Nucleotidylyl transferase superfamily domain assignments

Select to display	Genome		Domains	Proteins
No Yes	ALL		50292	50292
No Yes	Homo sapiens 49_36k (all transcripts)	Human	64	63
No Yes	Pan troglodytes 49_21h (all transcripts)	Chimpanzee	42	41
No Yes	Gorilla gorilla 52_1 (all transcripts)	Western lowland gorilla	28	27
No Yes	Pongo pygmaeus 49_1 (all transcripts)	Bornean orangutan	37	35
No Yes	Macaca mulatta 49_10h (all transcripts)	Rhesus monkey	51	50
No Yes	Callithrix jacchus 56_3 (all transcripts)	White-tufted-ear marmoset	60	59
No Yes	Otolemur garnettii 49_1c (all transcripts)	Small-eared galago	25	25
No Yes	Microcebus murinus 49_1 (all transcripts)	Gray mouse lemur	29	28
No Yes	Tarsius syrichta 51_1 (all transcripts)	Philippine tarsier	23	23
No Yes	Rattus norvegicus 49_34s (all transcripts)	Norway rat	44	43
No Yes	Mus musculus 49_37b (all transcripts)	House mouse	52	50
No Yes	Spermophilus tridecemlineatus 49_1e (all transcripts)	Thirteen-lined ground squirrel	26	26
No Yes	Dipodomys ordii 51_1 (all transcripts)	Ord's kangaroo rat	28	27
No Yes	Cavia porcellus 51_3 (all transcripts)	Domestic guinea pig	33	32
No Yes	Oryctolagus cuniculus 49_1f (all transcripts)	Rabbit	23	23
No Yes	Ochotona princeps 49_1 (all transcripts)	American pika	26	26
No Yes	Tupaia belangeri 49_1d (all transcripts)	Northern tree shrew	26	25
No Yes	Sus scrofa 56_9 (all transcripts)	Pig	28	28
No Yes	Bos taurus 49_3f (all transcripts)	Cattle	39	38
No Yes	Vicugna pacos 51_1 (all transcripts)	Alpaca	23	23
No Yes	Tursiops truncatus 51_1 (all transcripts)	Bottlenosed dolphin	30	29
No Yes	Canis familiaris 49_2g (all transcripts)	Dog	44	42
No Yes	Felis catus 49_1c (all transcripts)	Domestic cat	23	23
No Yes	Equus caballus 49_2 (all transcripts)	Horse	34	33
No Yes	Myotis lucifugus 49_1e (all transcripts)	Little brown bat	25	25
No Yes	Pteropus vampyrus 51_1 (all transcripts)	Large flying fox	30	29
No Yes	Sorex araneus 49_1c (all transcripts)	European shrew	20	19
No Yes	Erinaceus europaeus 49_1c (all transcripts)	Western European hedgehog	26	25
No Yes	Procavia capensis 51_1 (all transcripts)	Cape rock hyrax	28	27
No Yes	Loxodonta africana 49_1d (all transcripts)	African savanna elephant	26	26
No Yes	Echinops telfairi 49_1e (all transcripts)	Small Madagascar hedgehog	28	28
No Yes	Dasypus novemcinctus 49_1f (all transcripts)	Nine-banded armadillo	23	23
No Yes	Macropus eugenii 55_1 (all transcripts)	Tammar wallaby	28	27
No Yes	Monodelphis domestica 49_5d (all transcripts)	Gray short-tailed opossum	53	51
No Yes	Ornithorhynchus anatinus 49_1f (all transcripts)	Platypus	45	44
No Yes	Anolis carolinensis 55_1a (all transcripts)	Green anole	30	29
No Yes	Gallus gallus 49_2g (all transcripts)	Chicken	28	27
No Yes	Xenopus laevis	African clawed frog	55	53
No Yes	Xenopus tropicalis 49_41i (all transcripts)	Western clawed frog	53	52
No Yes	Danio rerio 49_7c (all transcripts)	Zebrafish	42	41
No Yes	Gasterosteus aculeatus 49_1f (all transcripts)	Three-spined stickleback	55	50
No Yes	Oryzias latipes 49_1e (all transcripts)	Japanese medaka	42	38
No Yes	Tetraodon nigroviridis 49_1k (all transcripts)	Spotted green pufferfish	36	34
No Yes	Takifugu rubripes 49_4i (all transcripts)		63	60
No Yes	Branchiostoma floridae 1.0	Florida lancelet	68	62
No Yes	Ciona savignyi 49_2f (all transcripts)		83	79
No Yes	Ciona intestinalis 49_2i (all transcripts)		57	54
No Yes	Strongylocentrotus purpuratus	Purple sea urchin	82	81
No Yes	Helobdella robusta		26	25
No Yes	Capitella sp. I		32	32
No Yes	Bombyx mori	Domestic silkworm	22	21
No Yes	Nasonia vitripennis	Jewel wasp	24	23
No Yes	Apis mellifera 37.2d (all transcripts) (Not maintained)	Honey bee	74	74
No Yes	Drosophila grimshawi 1.3		25	24
No Yes	Drosophila willistoni 1.3		25	24
No Yes	Drosophila pseudoobscura 2.3		27	26
No Yes	Drosophila persimilis 1.3		27	26
No Yes	Drosophila yakuba 1.3		30	29
No Yes	Drosophila simulans 1.3		25	24
No Yes	Drosophila sechellia 1.3		28	27
No Yes	Drosophila melanogaster Ensembl 49_54 (all transcripts)	Fruit fly	44	41
No Yes	Drosophila erecta 1.3		26	25
No Yes	Drosophila ananassae 1.3		26	25
No Yes	Drosophila virilis 1.2		29	27
No Yes	Drosophila mojavensis 1.3		26	25
No Yes	Aedes aegypti 49_1b (all transcripts)	Yellow fever mosquito	29	28
No Yes	Culex pipiens quinquefasciatus	Southern house mosquito	31	30
No Yes	Anopheles gambiae 49_3j (all transcripts)		24	23
No Yes	Tribolium castaneum 3.0	Red flour beetle	30	28
No Yes	Acyrthosiphon pisum	Pea aphid	26	25
No Yes	Daphnia pulex	Common water flea	34	33
No Yes	Lottia gigantea		27	26
No Yes	Pristionchus pacificus		40	37
No Yes	Meloidogyne hapla		28	26
No Yes	Brugia malayi	Agent of lymphatic filariasis	16	15
No Yes	Caenorhabditis japonica		30	27
No Yes	Caenorhabditis brenneri		28	25
No Yes	Caenorhabditis remanei		43	40
No Yes	Caenorhabditis elegans Ensembl 49_180a (all transcripts)	Nematode	47	44
No Yes	Caenorhabditis briggsae 2		30	28
No Yes	Schistosoma mansoni		30	28
No Yes	Nematostella vectensis 1.0	Starlet sea anemone	30	29
No Yes	Hydra magnipapillata		30	29
No Yes	Trichoplax adhaerens		30	30
No Yes	Proterospongia sp. ATCC 50818		25	24
No Yes	Monosiga brevicollis		27	26
No Yes	Capsaspora owczarzaki ATCC 30864		25	24
No Yes	Malassezia globosa CBS 7966		21	21
No Yes	Ustilago maydis		21	21
No Yes	Puccinia graminis f. sp. tritici CRL 75-36-700-3		26	25
No Yes	Melampsora laricis-populina		22	22
No Yes	Sporobolomyces roseus IAM 13481		19	19
No Yes	Serpula lacrymans var. lacrymans S7.9		20	20
No Yes	Coprinopsis cinerea okayama7 130		23	23
No Yes	Pleurotus ostreatus	Oyster mushroom	22	22
No Yes	Laccaria bicolor S238N-H82		24	24
No Yes	Schizophyllum commune		22	22
No Yes	Heterobasidion annosum		18	18
No Yes	Phanerochaete chrysosporium RP-78 2.1		22	22
No Yes	Postia placenta		36	36
No Yes	Tremella mesenterica		21	21
No Yes	Cryptococcus neoformans JEC21		20	20
No Yes	Schizosaccharomyces octosporus yFS286		25	24
No Yes	Schizosaccharomyces japonicus yFS275		24	23
No Yes	Schizosaccharomyces pombe	Fission yeast	24	24
No Yes	Magnaporthe grisea 70-15		26	25
No Yes	Podospora anserina		27	26
No Yes	Sporotrichum thermophile ATCC 42464		24	23
No Yes	Thielavia terrestris NRRL 8126		30	29
No Yes	Chaetomium globosum CBS 148.51		28	27
No Yes	Neurospora tetrasperma		25	24
No Yes	Neurospora discreta FGSC 8579		24	23
No Yes	Neurospora crassa OR74A		23	22
No Yes	Cryphonectria parasitica	Chestnut blight fungus	25	24
No Yes	Fusarium oxysporum f. sp. lycopersici 4286		27	26
No Yes	Nectria haematococca mpVI		28	28
No Yes	Fusarium verticillioides 7600		28	27
No Yes	Fusarium graminearum		26	26
No Yes	Trichoderma atroviride		27	26
No Yes	Trichoderma reesei 1.2		25	24
No Yes	Trichoderma virens Gv29-8		27	26
No Yes	Verticillium dahliae VdLs.17		25	24
No Yes	Verticillium albo-atrum VaMs.102		24	24
No Yes	Botrytis cinerea B05.10		27	27
No Yes	Sclerotinia sclerotiorum		27	26
No Yes	Ajellomyces dermatitidis SLH14081		28	27
No Yes	Histoplasma capsulatum class NAmI strain WU24		27	26
No Yes	Microsporum gypseum		28	28
No Yes	Microsporum canis CBS 113480		27	26
No Yes	Trichophyton equinum CBS 127.97		26	25
No Yes	Trichophyton tonsurans CBS 112818		27	27
No Yes	Trichophyton rubrum CBS 118892		27	27
No Yes	Paracoccidioides brasiliensis Pb18		25	24
No Yes	Coccidioides posadasii RMSCC 3488		24	23
No Yes	Coccidioides immitis RS		24	23
No Yes	Uncinocarpus reesii 1704		24	23
No Yes	Neosartorya fischeri NRRL 181		25	24
No Yes	Penicillium chrysogenum Wisconsin 54-1255		23	22
No Yes	Penicillium marneffei ATCC 18224		28	27
No Yes	Aspergillus carbonarius ITEM 5010		26	25
No Yes	Aspergillus terreus NIH2624		29	27
No Yes	Aspergillus fumigatus Af293		24	23
No Yes	Aspergillus oryzae RIB40		28	27
No Yes	Aspergillus niger ATCC 1015		16	15
No Yes	Aspergillus flavus NRRL3357		28	28
No Yes	Aspergillus clavatus NRRL 1		27	26
No Yes	Aspergillus nidulans FGSC A4		24	23
No Yes	Alternaria brassicicola		25	24
No Yes	Pyrenophora tritici-repentis		28	27
