Yes Actinoplanes friuliensis DSM 7358   7 6
No Yes Rhodococcus pyridinivorans SB3094   2 1
No Yes Rhodococcus erythropolis CCM2595   2 1
No Yes Leifsonia xyli subsp. cynodontis DSM 46306   2 2
No Yes Clavibacter michiganensis subsp. sepedonicus   6 4
No Yes Clavibacter michiganensis subsp. nebraskensis NCPPB 2581   5 3
No Yes Gardnerella vaginalis HMP9231   4 2
No Yes Gardnerella vaginalis ATCC 14019   4 2
No Yes Bifidobacterium longum NCC2705   2 1
No Yes Bifidobacterium longum DJO10A   2 1
No Yes Bifidobacterium longum subsp. infantis 157F   4 2
No Yes Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222   3 2
No Yes Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222   3 2
No Yes Bifidobacterium longum subsp. longum KACC 91563   2 1
No Yes Bifidobacterium longum subsp. longum BBMN68   2 1
No Yes Bifidobacterium longum subsp. longum F8   2 1
No Yes Bifidobacterium longum subsp. longum JCM 1217   2 1
No Yes Bifidobacterium animalis subsp. animalis ATCC 25527   4 2
No Yes Bifidobacterium animalis subsp. lactis Bl12   4 2
No Yes Bifidobacterium animalis subsp. lactis B420   4 2
No Yes Bifidobacterium animalis subsp. lactis ATCC 27673   3 2
No Yes Bifidobacterium animalis subsp. lactis BLC1   4 2
No Yes Bifidobacterium animalis subsp. lactis CNCM I-2494   4 2
No Yes Bifidobacterium animalis subsp. lactis Bi-07   4 2
No Yes Bifidobacterium animalis subsp. lactis V9   4 2
No Yes Bifidobacterium animalis subsp. lactis DSM 10140   4 2
No Yes Bifidobacterium animalis subsp. lactis BB-12   4 2
No Yes Bifidobacterium animalis subsp. lactis AD011   4 2
No Yes Bifidobacterium breve UCC2003   8 5
No Yes Bifidobacterium asteroides PRL2011   2 1
No Yes Bifidobacterium bifidum PRL2010   4 3
No Yes Bifidobacterium bifidum BGN4   4 3
No Yes Actinomyces odontolyticus ATCC 17982   4 3
No Yes Chthonomonas calidirosea T49   6 5
No Yes Deinococcus peraridilitoris DSM 19664   10 6
No Yes Erysipelothrix rhusiopathiae SY1027   1 1
No Yes Eubacterium siraeum V10Sc8a   3 3
No Yes Clostridium thermocellum DSM 1313   1 1
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532   6 5
No Yes Faecalibacterium prausnitzii L2-6   9 7
No Yes Desulfosporosinus meridiei DSM 13257   1 1
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   1 1
No Yes Desulfitobacterium hafniense DCB-2   1 1
No Yes Clostridium saccharolyticum Clostridium cf. saccharolyticum K10   2 1
No Yes Coprococcus catus GD/7   1 1
No Yes Roseburia intestinalis XB6B4   10 7
No Yes Candidatus Arthromitus sp. SFB-rat-Yit   2 1
No Yes Candidatus Arthromitus sp. SFB-mouse-Yit   2 1
No Yes Clostridium saccharobutylicum DSM 13864   2 1
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   5 4
No Yes Clostridium perfringens SM101   3 2
No Yes Clostridium perfringens str. 13   4 4
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   4 2
No Yes Thermoanaerobacterium thermosaccharolyticum M0795   4 2
No Yes Thermoanaerobacter sp. X513   1 1
No Yes Halobacteroides halobius DSM 5150   2 2
No Yes Melissococcus plutonius ATCC 35311   2 2
No Yes Enterococcus mundtii QU 25   2 2
No Yes Enterococcus casseliflavus EC20   5 4
No Yes Enterococcus faecium Aus0085   2 2
No Yes Enterococcus faecium NRRL B-2354   1 1
No Yes Enterococcus faecium DO   2 2
No Yes Enterococcus faecalis str. Symbioflor 1   2 1
No Yes Enterococcus faecalis D32   2 1
No Yes Enterococcus faecalis OG1RF   2 1
No Yes Enterococcus faecalis V583   2 1
No Yes Leuconostoc mesenteroides subsp. mesenteroides J18   2 1
No Yes Leuconostoc gelidum JB7   2 1
No Yes Lactobacillus paracasei subsp. paracasei 8700:2   2 1
No Yes Lactobacillus rhamnosus LOCK908   1 1
No Yes Lactobacillus rhamnosus LOCK900   1 1
No Yes Lactobacillus rhamnosus ATCC 8530   1 1
No Yes Lactobacillus rhamnosus GG   3 2
No Yes Lactobacillus rhamnosus GG   3 2
