Nucleic acid-binding proteins superfamily domain assignments
in
Saccharomyces cerevisiae SGD

Select to display	Genome		Domains	Proteins
No Yes	ALL		117147	117147
No Yes	Homo sapiens 49_36k (all transcripts)	Human	154	116
No Yes	Pan troglodytes 49_21h (all transcripts)	Chimpanzee	103	87
No Yes	Gorilla gorilla 52_1 (all transcripts)	Western Gorilla	58	46
No Yes	Pongo pygmaeus 49_1 (all transcripts)	Bornean orangutan	100	77
No Yes	Macaca mulatta 49_10h (all transcripts)	Rhesus monkey	132	108
No Yes	Callithrix jacchus 56_3 (all transcripts)	White-tufted-ear marmoset	182	138
No Yes	Otolemur garnettii 49_1c (all transcripts)	Small-eared galago	56	49
No Yes	Microcebus murinus 49_1 (all transcripts)	Gray mouse lemur	70	57
No Yes	Tarsius syrichta 51_1 (all transcripts)	Philippine tarsier	58	48
No Yes	Rattus norvegicus 49_34s (all transcripts)	Norway rat	159	126
No Yes	Mus musculus 49_37b (all transcripts)	House mouse	157	125
No Yes	Spermophilus tridecemlineatus 49_1e (all transcripts)	Thirteen-lined ground squirrel	52	44
No Yes	Dipodomys ordii 51_1 (all transcripts)	Ord's kangaroo rat	67	53
No Yes	Cavia porcellus 51_3 (all transcripts)	Domestic guinea pig	85	69
No Yes	Oryctolagus cuniculus 49_1f (all transcripts)	Rabbit	73	55
No Yes	Ochotona princeps 49_1 (all transcripts)	American pika	70	53
No Yes	Tupaia belangeri 49_1d (all transcripts)	Northern tree shrew	67	54
No Yes	Sus scrofa 56_9 (all transcripts)	Pig	88	61
No Yes	Bos taurus 49_3f (all transcripts)	Cattle	116	86
No Yes	Vicugna pacos 51_1 (all transcripts)	Alpaca	59	44
No Yes	Tursiops truncatus 51_1 (all transcripts)	Bottlenosed dolphin	78	61
No Yes	Canis familiaris 49_2g (all transcripts)	Dog	105	84
No Yes	Felis catus 49_1c (all transcripts)	Domestic cat	57	46
No Yes	Equus caballus 49_2 (all transcripts)	Horse	105	71
No Yes	Myotis lucifugus 49_1e (all transcripts)	Little brown bat	71	56
No Yes	Pteropus vampyrus 51_1 (all transcripts)	Large flying fox	79	60
No Yes	Sorex araneus 49_1c (all transcripts)	European shrew	59	44
No Yes	Erinaceus europaeus 49_1c (all transcripts)	Western European hedgehog	65	51
No Yes	Procavia capensis 51_1 (all transcripts)	Cape rock hyrax	63	54
No Yes	Loxodonta africana 49_1d (all transcripts)	African savanna elephant	57	44
No Yes	Echinops telfairi 49_1e (all transcripts)	Small Madagascar hedgehog	83	63
No Yes	Dasypus novemcinctus 49_1f (all transcripts)	Nine-banded armadillo	63	49
No Yes	Macropus eugenii 55_1 (all transcripts)	Tammar wallaby	63	50
No Yes	Monodelphis domestica 49_5d (all transcripts)	Gray short-tailed opossum	114	89
No Yes	Ornithorhynchus anatinus 49_1f (all transcripts)	Platypus	112	71
No Yes	Anolis carolinensis 55_1a (all transcripts)	Green anole	69	52
No Yes	Taeniopygia guttata 57_1c (all transcripts)	Zebra finch	77	66
No Yes	Meleagris gallopavo 57_2 (all transcripts)	Turkey	68	54
No Yes	Gallus gallus 49_2g (all transcripts)	Chicken	100	73
No Yes	Xenopus laevis	African clawed frog	243	199
No Yes	Xenopus tropicalis 49_41i (all transcripts)	Western clawed frog	96	71
No Yes	Danio rerio 49_7c (all transcripts)	Zebrafish	92	76
No Yes	Gasterosteus aculeatus 49_1f (all transcripts)	Three-spined stickleback	110	86
No Yes	Oryzias latipes 49_1e (all transcripts)	Japanese medaka	100	82
No Yes	Tetraodon nigroviridis 49_1k (all transcripts)	Spotted green pufferfish	85	63
No Yes	Takifugu rubripes 49_4i (all transcripts)	Torafugu	175	118
No Yes	Branchiostoma floridae 1.0	Florida lancelet	126	99
No Yes	Ciona savignyi 49_2f (all transcripts)		88	71
No Yes	Ciona intestinalis 49_2i (all transcripts)		82	70
No Yes	Strongylocentrotus purpuratus	Purple sea urchin	163	127
No Yes	Helobdella robusta		64	57
No Yes	Capitella sp. I		95	80
No Yes	Bombyx mori	Domestic silkworm	48	42
No Yes	Nasonia vitripennis	Jewel wasp	58	47
No Yes	Apis mellifera 37.2d (all transcripts) (Not maintained)	Honey bee	110	95
No Yes	Drosophila grimshawi 1.3		56	47
No Yes	Drosophila willistoni 1.3		61	52
No Yes	Drosophila pseudoobscura 2.3		60	50
No Yes	Drosophila persimilis 1.3		54	45
No Yes	Drosophila yakuba 1.3		63	51
No Yes	Drosophila simulans 1.3		51	44
No Yes	Drosophila sechellia 1.3		58	48
No Yes	Drosophila melanogaster Ensembl 49_54 (all transcripts)	Fruit fly	77	62
No Yes	Drosophila erecta 1.3		59	48
No Yes	Drosophila ananassae 1.3		65	52
No Yes	Drosophila virilis 1.2		56	48
No Yes	Drosophila mojavensis 1.3		61	48
No Yes	Aedes aegypti 49_1b (all transcripts)	Yellow fever mosquito	68	56
No Yes	Culex pipiens quinquefasciatus	Southern house mosquito	76	63
No Yes	Anopheles gambiae 49_3j (all transcripts)	African malaria mosquito	56	47
No Yes	Tribolium castaneum 3.0	Red flour beetle	66	54
No Yes	Pediculus humanus corporis (Early assembly)	Human body louse	61	49
No Yes	Acyrthosiphon pisum	Pea aphid	64	55
No Yes	Daphnia pulex	Common water flea	114	93
No Yes	Ixodes scapularis (Preliminary)	Black-legged tick	61	53
No Yes	Lottia gigantea		69	57
No Yes	Pristionchus pacificus		52	48
No Yes	Meloidogyne incognita	Southern root-knot nematode	60	55
No Yes	Meloidogyne hapla		45	43
No Yes	Brugia malayi	Agent of lymphatic filariasis	40	36
No Yes	Caenorhabditis japonica		46	44
No Yes	Caenorhabditis brenneri		57	52
No Yes	Caenorhabditis remanei		57	54
No Yes	Caenorhabditis elegans Ensembl 49_180a (all transcripts)	Nematode	96	87
No Yes	Caenorhabditis briggsae 2		58	55
No Yes	Schistosoma mansoni		74	66
No Yes	Nematostella vectensis 1.0	Starlet sea anemone	85	67
No Yes	Hydra magnipapillata		83	69
No Yes	Trichoplax adhaerens		64	52
No Yes	Proterospongia sp. ATCC 50818		60	50
No Yes	Monosiga brevicollis		50	41
No Yes	Capsaspora owczarzaki ATCC 30864		65	51
No Yes	Malassezia globosa CBS 7966		47	39
No Yes	Ustilago maydis		52	41
No Yes	Puccinia graminis f. sp. tritici CRL 75-36-700-3		47	41
No Yes	Melampsora laricis-populina		51	44
No Yes	Sporobolomyces roseus IAM 13481		43	36
No Yes	Serpula lacrymans var. lacrymans S7.9		44	35
No Yes	Coprinopsis cinerea okayama7 130		55	42
No Yes	Pleurotus ostreatus	Oyster mushroom	54	40
No Yes	Laccaria bicolor S238N-H82		52	41
No Yes	Agaricus bisporus var. bisporus		48	39
No Yes	Schizophyllum commune		52	40
No Yes	Heterobasidion annosum		49	39
No Yes	Phanerochaete chrysosporium RP-78 2.1		49	39
No Yes	Postia placenta		74	61
No Yes	Tremella mesenterica		49	40
No Yes	Cryptococcus neoformans JEC21		47	37
No Yes	Magnaporthe grisea 70-15		57	45
No Yes	Podospora anserina		59	46
No Yes	Sporotrichum thermophile ATCC 42464		55	42
No Yes	Thielavia terrestris NRRL 8126		56	43
No Yes	Chaetomium globosum CBS 148.51		47	36
No Yes	Neurospora tetrasperma		57	45
No Yes	Neurospora discreta FGSC 8579		51	39
No Yes	Neurospora crassa OR74A		58	46
No Yes	Cryphonectria parasitica	Chestnut blight fungus	55	43
No Yes	Fusarium oxysporum f. sp. lycopersici 4286		55	43
No Yes	Nectria haematococca mpVI		58	46
No Yes	Fusarium verticillioides 7600		55	43
No Yes	Fusarium graminearum		57	46
No Yes	Trichoderma atroviride		55	44
No Yes	Trichoderma reesei 1.2		56	44
No Yes	Trichoderma virens Gv29-8		57	45
No Yes	Verticillium dahliae VdLs.17		54	43
No Yes	Verticillium albo-atrum VaMs.102		54	43
No Yes	Botrytis cinerea B05.10		56	46
No Yes	Sclerotinia sclerotiorum		54	44
No Yes	Alternaria brassicicola		50	40
No Yes	Pyrenophora tritici-repentis		50	41
No Yes	Cochliobolus heterostrophus		50	40
No Yes	Stagonospora nodorum		49	38
No Yes	Mycosphaerella fijiensis CIRAD86		53	41
No Yes	Mycosphaerella graminicola IPO323		51	41
No Yes	Ajellomyces dermatitidis SLH14081		57	44
No Yes	Histoplasma capsulatum class NAmI strain WU24		48	42
No Yes	Microsporum gypseum		55	44
No Yes	Arthroderma benhamiae CBS 112371		49	40
No Yes	Microsporum canis CBS 113480		57	45
No Yes	Trichophyton equinum CBS 127.97		54	44
No Yes	Trichophyton verrucosum HKI 0517		50	40
No Yes	Trichophyton tonsurans CBS 112818		55	44
No Yes	Trichophyton rubrum CBS 118892		59	47
No Yes	Paracoccidioides brasiliensis Pb18		51	41
No Yes	Coccidioides posadasii RMSCC 3488		55	43
No Yes	Coccidioides immitis RS		54	43
No Yes	Uncinocarpus reesii 1704		54	43
No Yes	Aspergillus fumigatus Af293		53	42
No Yes	Neosartorya fischeri NRRL 181		53	42
No Yes	Penicillium chrysogenum Wisconsin 54-1255		55	43
No Yes	Penicillium marneffei ATCC 18224		63	49
No Yes	Aspergillus carbonarius ITEM 5010		53	42
No Yes	Aspergillus terreus NIH2624		56	44
No Yes	Aspergillus oryzae RIB40		52	40
No Yes	Aspergillus niger ATCC 1015		38	26
No Yes	Aspergillus flavus NRRL3357		57	46
No Yes	Aspergillus clavatus NRRL 1		55	44
No Yes	Aspergillus nidulans FGSC A4		57	45
No Yes	Tuber melanosporum Vittad	Perigord truffle	61	44
No Yes	Candida dubliniensis CD36		46	35
No Yes	Candida tropicalis MYA-3404		49	36
No Yes	Candida parapsilosis		45	34
No Yes	Candida albicans SC5314		45	34