No Yes	Cochliobolus heterostrophus		24	24
No Yes	Stagonospora nodorum		28	27
No Yes	Mycosphaerella fijiensis CIRAD86		19	19
No Yes	Mycosphaerella graminicola IPO323		24	23
No Yes	Candida tropicalis MYA-3404		24	23
No Yes	Candida parapsilosis		24	23
No Yes	Candida albicans SC5314		25	24
No Yes	Yarrowia lipolytica CLIB122		24	23
No Yes	Candida lusitaniae ATCC 42720		24	23
No Yes	Vanderwaltozyma polyspora DSM 70294		24	24
No Yes	Candida glabrata CBS138		25	24
No Yes	Kluyveromyces thermotolerans CBS 6340		24	23
No Yes	Lachancea kluyveri		24	23
No Yes	Kluyveromyces waltii		24	23
No Yes	Lodderomyces elongisporus NRRL YB-4239		26	25
No Yes	Ashbya gossypii ATCC 10895		24	23
No Yes	Debaromyces hansenii		24	23
No Yes	Zygosaccharomyces rouxii		24	23
No Yes	Saccharomyces mikatae MIT		29	28
No Yes	Saccharomyces paradoxus MIT		27	26
No Yes	Saccharomyces cerevisiae SGD (SGD)	Baker's yeast	26	25
No Yes	Saccharomyces bayanus MIT		28	27
No Yes	Candida guilliermondii ATCC 6260		28	27
No Yes	Pichia stipitis CBS 6054		24	23
No Yes	Pichia pastoris GS115		23	22
No Yes	Kluyveromyces lactis		22	22
No Yes	Allomyces macrogynus ATCC 38327		49	47
No Yes	Rhizopus oryzae RA 99-880		35	33
No Yes	Phycomyces blakesleeanus		31	29
No Yes	Mucor circinelloides		32	30
No Yes	Encephalitozoon cuniculi		13	12
No Yes	Spizellomyces punctatus DAOM BR117		24	23
No Yes	Batrachochytrium dendrobatidis JEL423		18	17
No Yes	Dictyostelium discoideum		27	26
No Yes	Dictyostelium purpureum		27	26
No Yes	Entamoeba histolytica 1		26	24
No Yes	Vitis vinifera	Wine grape	53	51
No Yes	Arabidopsis lyrata	Lyrate rockcress	54	53
No Yes	Arabidopsis thaliana 9 (all transcripts)	Thale cress	45	44
No Yes	Carica papaya	Papaya	32	31
No Yes	Medicago truncatula	Barrel medic	34	32
No Yes	Populus trichocarpa 1.1	Black cottonwood	69	65
No Yes	Oryza sativa ssp. japonica 5.0	Japanese rice	87	82
No Yes	Zea mays subsp. mays	Maize	81	78
No Yes	Sorghum bicolor	Sorghum	52	48
No Yes	Selaginella moellendorffii		69	67
No Yes	Physcomitrella patens subsp. patens		42	40
No Yes	Coccomyxa sp. C-169		28	27
No Yes	Chlorella sp. NC64A		23	23
No Yes	Chlorella vulgaris		27	26
No Yes	Volvox carteri f. nagariensis		28	27
No Yes	Chlamydomonas reinhardtii 4.0		26	25
No Yes	Ostreococcus sp. RCC809		28	27
No Yes	Ostreococcus lucimarinus CCE9901		28	27
No Yes	Ostreococcus tauri		28	27
No Yes	Micromonas sp. RCC299		28	27
No Yes	Micromonas pusilla CCMP1545		27	26
No Yes	Cyanidioschyzon merolae		28	27
No Yes	Giardia lamblia		14	14
No Yes	Trypanosoma cruzi strain CL Brener		35	33
No Yes	Trypanosoma brucei		17	15
No Yes	Leishmania major strain Friedlin		18	16
No Yes	Leishmania infantum JPCM5		18	16
No Yes	Leishmania braziliensis MHOM/BR/75/M2904		17	15
No Yes	Aureococcus anophagefferens		35	34
No Yes	Phytophthora ramorum 1.1	Sudden oak death agent	36	34
No Yes	Phytophthora sojae 1.1		30	28
No Yes	Phytophthora infestans T30-4		32	30
No Yes	Phytophthora capsici		41	40
No Yes	Phaeodactylum tricornutum		32	31
No Yes	Fragilariopsis cylindrus		53	50
No Yes	Thalassiosira pseudonana		31	30
No Yes	Paramecium tetraurelia		36	34
No Yes	Tetrahymena thermophila SB210 1		31	29
No Yes	Babesia bovis T2Bo		24	22
No Yes	Theileria parva		24	22
No Yes	Theileria annulata		24	22
No Yes	Plasmodium falciparum 3D7		24	22
No Yes	Plasmodium vivax SaI-1		24	22
No Yes	Plasmodium knowlesi strain H		24	22
No Yes	Plasmodium yoelii ssp. yoelii 1		27	24
No Yes	Plasmodium chabaudi		40	38
No Yes	Plasmodium berghei ANKA		37	35
No Yes	Cryptosporidium hominis		15	14
No Yes	Cryptosporidium muris		14	13
No Yes	Cryptosporidium parvum Iowa II		14	13
No Yes	Neospora caninum		25	24
No Yes	Toxoplasma gondii ME49		24	23
No Yes	Naegleria gruberi		29	28
No Yes	Trichomonas vaginalis		23	22
No Yes	Emiliania huxleyi CCMP1516		49	49
No Yes	Candidatus Phytoplasma mali		10	10
No Yes	Aster yellows witches-broom phytoplasma AYWB		10	10
No Yes	Onion yellows phytoplasma OY-M		10	10
No Yes	Acholeplasma laidlawii PG-8A		13	13
No Yes	Mesoplasma florum L1		11	11
No Yes	Ureaplasma parvum ser. 3 ATCC 700970		11	11
No Yes	Ureaplasma urealyticum ser. 10 ATCC 33699		11	11
No Yes	Mycoplasma mycoides ssp. mycoides SC PG1		12	12
No Yes	Mycoplasma capricolum ssp. capricolum ATCC 27343		12	12
No Yes	Mycoplasma conjunctivae		12	12
No Yes	Mycoplasma penetrans HF-2		12	12
No Yes	Mycoplasma mobile 163K		13	13
No Yes	Mycoplasma arthritidis 158L3-1		12	12
No Yes	Mycoplasma agalactiae PG2		13	13
No Yes	Mycoplasma synoviae 53		13	13
No Yes	Mycoplasma pulmonis UAB CTIP		13	13
No Yes	Mycoplasma pneumoniae M129		11	11
No Yes	Mycoplasma hyopneumoniae 232		12	12
No Yes	Mycoplasma genitalium G37		11	11
No Yes	Mycoplasma gallisepticum R		11	11
No Yes	Brachyspira hyodysenteriae WA1		15	15
No Yes	Leptospira borgpetersenii ser. Hardjo-bovis L550		14	14
No Yes	Leptospira interrogans ser. Lai 56601		15	15
No Yes	Leptospira biflexa ser. Patoc Patoc 1 (Paris)		15	15
No Yes	Treponema pallidum ssp. pallidum Nichols		13	13
No Yes	Treponema denticola ATCC 35405		16	16
No Yes	Borrelia garinii PBi		12	12
No Yes	Borrelia afzelii PKo		12	12
No Yes	Borrelia burgdorferi B31		12	12
No Yes	Borrelia recurrentis A1		12	12
No Yes	Borrelia duttonii Ly		12	12
No Yes	Borrelia turicatae 91E135		12	12
No Yes	Borrelia hermsii DAH		12	12
No Yes	Rhodopirellula baltica SH 1		16	16
No Yes	Bifidobacterium longum NCC2705		14	14
No Yes	Bifidobacterium animalis ssp. lactis AD011		14	14
No Yes	Bifidobacterium adolescentis ATCC 15703		12	12
No Yes	Kineococcus radiotolerans SRS30216		17	17
No Yes	Catenulispora acidiphila DSM 44928		18	18
No Yes	Acidothermus cellulolyticus 11B		15	15
No Yes	Nakamurella multipartita DSM 44233		18	18
No Yes	Frankia sp. CcI3		19	18
No Yes	Frankia alni ACN14a		21	21
No Yes	Thermobifida fusca YX		15	15
No Yes	Streptomyces griseus ssp. griseus NBRC 13350		18	18
No Yes	Streptomyces avermitilis MA-4680		16	16
No Yes	Streptomyces coelicolor A3(2)		18	18
No Yes	Actinosynnema mirum DSM 43827		18	18
No Yes	Saccharomonospora viridis DSM 43017		16	16
No Yes	Saccharopolyspora erythraea NRRL 2338		19	19
No Yes	Nocardioides sp. JS614		17	17
No Yes	Propionibacterium acnes KPA171202		14	14
No Yes	Salinispora arenicola CNS-205		23	23
No Yes	Salinispora tropica CNB-440		19	19
No Yes	Rhodococcus jostii RHA1		15	15
No Yes	Rhodococcus opacus B4		16	16
No Yes	Rhodococcus erythropolis PR4		15	15
No Yes	Nocardia farcinica IFM 10152		18	18
No Yes	Mycobacterium abscessus		15	15
No Yes	Mycobacterium sp. MCS		15	15
No Yes	Mycobacterium avium ssp. paratuberculosis K-10		16	16
No Yes	Mycobacterium vanbaalenii PYR-1		15	15
No Yes	Mycobacterium tuberculosis H37Rv		15	15
No Yes	Mycobacterium bovis AF2122/97		15	15
No Yes	Mycobacterium ulcerans Agy99		14	14
No Yes	Mycobacterium gilvum PYR-GCK		15	15
No Yes	Mycobacterium marinum M		16	16
No Yes	Mycobacterium smegmatis MC2 155		15	15
No Yes	Mycobacterium leprae TN		14	14
No Yes	Corynebacterium aurimucosum		17	17
No Yes	Corynebacterium kroppenstedtii DSM 44385		15	15
No Yes	Corynebacterium efficiens YS-314		16	16
No Yes	Corynebacterium urealyticum DSM 7109		16	16
No Yes	Corynebacterium jeikeium K411		16	16
No Yes	Corynebacterium glutamicum ATCC 13032 Kitasato		16	16
No Yes	Corynebacterium diphtheriae NCTC 13129		16	16
No Yes	Tropheryma whipplei Twist		15	15
No Yes	Kytococcus sedentarius DSM 20547		13	13
No Yes	Beutenbergia cavernae DSM 12333		17	17
No Yes	Leifsonia xyli ssp. xyli CTCB07		14	14
No Yes	Clavibacter michiganensis ssp. michiganensis NCPPB 382		17	17
No Yes	Jonesia denitrificans DSM 20603		14	14
No Yes	Brachybacterium faecium DSM 4810		18	18
No Yes	Kocuria rhizophila DC2201		15	15
No Yes	Arthrobacter sp. FB24		19	19
No Yes	Arthrobacter chlorophenolicus A6		18	18
No Yes	Arthrobacter aurescens TC1		17	17
No Yes	Renibacterium salmoninarum ATCC 33209		16	16
No Yes	Micrococcus luteus NCTC 2665		15	15
No Yes	Cryptobacterium curtum DSM 15641		16	16
No Yes	Eggerthella lenta DSM 2243		15	15
No Yes	Slackia heliotrinireducens DSM 20476		15	15
