P-loop containing nucleoside triphosphate hydrolases superfamily domain assignments
in
Saccharomyces cerevisiae SGD

Select to display	Genome		Domains	Proteins
No Yes	ALL		966795	966795
No Yes	Homo sapiens 49_36k (all transcripts)	Human	2112	1804
No Yes	Pan troglodytes 49_21h (all transcripts)	Chimpanzee	1536	1295
No Yes	Gorilla gorilla 52_1 (all transcripts)	Western Gorilla	807	693
No Yes	Pongo pygmaeus 49_1 (all transcripts)	Bornean orangutan	1116	942
No Yes	Macaca mulatta 49_10h (all transcripts)	Rhesus monkey	1690	1459
No Yes	Callithrix jacchus 56_3 (all transcripts)	White-tufted-ear marmoset	2053	1735
No Yes	Otolemur garnettii 49_1c (all transcripts)	Small-eared galago	778	660
No Yes	Microcebus murinus 49_1 (all transcripts)	Gray mouse lemur	825	701
No Yes	Tarsius syrichta 51_1 (all transcripts)	Philippine tarsier	739	610
No Yes	Rattus norvegicus 49_34s (all transcripts)	Norway rat	1507	1267
No Yes	Mus musculus 49_37b (all transcripts)	House mouse	1727	1470
No Yes	Spermophilus tridecemlineatus 49_1e (all transcripts)	Thirteen-lined ground squirrel	737	628
No Yes	Dipodomys ordii 51_1 (all transcripts)	Ord's kangaroo rat	851	716
No Yes	Cavia porcellus 51_3 (all transcripts)	Domestic guinea pig	985	830
No Yes	Oryctolagus cuniculus 49_1f (all transcripts)	Rabbit	734	625
No Yes	Ochotona princeps 49_1 (all transcripts)	American pika	838	704
No Yes	Tupaia belangeri 49_1d (all transcripts)	Northern tree shrew	742	634
No Yes	Sus scrofa 56_9 (all transcripts)	Pig	853	725
No Yes	Bos taurus 49_3f (all transcripts)	Cattle	1403	1160
No Yes	Vicugna pacos 51_1 (all transcripts)	Alpaca	629	521
No Yes	Tursiops truncatus 51_1 (all transcripts)	Bottlenosed dolphin	883	738
No Yes	Canis familiaris 49_2g (all transcripts)	Dog	1219	1040
No Yes	Felis catus 49_1c (all transcripts)	Domestic cat	715	619
No Yes	Equus caballus 49_2 (all transcripts)	Horse	1153	953
No Yes	Myotis lucifugus 49_1e (all transcripts)	Little brown bat	824	690
No Yes	Pteropus vampyrus 51_1 (all transcripts)	Large flying fox	900	749
No Yes	Sorex araneus 49_1c (all transcripts)	European shrew	684	575
No Yes	Erinaceus europaeus 49_1c (all transcripts)	Western European hedgehog	766	640
No Yes	Procavia capensis 51_1 (all transcripts)	Cape rock hyrax	839	708
No Yes	Loxodonta africana 49_1d (all transcripts)	African savanna elephant	735	625
No Yes	Echinops telfairi 49_1e (all transcripts)	Small Madagascar hedgehog	801	673
No Yes	Dasypus novemcinctus 49_1f (all transcripts)	Nine-banded armadillo	705	590
No Yes	Macropus eugenii 55_1 (all transcripts)	Tammar wallaby	821	703
No Yes	Monodelphis domestica 49_5d (all transcripts)	Gray short-tailed opossum	1707	1388
No Yes	Ornithorhynchus anatinus 49_1f (all transcripts)	Platypus	1272	1092
No Yes	Anolis carolinensis 55_1a (all transcripts)	Green anole	934	808
No Yes	Taeniopygia guttata 57_1c (all transcripts)	Zebra finch	925	791
No Yes	Meleagris gallopavo 57_2 (all transcripts)	Turkey	903	773