No Yes Lactobacillus johnsonii N6.2   1 1
No Yes Lactobacillus johnsonii DPC 6026   1 1
No Yes Lactobacillus johnsonii NCC 533   1 1
No Yes Lactobacillus salivarius UCC118   2 1
No Yes Lactobacillus fermentum F-6   1 1
No Yes Lactobacillus fermentum CECT 5716   1 1
No Yes Lactobacillus amylovorus GRL 1112   1 1
No Yes Lactobacillus reuteri TD1   1 1
No Yes Lactobacillus reuteri I5007   1 1
No Yes Lactobacillus reuteri JCM 1112   1 1
No Yes Lactobacillus reuteri SD2112   1 1
No Yes Lactobacillus plantarum 16   1 1
No Yes Lactobacillus plantarum ZJ316   1 1
No Yes Lactobacillus plantarum subsp. plantarum ST-III   1 1
No Yes Lactobacillus plantarum subsp. plantarum P-8   2 2
No Yes Lactobacillus plantarum WCFS1   1 1
No Yes Lactobacillus helveticus R0052   1 1
No Yes Lactobacillus helveticus H10   1 1
No Yes Lactobacillus helveticus CNRZ32   1 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus ND02   2 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842   2 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus 2038   2 1
No Yes Lactobacillus brevis KB290   2 2
No Yes Lactobacillus acidophilus La-14   1 1
No Yes Lactobacillus acidophilus NCFM   1 1
No Yes Pediococcus pentosaceus SL4   1 1
No Yes Lactococcus lactis subsp. lactis KLDS 4.0325   2 1
No Yes Lactococcus lactis subsp. lactis CV56   2 1
No Yes Lactococcus lactis subsp. lactis KF147   2 1
No Yes Lactococcus lactis subsp. lactis Il1403   2 1
No Yes Streptococcus constellatus subsp. pharyngis C1050   1 1
No Yes Streptococcus constellatus subsp. pharyngis C818   1 1
No Yes Streptococcus constellatus subsp. pharyngis C232   1 1
No Yes Streptococcus intermedius B196   1 1
No Yes Streptococcus intermedius C270   1 1
No Yes Streptococcus equi subsp. zooepidemicus ATCC 35246   2 2
No Yes Streptococcus equi subsp. zooepidemicus MGCS10565   2 2
No Yes Streptococcus equi subsp. zooepidemicus   2 2
No Yes Streptococcus dysgalactiae subsp. equisimilis 167   2 2
No Yes Streptococcus dysgalactiae subsp. equisimilis AC-2713   2 2
No Yes Streptococcus dysgalactiae subsp. equisimilis ATCC 12394   2 2
No Yes Streptococcus dysgalactiae subsp. equisimilis RE378   2 2
No Yes Streptococcus oligofermentans AS 1.3089   1 1
No Yes Streptococcus iniae SF1   1 1
No Yes Streptococcus parasanguinis FW213   2 2
No Yes Streptococcus pyogenes HSC5   1 1
No Yes Streptococcus pyogenes A20   1 1
No Yes Streptococcus pyogenes MGAS1882   1 1
No Yes Streptococcus pyogenes MGAS15252   1 1
No Yes Streptococcus pyogenes MGAS10750   1 1
No Yes Streptococcus pyogenes MGAS10270   2 2
No Yes Streptococcus pyogenes MGAS2096   1 1
No Yes Streptococcus pyogenes MGAS9429   1 1
No Yes Streptococcus pyogenes MGAS6180   1 1
No Yes Streptococcus pyogenes NZ131   1 1
No Yes Streptococcus pyogenes MGAS8232   1 1
No Yes Streptococcus pyogenes MGAS10394   1 1
No Yes Streptococcus pyogenes MGAS315   1 1
No Yes Streptococcus pyogenes SSI-1   1 1
No Yes Streptococcus pyogenes M1 476   1 1
No Yes Streptococcus pyogenes MGAS5005   1 1
No Yes Streptococcus pyogenes M1 GAS   1 1
No Yes Streptococcus pneumoniae A026   1 1
No Yes Streptococcus pneumoniae ST556   1 1
No Yes Streptococcus pneumoniae SPNA45   1 1
No Yes Streptococcus pneumoniae SPN994039   1 1
No Yes Streptococcus pneumoniae SPN994038   1 1
No Yes Streptococcus pneumoniae SPN034183   1 1
No Yes Streptococcus pneumoniae SPN034156   1 1
No Yes Streptococcus pneumoniae INV104   1 1
No Yes Streptococcus pneumoniae INV200   1 1
No Yes Streptococcus pneumoniae OXC141   1 1
No Yes Streptococcus pneumoniae gamPNI0373   1 1
No Yes Streptococcus pneumoniae AP200   1 1
No Yes Streptococcus pneumoniae ATCC 700669   1 1
No Yes Streptococcus pneumoniae TCH8431/19A   1 1
No Yes Streptococcus pneumoniae CGSP14   1 1
No Yes Streptococcus pneumoniae G54   1 1
No Yes Streptococcus pneumoniae JJA   1 1