No Yes	Atopobium parvulum DSM 20469		14	14
No Yes	Rubrobacter xylanophilus DSM 9941		17	17
No Yes	Acidimicrobium ferrooxidans DSM 10331		14	14
No Yes	Kosmotoga olearia TBF 19.5.1		15	15
No Yes	Petrotoga mobilis SJ95		15	15
No Yes	Fervidobacterium nodosum Rt17-B1		15	15
No Yes	Thermosipho melanesiensis BI429		16	16
No Yes	Thermosipho africanus TCF52B		16	16
No Yes	Thermotoga lettingae TMO		15	15
No Yes	Thermotoga sp. RQ2		16	16
No Yes	Thermotoga petrophila RKU-1		15	15
No Yes	Thermotoga neapolitana DSM 4359		15	15
No Yes	Thermotoga maritima MSB8		15	15
No Yes	Dehalococcoides sp. CBDB1		13	13
No Yes	Dehalococcoides ethenogenes 195		13	13
No Yes	Thermomicrobium roseum DSM 5159		13	13
No Yes	Herpetosiphon aurantiacus ATCC 23779		18	18
No Yes	Roseiflexus sp. RS-1		16	16
No Yes	Roseiflexus castenholzii DSM 13941		16	16
No Yes	Chloroflexus sp. Y-400-fl		18	18
No Yes	Chloroflexus aggregans DSM 9485		17	17
No Yes	Chloroflexus aurantiacus J-10-fl		18	18
No Yes	Sulfurihydrogenibium sp. YO3AOP1		15	15
No Yes	Sulfurihydrogenibium azorense Az-Fu1		15	15
No Yes	Persephonella marina EX-H1		16	16
No Yes	Hydrogenobaculum sp. Y04AAS1		16	16
No Yes	Aquifex aeolicus VF5		17	17
No Yes	Gemmatimonas aurantiaca T-27		16	16
No Yes	Candidatus Koribacter versatilis Ellin345		17	17
No Yes	Candidatus Solibacter usitatus Ellin6076		16	16
No Yes	Acidobacterium capsulatum ATCC 51196		16	16
No Yes	Elusimicrobium minutum Pei191		13	13
No Yes	uncultured Termite group 1 bacterium phylotype Rs-D17		15	15
No Yes	Pelodictyon phaeoclathratiforme BU-1		14	14
No Yes	Pelodictyon luteolum DSM 273		14	14
No Yes	Chlorobium chlorochromatii CaD3		15	15
No Yes	Chlorobium phaeobacteroides DSM 266		14	14
No Yes	Chlorobium phaeovibrioides DSM 265		14	14
No Yes	Chlorobium limicola DSM 245		14	14
No Yes	Chlorobaculum parvum NCIB 8327		14	14
No Yes	Chlorobium tepidum TLS		15	15
No Yes	Chloroherpeton thalassium ATCC 35110		14	14
No Yes	Prosthecochloris aestuarii DSM 271		14	14
No Yes	Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2		14	14
No Yes	Parabacteroides distasonis ATCC 8503		15	15
No Yes	Porphyromonas gingivalis W83		15	15
No Yes	Bacteroides vulgatus ATCC 8482		14	14
No Yes	Bacteroides thetaiotaomicron VPI-5482		15	15
No Yes	Bacteroides fragilis NCTC 9343		15	15
No Yes	Candidatus Amoebophilus asiaticus 5a2		9	9
No Yes	Salinibacter ruber DSM 13855		14	14
No Yes	Chitinophaga pinensis DSM 2588		17	17
No Yes	Dyadobacter fermentans DSM 18053		16	16
No Yes	Cytophaga hutchinsonii ATCC 33406		14	14
No Yes	Pedobacter heparinus DSM 2366		14	14
No Yes	Candidatus Sulcia muelleri GWSS		5	5
No Yes	Gramella forsetii KT0803		16	16
No Yes	Flavobacteriaceae bacterium 3519-10		16	16
No Yes	Capnocytophaga ochracea DSM 7271		14	14
No Yes	Flavobacterium psychrophilum JIP02/86		15	15
No Yes	Flavobacterium johnsoniae UW101		16	16
No Yes	Dictyoglomus turgidum DSM 6724		14	14
No Yes	Dictyoglomus thermophilum H-6-12		15	15
No Yes	Candidatus Protochlamydia amoebophila UWE25		11	11
No Yes	Chlamydophila pneumoniae TW-183		10	10
No Yes	Chlamydophila caviae GPIC		10	10
No Yes	Chlamydophila felis Fe/C-56		10	10
No Yes	Chlamydophila abortus S26/3		10	10
No Yes	Chlamydia muridarum Nigg		10	10
No Yes	Chlamydia trachomatis D/UW-3/CX		10	10
No Yes	Opitutus terrae PB90-1		20	20
No Yes	Methylacidiphilum infernorum V4		14	14
No Yes	Akkermansia muciniphila ATCC BAA-835		18	18
No Yes	Thermodesulfovibrio yellowstonii DSM 11347		15	15
No Yes	Leptotrichia buccalis DSM 1135		16	16
No Yes	Fusobacterium nucleatum ssp. nucleatum ATCC 25586		15	15
No Yes	Deinococcus deserti VCD115		18	18
No Yes	Deinococcus geothermalis DSM 11300		18	18
No Yes	Deinococcus radiodurans R1		18	18
No Yes	Thermus thermophilus HB27 (First sequenced)		15	15
No Yes	Natranaerobius thermophilus JW/NM-WN-LF		13	13
No Yes	Symbiobacterium thermophilum IAM 14863		15	15
No Yes	Anaerococcus prevotii DSM 20548		14	14
No Yes	Finegoldia magna ATCC 29328		13	13
No Yes	Anaerocellum thermophilum DSM 6725		17	17
No Yes	Candidatus Desulforudis audaxviator MP104C		15	15
No Yes	Pelotomaculum thermopropionicum SI		16	16
No Yes	Desulfitobacterium hafniense Y51		16	16
No Yes	Desulfotomaculum reducens MI-1		16	16
No Yes	Desulfotomaculum acetoxidans DSM 771		16	16
No Yes	Eubacterium rectale ATCC 33656		17	17
No Yes	Eubacterium eligens ATCC 27750		13	13
No Yes	Syntrophomonas wolfei ssp. wolfei Goettingen		15	15
No Yes	Heliobacterium modesticaldum Ice1		15	15
No Yes	Alkaliphilus oremlandii OhILAs		17	17
No Yes	Alkaliphilus metalliredigens QYMF		16	16
No Yes	Clostridium phytofermentans ISDg		17	17
No Yes	Clostridium novyi NT		15	15
No Yes	Clostridium kluyveri DSM 555		16	16
No Yes	Clostridium cellulolyticum H10		15	15
No Yes	Clostridium beijerinckii NCIMB 8052		18	18
No Yes	Clostridium thermocellum ATCC 27405		17	17
No Yes	Clostridium tetani E88		15	15
No Yes	Clostridium perfringens 13		17	17
No Yes	Clostridium difficile 630		15	15
No Yes	Clostridium botulinum A ATCC 3502		16	16
No Yes	Clostridium acetobutylicum ATCC 824		16	16
No Yes	Caldicellulosiruptor saccharolyticus DSM 8903		18	18
No Yes	Coprothermobacter proteolyticus DSM 5265		13	13
No Yes	Carboxydothermus hydrogenoformans Z-2901		14	14
No Yes	Moorella thermoacetica ATCC 39073		13	13
No Yes	Thermoanaerobacter pseudethanolicus ATCC 33223		15	15
No Yes	Thermoanaerobacter sp. X514		15	15
No Yes	Thermoanaerobacter tengcongensis MB4		14	14
No Yes	Halothermothrix orenii H 168		18	18
No Yes	Enterococcus faecalis V583		18	18
No Yes	Oenococcus oeni PSU-1		15	15
No Yes	Leuconostoc citreum KM20		17	17
No Yes	Leuconostoc mesenteroides ssp. mesenteroides ATCC 8293		14	14
No Yes	Lactobacillus casei ATCC 334		14	14
No Yes	Lactobacillus rhamnosus GG		14	14
No Yes	Lactobacillus johnsonii NCC 533		14	14
No Yes	Lactobacillus salivarius UCC118		13	13
No Yes	Lactobacillus fermentum IFO 3956		13	13
No Yes	Lactobacillus sakei ssp. sakei 23K		15	15
No Yes	Lactobacillus reuteri DSM 20016		13	13
No Yes	Lactobacillus gasseri ATCC 33323		14	14
No Yes	Lactobacillus plantarum WCFS1		18	18
No Yes	Lactobacillus helveticus DPC 4571		15	15
No Yes	Lactobacillus delbrueckii ssp. bulgaricus ATCC 11842		14	14
No Yes	Lactobacillus brevis ATCC 367		16	16
No Yes	Lactobacillus acidophilus NCFM		15	15
No Yes	Pediococcus pentosaceus ATCC 25745		14	14
No Yes	Lactococcus lactis ssp. lactis Il1403		18	18
No Yes	Streptococcus equi ssp. zooepidemicus MGCS10565		13	13
No Yes	Streptococcus dysgalactiae ssp. equisimilis GGS_124		14	14
No Yes	Streptococcus uberis 0140J		13	13
No Yes	Streptococcus pyogenes M1 GAS		14	14
No Yes	Streptococcus pneumoniae TIGR4 (Virulent)		13	13
No Yes	Streptococcus agalactiae NEM316		13	13
No Yes	Streptococcus mutans UA159		14	14
No Yes	Streptococcus thermophilus LMG 18311 (Older strain)		15	15
No Yes	Streptococcus suis 05ZYH33		15	15
No Yes	Streptococcus sanguinis SK36		14	14
No Yes	Streptococcus gordonii Challis subCH1		14	14
No Yes	Exiguobacterium sp. AT1b		15	15
No Yes	Exiguobacterium sibiricum 255-15		15	15
No Yes	Alicyclobacillus acidocaldarius ssp. acidocaldarius DSM 446		16	16
No Yes	Brevibacillus brevis NBRC 100599		19	19
No Yes	Paenibacillus sp. JDR-2		21	21
No Yes	Listeria welshimeri ser. 6b SLCC5334		16	16
No Yes	Listeria innocua Clip11262		16	16
No Yes	Listeria monocytogenes EGD-e		16	16
No Yes	Lysinibacillus sphaericus C3-41		19	19
No Yes	Oceanobacillus iheyensis HTE831		19	19
No Yes	Anoxybacillus flavithermus WK1		17	17
No Yes	Geobacillus sp. WCH70		15	15
No Yes	Geobacillus thermodenitrificans NG80-2		17	17
No Yes	Geobacillus kaustophilus HTA426		15	15
No Yes	Bacillus subtilis ssp. subtilis 168		18	18
No Yes	Bacillus licheniformis ATCC 14580		17	17
No Yes	Bacillus amyloliquefaciens FZB42		16	16
No Yes	Bacillus halodurans C-125		18	18
No Yes	Bacillus weihenstephanensis KBAB4		20	20
No Yes	Bacillus thuringiensis ser. konkukian 97-27		21	21
No Yes	Bacillus cereus ATCC 14579		18	18
No Yes	Bacillus anthracis Ames Ancestor		20	20