No Yes	Yarrowia lipolytica CLIB122		47	39
No Yes	Candida lusitaniae ATCC 42720		41	32
No Yes	Vanderwaltozyma polyspora DSM 70294		48	38
No Yes	Candida glabrata CBS138		48	39
No Yes	Kluyveromyces thermotolerans CBS 6340		48	38
No Yes	Lachancea kluyveri		48	37
No Yes	Kluyveromyces waltii		46	36
No Yes	Lodderomyces elongisporus NRRL YB-4239		45	35
No Yes	Ashbya gossypii ATCC 10895		48	37
No Yes	Debaromyces hansenii		53	39
No Yes	Zygosaccharomyces rouxii		46	36
No Yes	Saccharomyces mikatae MIT		47	37
No Yes	Saccharomyces paradoxus MIT		50	39
No Yes	Saccharomyces cerevisiae SGD (SGD)	Baker's yeast	52	42
No Yes	Saccharomyces bayanus MIT		47	39
No Yes	Candida guilliermondii ATCC 6260		47	36
No Yes	Pichia stipitis CBS 6054		51	38
No Yes	Pichia pastoris GS115		51	40
No Yes	Kluyveromyces lactis		48	37
No Yes	Schizosaccharomyces octosporus yFS286		56	46
No Yes	Schizosaccharomyces japonicus yFS275		60	47
No Yes	Schizosaccharomyces pombe	Fission yeast	60	48
No Yes	Allomyces macrogynus ATCC 38327		102	89
No Yes	Rhizopus oryzae RA 99-880		69	60
No Yes	Phycomyces blakesleeanus		64	53
No Yes	Mucor circinelloides		64	54
No Yes	Encephalitozoon intestinalis		33	29
No Yes	Encephalitozoon cuniculi		35	31
No Yes	Spizellomyces punctatus DAOM BR117		69	53
No Yes	Batrachochytrium dendrobatidis JEL423		55	41
No Yes	Dictyostelium discoideum		57	51
No Yes	Dictyostelium purpureum		47	43
No Yes	Entamoeba dispar		47	40
No Yes	Entamoeba invadens		46	42
No Yes	Entamoeba histolytica 1		61	52
No Yes	Arabidopsis lyrata	Lyrate rockcress	471	338
No Yes	Arabidopsis thaliana 9 (all transcripts)	Thale cress	193	142
No Yes	Carica papaya	Papaya	98	78
No Yes	Medicago truncatula	Barrel medic	308	236
No Yes	Glycine max	Soybean	252	195
No Yes	Cucumis sativus	Cucumber	177	145
No Yes	Populus trichocarpa 1.1	Black cottonwood	193	160
No Yes	Vitis vinifera	Wine grape	148	117
No Yes	Brachypodium distachyon		187	142
No Yes	Oryza sativa ssp. japonica 5.0	Japanese rice	307	207
No Yes	Zea mays subsp. mays	Maize	306	249
No Yes	Sorghum bicolor	Sorghum	178	119
No Yes	Selaginella moellendorffii		256	180
No Yes	Physcomitrella patens subsp. patens		129	99
No Yes	Coccomyxa sp. C-169		82	58
No Yes	Chlorella sp. NC64A		77	60
No Yes	Chlorella vulgaris		81	57
No Yes	Volvox carteri f. nagariensis		69	55
No Yes	Chlamydomonas reinhardtii 4.0		72	56
No Yes	Ostreococcus sp. RCC809		89	64
No Yes	Ostreococcus lucimarinus CCE9901		89	63
No Yes	Ostreococcus tauri		80	59
No Yes	Micromonas sp. RCC299		89	67
No Yes	Micromonas pusilla CCMP1545		79	60
No Yes	Cyanidioschyzon merolae		59	51
No Yes	Giardia lamblia		26	24
No Yes	Trypanosoma cruzi strain CL Brener		77	75
No Yes	Trypanosoma brucei		50	47
No Yes	Leishmania mexicana		47	45
No Yes	Leishmania major strain Friedlin		47	45
No Yes	Leishmania infantum JPCM5		50	48
No Yes	Leishmania braziliensis MHOM/BR/75/M2904		50	48
No Yes	Aureococcus anophagefferens		77	62
No Yes	Phytophthora ramorum 1.1	Sudden oak death agent	68	55
No Yes	Phytophthora sojae 1.1		65	51
No Yes	Phytophthora infestans T30-4		68	52
No Yes	Phytophthora capsici		75	54
No Yes	Phaeodactylum tricornutum		67	60
No Yes	Fragilariopsis cylindrus		118	104
No Yes	Thalassiosira pseudonana		65	56
No Yes	Paramecium tetraurelia		137	122
No Yes	Tetrahymena thermophila SB210 1		64	52
No Yes	Babesia bovis T2Bo		44	39
No Yes	Theileria parva		47	41
No Yes	Theileria annulata		43	37
No Yes	Plasmodium falciparum 3D7		46	42
No Yes	Plasmodium vivax SaI-1		47	43
No Yes	Plasmodium knowlesi strain H		47	43
No Yes	Plasmodium yoelii ssp. yoelii 1		45	41
No Yes	Plasmodium chabaudi		55	52
No Yes	Plasmodium berghei ANKA		55	50
No Yes	Cryptosporidium hominis		30	26
No Yes	Cryptosporidium muris		40	34
No Yes	Cryptosporidium parvum Iowa II		36	32
No Yes	Neospora caninum Nc-Liverpool		61	50
No Yes	Neospora caninum		57	47
No Yes	Toxoplasma gondii ME49		63	53
No Yes	Naegleria gruberi		55	51
No Yes	Trichomonas vaginalis		79	64
No Yes	Guillardia theta		17	17
No Yes	Emiliania huxleyi CCMP1516		153	123
No Yes	Candidatus Phytoplasma mali		19	18
No Yes	Aster yellows witches-broom phytoplasma AYWB		22	21
No Yes	Onion yellows phytoplasma OY-M		31	30
No Yes	Acholeplasma laidlawii PG-8A		30	25
No Yes	Mesoplasma florum L1		20	19
No Yes	Ureaplasma parvum ser. 3 ATCC 700970		16	15
No Yes	Ureaplasma urealyticum ser. 10 ATCC 33699		15	14
No Yes	Mycoplasma mycoides ssp. mycoides SC PG1		21	20
No Yes	Mycoplasma capricolum ssp. capricolum ATCC 27343		21	20
No Yes	Mycoplasma crocodyli MP145		17	16
No Yes	Mycoplasma conjunctivae		17	16
No Yes	Mycoplasma penetrans HF-2		14	13
No Yes	Mycoplasma mobile 163K		16	15
No Yes	Mycoplasma arthritidis 158L3-1		18	17
No Yes	Mycoplasma agalactiae PG2		20	19
No Yes	Mycoplasma synoviae 53		16	15
No Yes	Mycoplasma pulmonis UAB CTIP		18	17
No Yes	Mycoplasma pneumoniae M129		15	14
No Yes	Mycoplasma hyopneumoniae 232		16	15
No Yes	Mycoplasma hominis		17	16
No Yes	Mycoplasma genitalium G37		14	13
No Yes	Mycoplasma gallisepticum R		13	12
No Yes	Aminobacterium colombiense DSM 12261		31	26
No Yes	Thermanaerovibrio acidaminovorans DSM 6589		27	22
No Yes	Brachyspira hyodysenteriae WA1		29	23
No Yes	Leptospira borgpetersenii ser. Hardjo-bovis L550		34	26
No Yes	Leptospira interrogans ser. Lai 56601		29	21
No Yes	Leptospira biflexa ser. Patoc Patoc 1 (Paris)		31	23
No Yes	Treponema pallidum ssp. pallidum Nichols		24	18
No Yes	Treponema denticola ATCC 35405		25	19
No Yes	Borrelia garinii PBi		20	15
No Yes	Borrelia afzelii PKo		20	15
No Yes	Borrelia burgdorferi B31		21	15
No Yes	Borrelia recurrentis A1		20	15
No Yes	Borrelia duttonii Ly		20	15
No Yes	Borrelia turicatae 91E135		20	15
No Yes	Borrelia hermsii DAH		20	15
No Yes	Rhodopirellula baltica SH 1		39	29
No Yes	Pirellula staleyi DSM 6068		32	24
No Yes	Gardnerella vaginalis 409-05		22	18
No Yes	Bifidobacterium longum NCC2705		25	21
No Yes	Bifidobacterium animalis ssp. lactis AD011		25	21
No Yes	Bifidobacterium dentium Bd1		23	19
No Yes	Bifidobacterium adolescentis ATCC 15703		22	19
No Yes	Kineococcus radiotolerans SRS30216		29	25
No Yes	Catenulispora acidiphila DSM 44928		43	39
No Yes	Stackebrandtia nassauensis DSM 44728		34	30
No Yes	Acidothermus cellulolyticus 11B		27	23
No Yes	Nakamurella multipartita DSM 44233		34	30
No Yes	Geodermatophilus obscurus DSM 43160		37	31
No Yes	Frankia sp. CcI3		28	24
No Yes	Frankia alni ACN14a		30	26
No Yes	Thermobifida fusca YX		25	21
No Yes	Thermomonospora curvata DSM 43183		37	32
No Yes	Streptosporangium roseum DSM 43021		43	35
No Yes	Streptomyces griseus ssp. griseus NBRC 13350		40	33
No Yes	Streptomyces avermitilis MA-4680		36	32
No Yes	Streptomyces scabiei 87.22		37	33
No Yes	Streptomyces coelicolor A3(2)		37	33
No Yes	Actinosynnema mirum DSM 43827		33	29
No Yes	Saccharomonospora viridis DSM 43017		29	25
No Yes	Saccharopolyspora erythraea NRRL 2338		38	34
No Yes	Kribbella flavida DSM 17836		34	30
No Yes	Nocardioides sp. JS614		32	28
No Yes	Propionibacterium acnes KPA171202		26	22
No Yes	Salinispora arenicola CNS-205		32	28
No Yes	Salinispora tropica CNB-440		32	28
No Yes	Gordonia bronchialis DSM 43247		32	28
No Yes	Rhodococcus jostii RHA1		38	34
No Yes	Rhodococcus opacus B4		36	32
No Yes	Rhodococcus erythropolis PR4		34	30
No Yes	Nocardia farcinica IFM 10152		39	35
No Yes	Mycobacterium abscessus		29	25
No Yes	Mycobacterium sp. MCS		33	29
No Yes	Mycobacterium avium ssp. paratuberculosis K-10		31	27
No Yes	Mycobacterium vanbaalenii PYR-1		32	28
No Yes	Mycobacterium tuberculosis H37Rv		30	26
No Yes	Mycobacterium bovis AF2122/97		30	26
No Yes	Mycobacterium ulcerans Agy99		33	29
No Yes	Mycobacterium gilvum PYR-GCK		33	29
No Yes	Mycobacterium marinum M		32	28
No Yes	Mycobacterium smegmatis MC2 155		32	28
No Yes	Mycobacterium leprae TN		25	21
No Yes	Corynebacterium aurimucosum		29	25
No Yes	Corynebacterium kroppenstedtii DSM 44385		27	23
No Yes	Corynebacterium efficiens YS-314		27	23
No Yes	Corynebacterium urealyticum DSM 7109		26	22
No Yes	Corynebacterium jeikeium K411		26	22
No Yes	Corynebacterium glutamicum ATCC 13032 Kitasato		28	24
No Yes	Corynebacterium diphtheriae NCTC 13129		28	24
No Yes	Tropheryma whipplei Twist		22	18
No Yes	Sanguibacter keddieii DSM 10542		32	25
No Yes	Kytococcus sedentarius DSM 20547		27	23
No Yes	Beutenbergia cavernae DSM 12333		29	25
No Yes	Leifsonia xyli ssp. xyli CTCB07		25	21
No Yes	Clavibacter michiganensis ssp. michiganensis NCPPB 382		26	22
No Yes	Jonesia denitrificans DSM 20603		28	24
No Yes	Brachybacterium faecium DSM 4810		26	22
No Yes	Xylanimonas cellulosilytica DSM 15894		37	30
No Yes	Kocuria rhizophila DC2201		26	22
No Yes	Rothia mucilaginosa DY-18		24	20
No Yes	Arthrobacter sp. FB24		30	26
No Yes	Arthrobacter chlorophenolicus A6		32	28
No Yes	Arthrobacter aurescens TC1		30	26