No Yes Streptococcus pneumoniae 70585   2 2
No Yes Streptococcus pneumoniae Hungary19A-6   1 1
No Yes Streptococcus pneumoniae Taiwan19F-14   1 1
No Yes Streptococcus pneumoniae D39   1 1
No Yes Streptococcus pneumoniae 670-6B   1 1
No Yes Streptococcus pneumoniae R6   1 1
No Yes Streptococcus pneumoniae TIGR4   1 1
No Yes Streptococcus agalactiae ILRI112   1 1
No Yes Streptococcus agalactiae ILRI005   1 1
No Yes Streptococcus agalactiae 09mas018883   1 1
No Yes Streptococcus agalactiae 2-22   1 1
No Yes Streptococcus agalactiae GD201008-001   1 1
No Yes Streptococcus agalactiae NEM316   1 1
No Yes Streptococcus agalactiae 2603V/R   1 1
No Yes Streptococcus thermophilus MN-ZLW-002   2 1
No Yes Streptococcus thermophilus JIM 8232   2 1
No Yes Streptococcus thermophilus ND03   2 1
No Yes Streptococcus thermophilus CNRZ1066   2 1
No Yes Streptococcus thermophilus LMG 18311   2 1
No Yes Streptococcus suis T15   1 1
No Yes Streptococcus suis TL13   1 1
No Yes Streptococcus suis SC070731   1 1
No Yes Streptococcus suis S735   1 1
No Yes Streptococcus suis ST3   1 1
No Yes Streptococcus suis D9   1 1
No Yes Streptococcus suis SS12   1 1
No Yes Streptococcus suis D12   1 1
No Yes Streptococcus suis ST1   1 1
No Yes Streptococcus suis A7   1 1
No Yes Streptococcus suis JS14   1 1
No Yes Streptococcus suis BM407   1 1
No Yes Streptococcus suis SC84   1 1
No Yes Streptococcus suis GZ1   1 1
No Yes Streptococcus suis 98HAH33   1 1
No Yes Streptococcus suis 05ZYH33   1 1
No Yes Streptococcus salivarius CCHSS3   2 1
No Yes Streptococcus salivarius JIM8777   2 1
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1   2 1
No Yes Thermobacillus composti KWC4   13 7
No Yes Paenibacillus sp. Y412MC10   18 12
No Yes Paenibacillus mucilaginosus KNP414   23 15
No Yes Paenibacillus mucilaginosus K02   23 15
No Yes Paenibacillus polymyxa CR1   11 7
No Yes Paenibacillus polymyxa SC2   7 4
No Yes Paenibacillus polymyxa E681   5 2
No Yes Geobacillus sp. C56-T3   1 1
No Yes Geobacillus sp. Y4.1MC1   3 1
No Yes Geobacillus sp. Y412MC52   2 1
No Yes Geobacillus sp. Y412MC61   2 1
No Yes Amphibacillus xylanus NBRC 15112   7 4
No Yes Bacillus infantis NRRL B-14911   2 1
No Yes Bacillus megaterium WSH-002   2 1
No Yes Bacillus megaterium QM B1551   2 1
No Yes Staphylococcus pseudintermedius ED99   1 1
No Yes Staphylococcus warneri SG1   1 1
No Yes Rhodothermus marinus SG0.5JP17-172   2 2
No Yes Echinicola vietnamensis DSM 17526   22 14
No Yes Emticicia oligotrophica DSM 17448   1 1
No Yes Prevotella sp. oral taxon 299 str. F0039   5 3
No Yes Prevotella dentalis DSM 3688   10 8
No Yes Porphyromonas gingivalis TDC60   6 3
No Yes Porphyromonas gingivalis W83   6 3
No Yes Alistipes shahii WAL 8301   11 8
No Yes Bacteroides xylanisolvens XB1A   33 23
No Yes Bacteroides fragilis 638R   22 15
No Yes Bacteroides fragilis NCTC 9343   22 15
No Yes Nonlabens dokdonensis DSW-6   4 2
No Yes Fibrobacter succinogenes subsp. succinogenes S85   2 1
No Yes Singulisphaera acidiphila DSM 18658   1 1
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'   1 1
No Yes Brachyspira pilosicoli WesB   2 2
No Yes Brachyspira pilosicoli B2904   2 2
No Yes Brachyspira pilosicoli P43/6/78   3 2
No Yes Spirochaeta thermophila DSM 6578   3 2
No Yes Thermotoga maritima MSB8   4 3
No Yes Sorangium cellulosum So0157-2   2 2
No Yes Burkholderia phenoliruptrix BR3459a   2 1
No Yes Burkholderia sp. YI23   2 1
No Yes Burkholderia sp. CCGE1003   2 1
No Yes Burkholderia sp. CCGE1001   2 1
No Yes Burkholderia sp. KJ006   2 1
No Yes Burkholderia thailandensis MSMB121   1 1
No Yes Burkholderia pseudomallei MSHR305   1 1
No Yes Burkholderia pseudomallei NCTC 13179   1 1
No Yes Burkholderia pseudomallei BPC006   1 1
No Yes Burkholderia pseudomallei 1026b   1 1
No Yes Burkholderia pseudomallei MSHR346   1 1