No Yes	Bacillus clausii KSM-K16		19	19
No Yes	Bacillus pumilus SAFR-032		16	16
No Yes	Macrococcus caseolyticus JCSC5402		15	15
No Yes	Staphylococcus saprophyticus ssp. saprophyticus ATCC 15305		16	16
No Yes	Staphylococcus haemolyticus JCSC1435		16	16
No Yes	Staphylococcus epidermidis RP62A		16	16
No Yes	Staphylococcus carnosus ssp. carnosus TM300		18	18
No Yes	Staphylococcus aureus ssp. aureus NCTC 8325		15	15
No Yes	Nautilia profundicola AmH		17	17
No Yes	Arcobacter butzleri RM4018		15	15
No Yes	Campylobacter hominis ATCC BAA-381		14	14
No Yes	Campylobacter lari RM2100		16	16
No Yes	Campylobacter curvus 525.92		17	17
No Yes	Campylobacter concisus 13826		15	15
No Yes	Campylobacter jejuni ssp. jejuni NCTC 11168		16	16
No Yes	Campylobacter fetus ssp. fetus 82-40		16	16
No Yes	Sulfurimonas denitrificans DSM 1251		17	17
No Yes	Wolinella succinogenes DSM 1740		16	16
No Yes	Helicobacter hepaticus ATCC 51449		15	15
No Yes	Helicobacter acinonychis Sheeba		15	15
No Yes	Helicobacter pylori 26695		15	15
No Yes	Nitratiruptor sp. SB155-2		17	17
No Yes	Sulfurovum sp. NBC37-1		16	16
No Yes	Bdellovibrio bacteriovorus HD100		16	16
No Yes	Syntrophus aciditrophicus SB		17	17
No Yes	Syntrophobacter fumaroxidans MPOB		20	20
No Yes	Desulfotalea psychrophila LSv54		16	16
No Yes	Desulfatibacillum alkenivorans AK-01		22	22
No Yes	Desulfobacterium autotrophicum HRM2		20	20
No Yes	Desulfococcus oleovorans Hxd3		17	17
No Yes	Desulfohalobium retbaense DSM 5692		18	18
No Yes	Desulfomicrobium baculatum DSM 4028		19	19
No Yes	Lawsonia intracellularis PHE/MN1-00		14	14
No Yes	Desulfovibrio magneticus RS-1		19	19
No Yes	Desulfovibrio vulgaris Hildenborough		17	17
No Yes	Desulfovibrio salexigens DSM 2638		19	19
No Yes	Desulfovibrio desulfuricans ssp. desulfuricans G20		17	17
No Yes	Pelobacter propionicus DSM 2379		18	18
No Yes	Pelobacter carbinolicus DSM 2380		18	18
No Yes	Geobacter uraniireducens Rf4		16	16
No Yes	Geobacter sp. FRC-32		16	16
No Yes	Geobacter lovleyi SZ		16	16
No Yes	Geobacter bemidjiensis Bem		17	17
No Yes	Geobacter sulfurreducens PCA		16	16
No Yes	Geobacter metallireducens GS-15		16	16
No Yes	Sorangium cellulosum So ce 56		20	20
No Yes	Anaeromyxobacter sp. Fw109-5		17	17
No Yes	Anaeromyxobacter dehalogenans 2CP-C		16	16
No Yes	Myxococcus xanthus DK 1622		19	19
No Yes	Magnetococcus sp. MC-1		16	16
No Yes	Aromatoleum aromaticum EbN1		16	16
No Yes	Dechloromonas aromatica RCB		16	16
No Yes	Thauera sp. MZ1T		16	16
No Yes	Laribacter hongkongensis HLHK9		17	17
No Yes	Chromobacterium violaceum ATCC 12472		17	17
No Yes	Neisseria meningitidis Z2491		16	16
No Yes	Neisseria gonorrhoeae FA 1090		16	16
No Yes	Methylotenera mobilis JLW8		17	17
No Yes	Methylovorus sp. SIP3-4		16	16
No Yes	Methylobacillus flagellatus KT		17	17
No Yes	Thiobacillus denitrificans ATCC 25259		18	18
No Yes	Candidatus Accumulibacter phosphatis clade IIA UW-1		17	17
No Yes	Methylibium petroleiphilum PM1		16	16
No Yes	Leptothrix cholodnii SP-6		15	15
No Yes	Ralstonia eutropha JMP134		18	18
No Yes	Cupriavidus taiwanensis		16	16
No Yes	Ralstonia metallidurans CH34		18	18
No Yes	Ralstonia pickettii 12J		16	16
No Yes	Ralstonia solanacearum GMI1000		17	17
No Yes	Polynucleobacter necessarius ssp. asymbioticus QLW-P1DMWA-1		16	16
No Yes	Burkholderia phytofirmans PsJN		19	19
No Yes	Burkholderia phymatum STM815		16	16
No Yes	Burkholderia thailandensis E264		17	17
No Yes	Burkholderia pseudomallei K96243		19	19
No Yes	Burkholderia mallei ATCC 23344		18	18
No Yes	Burkholderia sp. 383		21	21
No Yes	Burkholderia ambifaria AMMD		18	18
No Yes	Burkholderia cenocepacia AU 1054		18	18
No Yes	Burkholderia multivorans ATCC 17616		16	16
No Yes	Burkholderia vietnamiensis G4		18	18
No Yes	Burkholderia xenovorans LB400		17	17
No Yes	Burkholderia glumae BGR1		18	18
No Yes	Verminephrobacter eiseniae EF01-2		15	15
No Yes	Diaphorobacter sp. TPSY		15	15
No Yes	Delftia acidovorans SPH-1		15	15
No Yes	Polaromonas sp. JS666		16	16
No Yes	Polaromonas naphthalenivorans CJ2		16	16
No Yes	Variovorax paradoxus S110		16	16
No Yes	Rhodoferax ferrireducens T118		17	17
No Yes	Acidovorax sp. JS42		15	15
No Yes	Acidovorax citrulli AAC00-1		15	15
No Yes	Herminiimonas arsenicoxydans		15	15
No Yes	Janthinobacterium sp. Marseille		15	15
No Yes	Bordetella petrii DSM 12804		16	16
No Yes	Bordetella avium 197N		16	16
No Yes	Bordetella pertussis Tohama I		15	15
No Yes	Bordetella parapertussis 12822		16	16
No Yes	Bordetella bronchiseptica RB50		16	16
No Yes	Nitrosospira multiformis ATCC 25196		16	16
No Yes	Nitrosomonas eutropha C91		14	14
No Yes	Nitrosomonas europaea ATCC 19718		15	15
No Yes	Caulobacter sp. K31		16	16
No Yes	Caulobacter crescentus CB15		16	16
No Yes	Phenylobacterium zucineum HLK1		16	16
No Yes	Erythrobacter litoralis HTCC2594		16	16
No Yes	Sphingopyxis alaskensis RB2256		17	17
No Yes	Novosphingobium aromaticivorans DSM 12444		16	16
No Yes	Sphingomonas wittichii RW1		16	16
No Yes	Zymomonas mobilis ssp. mobilis ZM4		15	15
No Yes	Maricaulis maris MCS10		16	16
No Yes	Hirschia baltica ATCC 49814		15	15
No Yes	Hyphomonas neptunium ATCC 15444		17	17
No Yes	Dinoroseobacter shibae DFL 12		17	17
No Yes	Jannaschia sp. CCS1		18	18
No Yes	Ruegeria sp. TM1040		16	16
No Yes	Ruegeria pomeroyi DSS-3		17	17
No Yes	Roseobacter denitrificans OCh 114		16	16
No Yes	Rhodobacter sphaeroides 2.4.1		17	17
No Yes	Paracoccus denitrificans PD1222		20	20
No Yes	Magnetospirillum magneticum AMB-1		19	19
No Yes	Rhodospirillum centenum SW		17	17
No Yes	Rhodospirillum rubrum ATCC 11170		17	17
No Yes	Granulibacter bethesdensis CGDNIH1		17	17
No Yes	Gluconacetobacter diazotrophicus PAl 5		17	17
No Yes	Gluconobacter oxydans 621H		17	17
No Yes	Acetobacter pasteurianus IFO 3283-01		17	17
No Yes	Candidatus Pelagibacter ubique HTCC1062		16	16
No Yes	Neorickettsia sennetsu Miyayama		14	14
No Yes	Neorickettsia risticii Illinois		14	14
No Yes	Ehrlichia chaffeensis Arkansas		14	14
No Yes	Ehrlichia canis Jake		14	14
No Yes	Ehrlichia ruminantium Welgevonden		14	14
No Yes	Anaplasma phagocytophilum HZ		14	14
No Yes	Anaplasma marginale St. Maries		15	15
No Yes	Orientia tsutsugamushi Boryong		12	12
No Yes	Rickettsia bellii RML369-C		12	12
No Yes	Rickettsia canadensis McKiel		11	11
No Yes	Rickettsia typhi Wilmington		11	11
No Yes	Rickettsia prowazekii Madrid E		11	11
No Yes	Rickettsia peacockii Rustic		12	12
No Yes	Rickettsia felis URRWXCal2		12	12
No Yes	Rickettsia massiliae MTU5		11	11
No Yes	Rickettsia africae ESF-5		12	12
No Yes	Rickettsia akari Hartford		11	11
No Yes	Rickettsia rickettsii Sheila Smith		11	11
No Yes	Rickettsia conorii Malish 7		12	12
No Yes	Wolbachia endosymbiont of Culex_quinquefasciatus Pel		13	13
No Yes	Wolbachia endosymbiont of Drosophila melanogaster (Genus only)		13	13
No Yes	Wolbachia sp. wRi		13	13
No Yes	Xanthobacter autotrophicus Py2		17	17
No Yes	Azorhizobium caulinodans ORS 571		16	16
No Yes	Methylobacterium chloromethanicum CM4		16	16
No Yes	Methylobacterium extorquens PA1		16	16
No Yes	Methylobacterium sp. 4-46		16	16
No Yes	Methylobacterium populi BJ001		16	16
No Yes	Methylobacterium nodulans ORS 2060		17	17
No Yes	Methylobacterium radiotolerans JCM 2831		16	16
No Yes	Candidatus Hodgkinia cicadicola Dsem		5	5
No Yes	Ochrobactrum anthropi ATCC 49188		16	16
No Yes	Brucella microti CCM 4915		16	16
No Yes	Brucella canis ATCC 23365		16	16
No Yes	Brucella suis 1330		16	16
No Yes	Brucella melitensis bv. 1 16M		16	16
No Yes	Brucella ovis ATCC 25840		16	16
No Yes	Brucella abortus bv. 1 9-941		16	16
No Yes	Sinorhizobium medicae WSM419		14	14
No Yes	Sinorhizobium meliloti 1021		14	14
No Yes	Rhizobium etli CFN 42		13	13
No Yes	Rhizobium sp. NGR234		14	14
No Yes	Rhizobium leguminosarum bv. viciae 3841		16	16
No Yes	Agrobacterium vitis S4		14	14
No Yes	Agrobacterium radiobacter K84		16	16
No Yes	Agrobacterium tumefaciens C58		14	14
No Yes	Candidatus Liberibacter asiaticus psy62		12	12
No Yes	Chelativorans sp. BNC1		16	16
No Yes	Parvibaculum lavamentivorans DS-1		18	18