No Yes	Renibacterium salmoninarum ATCC 33209		25	21
No Yes	Micrococcus luteus NCTC 2665		25	21
No Yes	Cryptobacterium curtum DSM 15641		24	20
No Yes	Eggerthella lenta DSM 2243		31	26
No Yes	Slackia heliotrinireducens DSM 20476		28	24
No Yes	Atopobium parvulum DSM 20469		25	21
No Yes	Conexibacter woesei DSM 14684		33	29
No Yes	Rubrobacter xylanophilus DSM 9941		25	21
No Yes	Acidimicrobium ferrooxidans DSM 10331		22	18
No Yes	Denitrovibrio acetiphilus DSM 12809		28	22
No Yes	Deferribacter desulfuricans SSM1		28	22
No Yes	Kosmotoga olearia TBF 19.5.1		34	28
No Yes	Petrotoga mobilis SJ95		29	24
No Yes	Fervidobacterium nodosum Rt17-B1		29	24
No Yes	Thermosipho melanesiensis BI429		31	25
No Yes	Thermosipho africanus TCF52B		30	24
No Yes	Thermotoga lettingae TMO		29	24
No Yes	Thermotoga sp. RQ2		29	24
No Yes	Thermotoga naphthophila RKU-10		24	23
No Yes	Thermotoga petrophila RKU-1		29	24
No Yes	Thermotoga neapolitana DSM 4359		29	23
No Yes	Thermotoga maritima MSB8		29	23
No Yes	Dehalococcoides sp. CBDB1		18	16
No Yes	Dehalococcoides ethenogenes 195		20	18
No Yes	Thermomicrobium roseum DSM 5159		22	18
No Yes	Sphaerobacter thermophilus DSM 20745		25	21
No Yes	Herpetosiphon aurantiacus ATCC 23779		34	25
No Yes	Roseiflexus sp. RS-1		34	25
No Yes	Roseiflexus castenholzii DSM 13941		33	24
No Yes	Chloroflexus sp. Y-400-fl		35	26
No Yes	Chloroflexus aggregans DSM 9485		35	25
No Yes	Chloroflexus aurantiacus J-10-fl		35	26
No Yes	Sulfurihydrogenibium sp. YO3AOP1		27	21
No Yes	Sulfurihydrogenibium azorense Az-Fu1		28	22
No Yes	Persephonella marina EX-H1		28	22
No Yes	Hydrogenobaculum sp. Y04AAS1		25	20
No Yes	Thermocrinis albus DSM 14484		26	20
No Yes	Aquifex aeolicus VF5		28	23
No Yes	Hydrogenobacter thermophilus TK-6		26	20
No Yes	Gemmatimonas aurantiaca T-27		31	25
No Yes	Fibrobacter succinogenes ssp. succinogenes S85		27	21
No Yes	Candidatus Koribacter versatilis Ellin345		42	31
No Yes	Candidatus Solibacter usitatus Ellin6076		48	37
No Yes	Acidobacterium capsulatum ATCC 51196		38	31
No Yes	Elusimicrobium minutum Pei191		25	21
No Yes	uncultured Termite group 1 bacterium phylotype Rs-D17		19	18
No Yes	Pelodictyon phaeoclathratiforme BU-1		31	25
No Yes	Pelodictyon luteolum DSM 273		27	21
No Yes	Chlorobium chlorochromatii CaD3		28	22
No Yes	Chlorobium phaeobacteroides DSM 266		29	23
No Yes	Chlorobium phaeovibrioides DSM 265		30	24
No Yes	Chlorobium limicola DSM 245		28	22
No Yes	Chlorobaculum parvum NCIB 8327		27	21
No Yes	Chlorobium tepidum TLS		27	21
No Yes	Chloroherpeton thalassium ATCC 35110		31	25
No Yes	Prosthecochloris aestuarii DSM 271		29	23
No Yes	Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2		26	20
No Yes	Prevotella ruminicola 23		29	23
No Yes	Parabacteroides distasonis ATCC 8503		30	24
No Yes	Porphyromonas gingivalis W83		31	24
No Yes	Bacteroides vulgatus ATCC 8482		31	25
No Yes	Bacteroides thetaiotaomicron VPI-5482		33	27
No Yes	Bacteroides fragilis NCTC 9343		31	25
No Yes	Candidatus Amoebophilus asiaticus 5a2		28	22
No Yes	Salinibacter ruber DSM 13855		34	28
No Yes	Rhodothermus marinus DSM 4252		34	28
No Yes	Chitinophaga pinensis DSM 2588		37	31
No Yes	Dyadobacter fermentans DSM 18053		37	32
No Yes	Cytophaga hutchinsonii ATCC 33406		37	30
No Yes	Spirosoma linguale DSM 74		34	28
No Yes	Pedobacter heparinus DSM 2366		38	32
No Yes	Candidatus Sulcia muelleri GWSS		12	9
No Yes	Zunongwangia profunda SM-A87		47	41
No Yes	Gramella forsetii KT0803		41	35
No Yes	Robiginitalea biformata HTCC2501		33	27
No Yes	Flavobacteriaceae bacterium 3519-10		36	30
No Yes	Capnocytophaga ochracea DSM 7271		29	23
No Yes	Flavobacterium psychrophilum JIP02/86		33	27
No Yes	Flavobacterium johnsoniae UW101		40	34
No Yes	Blattabacterium sp. Bge		23	17
No Yes	Dictyoglomus turgidum DSM 6724		24	19
No Yes	Dictyoglomus thermophilum H-6-12		24	19
No Yes	Candidatus Protochlamydia amoebophila UWE25		32	25
No Yes	Chlamydophila pneumoniae TW-183		24	17
No Yes	Chlamydophila caviae GPIC		24	17
No Yes	Chlamydophila felis Fe/C-56		24	17
No Yes	Chlamydophila abortus S26/3		24	17
No Yes	Chlamydia muridarum Nigg		24	17
No Yes	Chlamydia trachomatis D/UW-3/CX		24	17
No Yes	Coraliomargarita akajimensis DSM 45221		27	21
No Yes	Opitutus terrae PB90-1		32	26
No Yes	Methylacidiphilum infernorum V4		24	19
No Yes	Akkermansia muciniphila ATCC BAA-835		28	22
No Yes	Thermodesulfovibrio yellowstonii DSM 11347		26	20
No Yes	Streptobacillus moniliformis DSM 12112		27	22
No Yes	Sebaldella termitidis ATCC 33386		34	27
No Yes	Leptotrichia buccalis DSM 1135		28	21
No Yes	Fusobacterium nucleatum ssp. nucleatum ATCC 25586		29	24
No Yes	Thermobaculum terrenum ATCC BAA-798		23	19
No Yes	Deinococcus deserti VCD115		28	23
No Yes	Deinococcus geothermalis DSM 11300		30	25
No Yes	Deinococcus radiodurans R1		29	24
No Yes	Meiothermus ruber DSM 1279		31	26
No Yes	Thermus thermophilus HB27 (First sequenced)		31	26
No Yes	Natranaerobius thermophilus JW/NM-WN-LF		31	27
No Yes	Symbiobacterium thermophilum IAM 14863		29	25
No Yes	Anaerococcus prevotii DSM 20548		29	24
No Yes	Finegoldia magna ATCC 29328		35	30
No Yes	Clostridiales genomosp. BVAB3 UPII9-5		27	22
No Yes	Anaerocellum thermophilum DSM 6725		30	25
No Yes	Candidatus Desulforudis audaxviator MP104C		26	21
No Yes	Pelotomaculum thermopropionicum SI		31	26
No Yes	Desulfitobacterium hafniense Y51		31	27
No Yes	Desulfotomaculum reducens MI-1		40	34
No Yes	Desulfotomaculum acetoxidans DSM 771		33	28
No Yes	Eubacterium rectale ATCC 33656		35	31
No Yes	Eubacterium eligens ATCC 27750		31	27
No Yes	Syntrophomonas wolfei ssp. wolfei Goettingen		25	21
No Yes	Heliobacterium modesticaldum Ice1		26	22
No Yes	Alkaliphilus oremlandii OhILAs		36	32
No Yes	Alkaliphilus metalliredigens QYMF		40	36
No Yes	Clostridium phytofermentans ISDg		44	38
No Yes	Clostridium novyi NT		39	33
No Yes	Clostridium kluyveri DSM 555		41	35
No Yes	Clostridium cellulolyticum H10		34	30
No Yes	Clostridium beijerinckii NCIMB 8052		39	32
No Yes	Clostridium thermocellum ATCC 27405		31	27
No Yes	Clostridium tetani E88		32	26
No Yes	Clostridium perfringens 13		35	30
No Yes	Clostridium difficile 630		38	34
No Yes	Clostridium botulinum A ATCC 3502		44	37
No Yes	Clostridium acetobutylicum ATCC 824		41	36
No Yes	Veillonella parvula DSM 2008		28	24
No Yes	Acidaminococcus fermentans DSM 20731		32	27
No Yes	Caldicellulosiruptor saccharolyticus DSM 8903		33	27
No Yes	Coprothermobacter proteolyticus DSM 5265		25	19
No Yes	Carboxydothermus hydrogenoformans Z-2901		27	23
No Yes	Moorella thermoacetica ATCC 39073		30	25
No Yes	Ammonifex degensii KC4		27	22
No Yes	Thermoanaerobacter pseudethanolicus ATCC 33223		34	30
No Yes	Thermoanaerobacter sp. X514		33	29
No Yes	Thermoanaerobacter tengcongensis MB4		35	30
No Yes	Thermoanaerobacter italicus Ab9		28	27
No Yes	Halothermothrix orenii H 168		34	30
No Yes	Enterococcus faecalis V583		40	36
No Yes	Oenococcus oeni PSU-1		22	21
No Yes	Leuconostoc citreum KM20		32	28
No Yes	Leuconostoc mesenteroides ssp. mesenteroides ATCC 8293		35	31
No Yes	Lactobacillus casei ATCC 334		37	32
No Yes	Lactobacillus crispatus ST1		31	26
No Yes	Lactobacillus rhamnosus GG		38	33
No Yes	Lactobacillus johnsonii NCC 533		31	26
No Yes	Lactobacillus salivarius UCC118		35	30
No Yes	Lactobacillus fermentum IFO 3956		32	28
No Yes	Lactobacillus sakei ssp. sakei 23K		36	31
No Yes	Lactobacillus reuteri DSM 20016		31	27
No Yes	Lactobacillus gasseri ATCC 33323		32	27
No Yes	Lactobacillus plantarum WCFS1		35	31
No Yes	Lactobacillus helveticus DPC 4571		33	28
No Yes	Lactobacillus delbrueckii ssp. bulgaricus ATCC 11842		32	27
No Yes	Lactobacillus brevis ATCC 367		32	28
No Yes	Lactobacillus acidophilus NCFM		31	26
No Yes	Pediococcus pentosaceus ATCC 25745		36	31
No Yes	Lactococcus lactis ssp. lactis Il1403		37	33
No Yes	Streptococcus gallolyticus UCN34		34	29
No Yes	Streptococcus equi ssp. zooepidemicus MGCS10565		33	29
No Yes	Streptococcus dysgalactiae ssp. equisimilis GGS_124		34	30
No Yes	Streptococcus mitis B6		32	27
No Yes	Streptococcus uberis 0140J		34	30
No Yes	Streptococcus pyogenes M1 GAS		31	27
No Yes	Streptococcus pneumoniae TIGR4 (Virulent)		31	27
No Yes	Streptococcus agalactiae NEM316		36	32
No Yes	Streptococcus mutans UA159		32	28
No Yes	Streptococcus thermophilus LMG 18311 (Older strain)		33	29
No Yes	Streptococcus suis 05ZYH33		33	31
No Yes	Streptococcus sanguinis SK36		32	28
No Yes	Streptococcus gordonii Challis subCH1		33	29
No Yes	Exiguobacterium sp. AT1b		36	31
No Yes	Exiguobacterium sibiricum 255-15		40	36
No Yes	Bacillus tusciae DSM 2912		29	25
No Yes	Alicyclobacillus acidocaldarius ssp. acidocaldarius DSM 446		31	27
No Yes	Brevibacillus brevis NBRC 100599		42	37
No Yes	Paenibacillus sp. JDR-2		35	31
No Yes	Listeria welshimeri ser. 6b SLCC5334		37	33
No Yes	Listeria innocua Clip11262		39	35