No Yes Burkholderia pseudomallei 668   1 1
No Yes Burkholderia pseudomallei 1710b   1 1
No Yes Burkholderia pseudomallei K96243   1 1
No Yes Burkholderia mallei NCTC 10229   1 1
No Yes Burkholderia mallei NCTC 10247   1 1
No Yes Burkholderia mallei ATCC 23344   1 1
No Yes Burkholderia lata   5 2
No Yes Burkholderia ambifaria MC40-6   2 1
No Yes Burkholderia cenocepacia MC0-3   2 1
No Yes Burkholderia cenocepacia AU 1054   2 1
No Yes Burkholderia cenocepacia J2315   2 1
No Yes Burkholderia multivorans ATCC 17616   2 1
No Yes Burkholderia cepacia GG4   2 1
No Yes Sinorhizobium fredii USDA 257   3 2
No Yes Sinorhizobium fredii HH103   3 2
No Yes Sinorhizobium meliloti 2011   3 2
No Yes Sinorhizobium meliloti GR4   3 2
No Yes Sinorhizobium meliloti Rm41   3 2
No Yes Sinorhizobium meliloti SM11   3 2
No Yes Sinorhizobium meliloti BL225C   3 2
No Yes Sinorhizobium meliloti 1021   3 2
No Yes Rhizobium etli CFN 42   6 4
No Yes Rhizobium etli bv. mimosae str. Mim1   6 4
No Yes Rhizobium tropici CIAT 899   6 4
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   6 4
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   6 4
No Yes Simiduia agarivorans SA1 = DSM 21679   1 1
No Yes Mannheimia succiniciproducens MBEL55E   4 2
No Yes Haemophilus somnus 2336   1 1
No Yes Mannheimia haemolytica USMARC_2286   2 1
No Yes Mannheimia haemolytica M42548   2 1
No Yes Mannheimia haemolytica D174   2 1
No Yes Mannheimia haemolytica D153   2 1
No Yes Mannheimia haemolytica USDA-ARS-USMARC-183   2 1
No Yes Mannheimia haemolytica USDA-ARS-USMARC-185   2 1
No Yes Haemophilus parasuis ZJ0906   1 1
No Yes Actinobacillus suis H91-0380   2 1
No Yes Actinobacillus pleuropneumoniae serovar 3 str. JL03   2 1
No Yes Actinobacillus pleuropneumoniae serovar 7 str. AP76   2 1
No Yes Aeromonas hydrophila ML09-119   4 2
No Yes Vibrio fischeri ES114   5 2
No Yes Vibrio sp. EJY3   4 3
No Yes Vibrio parahaemolyticus BB22OP   5 2
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   2 1
No Yes Vibrio anguillarum Listonella anguillarum M3   2 1
No Yes Vibrio nigripulchritudo VibrioScope   2 1
No Yes Vibrio vulnificus CMCP6   7 3
No Yes Vibrio vulnificus YJ016   6 3
No Yes Vibrio cholerae LMA3984-4   2 1
No Yes Vibrio cholerae M66-2   2 1
No Yes Vibrio cholerae O395   2 1
No Yes Vibrio cholerae IEC224   2 1
No Yes Vibrio cholerae O1 str. 2010EL-1786   2 1
No Yes Vibrio cholerae MJ-1236   2 1
No Yes Shewanella baltica OS223   1 1
No Yes Glaciecola psychrophila 170   5 3
No Yes Alteromonas macleodii str. 'Ionian Sea UM4b'   4 3
No Yes Alteromonas macleodii str. 'Ionian Sea UM7'   4 3
No Yes Alteromonas macleodii str. 'Ionian Sea U8'   4 3
No Yes Alteromonas macleodii str. 'Ionian Sea U7'   4 3
No Yes Alteromonas macleodii str. 'Ionian Sea U4'   4 3
No Yes Alteromonas macleodii str. 'Aegean Sea MED64'   3 2
No Yes Alteromonas macleodii str. 'English Channel 615'   3 2
No Yes Alteromonas macleodii AltDE1   4 3
No Yes Alteromonas macleodii str. 'English Channel 673'   2 1
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   5 2
No Yes Alteromonas macleodii str. 'Black Sea 11'   3 2
No Yes Alteromonas macleodii ATCC 27126   2 1
No Yes Stenotrophomonas maltophilia D457   3 1
No Yes Stenotrophomonas maltophilia JV3   3 1
No Yes Stenotrophomonas maltophilia R551-3   3 1
No Yes Xylella fastidiosa subsp. fastidiosa GB514   3 1
No Yes Xylella fastidiosa M12   3 1
No Yes Xylella fastidiosa Temecula1   3 1
No Yes Xylella fastidiosa 9a5c   3 1
No Yes Xanthomonas citri subsp. citri Aw12879   9 5
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   8 4
No Yes Xanthomonas axonopodis pv. citrumelo F1   8 4
No Yes Xanthomonas axonopodis Xac29-1   8 4
No Yes Xanthomonas oryzae pv. oryzicola BLS256   4 2
No Yes Xanthomonas oryzae pv. oryzae MAFF 311018   4 2
No Yes Xanthomonas oryzae pv. oryzae KACC 10331   4 2