No Yes	Mesorhizobium loti MAFF303099		18	18
No Yes	Methylocella silvestris BL2		17	17
No Yes	Beijerinckia indica ssp. indica ATCC 9039		17	17
No Yes	Oligotropha carboxidovorans OM5		17	17
No Yes	Rhodopseudomonas palustris CGA009		18	18
No Yes	Nitrobacter winogradskyi Nb-255		17	17
No Yes	Nitrobacter hamburgensis X14		17	17
No Yes	Bradyrhizobium sp. ORS278		18	18
No Yes	Bradyrhizobium japonicum USDA 110		24	24
No Yes	Bartonella tribocorum CIP 105476		15	15
No Yes	Bartonella henselae Houston-1		15	15
No Yes	Bartonella grahamii as4aup		15	15
No Yes	Bartonella quintana Toulouse		15	15
No Yes	Bartonella bacilliformis KC583		16	16
No Yes	Acidithiobacillus ferrooxidans ATCC 23270		17	17
No Yes	Aggregatibacter aphrophilus NJ8700		15	15
No Yes	Haemophilus somnus 129PT		14	14
No Yes	Mannheimia succiniciproducens MBEL55E		15	15
No Yes	Pasteurella multocida ssp. multocida Pm70		14	14
No Yes	Haemophilus parasuis SH0165		14	14
No Yes	Haemophilus ducreyi 35000HP		14	14
No Yes	Haemophilus influenzae Rd KW20		14	14
No Yes	Actinobacillus succinogenes 130Z		16	16
No Yes	Actinobacillus pleuropneumoniae L20		14	14
No Yes	Tolumonas auensis DSM 9187		16	16
No Yes	Aeromonas salmonicida ssp. salmonicida A449		18	18
No Yes	Aeromonas hydrophila ssp. hydrophila ATCC 7966		18	18
No Yes	Aliivibrio salmonicida LFI1238		16	16
No Yes	Vibrio fischeri ES114		16	16
No Yes	Vibrio splendidus LGP32		17	17
No Yes	Vibrio vulnificus YJ016 (Good annotation)		17	17
No Yes	Vibrio parahaemolyticus RIMD 2210633		18	18
No Yes	Vibrio harveyi ATCC BAA-1116		20	20
No Yes	Vibrio cholerae O1 biov. El Tor N16961		17	17
No Yes	Photobacterium profundum SS9		21	21
No Yes	Psychromonas ingrahamii 37		16	16
No Yes	Idiomarina loihiensis L2TR		15	15
No Yes	Shewanella piezotolerans WP3		18	18
No Yes	Shewanella loihica PV-4		17	17
No Yes	Shewanella halifaxensis HAW-EB4		17	17
No Yes	Shewanella sediminis HAW-EB3		18	18
No Yes	Shewanella denitrificans OS217		17	17
No Yes	Shewanella pealeana ATCC 700345		17	17
No Yes	Shewanella oneidensis MR-1		16	16
No Yes	Shewanella baltica OS155		17	17
No Yes	Shewanella woodyi ATCC 51908		17	17
No Yes	Shewanella sp. MR-7		16	16
No Yes	Shewanella amazonensis SB2B		16	16
No Yes	Shewanella frigidimarina NCIMB 400		18	18
No Yes	Shewanella putrefaciens CN-32		16	16
No Yes	Colwellia psychrerythraea 34H		16	16
No Yes	Pseudoalteromonas atlantica T6c		17	17
No Yes	Pseudoalteromonas haloplanktis TAC125		17	17
No Yes	Teredinibacter turnerae T7901		15	15
No Yes	Saccharophagus degradans 2-40		15	15
No Yes	Marinobacter aquaeolei VT8		16	16
No Yes	Alteromonas macleodii Deep ecotype		16	16
No Yes	Hahella chejuensis KCTC 2396		19	19
No Yes	Alcanivorax borkumensis SK2		17	17
No Yes	Marinomonas sp. MWYL1		18	18
No Yes	Chromohalobacter salexigens DSM 3043		17	17
No Yes	Methylococcus capsulatus Bath		16	16
No Yes	Dichelobacter nodosus VCS1703A		14	14
No Yes	Stenotrophomonas maltophilia R551-3		15	15
No Yes	Xylella fastidiosa 9a5c		14	14
No Yes	Xanthomonas axonopodis pv. citri 306		16	16
No Yes	Xanthomonas oryzae pv. oryzae KACC10331		14	14
No Yes	Xanthomonas campestris pv. campestris ATCC 33913 (Completed 2001)		16	16
No Yes	Alkalilimnicola ehrlichii MLHE-1		16	16
No Yes	Thioalkalivibrio sp. HL-EbGR7		16	16
No Yes	Halorhodospira halophila SL1		16	16
No Yes	Nitrosococcus oceani ATCC 19707		16	16
No Yes	Coxiella burnetii RSA 493		17	17
No Yes	Legionella pneumophila ssp. pneumophila Philadelphia 1		14	14
No Yes	Kangiella koreensis DSM 16069		18	18
No Yes	Baumannia cicadellinicola Hc		14	14
No Yes	Candidatus Carsonella ruddii PV		8	8
No Yes	Candidatus Vesicomyosocius okutanii HA		15	15
No Yes	Candidatus Ruthia magnifica Cm		16	16
No Yes	Cronobacter sakazakii ATCC BAA-894		19	19
No Yes	Dickeya zeae Ech1591		19	19
No Yes	Dickeya dadantii Ech703		19	19
No Yes	Candidatus Hamiltonella defensa 5AT		15	15
No Yes	Candidatus Blochmannia pennsylvanicus BPEN		13	13
No Yes	Pectobacterium atrosepticum SCRI1043		18	18
No Yes	Pectobacterium carotovorum ssp. carotovorum PC1		19	19
No Yes	Sodalis glossinidius morsitans		16	16
No Yes	Wigglesworthia glossinidia		14	14
No Yes	Buchnera aphidicola APS		14	14
No Yes	Photorhabdus asymbiotica		20	20
No Yes	Photorhabdus luminescens ssp. laumondii TTO1		21	21
No Yes	Edwardsiella ictaluri 93-146		18	18
No Yes	Yersinia pseudotuberculosis IP 32953		17	17
No Yes	Yersinia pestis CO92		17	17
No Yes	Yersinia enterocolitica ssp. enterocolitica 8081		18	18
No Yes	Shigella sonnei Ss046		17	17
No Yes	Shigella flexneri 2a 2457T		18	18
No Yes	Shigella dysenteriae Sd197		17	17
No Yes	Shigella boydii Sb227		18	18
No Yes	Serratia proteamaculans 568		19	19
No Yes	Salmonella enterica ssp. enterica ser. Typhimurium LT2		20	20
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi A ATCC 9150		20	20
No Yes	Proteus mirabilis HI4320		17	17
No Yes	Klebsiella pneumoniae ssp. pneumoniae MGH 78578		19	19
No Yes	Escherichia fergusonii ATCC 35469		19	19
No Yes	Escherichia coli K-12 subMG1655		18	18
No Yes	Erwinia tasmaniensis Et1/99		17	17
No Yes	Enterobacter sp. 638		19	19
No Yes	Citrobacter koseri ATCC BAA-895		20	20
No Yes	Azotobacter vinelandii DJ		16	16
No Yes	Pseudomonas entomophila L48		17	17
No Yes	Pseudomonas syringae pv. tomato DC3000		17	17
No Yes	Pseudomonas stutzeri A1501		17	17
No Yes	Pseudomonas putida KT2440		16	16
No Yes	Pseudomonas fluorescens Pf-5		17	17
No Yes	Pseudomonas mendocina ymp		18	18
No Yes	Pseudomonas aeruginosa PAO1		18	18
No Yes	Cellvibrio japonicus Ueda107		16	16
No Yes	Psychrobacter sp. PRwf-1		18	18
No Yes	Psychrobacter arcticus 273-4		17	17
No Yes	Psychrobacter cryohalolentis K5		18	18
No Yes	Acinetobacter sp. ADP1		15	15
No Yes	Acinetobacter baumannii ATCC 17978		15	15
No Yes	Thiomicrospira crunogena XCL-2		15	15
No Yes	Francisella philomiragia ssp. philomiragia ATCC 25017		15	15
No Yes	Francisella tularensis ssp. tularensis SCHU S4		14	14
No Yes	Gloeobacter violaceus PCC 7421		16	16
No Yes	Acaryochloris marina MBIC11017		14	14
No Yes	Prochlorococcus marinus MIT 9313		15	15
No Yes	Nostoc punctiforme PCC 73102		16	16
No Yes	Nostoc sp. PCC 7120		15	15
No Yes	Anabaena variabilis ATCC 29413		15	15
No Yes	Trichodesmium erythraeum IMS101		15	15
No Yes	Thermosynechococcus elongatus BP-1		15	15
No Yes	Cyanothece sp. ATCC 51142		15	15
No Yes	Synechocystis sp. PCC 6803		15	15
No Yes	Synechococcus elongatus PCC 6301		17	17
No Yes	Microcystis aeruginosa NIES-843		15	15
No Yes	Nitrosopumilus maritimus SCM1		16	16
No Yes	Nanoarchaeum equitans Kin4-M		11	11
No Yes	Candidatus Korarchaeum cryptofilum OPF8		14	14
No Yes	Methanosaeta thermophila PT		12	12
No Yes	Methanococcoides burtonii DSM 6242		13	13
No Yes	Methanosarcina acetivorans C2A		14	14
No Yes	Methanosarcina mazei Go1		14	14
No Yes	Methanosarcina barkeri Fusaro		13	13
No Yes	Methanosphaerula palustris E1-9c		12	12
No Yes	Candidatus Methanoregula boonei 6A8		12	12
No Yes	Methanospirillum hungatei JF-1		12	12
No Yes	Methanocorpusculum labreanum Z		13	13
No Yes	Methanoculleus marisnigri JR1		11	11
No Yes	Methanopyrus kandleri AV19		12	12
No Yes	Archaeoglobus fulgidus DSM 4304		15	15
No Yes	Thermococcus onnurineus NA1		14	14
No Yes	Thermococcus kodakarensis KOD1		13	13
No Yes	Thermococcus gammatolerans EJ3		13	13
No Yes	Thermococcus sibiricus MM 739		13	13
No Yes	Pyrococcus horikoshii OT3		13	13
No Yes	Pyrococcus abyssi GE5		14	14
No Yes	Pyrococcus furiosus DSM 3638		15	15
No Yes	Thermoplasma volcanium GSS1		13	13
No Yes	Thermoplasma acidophilum DSM 1728		13	13
No Yes	Picrophilus torridus DSM 9790		13	13
No Yes	Haloquadratum walsbyi DSM 16790		13	13
No Yes	Halomicrobium mukohataei DSM 12286		14	14
No Yes	Halorhabdus utahensis DSM 12940		14	14
No Yes	Natronomonas pharaonis DSM 2160		14	14
No Yes	Halorubrum lacusprofundi ATCC 49239		13	13
No Yes	Halobacterium salinarum R1		13	13
No Yes	Halobacterium sp. NRC-1		13	13
No Yes	Haloarcula marismortui ATCC 43049		15	15
No Yes	Methanocaldococcus fervens AG86		14	14