No Yes	Listeria seeligeri ser. 1/2b SLCC3954		32	31
No Yes	Listeria monocytogenes EGD-e		38	34
No Yes	Lysinibacillus sphaericus C3-41		37	33
No Yes	Oceanobacillus iheyensis HTE831		35	31
No Yes	Anoxybacillus flavithermus WK1		33	29
No Yes	Geobacillus sp. WCH70		35	31
No Yes	Geobacillus thermodenitrificans NG80-2		34	30
No Yes	Geobacillus kaustophilus HTA426		34	30
No Yes	Bacillus subtilis ssp. subtilis 168		38	34
No Yes	Bacillus licheniformis ATCC 14580		38	34
No Yes	Bacillus amyloliquefaciens FZB42		36	32
No Yes	Bacillus halodurans C-125		36	32
No Yes	Bacillus weihenstephanensis KBAB4		44	40
No Yes	Bacillus thuringiensis ser. konkukian 97-27		43	39
No Yes	Bacillus cereus ATCC 14579		42	38
No Yes	Bacillus anthracis Ames Ancestor		43	39
No Yes	Bacillus pseudofirmus OF4		38	34
No Yes	Bacillus clausii KSM-K16		36	33
No Yes	Bacillus pumilus SAFR-032		35	31
No Yes	Bacillus megaterium QM B1551		49	45
No Yes	Macrococcus caseolyticus JCSC5402		37	32
No Yes	Staphylococcus saprophyticus ssp. saprophyticus ATCC 15305		34	29
No Yes	Staphylococcus lugdunensis HKU09-01		34	29
No Yes	Staphylococcus haemolyticus JCSC1435		34	29
No Yes	Staphylococcus epidermidis RP62A		35	30
No Yes	Staphylococcus carnosus ssp. carnosus TM300		34	29
No Yes	Staphylococcus aureus ssp. aureus NCTC 8325		36	31
No Yes	Nautilia profundicola AmH		19	15
No Yes	Sulfurospirillum deleyianum DSM 6946		26	20
No Yes	Arcobacter butzleri RM4018		24	19
No Yes	Campylobacter hominis ATCC BAA-381		24	18
No Yes	Campylobacter lari RM2100		24	18
No Yes	Campylobacter curvus 525.92		24	18
No Yes	Campylobacter concisus 13826		21	15
No Yes	Campylobacter jejuni ssp. jejuni NCTC 11168		23	17
No Yes	Campylobacter fetus ssp. fetus 82-40		23	17
No Yes	Sulfurimonas denitrificans DSM 1251		23	18
No Yes	Wolinella succinogenes DSM 1740		20	15
No Yes	Helicobacter hepaticus ATCC 51449		21	15
No Yes	Helicobacter mustelae 12198		21	15
No Yes	Helicobacter acinonychis Sheeba		21	15
No Yes	Helicobacter pylori 26695		21	15
No Yes	Nitratiruptor sp. SB155-2		22	16
No Yes	Sulfurovum sp. NBC37-1		22	17
No Yes	Bdellovibrio bacteriovorus HD100		37	27
No Yes	Syntrophus aciditrophicus SB		33	27
No Yes	Syntrophobacter fumaroxidans MPOB		35	29
No Yes	Desulfotalea psychrophila LSv54		39	30
No Yes	Desulfatibacillum alkenivorans AK-01		33	27
No Yes	Desulfobacterium autotrophicum HRM2		45	34
No Yes	Desulfococcus oleovorans Hxd3		36	26
No Yes	Desulfohalobium retbaense DSM 5692		27	21
No Yes	Desulfomicrobium baculatum DSM 4028		35	25
No Yes	Lawsonia intracellularis PHE/MN1-00		26	20
No Yes	Desulfovibrio magneticus RS-1		34	24
No Yes	Desulfovibrio vulgaris Hildenborough		35	25
No Yes	Desulfovibrio salexigens DSM 2638		36	26
No Yes	Desulfovibrio desulfuricans ssp. desulfuricans G20		34	24
No Yes	Pelobacter propionicus DSM 2379		39	29
No Yes	Pelobacter carbinolicus DSM 2380		41	32
No Yes	Geobacter uraniireducens Rf4		42	32
No Yes	Geobacter sp. FRC-32		42	32
No Yes	Geobacter lovleyi SZ		35	28
No Yes	Geobacter bemidjiensis Bem		43	33
No Yes	Geobacter sulfurreducens PCA		40	29
No Yes	Geobacter metallireducens GS-15		39	28
No Yes	Haliangium ochraceum DSM 14365		36	27
No Yes	Sorangium cellulosum So ce 56		42	31
No Yes	Anaeromyxobacter sp. Fw109-5		47	37
No Yes	Anaeromyxobacter dehalogenans 2CP-C		44	35
No Yes	Myxococcus xanthus DK 1622		44	34
No Yes	Magnetococcus sp. MC-1		33	27
No Yes	Sideroxydans lithotrophicus ES-1		35	29
No Yes	Aromatoleum aromaticum EbN1		38	32
No Yes	Dechloromonas aromatica RCB		37	31
No Yes	Thauera sp. MZ1T		38	31
No Yes	Laribacter hongkongensis HLHK9		36	30
No Yes	Chromobacterium violaceum ATCC 12472		35	29
No Yes	Neisseria meningitidis Z2491		30	24
No Yes	Neisseria gonorrhoeae FA 1090		30	24
No Yes	Methylotenera mobilis JLW8		32	27
No Yes	Methylovorus sp. SIP3-4		36	30
No Yes	Methylobacillus flagellatus KT		44	33
No Yes	Thiobacillus denitrificans ATCC 25259		37	30
No Yes	Candidatus Accumulibacter phosphatis clade IIA UW-1		36	28
No Yes	Methylibium petroleiphilum PM1		38	32
No Yes	Leptothrix cholodnii SP-6		37	31
No Yes	Ralstonia eutropha JMP134		42	36
No Yes	Cupriavidus taiwanensis		41	35
No Yes	Ralstonia metallidurans CH34		39	33
No Yes	Ralstonia pickettii 12J		38	32
No Yes	Ralstonia solanacearum GMI1000		35	29
No Yes	Polynucleobacter necessarius ssp. asymbioticus QLW-P1DMWA-1		32	25
No Yes	Burkholderia phytofirmans PsJN		41	35
No Yes	Burkholderia phymatum STM815		41	35
No Yes	Burkholderia thailandensis E264		34	28
No Yes	Burkholderia pseudomallei K96243		37	31
No Yes	Burkholderia mallei ATCC 23344		35	29
No Yes	Burkholderia sp. 383		37	31
No Yes	Burkholderia ambifaria AMMD		40	34
No Yes	Burkholderia cenocepacia AU 1054		40	34
No Yes	Burkholderia multivorans ATCC 17616		38	32
No Yes	Burkholderia vietnamiensis G4		39	33
No Yes	Burkholderia xenovorans LB400		43	37
No Yes	Burkholderia glumae BGR1		40	34
No Yes	Verminephrobacter eiseniae EF01-2		33	27
No Yes	Delftia acidovorans SPH-1		38	32
No Yes	Polaromonas sp. JS666		35	29
No Yes	Polaromonas naphthalenivorans CJ2		34	28
No Yes	Variovorax paradoxus S110		33	27
No Yes	Rhodoferax ferrireducens T118		33	27
No Yes	Diaphorobacter sp. TPSY		35	29
No Yes	Acidovorax sp. JS42		39	33
No Yes	Acidovorax citrulli AAC00-1		38	32
No Yes	Comamonas sp. CNB-1		37	31
No Yes	Herminiimonas arsenicoxydans		36	30
No Yes	Janthinobacterium sp. Marseille		34	28
No Yes	Bordetella petrii DSM 12804		44	38
No Yes	Bordetella avium 197N		37	31
No Yes	Bordetella pertussis Tohama I		37	31
No Yes	Bordetella parapertussis 12822		38	32
No Yes	Bordetella bronchiseptica RB50		39	33
No Yes	Nitrosospira multiformis ATCC 25196		36	29
No Yes	Nitrosomonas eutropha C91		31	25
No Yes	Nitrosomonas europaea ATCC 19718		32	25
No Yes	Caulobacter sp. K31		34	26
No Yes	Caulobacter crescentus CB15		30	24
No Yes	Caulobacter segnis ATCC 21756		29	21
No Yes	Phenylobacterium zucineum HLK1		37	29
No Yes	Erythrobacter litoralis HTCC2594		34	27
No Yes	Sphingopyxis alaskensis RB2256		30	23
No Yes	Novosphingobium aromaticivorans DSM 12444		31	24
No Yes	Sphingobium japonicum UT26S		33	26
No Yes	Sphingomonas wittichii RW1		33	25
No Yes	Zymomonas mobilis ssp. mobilis ZM4		27	19
No Yes	Maricaulis maris MCS10		30	23
No Yes	Hirschia baltica ATCC 49814		31	24
No Yes	Hyphomonas neptunium ATCC 15444		32	25
No Yes	Dinoroseobacter shibae DFL 12		31	24
No Yes	Jannaschia sp. CCS1		31	24
No Yes	Ruegeria sp. TM1040		30	23
No Yes	Ruegeria pomeroyi DSS-3		28	21
No Yes	Roseobacter denitrificans OCh 114		32	25
No Yes	Rhodobacter sphaeroides 2.4.1		38	30
No Yes	Rhodobacter capsulatus SB1003		32	25
No Yes	Paracoccus denitrificans PD1222		39	31
No Yes	Magnetospirillum magneticum AMB-1		31	24
No Yes	Rhodospirillum centenum SW		31	24
No Yes	Rhodospirillum rubrum ATCC 11170		33	26
No Yes	Azospirillum sp. B510		30	22
No Yes	Granulibacter bethesdensis CGDNIH1		30	24
No Yes	Gluconacetobacter diazotrophicus PAl 5		31	24
No Yes	Gluconobacter oxydans 621H		26	19
No Yes	Acetobacter pasteurianus IFO 3283-01		27	20
No Yes	alpha proteobacterium IMCC1322		29	22
No Yes	Candidatus Pelagibacter ubique HTCC1062		24	18
No Yes	Neorickettsia sennetsu Miyayama		20	16
No Yes	Neorickettsia risticii Illinois		21	16
No Yes	Ehrlichia chaffeensis Arkansas		25	19
No Yes	Ehrlichia canis Jake		24	18
No Yes	Ehrlichia ruminantium Welgevonden		23	18
No Yes	Anaplasma phagocytophilum HZ		24	19
No Yes	Anaplasma marginale St. Maries		23	18
No Yes	Anaplasma centrale Israel		23	18
No Yes	Orientia tsutsugamushi Boryong		22	17
No Yes	Rickettsia bellii RML369-C		24	18
No Yes	Rickettsia canadensis McKiel		24	18
No Yes	Rickettsia typhi Wilmington		23	17
No Yes	Rickettsia prowazekii Madrid E		23	17
No Yes	Rickettsia peacockii Rustic		24	18
No Yes	Rickettsia felis URRWXCal2		24	18
No Yes	Rickettsia massiliae MTU5		24	18
No Yes	Rickettsia africae ESF-5		24	18
No Yes	Rickettsia akari Hartford		24	18
No Yes	Rickettsia rickettsii Sheila Smith		18	17
No Yes	Rickettsia conorii Malish 7		24	18
No Yes	Wolbachia endosymbiont of Culex_quinquefasciatus Pel		24	18
No Yes	Wolbachia endosymbiont of Drosophila melanogaster (Genus only)		23	17
No Yes	Wolbachia endosymbiont TRS of Brugia malayi		23	17
No Yes	Wolbachia sp. wRi		23	17
No Yes	Xanthobacter autotrophicus Py2		34	26
No Yes	Azorhizobium caulinodans ORS 571		35	27
No Yes	Methylobacterium chloromethanicum CM4		35	27
No Yes	Methylobacterium extorquens PA1		37	29
No Yes	Methylobacterium sp. 4-46		32	24
No Yes	Methylobacterium populi BJ001		34	26
No Yes	Methylobacterium nodulans ORS 2060		34	26
No Yes	Methylobacterium radiotolerans JCM 2831		32	24
No Yes	Candidatus Hodgkinia cicadicola Dsem		5	5
No Yes	Ochrobactrum anthropi ATCC 49188		35	28
No Yes	Brucella microti CCM 4915		32	25
No Yes	Brucella canis ATCC 23365		31	24