No Yes	Gallus gallus 49_2g (all transcripts)	Chicken	1138	968
No Yes	Xenopus laevis	African clawed frog	1665	1522
No Yes	Xenopus tropicalis 49_41i (all transcripts)	Western clawed frog	1469	1237
No Yes	Danio rerio 49_7c (all transcripts)	Zebrafish	1885	1601
No Yes	Gasterosteus aculeatus 49_1f (all transcripts)	Three-spined stickleback	1535	1343
No Yes	Oryzias latipes 49_1e (all transcripts)	Japanese medaka	1295	1120
No Yes	Tetraodon nigroviridis 49_1k (all transcripts)	Spotted green pufferfish	1245	1095
No Yes	Takifugu rubripes 49_4i (all transcripts)	Torafugu	2933	2441
No Yes	Branchiostoma floridae 1.0	Florida lancelet	2182	1890
No Yes	Ciona savignyi 49_2f (all transcripts)		1539	1193
No Yes	Ciona intestinalis 49_2i (all transcripts)		1167	972
No Yes	Strongylocentrotus purpuratus	Purple sea urchin	2235	1944
No Yes	Helobdella robusta		697	585
No Yes	Capitella sp. I		1260	1111
No Yes	Bombyx mori	Domestic silkworm	608	551
No Yes	Nasonia vitripennis	Jewel wasp	568	446
No Yes	Apis mellifera 37.2d (all transcripts) (Not maintained)	Honey bee	1804	1428
No Yes	Drosophila grimshawi 1.3		639	523
No Yes	Drosophila willistoni 1.3		621	506
No Yes	Drosophila pseudoobscura 2.3		632	514
No Yes	Drosophila persimilis 1.3		640	536
No Yes	Drosophila yakuba 1.3		641	513
No Yes	Drosophila simulans 1.3		571	478
No Yes	Drosophila sechellia 1.3		611	510
No Yes	Drosophila melanogaster Ensembl 49_54 (all transcripts)	Fruit fly	1045	869
No Yes	Drosophila erecta 1.3		607	490
No Yes	Drosophila ananassae 1.3		610	494
No Yes	Drosophila virilis 1.2		611	503
No Yes	Drosophila mojavensis 1.3		608	494
No Yes	Aedes aegypti 49_1b (all transcripts)	Yellow fever mosquito	719	578
No Yes	Culex pipiens quinquefasciatus	Southern house mosquito	761	622
No Yes	Anopheles gambiae 49_3j (all transcripts)	African malaria mosquito	611	501
No Yes	Tribolium castaneum 3.0	Red flour beetle	691	551
No Yes	Pediculus humanus corporis (Early assembly)	Human body louse	571	469
No Yes	Acyrthosiphon pisum	Pea aphid	675	538
No Yes	Daphnia pulex	Common water flea	996	862
No Yes	Ixodes scapularis (Preliminary)	Black-legged tick	767	665
No Yes	Lottia gigantea		857	738
No Yes	Pristionchus pacificus		757	660
No Yes	Meloidogyne incognita	Southern root-knot nematode	667	572
No Yes	Meloidogyne hapla		477	392
No Yes	Brugia malayi	Agent of lymphatic filariasis	319	263
No Yes	Caenorhabditis japonica		676	566
No Yes	Caenorhabditis brenneri		521	435
No Yes	Caenorhabditis remanei		875	705
No Yes	Caenorhabditis elegans Ensembl 49_180a (all transcripts)	Nematode	938	784
No Yes	Caenorhabditis briggsae 2		652	525
No Yes	Schistosoma mansoni		626	522
No Yes	Nematostella vectensis 1.0	Starlet sea anemone	1082	941
No Yes	Hydra magnipapillata		1073	877
No Yes	Trichoplax adhaerens		688	579
No Yes	Proterospongia sp. ATCC 50818		780	647
No Yes	Monosiga brevicollis		719	587
No Yes	Capsaspora owczarzaki ATCC 30864		587	473