No Yes Xanthomonas campestris pv. raphani 756C   8 4
No Yes Xanthomonas campestris pv. campestris str. 8004   8 4
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   8 4
No Yes Morganella morganii subsp. morganii KT   2 1
No Yes Edwardsiella tarda C07-087   2 2
No Yes Edwardsiella tarda FL6-60   2 2
No Yes Rahnella aquatilis HX2   4 2
No Yes Yersinia pseudotuberculosis PB1/+   2 1
No Yes Yersinia pseudotuberculosis YPIII   2 1
No Yes Yersinia pseudotuberculosis IP 32953   2 1
No Yes Yersinia pestis biovar Microtus str. 91001   2 1
No Yes Yersinia pestis A1122   2 1
No Yes Yersinia pestis Z176003   2 1
No Yes Yersinia pestis D182038   2 1
No Yes Yersinia pestis D106004   2 1
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   2 1
No Yes Yersinia pestis Nepal516   2 1
No Yes Yersinia pestis Antiqua   2 1
No Yes Yersinia pestis Angola   2 1
No Yes Yersinia pestis CO92   2 1
No Yes Yersinia pestis KIM10+   2 1
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   2 1
No Yes Yersinia enterocolitica subsp. palearctica Y11   2 1
No Yes Serratia sp. AS13   2 1
No Yes Serratia plymuthica S13   2 1
No Yes Serratia plymuthica 4Rx13   2 1
No Yes Serratia marcescens FGI94   2 1
No Yes Serratia marcescens WW4   4 2
No Yes Serratia liquefaciens ATCC 27592   2 1
No Yes Dickeya dadantii Ech586   2 1
No Yes Dickeya dadantii 3937   2 1
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   2 1
No Yes Pantoea ananatis LMG 5342   2 1
No Yes Pantoea ananatis PA13   3 2
No Yes Pantoea ananatis AJ13355   2 1
No Yes Erwinia pyrifoliae DSM 12163   2 2
No Yes Erwinia amylovora CFBP1430   2 1
No Yes Cronobacter sakazakii CMCC 45402   5 3
No Yes Cronobacter sakazakii SP291   5 3
No Yes Cronobacter sakazakii ATCC BAA-894   3 2
No Yes Raoultella ornithinolytica B6   2 1
No Yes Shigella sonnei 53G   5 3
No Yes Shigella flexneri 2002017   3 2
No Yes Shigella flexneri 2a str. 2457T   3 2
No Yes Shigella flexneri 2a str. 301   3 2
No Yes Shigella dysenteriae 1617   6 5
No Yes Shigella boydii Sb227   2 1
No Yes Salmonella bongori N268-08   2 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   2 1
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Klebsiella oxytoca KCTC 1686   4 2
No Yes Klebsiella pneumoniae JM45   4 2
No Yes Klebsiella pneumoniae CG43   2 1
No Yes Klebsiella pneumoniae KCTC 2242   4 2
No Yes Klebsiella pneumoniae 342   3 2
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   3 2
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   2 2
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   4 2
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   2 2
No Yes Enterobacter aerogenes EA1509E   4 2
No Yes Escherichia coli E24377A   5 3
No Yes Escherichia coli E. coli PMV-1   5 3
No Yes Escherichia coli JJ1886   5 3
No Yes Escherichia coli LY180   5 3
No Yes Escherichia coli APEC O78   5 3
No Yes Escherichia coli O7:K1 str. CE10   5 3
No Yes Escherichia coli O104:H4 str. 2009EL-2050   5 3
No Yes Escherichia coli O104:H4 str. 2009EL-2071   5 3
No Yes Escherichia coli O104:H4 str. 2011C-3493   5 3
No Yes Escherichia coli NA114   5 3
No Yes Escherichia coli P12b   5 3
No Yes Escherichia coli str. 'clone D i2'   5 3
No Yes Escherichia coli str. 'clone D i14'   5 3
No Yes Escherichia coli UM146   5 3
No Yes Escherichia coli 042   5 3
No Yes Escherichia coli Xuzhou21   4 2
No Yes Escherichia coli IHE3034   5 3
No Yes Escherichia coli UMNK88   5 3
No Yes Escherichia coli O83:H1 str. NRG 857C   5 3
No Yes Escherichia coli ABU 83972   5 3
No Yes Escherichia coli KO11FL   5 3
No Yes Escherichia coli KO11FL   5 3
No Yes Escherichia coli LF82   5 3
No Yes Escherichia coli ED1a   5 3
No Yes Escherichia coli IAI39   5 3
No Yes Escherichia coli UMN026   5 3
No Yes Escherichia coli 55989   5 3
No Yes Escherichia coli S88   5 3
No Yes Escherichia coli IAI1   5 3