No Yes	Brucella suis 1330		31	24
No Yes	Brucella melitensis bv. 1 16M		32	25
No Yes	Brucella ovis ATCC 25840		31	24
No Yes	Brucella abortus bv. 1 9-941		31	24
No Yes	Sinorhizobium medicae WSM419		38	31
No Yes	Sinorhizobium meliloti 1021		36	29
No Yes	Rhizobium etli CFN 42		38	31
No Yes	Rhizobium sp. NGR234		35	28
No Yes	Rhizobium leguminosarum bv. viciae 3841		37	30
No Yes	Agrobacterium vitis S4		35	28
No Yes	Agrobacterium radiobacter K84		37	30
No Yes	Agrobacterium tumefaciens C58		36	29
No Yes	Candidatus Liberibacter asiaticus psy62		27	21
No Yes	Chelativorans sp. BNC1		39	32
No Yes	Parvibaculum lavamentivorans DS-1		31	24
No Yes	Mesorhizobium loti MAFF303099		41	33
No Yes	Methylocella silvestris BL2		37	28
No Yes	Beijerinckia indica ssp. indica ATCC 9039		40	31
No Yes	Oligotropha carboxidovorans OM5		35	28
No Yes	Rhodopseudomonas palustris CGA009		35	28
No Yes	Nitrobacter winogradskyi Nb-255		33	26
No Yes	Nitrobacter hamburgensis X14		45	38
No Yes	Bradyrhizobium sp. ORS278		36	29
No Yes	Bradyrhizobium japonicum USDA 110		44	37
No Yes	Bartonella tribocorum CIP 105476		33	26
No Yes	Bartonella henselae Houston-1		30	23
No Yes	Bartonella grahamii as4aup		31	24
No Yes	Bartonella quintana Toulouse		27	20
No Yes	Bartonella bacilliformis KC583		29	22
No Yes	Acidithiobacillus ferrooxidans ATCC 23270		32	25
No Yes	Mannheimia succiniciproducens MBEL55E		34	28
No Yes	Aggregatibacter aphrophilus NJ8700		35	29
No Yes	Aggregatibacter actinomycetemcomitans D11S-1		34	28
No Yes	Haemophilus somnus 129PT		34	28
No Yes	Pasteurella multocida ssp. multocida Pm70		33	27
No Yes	Haemophilus parasuis SH0165		32	26
No Yes	Haemophilus ducreyi 35000HP		34	28
No Yes	Haemophilus influenzae Rd KW20		32	26
No Yes	Actinobacillus succinogenes 130Z		32	26
No Yes	Actinobacillus pleuropneumoniae L20		33	27
No Yes	Tolumonas auensis DSM 9187		36	29
No Yes	Aeromonas salmonicida ssp. salmonicida A449		37	30
No Yes	Aeromonas hydrophila ssp. hydrophila ATCC 7966		38	31
No Yes	Aliivibrio salmonicida LFI1238		40	33
No Yes	Vibrio fischeri ES114		40	33
No Yes	Vibrio parahaemolyticus RIMD 2210633		42	35
No Yes	Vibrio harveyi ATCC BAA-1116		38	31
No Yes	Vibrio sp. Ex25		41	34
No Yes	Vibrio splendidus LGP32		41	34
No Yes	Vibrio vulnificus YJ016 (Good annotation)		41	34
No Yes	Vibrio cholerae O1 biov. El Tor N16961		39	32
No Yes	Photobacterium profundum SS9		45	38
No Yes	Psychromonas ingrahamii 37		48	40
No Yes	Idiomarina loihiensis L2TR		34	28
No Yes	Shewanella piezotolerans WP3		36	30
No Yes	Shewanella loihica PV-4		36	30
No Yes	Shewanella halifaxensis HAW-EB4		37	31
No Yes	Shewanella sediminis HAW-EB3		40	32
No Yes	Shewanella denitrificans OS217		36	30
No Yes	Shewanella pealeana ATCC 700345		37	31
No Yes	Shewanella oneidensis MR-1		37	31
No Yes	Shewanella baltica OS155		35	29
No Yes	Shewanella woodyi ATCC 51908		39	33
No Yes	Shewanella sp. MR-7		36	30
No Yes	Shewanella amazonensis SB2B		37	31
No Yes	Shewanella violacea DSS12		41	34
No Yes	Shewanella frigidimarina NCIMB 400		36	30
No Yes	Shewanella putrefaciens CN-32		35	29
No Yes	Colwellia psychrerythraea 34H		40	33
No Yes	Pseudoalteromonas atlantica T6c		39	31
No Yes	Pseudoalteromonas haloplanktis TAC125		44	37
No Yes	Teredinibacter turnerae T7901		33	27
No Yes	Saccharophagus degradans 2-40		39	31
No Yes	Marinobacter aquaeolei VT8		43	35
No Yes	Alteromonas macleodii Deep ecotype		37	30
No Yes	Hahella chejuensis KCTC 2396		40	32
No Yes	Alcanivorax borkumensis SK2		36	29
No Yes	Marinomonas sp. MWYL1		39	32
No Yes	Chromohalobacter salexigens DSM 3043		34	28
No Yes	Methylococcus capsulatus Bath		36	29
No Yes	Dichelobacter nodosus VCS1703A		30	24
No Yes	Stenotrophomonas maltophilia R551-3		37	29
No Yes	Xylella fastidiosa 9a5c		39	31
No Yes	Xanthomonas axonopodis pv. citri 306		39	31
No Yes	Xanthomonas albilineans		35	27
No Yes	Xanthomonas oryzae pv. oryzae KACC10331		37	29
No Yes	Xanthomonas campestris pv. campestris ATCC 33913 (Completed 2001)		41	33
No Yes	Halothiobacillus neapolitanus c2		30	24
No Yes	Alkalilimnicola ehrlichii MLHE-1		32	26
No Yes	Thioalkalivibrio sp. HL-EbGR7		34	28
No Yes	Halorhodospira halophila SL1		30	24
No Yes	Allochromatium vinosum DSM 180		41	32
No Yes	Nitrosococcus halophilus Nc4		34	27
No Yes	Nitrosococcus oceani ATCC 19707		30	23
No Yes	Coxiella burnetii RSA 493		28	21
No Yes	Legionella longbeachae NSW150		37	31
No Yes	Legionella pneumophila ssp. pneumophila Philadelphia 1		38	32
No Yes	Kangiella koreensis DSM 16069		34	27
No Yes	Baumannia cicadellinicola Hc		27	21
No Yes	Candidatus Carsonella ruddii PV		6	6
No Yes	Candidatus Vesicomyosocius okutanii HA		28	22
No Yes	Candidatus Ruthia magnifica Cm		26	20
No Yes	Cronobacter turicensis z3032		41	34
No Yes	Cronobacter sakazakii ATCC BAA-894		38	31
No Yes	Candidatus Riesia pediculicola USDA		24	18
No Yes	Dickeya zeae Ech1591		39	32
No Yes	Dickeya dadantii Ech703		38	31
No Yes	Candidatus Hamiltonella defensa 5AT		36	30
No Yes	Candidatus Blochmannia floridanus		22	17
No Yes	Pectobacterium wasabiae WPP163		41	34
No Yes	Pectobacterium atrosepticum SCRI1043		39	32
No Yes	Pectobacterium carotovorum ssp. carotovorum PC1		39	32
No Yes	Sodalis glossinidius morsitans		37	30
No Yes	Pantoea ananatis LMG 20103		40	33
No Yes	Wigglesworthia glossinidia		23	17
No Yes	Buchnera aphidicola APS		25	19
No Yes	Photorhabdus asymbiotica		41	34
No Yes	Photorhabdus luminescens ssp. laumondii TTO1		43	36
No Yes	Edwardsiella ictaluri 93-146		39	32
No Yes	Edwardsiella tarda EIB202		41	33
No Yes	Yersinia pseudotuberculosis IP 32953		43	36
No Yes	Yersinia pestis CO92		41	34
No Yes	Yersinia enterocolitica ssp. enterocolitica 8081		44	37
No Yes	Xenorhabdus bovienii SS-2004		45	38
No Yes	Shigella sonnei Ss046		43	36
No Yes	Shigella flexneri 2a 2457T		40	33
No Yes	Shigella dysenteriae Sd197		39	32
No Yes	Shigella boydii Sb227		42	35
No Yes	Serratia proteamaculans 568		44	37
No Yes	Salmonella enterica ssp. enterica ser. Typhimurium LT2		40	33
No Yes	Proteus mirabilis HI4320		44	37
No Yes	Klebsiella variicola At-22		40	33
No Yes	Klebsiella pneumoniae ssp. pneumoniae MGH 78578		40	33
No Yes	Escherichia fergusonii ATCC 35469		41	34
No Yes	Escherichia coli K-12 subMG1655		45	38
No Yes	Erwinia tasmaniensis Et1/99		38	31
No Yes	Erwinia pyrifoliae Ep1/96		39	32
No Yes	Erwinia amylovora ATCC 49946		39	32
No Yes	Enterobacter sp. 638		43	36
No Yes	Citrobacter rodentium ICC168		39	32
No Yes	Citrobacter koseri ATCC BAA-895		37	30
No Yes	Azotobacter vinelandii DJ		37	30
No Yes	Pseudomonas entomophila L48		37	31
No Yes	Pseudomonas syringae pv. tomato DC3000		39	33
No Yes	Pseudomonas stutzeri A1501		40	33
No Yes	Pseudomonas putida KT2440		40	34
No Yes	Pseudomonas fluorescens Pf-5		38	32
No Yes	Pseudomonas mendocina ymp		41	34
No Yes	Pseudomonas aeruginosa PAO1		39	32
No Yes	Cellvibrio japonicus Ueda107		34	28
No Yes	Psychrobacter sp. PRwf-1		31	25
No Yes	Psychrobacter arcticus 273-4		31	25
No Yes	Psychrobacter cryohalolentis K5		32	26
No Yes	Acinetobacter sp. ADP1		34	28
No Yes	Acinetobacter baumannii ATCC 17978		28	23
No Yes	Thiomicrospira crunogena XCL-2		34	27
No Yes	Francisella philomiragia ssp. philomiragia ATCC 25017		30	24
No Yes	Francisella tularensis ssp. tularensis SCHU S4		31	25
No Yes	Gloeobacter violaceus PCC 7421		29	26
No Yes	Acaryochloris marina MBIC11017		31	26
No Yes	Prochlorococcus marinus MIT 9313		27	22
No Yes	Nostoc punctiforme PCC 73102		32	26
No Yes	Nostoc sp. PCC 7120		29	24
No Yes	Anabaena variabilis ATCC 29413		30	25
No Yes	Trichodesmium erythraeum IMS101		28	23
No Yes	Thermosynechococcus elongatus BP-1		25	22
No Yes	cyanobacterium UCYN-A		25	22
No Yes	Cyanothece sp. ATCC 51142		31	26
No Yes	Synechocystis sp. PCC 6803		29	24
No Yes	Synechococcus elongatus PCC 6301		29	24
No Yes	Microcystis aeruginosa NIES-843		27	22
No Yes	Nitrosopumilus maritimus SCM1		19	17
No Yes	Nanoarchaeum equitans Kin4-M		12	12
No Yes	Candidatus Korarchaeum cryptofilum OPF8		23	21
No Yes	Methanocella paludicola SANAE		33	29
No Yes	Methanosaeta thermophila PT		26	21
No Yes	Methanococcoides burtonii DSM 6242		30	24
No Yes	Methanosarcina acetivorans C2A		38	30
No Yes	Methanosarcina mazei Go1		38	30
No Yes	Methanosarcina barkeri Fusaro		39	32
No Yes	Methanohalophilus mahii DSM 5219		25	20
No Yes	Methanosphaerula palustris E1-9c		23	18
No Yes	Candidatus Methanoregula boonei 6A8		24	19
No Yes	Methanospirillum hungatei JF-1		26	20
No Yes	Methanocorpusculum labreanum Z		22	16
No Yes	Methanoculleus marisnigri JR1		25	20
No Yes	Methanopyrus kandleri AV19		22	19
No Yes	Ferroglobus placidus DSM 10642		20	18
No Yes	Archaeoglobus profundus DSM 5631		22	21
No Yes	Archaeoglobus fulgidus DSM 4304		22	19
No Yes	Thermococcus onnurineus NA1		28	26
No Yes	Thermococcus kodakarensis KOD1		32	30
No Yes	Thermococcus gammatolerans EJ3		28	26