No Yes	Malassezia globosa CBS 7966		346	274
No Yes	Ustilago maydis		412	313
No Yes	Puccinia graminis f. sp. tritici CRL 75-36-700-3		755	589
No Yes	Melampsora laricis-populina		493	400
No Yes	Sporobolomyces roseus IAM 13481		399	315
No Yes	Serpula lacrymans var. lacrymans S7.9		503	404
No Yes	Coprinopsis cinerea okayama7 130		630	494
No Yes	Pleurotus ostreatus	Oyster mushroom	551	437
No Yes	Laccaria bicolor S238N-H82		958	809
No Yes	Agaricus bisporus var. bisporus		575	473
No Yes	Schizophyllum commune		512	401
No Yes	Heterobasidion annosum		486	386
No Yes	Phanerochaete chrysosporium RP-78 2.1		500	394
No Yes	Postia placenta		899	721
No Yes	Tremella mesenterica		422	324
No Yes	Cryptococcus neoformans JEC21		390	297
No Yes	Magnaporthe grisea 70-15		530	407
No Yes	Podospora anserina		518	405
No Yes	Sporotrichum thermophile ATCC 42464		470	357
No Yes	Thielavia terrestris NRRL 8126		469	357
No Yes	Chaetomium globosum CBS 148.51		654	511
No Yes	Neurospora tetrasperma		467	360
No Yes	Neurospora discreta FGSC 8579		456	347
No Yes	Neurospora crassa OR74A		484	370
No Yes	Cryphonectria parasitica	Chestnut blight fungus	527	409
No Yes	Fusarium oxysporum f. sp. lycopersici 4286		726	555
No Yes	Nectria haematococca mpVI		678	511
No Yes	Fusarium verticillioides 7600		588	459
No Yes	Fusarium graminearum		600	458
No Yes	Trichoderma atroviride		560	430
No Yes	Trichoderma reesei 1.2		507	386
No Yes	Trichoderma virens Gv29-8		601	464
No Yes	Verticillium dahliae VdLs.17		488	366
No Yes	Verticillium albo-atrum VaMs.102		457	359
No Yes	Botrytis cinerea B05.10		509	397
No Yes	Sclerotinia sclerotiorum		514	389
No Yes	Alternaria brassicicola		453	353
No Yes	Pyrenophora tritici-repentis		515	400
No Yes	Cochliobolus heterostrophus		495	378
No Yes	Stagonospora nodorum		553	431
No Yes	Mycosphaerella fijiensis CIRAD86		458	356
No Yes	Mycosphaerella graminicola IPO323		496	384
No Yes	Ajellomyces dermatitidis SLH14081		477	363
No Yes	Histoplasma capsulatum class NAmI strain WU24		454	365
No Yes	Microsporum gypseum		510	385
No Yes	Arthroderma benhamiae CBS 112371		450	348
No Yes	Microsporum canis CBS 113480		505	380
No Yes	Trichophyton equinum CBS 127.97		464	353
No Yes	Trichophyton verrucosum HKI 0517		461	347
No Yes	Trichophyton tonsurans CBS 112818		472	361
No Yes	Trichophyton rubrum CBS 118892		458	357
No Yes	Paracoccidioides brasiliensis Pb18		417	321
No Yes	Coccidioides posadasii RMSCC 3488		447	340
No Yes	Coccidioides immitis RS		450	347
No Yes	Uncinocarpus reesii 1704		438	345
No Yes	Aspergillus fumigatus Af293		517	386
No Yes	Neosartorya fischeri NRRL 181		563	421
No Yes	Penicillium chrysogenum Wisconsin 54-1255		524	401
No Yes	Penicillium marneffei ATCC 18224		576	443
No Yes	Aspergillus carbonarius ITEM 5010		536	394
No Yes	Aspergillus terreus NIH2624		553	414
No Yes	Aspergillus oryzae RIB40		575	440
No Yes	Aspergillus niger ATCC 1015		396	284
No Yes	Aspergillus flavus NRRL3357		589	436