No Yes	Methanocaldococcus jannaschii DSM 2661		13	13
No Yes	Methanococcus aeolicus Nankai-3		15	15
No Yes	Methanococcus maripaludis S2		14	14
No Yes	Methanococcus vannielii SB		15	15
No Yes	Methanothermobacter thermautotrophicus Delta H		14	14
No Yes	Methanosphaera stadtmanae DSM 3091		14	14
No Yes	Methanobrevibacter smithii ATCC 35061		16	16
No Yes	uncultured methanogenic archaeon RC-I		14	14
No Yes	Hyperthermus butylicus DSM 5456		14	14
No Yes	Aeropyrum pernix K1		14	14
No Yes	Ignicoccus hospitalis KIN4/I		14	14
No Yes	Staphylothermus marinus F1		14	14
No Yes	Desulfurococcus kamchatkensis 1221n		14	14
No Yes	Metallosphaera sedula DSM 5348		13	13
No Yes	Sulfolobus tokodaii 7		14	14
No Yes	Sulfolobus islandicus Y.N.15.51		13	13
No Yes	Sulfolobus solfataricus P2		13	13
No Yes	Sulfolobus acidocaldarius DSM 639		14	14
No Yes	Thermofilum pendens Hrk 5		14	14
No Yes	Caldivirga maquilingensis IC-167		14	14
No Yes	Pyrobaculum calidifontis JCM 11548		15	15
No Yes	Pyrobaculum arsenaticum DSM 13514		15	15
No Yes	Pyrobaculum aerophilum IM2		15	15
No Yes	Pyrobaculum islandicum DSM 4184		15	15
No Yes	Thermoproteus neutrophilus V24Sta		14	14
No Yes	Drosophila melanogaster FlyBase 5.12 (all transcripts) (FlyBase)	Fruit fly	44	41
No Yes	Caenorhabditis elegans WormBase WS194 (all transcripts) (WormBase)	Nematode	41	37
No Yes	Cryptococcus neoformans var. grubii H99		20	20
No Yes	Cryptococcus neoformans B-3501A		20	20
No Yes	Schizosaccharomyces pombe 972h-		24	24
No Yes	Ajellomyces dermatitidis ER-3		29	27
No Yes	Histoplasma capsulatum H143		28	27
No Yes	Histoplasma capsulatum H88		27	26
No Yes	Histoplasma capsulatum G186AR		26	25
No Yes	Paracoccidioides brasiliensis Pb01		25	24
No Yes	Paracoccidioides brasiliensis Pb03		24	23
No Yes	Coccidioides posadasii str. Silveira		24	23
No Yes	Coccidioides immitis RMSCC 3703		23	23
No Yes	Coccidioides immitis RMSCC 2394		25	24
No Yes	Coccidioides immitis H538.4		25	24
No Yes	Aspergillus fumigatus A1163		23	22
No Yes	Candida albicans WO-1		23	22
No Yes	Saccharomyces cerevisiae YJM789		26	25
No Yes	Saccharomyces cerevisiae RM11-1a		26	25
No Yes	Saccharomyces cerevisiae Ensembl 49_1h (all transcripts)	Baker's yeast	26	25
No Yes	Batrachochytrium dendrobatidis JAM81		18	17
No Yes	Oryza sativa ssp. Indica (Subspecies)	Indian rice	66	62
No Yes	Plasmodium falciparum HB3		24	22
No Yes	Plasmodium falciparum Dd2		18	18
No Yes	Candidatus Phytoplasma australiense		11	11
No Yes	Ureaplasma parvum ser. 3 ATCC 27815		11	11
No Yes	Mycoplasma hyopneumoniae 7448		12	12
No Yes	Mycoplasma hyopneumoniae J		12	12
No Yes	Leptospira borgpetersenii ser. Hardjo-bovis JB197		14	14
No Yes	Leptospira interrogans ser. Copenhageni Fiocruz L1-130		15	15
No Yes	Leptospira biflexa ser. Patoc Patoc 1 (Ames)		15	15
No Yes	Treponema pallidum ssp. pallidum SS14		13	13
No Yes	Borrelia burgdorferi ZS7		12	12
No Yes	Bifidobacterium longum ssp. infantis ATCC 15697		13	13
No Yes	Bifidobacterium longum		13	13
No Yes	Bifidobacterium animalis ssp. lactis Bl-04		13	13
No Yes	Bifidobacterium animalis ssp. lactis DSM 10140		13	13
No Yes	Frankia sp. EAN1pec		16	16
No Yes	Mycobacterium sp. KMS		15	15
No Yes	Mycobacterium sp. JLS		15	15
No Yes	Mycobacterium avium 104		13	13
No Yes	Mycobacterium tuberculosis KZN 1435		15	15
No Yes	Mycobacterium tuberculosis H37Ra		15	15
No Yes	Mycobacterium tuberculosis F11		15	15
No Yes	Mycobacterium tuberculosis CDC1551		15	15
No Yes	Mycobacterium bovis BCG Tokyo 172		15	15
No Yes	Mycobacterium bovis BCG Pasteur 1173P2		15	15
No Yes	Mycobacterium leprae Br4923		14	14
No Yes	Corynebacterium glutamicum R		16	16
No Yes	Corynebacterium glutamicum ATCC 13032 Bielefeld		16	16
No Yes	Tropheryma whipplei TW08/27		15	15
No Yes	Clavibacter michiganensis ssp. sepedonicus		17	17
No Yes	Dehalococcoides sp. BAV1		13	13
No Yes	Chlorobium phaeobacteroides BS1		16	16
No Yes	Porphyromonas gingivalis ATCC 33277		15	15
No Yes	Bacteroides fragilis YCH46		16	16
No Yes	Candidiatus Sulcia muelleri SMDSEM		8	8
No Yes	Chlamydophila pneumoniae J138		10	10
No Yes	Chlamydophila pneumoniae CWL029		10	10
No Yes	Chlamydophila pneumoniae AR39		10	10
No Yes	Chlamydia trachomatis B/Jali20/OT		10	10
No Yes	Chlamydia trachomatis L2b/UCH-1/proctitis		10	10
No Yes	Chlamydia trachomatis 434/Bu		10	10
No Yes	Chlamydia trachomatis A/HAR-13		10	10
No Yes	Thermus thermophilus HB8		15	15
No Yes	Desulfitobacterium hafniense DCB-2		16	16
No Yes	Clostridium kluyveri NBRC 12016		16	16
No Yes	Clostridium perfringens SM101		16	16
No Yes	Clostridium perfringens ATCC 13124		15	15
No Yes	Clostridium botulinum F Langeland		16	16
No Yes	Clostridium botulinum E3 Alaska E43		15	15
No Yes	Clostridium botulinum B1 Okra		16	16
No Yes	Clostridium botulinum Ba4 657		16	16
No Yes	Clostridium botulinum B Eklund 17B		14	14
No Yes	Clostridium botulinum A2 Kyoto		16	16
No Yes	Clostridium botulinum A3 Loch Maree		16	16
No Yes	Clostridium botulinum A Hall		16	16
No Yes	Clostridium botulinum A ATCC 19397		16	16
No Yes	Lactobacillus casei BL23		14	14
No Yes	Lactobacillus rhamnosus Lc 705		14	14
No Yes	Lactobacillus reuteri JCM 1112		14	14
No Yes	Lactobacillus plantarum JDM1		17	17
No Yes	Lactobacillus delbrueckii ssp. bulgaricus ATCC BAA-365		14	14
No Yes	Lactococcus lactis ssp. cremoris MG1363		16	16
No Yes	Lactococcus lactis ssp. cremoris SK11		15	15
No Yes	Streptococcus equi ssp. equi 4047		14	14
No Yes	Streptococcus equi ssp. zooepidemicus		14	14
No Yes	Streptococcus pyogenes MGAS10750		14	14
No Yes	Streptococcus pyogenes MGAS10270		15	15
No Yes	Streptococcus pyogenes MGAS2096		15	15
No Yes	Streptococcus pyogenes MGAS9429		14	14
No Yes	Streptococcus pyogenes MGAS6180		14	14
No Yes	Streptococcus pyogenes NZ131		14	14
No Yes	Streptococcus pyogenes MGAS8232		14	14
No Yes	Streptococcus pyogenes MGAS10394		14	14
No Yes	Streptococcus pyogenes Manfredo		14	14
No Yes	Streptococcus pyogenes MGAS315		14	14
No Yes	Streptococcus pyogenes SSI-1		14	14
No Yes	Streptococcus pyogenes MGAS5005		14	14
No Yes	Streptococcus pneumoniae ATCC 700669		13	13
No Yes	Streptococcus pneumoniae CGSP14		14	14
No Yes	Streptococcus pneumoniae G54		13	13
No Yes	Streptococcus pneumoniae P1031		13	13
No Yes	Streptococcus pneumoniae JJA		13	13
No Yes	Streptococcus pneumoniae 70585		14	14
No Yes	Streptococcus pneumoniae Hungary19A-6		13	13
No Yes	Streptococcus pneumoniae Taiwan19F-14		13	13
No Yes	Streptococcus pneumoniae D39		13	13
No Yes	Streptococcus pneumoniae R6 (Non-virulent)		13	13
No Yes	Streptococcus agalactiae A909		13	13
No Yes	Streptococcus agalactiae 2603V/R		13	13
No Yes	Streptococcus thermophilus LMD-9		14	14
No Yes	Streptococcus thermophilus CNRZ1066 (Younger strain)		15	15
No Yes	Streptococcus suis BM407		14	14
No Yes	Streptococcus suis SC84		14	14
No Yes	Streptococcus suis 98HAH33		14	14
No Yes	Streptococcus suis P1/7		14	14
No Yes	Listeria monocytogenes Clip80459		16	16
No Yes	Listeria monocytogenes HCC23		16	16
No Yes	Listeria monocytogenes 4b F2365		16	16
No Yes	Bacillus licheniformis ATCC 14580		17	17
No Yes	Bacillus cytotoxicus NVH 391-98		18	18
No Yes	Bacillus thuringiensis Al Hakam		21	21
No Yes	Bacillus cereus 03BB102		22	22
No Yes	Bacillus cereus AH820		20	20
No Yes	Bacillus cereus AH187		21	21
No Yes	Bacillus cereus B4264		21	21
No Yes	Bacillus cereus G9842		21	21
No Yes	Bacillus cereus Q1		21	21
No Yes	Bacillus cereus E33L		20	20
No Yes	Bacillus cereus ATCC 10987		21	21
No Yes	Bacillus anthracis A0248		20	20
No Yes	Bacillus anthracis CDC 684		20	20
No Yes	Bacillus anthracis Sterne		20	20
No Yes	Bacillus anthracis Ames		20	20
No Yes	Staphylococcus epidermidis ATCC 12228		16	16
No Yes	Staphylococcus aureus RF122		15	15
No Yes	Staphylococcus aureus ssp. aureus Newman		15	15
No Yes	Staphylococcus aureus ssp. aureus Mu3		15	15
No Yes	Staphylococcus aureus ssp. aureus USA300_TCH1516		15	15
No Yes	Staphylococcus aureus ssp. aureus USA300_FPR3757		15	15
No Yes	Staphylococcus aureus ssp. aureus JH1		15	15