No Yes	Thermococcus sibiricus MM 739		27	25
No Yes	Pyrococcus horikoshii OT3		27	25
No Yes	Pyrococcus abyssi GE5		26	24
No Yes	Pyrococcus furiosus DSM 3638		27	25
No Yes	Thermoplasma volcanium GSS1		19	18
No Yes	Thermoplasma acidophilum DSM 1728		19	18
No Yes	Picrophilus torridus DSM 9790		22	20
No Yes	Haloquadratum walsbyi DSM 16790		36	30
No Yes	Halomicrobium mukohataei DSM 12286		36	29
No Yes	Halorhabdus utahensis DSM 12940		37	30
No Yes	Haloterrigena turkmenica DSM 5511		32	28
No Yes	Natronomonas pharaonis DSM 2160		37	30
No Yes	Natrialba magadii ATCC 43099		36	30
No Yes	Halorubrum lacusprofundi ATCC 49239		40	33
No Yes	Haloferax volcanii DS2		35	28
No Yes	Halobacterium salinarum R1		29	22
No Yes	Halobacterium sp. NRC-1		29	22
No Yes	Haloarcula marismortui ATCC 43049		40	33
No Yes	Methanocaldococcus sp. FS406-22		24	19
No Yes	Methanocaldococcus fervens AG86		25	20
No Yes	Methanocaldococcus vulcanius M7		24	19
No Yes	Methanocaldococcus jannaschii DSM 2661		26	21
No Yes	Methanococcus aeolicus Nankai-3		24	19
No Yes	Methanococcus maripaludis S2		26	20
No Yes	Methanococcus vannielii SB		26	20
No Yes	Methanothermobacter thermautotrophicus Delta H		24	20
No Yes	Methanosphaera stadtmanae DSM 3091		25	19
No Yes	Methanobrevibacter ruminantium M1		26	21
No Yes	Methanobrevibacter smithii ATCC 35061		25	20
No Yes	uncultured methanogenic archaeon RC-I		30	27
No Yes	Aciduliprofundum boonei T469		23	21
No Yes	Hyperthermus butylicus DSM 5456		17	17
No Yes	Aeropyrum pernix K1		16	16
No Yes	Ignicoccus hospitalis KIN4/I		16	16
No Yes	Staphylothermus marinus F1		17	17
No Yes	Desulfurococcus kamchatkensis 1221n		16	16
No Yes	Metallosphaera sedula DSM 5348		17	17
No Yes	Sulfolobus tokodaii 7		16	16
No Yes	Sulfolobus islandicus Y.N.15.51		16	16
No Yes	Sulfolobus solfataricus P2		16	16
No Yes	Sulfolobus acidocaldarius DSM 639		17	17
No Yes	Thermofilum pendens Hrk 5		20	20
No Yes	Caldivirga maquilingensis IC-167		16	16
No Yes	Pyrobaculum calidifontis JCM 11548		16	16
No Yes	Pyrobaculum arsenaticum DSM 13514		18	18
No Yes	Pyrobaculum aerophilum IM2		17	17
No Yes	Pyrobaculum islandicum DSM 4184		17	17
No Yes	Thermoproteus neutrophilus V24Sta		17	17
No Yes	Drosophila melanogaster FlyBase 5.12 (all transcripts) (FlyBase)	Fruit fly	77	62
No Yes	Caenorhabditis elegans WormBase WS194 (all transcripts) (WormBase)	Nematode	64	57
No Yes	Cryptococcus neoformans var. grubii H99		48	39
No Yes	Cryptococcus neoformans B-3501A		49	39
No Yes	Ajellomyces dermatitidis ER-3		57	44
No Yes	Histoplasma capsulatum H143		52	40
No Yes	Histoplasma capsulatum H88		54	44
No Yes	Histoplasma capsulatum G186AR		54	43
No Yes	Paracoccidioides brasiliensis Pb01		53	43
No Yes	Paracoccidioides brasiliensis Pb03		56	44
No Yes	Coccidioides posadasii str. Silveira		52	41
No Yes	Coccidioides immitis RMSCC 3703		48	38
No Yes	Coccidioides immitis RMSCC 2394		54	43
No Yes	Coccidioides immitis H538.4		51	41
No Yes	Aspergillus fumigatus A1163		54	43
No Yes	Candida albicans WO-1		45	34
No Yes	Saccharomyces cerevisiae YJM789		49	39
No Yes	Saccharomyces cerevisiae RM11-1a		51	41
No Yes	Saccharomyces cerevisiae Ensembl 49_1h (all transcripts)	Baker's yeast	52	42
No Yes	Schizosaccharomyces pombe 972h-		60	48
No Yes	Batrachochytrium dendrobatidis JAM81		57	44
No Yes	Oryza sativa ssp. Indica (Subspecies)	Indian rice	265	167
No Yes	Plasmodium falciparum HB3		45	41
No Yes	Plasmodium falciparum Dd2		37	35
No Yes	Candidatus Phytoplasma australiense		19	18
No Yes	Ureaplasma parvum ser. 3 ATCC 27815		16	15
No Yes	Mycoplasma agalactiae		22	21
No Yes	Mycoplasma hyopneumoniae 7448		16	15
No Yes	Mycoplasma hyopneumoniae J		15	14
No Yes	Leptospira borgpetersenii ser. Hardjo-bovis JB197		29	21
No Yes	Leptospira interrogans ser. Copenhageni Fiocruz L1-130		27	20
No Yes	Leptospira biflexa ser. Patoc Patoc 1 (Ames)		31	23
No Yes	Treponema pallidum ssp. pallidum SS14		23	17
No Yes	Borrelia burgdorferi ZS7		21	15
No Yes	Bifidobacterium longum ssp. infantis ATCC 15697		28	24
No Yes	Bifidobacterium longum		26	22
No Yes	Bifidobacterium animalis ssp. lactis Bl-04		26	22
No Yes	Bifidobacterium animalis ssp. lactis DSM 10140		26	22
No Yes	Frankia sp. EAN1pec		33	29
No Yes	Propionibacterium acnes SK137		25	21
No Yes	Mycobacterium sp. KMS		33	29
No Yes	Mycobacterium sp. JLS		34	30
No Yes	Mycobacterium avium 104		31	27
No Yes	Mycobacterium tuberculosis KZN 1435		30	26
No Yes	Mycobacterium tuberculosis H37Ra		30	26
No Yes	Mycobacterium tuberculosis F11		30	26
No Yes	Mycobacterium tuberculosis CDC1551		30	26
No Yes	Mycobacterium bovis BCG Tokyo 172		30	26
No Yes	Mycobacterium bovis BCG Pasteur 1173P2		30	26
No Yes	Mycobacterium leprae Br4923		25	21
No Yes	Corynebacterium glutamicum R		28	24
No Yes	Corynebacterium glutamicum ATCC 13032 Bielefeld		27	23
No Yes	Tropheryma whipplei TW08/27		22	18
No Yes	Clavibacter michiganensis ssp. sepedonicus		24	20
No Yes	Dehalococcoides sp. GT		18	16
No Yes	Dehalococcoides sp. VS		18	16
No Yes	Dehalococcoides sp. BAV1		19	17
No Yes	Chlorobium phaeobacteroides BS1		28	22
No Yes	Porphyromonas gingivalis ATCC 33277		31	24
No Yes	Bacteroides fragilis YCH46		32	26
No Yes	Salinibacter ruber		33	27
No Yes	Candidatus Sulcia muelleri DMIN		11	8
No Yes	Candidiatus Sulcia muelleri SMDSEM		12	7
No Yes	Blattabacterium sp. BPLAN		23	17
No Yes	Chlamydophila pneumoniae J138		24	17
No Yes	Chlamydophila pneumoniae CWL029		24	17
No Yes	Chlamydophila pneumoniae AR39		24	17
No Yes	Chlamydia trachomatis B/TZ1A828/OT		24	17
No Yes	Chlamydia trachomatis B/Jali20/OT		24	17
No Yes	Chlamydia trachomatis L2b/UCH-1/proctitis		24	17
No Yes	Chlamydia trachomatis 434/Bu		24	17
No Yes	Chlamydia trachomatis A/HAR-13		24	17
No Yes	Thermus thermophilus HB8		31	26
No Yes	Desulfitobacterium hafniense DCB-2		31	27
No Yes	Clostridium kluyveri NBRC 12016		42	36
No Yes	Clostridium perfringens SM101		34	29
No Yes	Clostridium perfringens ATCC 13124		37	32
No Yes	Clostridium difficile R20291		36	32
No Yes	Clostridium difficile CD196		34	30
No Yes	Clostridium botulinum F Langeland		43	36
No Yes	Clostridium botulinum E3 Alaska E43		36	29
No Yes	Clostridium botulinum B1 Okra		42	35
No Yes	Clostridium botulinum Ba4 657		42	35
No Yes	Clostridium botulinum B Eklund 17B		41	34
No Yes	Clostridium botulinum A2 Kyoto		42	35
No Yes	Clostridium botulinum A3 Loch Maree		43	36
No Yes	Clostridium botulinum A Hall		42	35
No Yes	Clostridium botulinum A ATCC 19397		41	34
No Yes	Lactobacillus casei BL23		37	32
No Yes	Lactobacillus rhamnosus Lc 705		37	32
No Yes	Lactobacillus johnsonii FI9785		31	26
No Yes	Lactobacillus reuteri JCM 1112		31	27
No Yes	Lactobacillus plantarum JDM1		36	32
No Yes	Lactobacillus delbrueckii ssp. bulgaricus ATCC BAA-365		32	27
No Yes	Lactococcus lactis ssp. lactis KF147		39	35
No Yes	Lactococcus lactis ssp. cremoris MG1363		40	36
No Yes	Lactococcus lactis ssp. cremoris SK11		37	33
No Yes	Streptococcus equi ssp. equi 4047		38	34
No Yes	Streptococcus equi ssp. zooepidemicus		36	32
No Yes	Streptococcus pyogenes MGAS10750		32	28
No Yes	Streptococcus pyogenes MGAS10270		34	30
No Yes	Streptococcus pyogenes MGAS2096		34	30
No Yes	Streptococcus pyogenes MGAS9429		34	30
No Yes	Streptococcus pyogenes MGAS6180		34	30
No Yes	Streptococcus pyogenes NZ131		35	31
No Yes	Streptococcus pyogenes MGAS8232		34	30
No Yes	Streptococcus pyogenes MGAS10394		35	31
No Yes	Streptococcus pyogenes Manfredo		34	30
No Yes	Streptococcus pyogenes MGAS315		35	31
No Yes	Streptococcus pyogenes SSI-1		35	31
No Yes	Streptococcus pyogenes MGAS5005		35	31
No Yes	Streptococcus pneumoniae ATCC 700669		32	28
No Yes	Streptococcus pneumoniae CGSP14		31	27
No Yes	Streptococcus pneumoniae G54		31	27
No Yes	Streptococcus pneumoniae P1031		30	26
No Yes	Streptococcus pneumoniae JJA		32	28
No Yes	Streptococcus pneumoniae 70585		31	27
No Yes	Streptococcus pneumoniae Hungary19A-6		31	27
No Yes	Streptococcus pneumoniae Taiwan19F-14		31	27
No Yes	Streptococcus pneumoniae D39		31	27
No Yes	Streptococcus pneumoniae R6 (Non-virulent)		31	27
No Yes	Streptococcus agalactiae A909		34	30
No Yes	Streptococcus agalactiae 2603V/R		35	31
No Yes	Streptococcus mutans NN2025		32	28
No Yes	Streptococcus thermophilus LMD-9		33	29
No Yes	Streptococcus thermophilus CNRZ1066 (Younger strain)		33	29
No Yes	Streptococcus suis BM407		32	28
No Yes	Streptococcus suis SC84		32	28
No Yes	Streptococcus suis 98HAH33		33	29
No Yes	Streptococcus suis P1/7		32	28
No Yes	Listeria monocytogenes 08-5578		38	34
No Yes	Listeria monocytogenes 08-5923		37	33
No Yes	Listeria monocytogenes Clip80459		37	33
No Yes	Listeria monocytogenes HCC23		39	35
No Yes	Listeria monocytogenes 4b F2365		37	33
No Yes	Geobacillus sp. Y412MC61		35	30
No Yes	Geobacillus sp. Y412MC10		37	33
No Yes	Bacillus licheniformis ATCC 14580		38	34