No Yes Escherichia coli W   5 3
No Yes Escherichia coli W   5 3
No Yes Escherichia coli DH1   5 3
No Yes Escherichia coli DH1   5 3
No Yes Escherichia coli ATCC 8739   5 3
No Yes Escherichia coli BL21(DE3)   5 3
No Yes Escherichia coli BL21(DE3)   5 3
No Yes Escherichia coli SMS-3-5   5 3
No Yes Escherichia coli SE15   5 3
No Yes Escherichia coli SE11   5 3
No Yes Escherichia coli APEC O1   5 3
No Yes Escherichia coli O103:H2 str. 12009   5 3
No Yes Escherichia coli UTI89   5 3
No Yes Escherichia coli 536   5 3
No Yes Escherichia coli HS   5 3
No Yes Escherichia coli ETEC H10407   5 3
No Yes Escherichia coli O55:H7 str. RM12579   5 3
No Yes Escherichia coli O55:H7 str. CB9615   5 3
No Yes Escherichia coli O26:H11 str. 11368   5 3
No Yes Escherichia coli CFT073   5 3
No Yes Escherichia coli O111:H- str. 11128   5 3
No Yes Escherichia coli O127:H6 str. E2348/69   5 3
No Yes Escherichia coli O157:H7 str. TW14359   4 2
No Yes Escherichia coli O157:H7 str. EC4115   4 2
No Yes Escherichia coli O157:H7 str. Sakai   4 2
No Yes Escherichia coli O157:H7 str. EDL933   5 3
No Yes Escherichia coli str. K-12 substr. MDS42   5 3
No Yes Escherichia coli BW2952   5 3
No Yes Escherichia coli str. K-12 substr. MG1655   5 3
No Yes Escherichia coli str. K-12 substr. W3110   5 3
No Yes Escherichia coli str. K-12 substr. DH10B   3 2
No Yes Escherichia coli B str. REL606   5 3
No Yes Enterobacter cloacae SCF1   5 3
No Yes Enterobacter cloacae EcWSU1   2 1
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   2 1
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   2 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   4 2
No Yes Sulfolobus islandicus LAL14/1   1 1
No Yes Sulfolobus islandicus REY15A   1 1
No Yes Sulfolobus islandicus HVE10/4   1 1
No Yes Sulfolobus islandicus Y.G.57.14   1 1
No Yes Sulfolobus islandicus L.S.2.15   1 1
No Yes Sulfolobus islandicus M.16.27   1 1
No Yes Sulfolobus islandicus M.14.25   1 1
No Yes Sulfolobus islandicus M.16.4   1 1
No Yes Sulfolobus islandicus L.D.8.5   1 1
No Yes Thermococcus sp. CL1   1 1
No Yes Halovivax ruber XH-70   1 1
No Yes Natrinema pellirubrum DSM 15624   1 1
No Yes Natronobacterium gregoryi SP2   1 1
No Yes Halorhabdus tiamatea SARL4B   6 4
No Yes Haloarcula hispanica N601   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 8 4
No Yes Homo sapiens (NCBI version) Human 8 6
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 4 2
No Yes Loa loa v3.3 (Request) Eye worm 2 2
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 1 1
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 2 2
No Yes Moniliophthora perniciosa FA553 (Genome survey)   4 4
No Yes Lotus japonicus (Early assembly)   3 3
No Yes Malus x domestica (Duplicate) Apple 11 4
No Yes Ricinus communis (Early assembly) Castor bean 6 3
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   7 3
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 5 2
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 5 2
No Yes Phoenix dactylifera (Early draft) Date palm 4 2
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   4 2
No Yes Homo sapiens 69_37 Human 4 2
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 5 3
No Yes Gorilla gorilla 69_3.1 Western gorilla 7 5
No Yes Pongo abelii 69_2 Sumatran orangutan 6 4
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 1 1
No Yes Macaca mulatta 69_1 Rhesus monkey 4 2
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 3 1
No Yes Otolemur garnettii 69_3 Small-eared galago 4 2
No Yes Microcebus murinus 69_1 Gray mouse lemur 3 2
No Yes Rattus norvegicus 69_3.4 Norway rat 3 2
No Yes Mus musculus 69_38 House mouse 4 2
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 2 1
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 4 2
No Yes Cavia porcellus 69_3 Domestic guinea pig 4 2