No Yes	Staphylococcus aureus ssp. aureus JH9		15	15
No Yes	Staphylococcus aureus ssp. aureus MSSA476		15	15
No Yes	Staphylococcus aureus ssp. aureus MRSA252		15	15
No Yes	Staphylococcus aureus ssp. aureus MW2		15	15
No Yes	Staphylococcus aureus ssp. aureus N315		15	15
No Yes	Staphylococcus aureus ssp. aureus Mu50		15	15
No Yes	Staphylococcus aureus ssp. aureus COL		15	15
No Yes	Campylobacter jejuni RM1221		16	16
No Yes	Campylobacter jejuni ssp. jejuni 81116		17	17
No Yes	Campylobacter jejuni ssp. jejuni 81-176		16	16
No Yes	Campylobacter jejuni ssp. doylei 269.97		15	15
No Yes	Helicobacter pylori B38		15	15
No Yes	Helicobacter pylori P12		15	15
No Yes	Helicobacter pylori G27		15	15
No Yes	Helicobacter pylori Shi470		15	15
No Yes	Helicobacter pylori HPAG1		15	15
No Yes	Helicobacter pylori J99		15	15
No Yes	Desulfovibrio vulgaris DP4		17	17
No Yes	Desulfovibrio vulgaris Miyazaki F		17	17
No Yes	Desulfovibrio desulfuricans ssp. desulfuricans ATCC 27774		17	17
No Yes	Geobacter sp. M21		17	17
No Yes	Anaeromyxobacter sp. K		17	17
No Yes	Anaeromyxobacter dehalogenans 2CP-1		16	16
No Yes	Azoarcus sp. BH72		17	17
No Yes	Neisseria meningitidis alpha14		16	16
No Yes	Neisseria meningitidis 053442		16	16
No Yes	Neisseria meningitidis FAM18		16	16
No Yes	Neisseria meningitidis MC58		16	16
No Yes	Neisseria gonorrhoeae NCCP11945		16	16
No Yes	Ralstonia eutropha H16		16	16
No Yes	Ralstonia pickettii 12D		16	16
No Yes	Polynucleobacter necessarius ssp. necessarius STIR1		15	15
No Yes	Burkholderia pseudomallei MSHR346		16	16
No Yes	Burkholderia pseudomallei 1106a		19	19
No Yes	Burkholderia pseudomallei 668		19	19
No Yes	Burkholderia pseudomallei 1710b		19	19
No Yes	Burkholderia mallei NCTC 10229		19	19
No Yes	Burkholderia mallei NCTC 10247		19	19
No Yes	Burkholderia mallei SAVP1		18	18
No Yes	Burkholderia ambifaria MC40-6		18	18
No Yes	Burkholderia cenocepacia MC0-3		18	18
No Yes	Burkholderia cenocepacia HI2424		18	18
No Yes	Burkholderia cenocepacia J2315		18	18
No Yes	Burkholderia multivorans ATCC 17616		16	16
No Yes	Caulobacter crescentus NA1000		16	16
No Yes	Rhodobacter sphaeroides KD131		17	17
No Yes	Rhodobacter sphaeroides ATCC 17025		17	17
No Yes	Rhodobacter sphaeroides ATCC 17029		17	17
No Yes	Gluconacetobacter diazotrophicus PAl 5		17	17
No Yes	Ehrlichia ruminantium Gardel		14	14
No Yes	Ehrlichia ruminantium Welgevonden		14	14
No Yes	Anaplasma marginale Florida		15	15
No Yes	Orientia tsutsugamushi Ikeda		11	11
No Yes	Rickettsia bellii OSU 85-389		10	10
No Yes	Rickettsia rickettsii Iowa		11	11
No Yes	Wolbachia endosymbiont TRS of Brugia malayi (Genus only)		13	13
No Yes	Methylobacterium extorquens DM4		16	16
No Yes	Methylobacterium extorquens AM1		16	16
No Yes	Brucella suis ATCC 23445		16	16
No Yes	Brucella melitensis ATCC 23457		16	16
No Yes	Brucella abortus S19		16	16
No Yes	Brucella melitensis biov. Abortus 2308		16	16
No Yes	Rhizobium etli CIAT 652		13	13
No Yes	Rhizobium leguminosarum bv. trifolii WSM2304		13	13
No Yes	Rhizobium leguminosarum bv. trifolii WSM1325		15	15
No Yes	Rhodopseudomonas palustris TIE-1		18	18
No Yes	Rhodopseudomonas palustris HaA2		18	18
No Yes	Rhodopseudomonas palustris BisB5		17	17
No Yes	Rhodopseudomonas palustris BisB18		17	17
No Yes	Rhodopseudomonas palustris BisA53		19	19
No Yes	Bradyrhizobium sp. BTAi1		18	18
No Yes	Acidithiobacillus ferrooxidans ATCC 53993		17	17
No Yes	Haemophilus somnus 2336		14	14
No Yes	Haemophilus influenzae PittGG		15	15
No Yes	Haemophilus influenzae PittEE		12	12
No Yes	Haemophilus influenzae 86-028NP		15	15
No Yes	Actinobacillus pleuropneumoniae ser. 3 JL03		15	15
No Yes	Actinobacillus pleuropneumoniae ser. 7 AP76		15	15
No Yes	Vibrio fischeri MJ11		16	16
No Yes	Vibrio vulnificus CMCP6 (Poor annotation)		19	19
No Yes	Vibrio cholerae M66-2		18	18
No Yes	Vibrio cholerae O395		18	18
No Yes	Vibrio cholerae MJ-1236		18	18
No Yes	Shewanella sp. W3-18-1		16	16
No Yes	Shewanella sp. ANA-3		17	17
No Yes	Shewanella baltica OS223		16	16
No Yes	Shewanella baltica OS185		16	16
No Yes	Shewanella baltica OS195		16	16
No Yes	Shewanella sp. MR-4		16	16
No Yes	Stenotrophomonas maltophilia K279a		17	17
No Yes	Xylella fastidiosa M23		14	14
No Yes	Xylella fastidiosa M12		14	14
No Yes	Xylella fastidiosa Temecula1		14	14
No Yes	Xanthomonas campestris pv. vesicatoria 85-10 (Completed 2005)		16	16
No Yes	Xanthomonas oryzae pv. oryzae PXO99A		16	16
No Yes	Xanthomonas oryzae pv. oryzae MAFF 311018		16	16
No Yes	Xanthomonas campestris pv. campestris B100		16	16
No Yes	Xanthomonas campestris pv. campestris 8004 (Completed 2005)		16	16
No Yes	Coxiella burnetii CbuK_Q154		17	17
No Yes	Coxiella burnetii CbuG_Q212		17	17
No Yes	Coxiella burnetii Dugway 5J108-111		17	17
No Yes	Coxiella burnetii RSA 331		17	17
No Yes	Legionella pneumophila Corby		14	14
No Yes	Legionella pneumophila Paris		14	14
No Yes	Legionella pneumophila Lens		15	15
No Yes	Candidatus Blochmannia floridanus		12	12
No Yes	Buchnera aphidicola Cc		10	10
No Yes	Buchnera aphidicola Bp		10	10
No Yes	Buchnera aphidicola Tuc7		14	14
No Yes	Buchnera aphidicola 5A		14	14
No Yes	Buchnera aphidicola Sg		14	14
No Yes	Yersinia pseudotuberculosis PB1/+		17	17
No Yes	Yersinia pseudotuberculosis YPIII		17	17
No Yes	Yersinia pseudotuberculosis IP 31758		17	17
No Yes	Yersinia pestis Pestoides F		17	17
No Yes	Yersinia pestis Nepal516		17	17
No Yes	Yersinia pestis Antiqua		17	17
No Yes	Yersinia pestis Angola		17	17
No Yes	Yersinia pestis biov. Microtus 91001		17	17
No Yes	Yersinia pestis KIM		16	16
No Yes	Shigella flexneri 5 8401		17	17
No Yes	Shigella flexneri 2a 301		18	18
No Yes	Shigella boydii CDC 3083-94		18	18
No Yes	Salmonella enterica ssp. arizonae ser. 62:z4,z23:--		18	18
No Yes	Salmonella enterica ssp. enterica ser. Schwarzengrund CVM19633		20	20
No Yes	Salmonella enterica ssp. enterica ser. Enteritidis P125109		20	20
No Yes	Salmonella enterica ssp. enterica ser. Choleraesuis str. SC-B67		20	20
No Yes	Salmonella enterica ssp. enterica ser. Newport SL254		20	20
No Yes	Salmonella enterica ssp. enterica ser. Dublin CT_02021853		20	20
No Yes	Salmonella enterica ssp. enterica ser. Typhi CT18		20	20
No Yes	Salmonella enterica ssp. enterica ser. Typhi Ty2		20	20
No Yes	Salmonella enterica ssp. enterica ser. Agona SL483		20	20
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi C RKS4594		20	20
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi B SPB7		20	20
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi A AKU_12601		20	20
No Yes	Salmonella enterica ssp. enterica ser. Heidelberg SL476		20	20
No Yes	Salmonella enterica ssp. enterica ser. Gallinarum 287/91		20	20
No Yes	Klebsiella pneumoniae 342		19	19
No Yes	Klebsiella pneumoniae NTUH-K2044		18	18
No Yes	Escherichia coli ED1a		19	19
No Yes	Escherichia coli IAI39		18	18
No Yes	Escherichia coli UMN026		19	19
No Yes	Escherichia coli 55989		18	18
No Yes	Escherichia coli S88		19	19
No Yes	Escherichia coli IAI1		18	18
No Yes	Escherichia coli BL21		18	18
No Yes	Escherichia coli ATCC 8739		19	19
No Yes	Escherichia coli BL21(DE3)		18	18
No Yes	Escherichia coli SMS-3-5		19	19
No Yes	Escherichia coli SE11		18	18
No Yes	Escherichia coli APEC O1		18	18
No Yes	Escherichia coli UTI89		19	19
No Yes	Escherichia coli 536		18	18
No Yes	Escherichia coli HS		18	18
No Yes	Escherichia coli E24377A		17	17
No Yes	Escherichia coli CFT073		20	20
No Yes	Escherichia coli O127:H6 E2348/69		19	19
No Yes	Escherichia coli O157:H7 EDL933		18	18
No Yes	Escherichia coli O157:H7 TW14359		18	18
No Yes	Escherichia coli O157:H7 EC4115		18	18
No Yes	Escherichia coli O157:H7 Sakai		18	18
No Yes	Escherichia coli BW2952		18	18
No Yes	Escherichia coli K-12 subW3110		18	18
No Yes	Escherichia coli K-12 subDH10B		21	21
No Yes	Escherichia coli B REL606		18	18
No Yes	Pseudomonas syringae pv. phaseolicola 1448A		17	17
No Yes	Pseudomonas syringae pv. syringae B728a		17	17
No Yes	Pseudomonas putida W619		16	16
No Yes	Pseudomonas putida F1		16	16
No Yes	Pseudomonas putida GB-1		16	16