No Yes	Bacillus cytotoxicus NVH 391-98		40	36
No Yes	Bacillus thuringiensis Al Hakam		42	38
No Yes	Bacillus cereus 03BB102		43	39
No Yes	Bacillus cereus AH820		43	39
No Yes	Bacillus cereus AH187		43	39
No Yes	Bacillus cereus B4264		44	40
No Yes	Bacillus cereus G9842		44	40
No Yes	Bacillus cereus Q1		43	39
No Yes	Bacillus cereus E33L		43	39
No Yes	Bacillus cereus ATCC 10987		43	39
No Yes	Bacillus anthracis A0248		43	39
No Yes	Bacillus anthracis CDC 684		43	39
No Yes	Bacillus anthracis Sterne		43	39
No Yes	Bacillus anthracis Ames		43	39
No Yes	Bacillus megaterium DSM319		49	45
No Yes	Staphylococcus epidermidis ATCC 12228		33	29
No Yes	Staphylococcus aureus RF122		36	31
No Yes	Staphylococcus aureus ssp. aureus ED98		36	31
No Yes	Staphylococcus aureus ssp. aureus Newman		36	31
No Yes	Staphylococcus aureus ssp. aureus Mu3		36	31
No Yes	Staphylococcus aureus ssp. aureus USA300_TCH1516		32	27
No Yes	Staphylococcus aureus ssp. aureus USA300_FPR3757		37	32
No Yes	Staphylococcus aureus ssp. aureus JH1		39	34
No Yes	Staphylococcus aureus ssp. aureus JH9		39	34
No Yes	Staphylococcus aureus ssp. aureus MSSA476		37	32
No Yes	Staphylococcus aureus ssp. aureus MRSA252		37	32
No Yes	Staphylococcus aureus ssp. aureus MW2		37	32
No Yes	Staphylococcus aureus ssp. aureus N315		35	30
No Yes	Staphylococcus aureus ssp. aureus Mu50		36	31
No Yes	Staphylococcus aureus ssp. aureus COL		36	31
No Yes	Campylobacter jejuni RM1221		22	16
No Yes	Campylobacter jejuni ssp. jejuni 81116		22	16
No Yes	Campylobacter jejuni ssp. jejuni 81-176		22	16
No Yes	Campylobacter jejuni ssp. doylei 269.97		24	18
No Yes	Helicobacter pylori B38		20	15
No Yes	Helicobacter pylori P12		21	15
No Yes	Helicobacter pylori G27		21	15
No Yes	Helicobacter pylori Shi470		21	15
No Yes	Helicobacter pylori HPAG1		21	15
No Yes	Helicobacter pylori J99		21	15
No Yes	Desulfovibrio vulgaris DP4		37	27
No Yes	Desulfovibrio vulgaris Miyazaki F		35	25
No Yes	Desulfovibrio desulfuricans ssp. desulfuricans ATCC 27774		31	21
No Yes	Geobacter sp. M21		42	32
No Yes	Anaeromyxobacter sp. K		44	35
No Yes	Anaeromyxobacter dehalogenans 2CP-1		44	35
No Yes	Azoarcus sp. BH72		38	32
No Yes	Neisseria meningitidis alpha14		30	24
No Yes	Neisseria meningitidis 053442		30	24
No Yes	Neisseria meningitidis FAM18		30	24
No Yes	Neisseria meningitidis MC58		30	24
No Yes	Neisseria gonorrhoeae NCCP11945		31	25
No Yes	Ralstonia eutropha H16		42	35
No Yes	Ralstonia pickettii 12D		38	32
No Yes	Polynucleobacter necessarius ssp. necessarius STIR1		27	20
No Yes	Burkholderia sp. CCGE1002		40	34
No Yes	Burkholderia pseudomallei MSHR346		35	29
No Yes	Burkholderia pseudomallei 1106a		37	31
No Yes	Burkholderia pseudomallei 668		37	31
No Yes	Burkholderia pseudomallei 1710b		38	32
No Yes	Burkholderia mallei NCTC 10229		34	28
No Yes	Burkholderia mallei NCTC 10247		34	28
No Yes	Burkholderia mallei SAVP1		33	27
No Yes	Burkholderia ambifaria MC40-6		39	33
No Yes	Burkholderia cenocepacia MC0-3		40	34
No Yes	Burkholderia cenocepacia HI2424		40	34
No Yes	Burkholderia cenocepacia J2315		42	35
No Yes	Burkholderia multivorans ATCC 17616		37	31
No Yes	Caulobacter crescentus NA1000		31	24
No Yes	Zymomonas mobilis ssp. mobilis NCIMB 11163		28	20
No Yes	Rhodobacter sphaeroides KD131		36	28
No Yes	Rhodobacter sphaeroides ATCC 17025		29	26
No Yes	Rhodobacter sphaeroides ATCC 17029		37	29
No Yes	Gluconacetobacter diazotrophicus PAl 5		31	24
No Yes	Ehrlichia ruminantium Gardel		23	18
No Yes	Ehrlichia ruminantium Welgevonden		23	18
No Yes	Anaplasma marginale Florida		23	18
No Yes	Orientia tsutsugamushi Ikeda		22	17
No Yes	Rickettsia bellii OSU 85-389		24	18
No Yes	Rickettsia rickettsii Iowa		24	18
No Yes	Methylobacterium extorquens DM4		36	28
No Yes	Methylobacterium extorquens AM1		35	27
No Yes	Brucella suis ATCC 23445		32	25
No Yes	Brucella melitensis ATCC 23457		31	24
No Yes	Brucella abortus S19		31	24
No Yes	Brucella melitensis biov. Abortus 2308		31	24
No Yes	Rhizobium etli CIAT 652		38	31
No Yes	Rhizobium leguminosarum bv. trifolii WSM2304		37	30
No Yes	Rhizobium leguminosarum bv. trifolii WSM1325		36	29
No Yes	Rhodopseudomonas palustris TIE-1		35	28
No Yes	Rhodopseudomonas palustris HaA2		33	26
No Yes	Rhodopseudomonas palustris BisB5		34	27
No Yes	Rhodopseudomonas palustris BisB18		33	26
No Yes	Rhodopseudomonas palustris BisA53		35	28
No Yes	Bradyrhizobium sp. BTAi1		38	31
No Yes	Acidithiobacillus ferrooxidans ATCC 53993		31	24
No Yes	Haemophilus somnus 2336		35	29
No Yes	Haemophilus influenzae PittGG		33	27
No Yes	Haemophilus influenzae PittEE		26	25
No Yes	Haemophilus influenzae 86-028NP		35	29
No Yes	Actinobacillus pleuropneumoniae ser. 3 JL03		32	26
No Yes	Actinobacillus pleuropneumoniae ser. 7 AP76		33	27
No Yes	Vibrio fischeri MJ11		40	33
No Yes	Vibrio vulnificus CMCP6 (Poor annotation)		42	35
No Yes	Vibrio cholerae M66-2		39	32
No Yes	Vibrio cholerae O395		38	31
No Yes	Vibrio cholerae MJ-1236		40	33
No Yes	Shewanella sp. W3-18-1		35	29
No Yes	Shewanella sp. ANA-3		35	29
No Yes	Shewanella baltica OS223		36	30
No Yes	Shewanella baltica OS185		36	30
No Yes	Shewanella baltica OS195		40	34
No Yes	Shewanella sp. MR-4		36	30
No Yes	Stenotrophomonas maltophilia K279a		38	30
No Yes	Xylella fastidiosa M23		41	33
No Yes	Xylella fastidiosa M12		37	30
No Yes	Xylella fastidiosa Temecula1		40	32
No Yes	Xanthomonas campestris pv. vesicatoria 85-10 (Completed 2005)		41	33
No Yes	Xanthomonas oryzae pv. oryzae PXO99A		40	32
No Yes	Xanthomonas oryzae pv. oryzae MAFF 311018		39	31
No Yes	Xanthomonas campestris pv. campestris B100		40	32
No Yes	Xanthomonas campestris pv. campestris 8004 (Completed 2005)		42	34
No Yes	Thioalkalivibrio sp. K90mix		29	22
No Yes	Coxiella burnetii CbuK_Q154		28	21
No Yes	Coxiella burnetii CbuG_Q212		28	21
No Yes	Coxiella burnetii Dugway 5J108-111		27	20
No Yes	Coxiella burnetii RSA 331		28	21
No Yes	Legionella pneumophila Corby		37	31
No Yes	Legionella pneumophila Paris		38	32
No Yes	Legionella pneumophila Lens		38	32
No Yes	Dickeya dadantii Ech586		38	31
No Yes	Candidatus Blochmannia pennsylvanicus BPEN		23	17
No Yes	Buchnera aphidicola Cc		21	15
No Yes	Buchnera aphidicola Bp		23	17
No Yes	Buchnera aphidicola Tuc7		25	19
No Yes	Buchnera aphidicola 5A		25	19
No Yes	Buchnera aphidicola Sg		23	17
No Yes	Yersinia pseudotuberculosis PB1/+		43	36
No Yes	Yersinia pseudotuberculosis YPIII		44	37
No Yes	Yersinia pseudotuberculosis IP 31758		41	34
No Yes	Yersinia pestis Z176003		31	24
No Yes	Yersinia pestis Pestoides F		41	34
No Yes	Yersinia pestis Nepal516		41	34
No Yes	Yersinia pestis Antiqua		42	35
No Yes	Yersinia pestis Angola		36	30
No Yes	Yersinia pestis biov. Microtus 91001		42	35
No Yes	Yersinia pestis KIM		39	32
No Yes	Shigella flexneri 5 8401		39	32
No Yes	Shigella flexneri 2a 301		39	32
No Yes	Shigella boydii CDC 3083-94		40	33
No Yes	Salmonella enterica ssp. arizonae ser. 62:z4,z23:--		38	31
No Yes	Salmonella enterica ssp. enterica ser. Schwarzengrund CVM19633		39	32
No Yes	Salmonella enterica ssp. enterica ser. Enteritidis P125109		40	33
No Yes	Salmonella enterica ssp. enterica ser. Choleraesuis str. SC-B67		41	34
No Yes	Salmonella enterica ssp. enterica ser. Newport SL254		37	30
No Yes	Salmonella enterica ssp. enterica ser. Dublin CT_02021853		38	31
No Yes	Salmonella enterica ssp. enterica ser. Typhi CT18		38	32
No Yes	Salmonella enterica ssp. enterica ser. Typhi Ty2		40	33
No Yes	Salmonella enterica ssp. enterica ser. Agona SL483		35	29
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi C RKS4594		42	35
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi B SPB7		40	33
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi A AKU_12601		40	33
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi A ATCC 9150		40	33
No Yes	Salmonella enterica ssp. enterica ser. Heidelberg SL476		37	30
No Yes	Salmonella enterica ssp. enterica ser. Gallinarum 287/91		39	32
No Yes	Klebsiella pneumoniae 342		39	32
No Yes	Klebsiella pneumoniae NTUH-K2044		40	33
No Yes	Escherichia coli ED1a		47	40
No Yes	Escherichia coli IAI39		46	39
No Yes	Escherichia coli UMN026		45	38
No Yes	Escherichia coli 55989		42	35
No Yes	Escherichia coli S88		45	38
No Yes	Escherichia coli IAI1		46	39
No Yes	Escherichia coli BL21		42	35
No Yes	Escherichia coli ATCC 8739		44	37
No Yes	Escherichia coli BL21(DE3)		43	36
No Yes	Escherichia coli SMS-3-5		42	35
No Yes	Escherichia coli SE11		42	35
No Yes	Escherichia coli APEC O1		34	27
No Yes	Escherichia coli O103:H2 12009		44	37
No Yes	Escherichia coli UTI89		42	35
No Yes	Escherichia coli 536		43	36
No Yes	Escherichia coli HS		43	36
No Yes	Escherichia coli E24377A		43	36
No Yes	Escherichia coli O55:H7 CB9615		47	40
No Yes	Escherichia coli O26:H11 11368		47	40
No Yes	Escherichia coli CFT073		44	37