No Yes Oryctolagus cuniculus 69_2 Rabbit 4 2
No Yes Ochotona princeps 69 American pika 4 2
No Yes Tupaia belangeri 69 Northern tree shrew 2 1
No Yes Sus scrofa 69_10.2 Pig 5 3
No Yes Bos taurus 69_3.1 Cattle 4 2
No Yes Vicugna pacos 69_1 Alpaca 3 1
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 2 2
No Yes Mustela putorius furo 69_1.0 Domestic ferret 4 2
No Yes Ailuropoda melanoleuca 69_1 Giant panda 4 2
No Yes Canis familiaris 69_3.1 Dog 4 2
No Yes Felis catus 69 Domestic cat 3 2
No Yes Equus caballus 69_2 Horse 4 2
No Yes Myotis lucifugus 69_2.0 Little brown bat 4 2
No Yes Pteropus vampyrus 69_1 Large flying fox 3 2
No Yes Sorex araneus 69_1 European shrew 1 1
No Yes Erinaceus europaeus 69 Western European hedgehog 1 1
No Yes Procavia capensis 69_1 Cape rock hyrax 4 2
No Yes Loxodonta africana 69_3 African savanna elephant 4 2
No Yes Echinops telfairi 69 Small Madagascar hedgehog 4 2
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 3 2
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 4 2
No Yes Macropus eugenii 69_1.0 Tammar wallaby 2 2
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 3 2
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 3 2
No Yes Ornithorhynchus anatinus 69_5 Platypus 2 1
No Yes Petromyzon marinus 69_7.0 Sea lamprey 3 2
No Yes Meleagris gallopavo 69_2 Turkey 4 2
No Yes Gallus gallus 69_2 Chicken 4 2
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 4 2
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 4 2
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 3 2
No Yes Latimeria chalumnae 69_1 Coelacanth 3 2
No Yes Gadus morhua 69_1 Atlantic cod 4 2
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 4 2
No Yes Takifugu rubripes 69_4 Torafugu 2 2
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 4 2
No Yes Oryzias latipes 69_1 Japanese medaka 4 2
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 4 2
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 5 3
No Yes Danio rerio 69_9 Zebrafish 6 4
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 3 2
No Yes Ciona intestinalis 69 Vase tunicate 3 2
No Yes Drosophila melanogaster 69_5 Fruit fly 3 3
No Yes Caenorhabditis elegans 69_215 Roundworm 2 2
No Yes Arabidopsis thaliana 10 Thale cress 5 2
No Yes 1_050719N (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   10 8
No Yes 3_050719R (meta-genome)   12 12
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 4_050719Q (meta-genome)   16 15
No Yes 5_050719P (meta-genome)   26 25
No Yes 6_Upper_euphotic (meta-genome)   1 1
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   3 2
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   6 4
No Yes Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   17 13
No Yes Combined (meta-genome)   76 63
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   47 42
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   10 10
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   15 15
No Yes Dump bottom (Dump bottom) (meta-genome)   93 92
No Yes Dump top (Dump top) (meta-genome)   39 38
No Yes Endophytic microbiome from Rice (meta-genome)   6 6
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   6 6
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   5 4
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   3 2
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   14 14
No Yes Fungus garden combined (combined) (meta-genome)   26 24
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   55 51
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   58 52
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   8 7
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   4 4
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   7 6
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   7 7
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   13 13