No Yes	Pseudomonas fluorescens SBW25		16	16
No Yes	Pseudomonas fluorescens Pf0-1		16	16
No Yes	Pseudomonas aeruginosa LESB58		18	18
No Yes	Pseudomonas aeruginosa PA7		18	18
No Yes	Pseudomonas aeruginosa UCBPP-PA14		18	18
No Yes	Acinetobacter baumannii AB307-0294		15	15
No Yes	Acinetobacter baumannii AYE		15	15
No Yes	Acinetobacter baumannii SDF		15	15
No Yes	Acinetobacter baumannii AB0057		15	15
No Yes	Acinetobacter baumannii ACICU		15	15
No Yes	Francisella novicida U112		14	14
No Yes	Francisella tularensis ssp. mediasiatica FSC147		13	13
No Yes	Francisella tularensis ssp. holarctica FTNF002-00		14	14
No Yes	Francisella tularensis ssp. holarctica OSU18		14	14
No Yes	Francisella tularensis ssp. holarctica		14	14
No Yes	Francisella tularensis ssp. tularensis WY96-3418		14	14
No Yes	Francisella tularensis ssp. tularensis FSC198		14	14
No Yes	Prochlorococcus marinus NATL1A		14	14
No Yes	Prochlorococcus marinus MIT 9301		14	14
No Yes	Prochlorococcus marinus MIT 9515		14	14
No Yes	Prochlorococcus marinus AS9601		15	15
No Yes	Prochlorococcus marinus ssp. marinus CCMP1375		16	16
No Yes	Prochlorococcus marinus ssp. pastoris CCMP1986		15	15
No Yes	Prochlorococcus marinus MIT 9215		14	14
No Yes	Prochlorococcus marinus MIT 9211		15	15
No Yes	Prochlorococcus marinus MIT 9312		14	14
No Yes	Prochlorococcus marinus MIT 9303		16	16
No Yes	Prochlorococcus marinus NATL2A		14	14
No Yes	Cyanothece sp. PCC 8802		14	14
No Yes	Cyanothece sp. PCC 7425		15	15
No Yes	Cyanothece sp. PCC 7424		15	15
No Yes	Cyanothece sp. PCC 8801		14	14
No Yes	Synechococcus sp. JA-2-3Ba(2-13) (Poor annotation)		14	14
No Yes	Synechococcus sp. JA-3-3Ab (Poor annotation)		14	14
No Yes	Synechococcus sp. CC9902 (Poor annotation)		15	15
No Yes	Synechococcus sp. RCC307		15	15
No Yes	Synechococcus sp. CC9605 (Poor annotation)		15	15
No Yes	Synechococcus sp. WH 8102 (Good annotation)		15	15
No Yes	Synechococcus sp. CC9311		15	15
No Yes	Synechococcus sp. WH 7803		15	15
No Yes	Synechococcus sp. PCC 7002		15	15
No Yes	Synechococcus elongatus PCC 7942		17	17
No Yes	Methanococcus maripaludis C6		14	14
No Yes	Methanococcus maripaludis C7		14	14
No Yes	Methanococcus maripaludis C5		14	14
No Yes	Sulfolobus islandicus Y.G.57.14		13	13
No Yes	Sulfolobus islandicus L.S.2.15		12	12
No Yes	Sulfolobus islandicus M.16.27		13	13
No Yes	Sulfolobus islandicus M.14.25		13	13
No Yes	Sulfolobus islandicus M.16.4		13	13
No Yes	Ailuropoda melanoleuca (Draft)	Giant panda	28	27
No Yes	Taeniopygia guttata (Early assembly)	Zebra finch	30	30
No Yes	Pediculus humanus corporis (Early assembly)	Human body louse	26	25
No Yes	Ixodes scapularis (Preliminary)	Black-legged tick	31	30
No Yes	Moniliophthora perniciosa FA553 (Genome survey)		18	18
No Yes	Lotus japonicus (Early assembly)		3	2
No Yes	Glycine max (Early assembly)	Soybean	115	111
No Yes	Manihot esculenta (Draft)	Cassava	52	50
No Yes	Ricinus communis (Early assembly)	Castor bean	40	38
No Yes	Phoenix dactylifera (Early draft)	Date palm	16	16
No Yes	Brachypodium distachyon (Early draft)		61	58
No Yes	Trypanosoma congolense (Partial)		19	17
No Yes	Toxoplasma gondii GT1 (Early assembly)		24	23
No Yes	Toxoplasma gondii VEG (Early assembly)		22	21
No Yes	Toxoplasma gondii RH (Archived)		23	22
No Yes	Homo sapiens 49_36k (longest transcript per gene)	Human	33	32
No Yes	Pan troglodytes 49_21h (longest transcript per gene)	Chimpanzee	28	27
No Yes	Gorilla gorilla 52_1 (longest transcript per gene)	Western lowland gorilla	28	27
No Yes	Pongo pygmaeus 49_1 (longest transcript per gene)	Bornean orangutan	30	29
No Yes	Macaca mulatta 49_10h (longest transcript per gene)	Rhesus monkey	30	29
No Yes	Callithrix jacchus 56_3 (longest transcript per gene)	White-tufted-ear marmoset	30	29
No Yes	Otolemur garnettii 49_1c (longest transcript per gene)	Small-eared galago	25	25
No Yes	Microcebus murinus 49_1 (longest transcript per gene)	Gray mouse lemur	29	28
No Yes	Tarsius syrichta 51_1 (longest transcript per gene)	Philippine tarsier	23	23
No Yes	Rattus norvegicus 49_34s (longest transcript per gene)	Norway rat	29	28
No Yes	Mus musculus 49_37b (longest transcript per gene)	House mouse	30	29
No Yes	Spermophilus tridecemlineatus 49_1e (longest transcript per gene)	Thirteen-lined ground squirrel	26	26
No Yes	Dipodomys ordii 51_1 (longest transcript per gene)	Ord's kangaroo rat	28	27
No Yes	Cavia porcellus 51_3 (longest transcript per gene)	Domestic guinea pig	30	29
No Yes	Oryctolagus cuniculus 49_1f (longest transcript per gene)	Rabbit	23	23
No Yes	Ochotona princeps 49_1 (longest transcript per gene)	American pika	26	26
No Yes	Tupaia belangeri 49_1d (longest transcript per gene)	Northern tree shrew	26	25
No Yes	Sus scrofa 56_9 (longest transcript per gene)	Pig	26	26
No Yes	Bos taurus 49_3f (longest transcript per gene)	Cattle	31	30
No Yes	Vicugna pacos 51_1 (longest transcript per gene)	Alpaca	23	23
No Yes	Tursiops truncatus 51_1 (longest transcript per gene)	Bottlenosed dolphin	30	29
No Yes	Canis familiaris 49_2g (longest transcript per gene)	Dog	30	29
No Yes	Felis catus 49_1c (longest transcript per gene)	Domestic cat	23	23
No Yes	Equus caballus 49_2 (longest transcript per gene)	Horse	31	30
No Yes	Myotis lucifugus 49_1e (longest transcript per gene)	Little brown bat	25	25
No Yes	Pteropus vampyrus 51_1 (longest transcript per gene)	Large flying fox	30	29
No Yes	Sorex araneus 49_1c (longest transcript per gene)	European shrew	20	19
No Yes	Erinaceus europaeus 49_1c (longest transcript per gene)	Western European hedgehog	26	25
No Yes	Procavia capensis 51_1 (longest transcript per gene)	Cape rock hyrax	28	27
No Yes	Loxodonta africana 49_1d (longest transcript per gene)	African savanna elephant	26	26
No Yes	Echinops telfairi 49_1e (longest transcript per gene)	Small Madagascar hedgehog	28	28
No Yes	Dasypus novemcinctus 49_1f (longest transcript per gene)	Nine-banded armadillo	23	23
No Yes	Macropus eugenii 55_1 (longest transcript per gene)	Tammar wallaby	28	27
No Yes	Monodelphis domestica 49_5d (longest transcript per gene)	Gray short-tailed opossum	31	30
No Yes	Ornithorhynchus anatinus 49_1f (longest transcript per gene)	Platypus	29	28
No Yes	Anolis carolinensis 55_1a (longest transcript per gene)	Green anole	30	29
No Yes	Gallus gallus 49_2g (longest transcript per gene)	Chicken	25	24
No Yes	Xenopus tropicalis 49_41i (longest transcript per gene)	Western clawed frog	30	29
No Yes	Danio rerio 49_7c (longest transcript per gene)	Zebrafish	29	28
No Yes	Gasterosteus aculeatus 49_1f (longest transcript per gene)	Three-spined stickleback	32	30
No Yes	Oryzias latipes 49_1e (longest transcript per gene)	Japanese medaka	32	30
No Yes	Tetraodon nigroviridis 49_1k (longest transcript per gene)	Spotted green pufferfish	36	34
No Yes	Takifugu rubripes 49_4i (longest transcript per gene)		31	29
No Yes	Ciona savignyi 49_2f (longest transcript per gene)		25	24
No Yes	Ciona intestinalis 49_2i (longest transcript per gene)		25	24
No Yes	Apis mellifera 37.2d (longest transcript per gene) (Not maintained)	Honey bee	26	26
No Yes	Drosophila melanogaster FlyBase 5.12 (longest transcript per gene) (FlyBase)	Fruit fly	44	41
No Yes	Drosophila melanogaster Ensembl 49_54 (longest transcript per gene)	Fruit fly	26	25
No Yes	Aedes aegypti 49_1b (longest transcript per gene)	Yellow fever mosquito	28	27
No Yes	Anopheles gambiae 49_3j (longest transcript per gene)		24	23
No Yes	Caenorhabditis elegans WormBase WS194 (longest transcript per gene) (WormBase)	Nematode	30	27
No Yes	Caenorhabditis elegans Ensembl 49_180a (longest transcript per gene)	Nematode	31	28
No Yes	Arabidopsis thaliana 9 (longest transcript per gene)	Thale cress	36	35
No Yes	Oryza sativa ssp. japonica 5.0 (Not transposons)	Japanese rice	86	81
No Yes	NCBI viral sequences (Viral)		19	19
No Yes	PDB chains (SCOP 1.73) (PDB)		78	78
No Yes	TargetDB (Targets)		642	629
No Yes	UniProt 15.0 (UniProt)		24259	24091
No Yes	UniProt 15.0 viral sequences (Viral)		18	18