No Yes	Escherichia coli O111:H- 11128		40	33
No Yes	Escherichia coli O127:H6 E2348/69		45	38
No Yes	Escherichia coli O157:H7 EDL933		43	36
No Yes	Escherichia coli O157:H7 TW14359		43	36
No Yes	Escherichia coli O157:H7 EC4115		42	35
No Yes	Escherichia coli O157:H7 Sakai		43	36
No Yes	Escherichia coli BW2952		43	37
No Yes	Escherichia coli K-12 subW3110		45	38
No Yes	Escherichia coli K-12 subDH10B		44	37
No Yes	Escherichia coli B REL606		44	37
No Yes	Erwinia amylovora CFBP1430		39	32
No Yes	Pseudomonas syringae pv. phaseolicola 1448A		38	32
No Yes	Pseudomonas syringae pv. syringae B728a		39	33
No Yes	Pseudomonas putida W619		41	34
No Yes	Pseudomonas putida F1		40	34
No Yes	Pseudomonas putida GB-1		39	32
No Yes	Pseudomonas fluorescens SBW25		40	34
No Yes	Pseudomonas fluorescens Pf0-1		39	33
No Yes	Pseudomonas aeruginosa LESB58		40	33
No Yes	Pseudomonas aeruginosa PA7		40	33
No Yes	Pseudomonas aeruginosa UCBPP-PA14		39	32
No Yes	Acinetobacter baumannii AB307-0294		36	30
No Yes	Acinetobacter baumannii AYE		37	31
No Yes	Acinetobacter baumannii SDF		32	26
No Yes	Acinetobacter baumannii AB0057		36	30
No Yes	Acinetobacter baumannii ACICU		33	28
No Yes	Francisella novicida U112		30	24
No Yes	Francisella tularensis ssp. mediasiatica FSC147		29	23
No Yes	Francisella tularensis ssp. holarctica FTNF002-00		31	25
No Yes	Francisella tularensis ssp. holarctica OSU18		30	24
No Yes	Francisella tularensis ssp. holarctica		31	25
No Yes	Francisella tularensis ssp. tularensis WY96-3418		31	25
No Yes	Francisella tularensis ssp. tularensis FSC198		31	25
No Yes	Prochlorococcus marinus NATL1A		26	21
No Yes	Prochlorococcus marinus MIT 9301		27	22
No Yes	Prochlorococcus marinus MIT 9515		27	22
No Yes	Prochlorococcus marinus AS9601		26	21
No Yes	Prochlorococcus marinus ssp. marinus CCMP1375		26	21
No Yes	Prochlorococcus marinus ssp. pastoris CCMP1986		27	22
No Yes	Prochlorococcus marinus MIT 9215		26	21
No Yes	Prochlorococcus marinus MIT 9211		25	20
No Yes	Prochlorococcus marinus MIT 9312		27	22
No Yes	Prochlorococcus marinus MIT 9303		27	22
No Yes	Prochlorococcus marinus NATL2A		26	21
No Yes	Cyanothece sp. PCC 8802		31	26
No Yes	Cyanothece sp. PCC 7425		30	25
No Yes	Cyanothece sp. PCC 7424		29	24
No Yes	Cyanothece sp. PCC 8801		31	26
No Yes	Synechococcus sp. JA-2-3Ba(2-13) (Poor annotation)		27	22
No Yes	Synechococcus sp. JA-3-3Ab (Poor annotation)		27	22
No Yes	Synechococcus sp. CC9902 (Poor annotation)		27	22
No Yes	Synechococcus sp. RCC307		27	22
No Yes	Synechococcus sp. CC9605 (Poor annotation)		28	23
No Yes	Synechococcus sp. WH 8102 (Good annotation)		28	23
No Yes	Synechococcus sp. CC9311		27	22
No Yes	Synechococcus sp. WH 7803		28	23
No Yes	Synechococcus sp. PCC 7002		28	23
No Yes	Synechococcus elongatus PCC 7942		29	24
No Yes	Methanococcus maripaludis C6		31	25
No Yes	Methanococcus maripaludis C7		27	21
No Yes	Methanococcus maripaludis C5		27	21
No Yes	Sulfolobus islandicus Y.G.57.14		16	16
No Yes	Sulfolobus islandicus L.S.2.15		16	16
No Yes	Sulfolobus islandicus M.16.27		16	16
No Yes	Sulfolobus islandicus M.14.25		16	16
No Yes	Sulfolobus islandicus M.16.4		16	16
No Yes	Sulfolobus islandicus L.D.8.5		16	16
No Yes	Ailuropoda melanoleuca (Draft)	Giant panda	86	68
No Yes	Moniliophthora perniciosa FA553 (Genome survey)		27	26
No Yes	Lotus japonicus (Early assembly)		96	62
No Yes	Prunus persica (Early draft)	Peach	137	105
No Yes	Manihot esculenta (Early draft)	Cassava	158	134
No Yes	Ricinus communis (Early assembly)	Castor bean	133	105
No Yes	Mimulus guttatus (Early draft)	Spotted monkey flower	159	125
No Yes	Phoenix dactylifera (Early draft)	Date palm	85	65
No Yes	Trypanosoma vivax (Parial)		50	47
No Yes	Trypanosoma congolense (Partial)		44	42
No Yes	Toxoplasma gondii GT1 (Early assembly)		59	49
No Yes	Toxoplasma gondii VEG (Early assembly)		56	46
No Yes	Toxoplasma gondii RH (Archived)		57	49
No Yes	Homo sapiens 49_36k (longest transcript per gene)	Human	87	67
No Yes	Pan troglodytes 49_21h (longest transcript per gene)	Chimpanzee	79	64
No Yes	Gorilla gorilla 52_1 (longest transcript per gene)	Western Gorilla	58	46
No Yes	Pongo pygmaeus 49_1 (longest transcript per gene)	Bornean orangutan	82	63
No Yes	Macaca mulatta 49_10h (longest transcript per gene)	Rhesus monkey	88	70
No Yes	Callithrix jacchus 56_3 (longest transcript per gene)	White-tufted-ear marmoset	112	90
No Yes	Otolemur garnettii 49_1c (longest transcript per gene)	Small-eared galago	56	49
No Yes	Microcebus murinus 49_1 (longest transcript per gene)	Gray mouse lemur	70	57
No Yes	Tarsius syrichta 51_1 (longest transcript per gene)	Philippine tarsier	58	48
No Yes	Rattus norvegicus 49_34s (longest transcript per gene)	Norway rat	114	94
No Yes	Mus musculus 49_37b (longest transcript per gene)	House mouse	99	80
No Yes	Spermophilus tridecemlineatus 49_1e (longest transcript per gene)	Thirteen-lined ground squirrel	52	44
No Yes	Dipodomys ordii 51_1 (longest transcript per gene)	Ord's kangaroo rat	67	53
No Yes	Cavia porcellus 51_3 (longest transcript per gene)	Domestic guinea pig	83	67
No Yes	Oryctolagus cuniculus 49_1f (longest transcript per gene)	Rabbit	73	55
No Yes	Ochotona princeps 49_1 (longest transcript per gene)	American pika	70	53
No Yes	Tupaia belangeri 49_1d (longest transcript per gene)	Northern tree shrew	67	54
No Yes	Sus scrofa 56_9 (longest transcript per gene)	Pig	77	59
No Yes	Bos taurus 49_3f (longest transcript per gene)	Cattle	99	75
No Yes	Vicugna pacos 51_1 (longest transcript per gene)	Alpaca	59	44
No Yes	Tursiops truncatus 51_1 (longest transcript per gene)	Bottlenosed dolphin	78	61
No Yes	Canis familiaris 49_2g (longest transcript per gene)	Dog	87	69
No Yes	Felis catus 49_1c (longest transcript per gene)	Domestic cat	57	46
No Yes	Equus caballus 49_2 (longest transcript per gene)	Horse	82	64
No Yes	Myotis lucifugus 49_1e (longest transcript per gene)	Little brown bat	71	56
No Yes	Pteropus vampyrus 51_1 (longest transcript per gene)	Large flying fox	79	60
No Yes	Sorex araneus 49_1c (longest transcript per gene)	European shrew	59	44
No Yes	Erinaceus europaeus 49_1c (longest transcript per gene)	Western European hedgehog	65	51
No Yes	Procavia capensis 51_1 (longest transcript per gene)	Cape rock hyrax	63	54
No Yes	Loxodonta africana 49_1d (longest transcript per gene)	African savanna elephant	57	44
No Yes	Echinops telfairi 49_1e (longest transcript per gene)	Small Madagascar hedgehog	83	63
No Yes	Dasypus novemcinctus 49_1f (longest transcript per gene)	Nine-banded armadillo	63	49
No Yes	Macropus eugenii 55_1 (longest transcript per gene)	Tammar wallaby	63	50
No Yes	Monodelphis domestica 49_5d (longest transcript per gene)	Gray short-tailed opossum	85	67
No Yes	Ornithorhynchus anatinus 49_1f (longest transcript per gene)	Platypus	68	48
No Yes	Anolis carolinensis 55_1a (longest transcript per gene)	Green anole	69	52
No Yes	Taeniopygia guttata 57_1c (longest transcript per gene)	Zebra finch	75	64
No Yes	Meleagris gallopavo 57_2 (longest transcript per gene)	Turkey	64	50
No Yes	Gallus gallus 49_2g (longest transcript per gene)	Chicken	73	55
No Yes	Xenopus tropicalis 49_41i (longest transcript per gene)	Western clawed frog	75	58
No Yes	Danio rerio 49_7c (longest transcript per gene)	Zebrafish	73	59
No Yes	Gasterosteus aculeatus 49_1f (longest transcript per gene)	Three-spined stickleback	85	64
No Yes	Oryzias latipes 49_1e (longest transcript per gene)	Japanese medaka	80	65
No Yes	Tetraodon nigroviridis 49_1k (longest transcript per gene)	Spotted green pufferfish	85	63
No Yes	Takifugu rubripes 49_4i (longest transcript per gene)	Torafugu	85	64
No Yes	Ciona savignyi 49_2f (longest transcript per gene)		39	34
No Yes	Ciona intestinalis 49_2i (longest transcript per gene)		50	44
No Yes	Apis mellifera 37.2d (longest transcript per gene) (Not maintained)	Honey bee	43	37
No Yes	Drosophila melanogaster FlyBase 5.12 (longest transcript per gene) (FlyBase)	Fruit fly	77	62
No Yes	Drosophila melanogaster Ensembl 49_54 (longest transcript per gene)	Fruit fly	61	50
No Yes	Aedes aegypti 49_1b (longest transcript per gene)	Yellow fever mosquito	63	51
No Yes	Anopheles gambiae 49_3j (longest transcript per gene)	African malaria mosquito	56	47
No Yes	Caenorhabditis elegans WormBase WS194 (longest transcript per gene) (WormBase)	Nematode	60	53
No Yes	Caenorhabditis elegans Ensembl 49_180a (longest transcript per gene)	Nematode	60	53
No Yes	Arabidopsis thaliana 9 (longest transcript per gene)	Thale cress	163	120
No Yes	Oryza sativa ssp. japonica 5.0 (Not transposons)	Japanese rice	229	168
No Yes	NCBI viral sequences (Viral)		270	270
No Yes	PDB chains (SCOP 1.73) (PDB)		193	174
No Yes	TargetDB (Targets)		2214	1614
No Yes	UniProt 15.0 (UniProt)		52530	43679
No Yes	UniProt 15.0 viral sequences (Viral)		386	386