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Avidin/streptavidin superfamily domain assignments

Network of domain occurrence in all genomes



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Select to display   Genome       Domains   Proteins
No Yes ALL   6967 6967
No Yes Saccoglossus kowalevskii v3.0   3 1
No Yes Meleagris gallopavo 76_2 Turkey 3 3
No Yes Gallus gallus 76_4 Chicken 6 6
No Yes Anas platyrhynchos 76_1.0 Mallard 4 4
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 2 2
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 5 5
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 5 5
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 1 1
No Yes Latimeria chalumnae 76_1 Coelacanth 1 1
No Yes Lepisosteus oculatus 76 Spotted gar 5 5
No Yes Danio rerio 76_9 Zebrafish 1 1
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 17 17
No Yes Octopus bimaculoides 280   6 4
No Yes Capitella sp. I   3 3
No Yes Strigamia maritima 22   1 1
No Yes Acropora digitifera v1.0   1 1
No Yes Nematostella vectensis 1.0 Starlet sea anemone 4 4
No Yes Amphimedon queenslandica   4 3
No Yes Trichoplax adhaerens   1 1
No Yes Galerina marginata v1.0   6 6
No Yes Catenulispora acidiphila DSM 44928   1 1
No Yes Ralstonia eutropha JMP134   1 1
No Yes Burkholderia thailandensis E264   2 2
No Yes Burkholderia pseudomallei 1106a   2 2
No Yes Burkholderia mallei SAVP1   1 1
No Yes Burkholderia glumae BGR1   1 1
No Yes Methylobacterium chloromethanicum CM4   1 1
No Yes Methylobacterium radiotolerans JCM 2831   1 1
No Yes Rhizobium etli CIAT 652   1 1
No Yes Mesorhizobium opportunistum WSM2075   1 1
No Yes Bradyrhizobium japonicum USDA 110   2 2
No Yes Shewanella denitrificans OS217   1 1
No Yes Marinomonas posidonica IVIA-Po-181   1 1
No Yes Marinomonas sp. MWYL1   1 1
No Yes Marinomonas mediterranea MMB-1   1 1
No Yes Xanthomonas albilineans GPE PC73   1 1
No Yes Xanthomonas oryzae pv. oryzae PXO99A   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 7 7
No Yes Ascaris suum Victoria/Ghent Pig roundworm 1 1
No Yes Burkholderia pseudomallei MSHR305   2 2
No Yes Burkholderia pseudomallei NCTC 13179   2 2
No Yes Burkholderia pseudomallei BPC006   2 2
No Yes Burkholderia pseudomallei 1026b   2 2
No Yes Burkholderia pseudomallei MSHR346   2 2
No Yes Burkholderia pseudomallei 668   2 2
No Yes Burkholderia pseudomallei 1710b   2 2
No Yes Burkholderia pseudomallei K96243   2 2
No Yes Burkholderia mallei NCTC 10229   1 1
No Yes Burkholderia mallei NCTC 10247   1 1
No Yes Burkholderia mallei ATCC 23344   1 1
No Yes Burkholderia cenocepacia J2315   1 1
No Yes Variovorax paradoxus B4   1 1
No Yes Rhizobium etli CFN 42   1 1
No Yes Mesorhizobium australicum WSM2073   1 1
No Yes Rhodopseudomonas palustris BisB18   1 1
No Yes Bradyrhizobium japonicum USDA 6   1 1
No Yes Xanthomonas oryzae pv. oryzicola BLS256   1 1
No Yes Xanthomonas oryzae pv. oryzae MAFF 311018   1 1
No Yes Xanthomonas campestris pv. campestris str. 8004   1 1
No Yes Legionella pneumophila str. Paris   1 1
No Yes Legionella pneumophila str. Lens   1 1
No Yes Legionella pneumophila subsp. pneumophila LPE509   1 1
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   1 1
No Yes Meleagris gallopavo 69_2 Turkey 3 3
No Yes Gallus gallus 69_2 Chicken 6 6
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 2 2
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 5 5
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 1 1
No Yes Latimeria chalumnae 69_1 Coelacanth 1 1
No Yes Danio rerio 69_9 Zebrafish 1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   3428 3409
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   73 73
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   737 725
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes NCBI plasmid sequences (Plasmids)   7 7
No Yes PDB chains (SCOP 1.75) (PDB)   40 40
No Yes Protein Data Bank (all PDB sequenc)   691 685
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1727 1727

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