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   11 11
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   10 10
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   6 6
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica), fosmids (meta-genome)   3 2
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   49 49
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   4 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   24 22
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   13 13
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   24 19
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   17 16
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   14 13
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   12 11
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   12 10
No Yes Human Gut Community Subject 7 (meta-genome)   19 18
No Yes Human Gut Community Subject 8 (meta-genome)   28 27
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   56 54
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   12 12
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   12 12
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   62 59
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   23 22
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   3 2
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   18 17
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   19 19
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   21 21
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   6 6
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   5 5
No Yes Mouse Gut Community lean1 (meta-genome)   2 2
No Yes Mouse Gut Community lean2 (meta-genome)   4 3
No Yes Mouse Gut Community lean3 (meta-genome)   1 1
No Yes Mouse Gut Community ob1 (meta-genome)   2 2
No Yes Mouse Gut Community ob2 (meta-genome)   5 5
No Yes NCBI 2017_08 genome   144246 92544
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   22 21
No Yes Protozoadb 2010_08 (Protozoadb)   16 12
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   19 19
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   7 7
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   15 12
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   2 2
No Yes Sludge/US, Jazz Assembly (meta-genome)   3 3
No Yes Sludge/US, Phrap Assembly (meta-genome)   5 4
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   28 28
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   88 88
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   61 60
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   48 48
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   45 45
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   32 32
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   51 51
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   11 10
No Yes STRING v9.0.5 (STRING)   1762 1147
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   6 6
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   20 20
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   1 1
No Yes Termite Protist Endosymbiont Community (meta-genome)   13 11
No Yes Uniprot 2018_03 genome   54460 36115
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   21 19
No Yes Global Ocean Sampling Expedition (GOS)   679 614
No Yes NCBI plasmid sequences (Plasmids)   100 71
No Yes NCBI viral sequences (Viral)   4 2
No Yes PDB chains (SCOP 1.75) (PDB)   25 11
No Yes Protein Data Bank (all PDB sequenc)   856 456
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   2314 2314
No Yes TargetDB (Targets)   80 64
No Yes The Salmonella enterica Pan-genome (meta-genome)   5 4
No Yes UniProt viral sequences (Viral)   3 2

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