No Yes	Aspergillus clavatus NRRL 1		499	375
No Yes	Aspergillus nidulans FGSC A4		508	383
No Yes	Tuber melanosporum Vittad	Perigord truffle	561	460
No Yes	Candida dubliniensis CD36		376	289
No Yes	Candida tropicalis MYA-3404		396	304
No Yes	Candida parapsilosis		396	302
No Yes	Candida albicans SC5314		381	297
No Yes	Yarrowia lipolytica CLIB122		427	315
No Yes	Candida lusitaniae ATCC 42720		371	295
No Yes	Vanderwaltozyma polyspora DSM 70294		384	300
No Yes	Candida glabrata CBS138		386	297
No Yes	Kluyveromyces thermotolerans CBS 6340		366	287
No Yes	Lachancea kluyveri		398	300
No Yes	Kluyveromyces waltii		370	297
No Yes	Lodderomyces elongisporus NRRL YB-4239		377	290
No Yes	Ashbya gossypii ATCC 10895		353	280
No Yes	Debaromyces hansenii		392	295
No Yes	Zygosaccharomyces rouxii		377	294
No Yes	Saccharomyces mikatae MIT		412	330
No Yes	Saccharomyces paradoxus MIT		406	321
No Yes	Saccharomyces cerevisiae SGD (SGD)	Baker's yeast	430	327
No Yes	Saccharomyces bayanus MIT		407	330
No Yes	Candida guilliermondii ATCC 6260		654	511
No Yes	Pichia stipitis CBS 6054		389	298
No Yes	Pichia pastoris GS115		380	285
No Yes	Kluyveromyces lactis		368	289
No Yes	Schizosaccharomyces octosporus yFS286		376	290
No Yes	Schizosaccharomyces japonicus yFS275		376	293
No Yes	Schizosaccharomyces pombe	Fission yeast	377	290
No Yes	Allomyces macrogynus ATCC 38327		1193	937
No Yes	Rhizopus oryzae RA 99-880		724	586
No Yes	Phycomyces blakesleeanus		622	494
No Yes	Mucor circinelloides		641	514
No Yes	Encephalitozoon intestinalis		185	154
No Yes	Encephalitozoon cuniculi		183	151
No Yes	Spizellomyces punctatus DAOM BR117		587	460
No Yes	Batrachochytrium dendrobatidis JEL423		515	410
No Yes	Dictyostelium discoideum		756	605
No Yes	Dictyostelium purpureum		684	544
No Yes	Entamoeba dispar		692	599
No Yes	Entamoeba invadens		711	632
No Yes	Entamoeba histolytica 1		662	569
No Yes	Arabidopsis lyrata	Lyrate rockcress	1401	1149
No Yes	Arabidopsis thaliana 9 (all transcripts)	Thale cress	1608	1322
No Yes	Carica papaya	Papaya	909	780
No Yes	Medicago truncatula	Barrel medic	1893	1658
No Yes	Glycine max	Soybean	2468	2049
No Yes	Cucumis sativus	Cucumber	1756	1425
No Yes	Populus trichocarpa 1.1	Black cottonwood	2225	1944
No Yes	Vitis vinifera	Wine grape	1776	1529
No Yes	Brachypodium distachyon		1664	1361
No Yes	Oryza sativa ssp. japonica 5.0	Japanese rice	2156	1852
No Yes	Zea mays subsp. mays	Maize	2009	1759
No Yes	Sorghum bicolor	Sorghum	1591	1303
No Yes	Selaginella moellendorffii		1903	1494
No Yes	Physcomitrella patens subsp. patens		1180	955
No Yes	Coccomyxa sp. C-169		572	464
No Yes	Chlorella sp. NC64A		616	510
No Yes	Chlorella vulgaris		574	471
No Yes	Volvox carteri f. nagariensis		746	607
No Yes	Chlamydomonas reinhardtii 4.0		710	580
No Yes	Ostreococcus sp. RCC809		511	421
No Yes	Ostreococcus lucimarinus CCE9901		563	458
No Yes	Ostreococcus tauri		532	439
No Yes	Micromonas sp. RCC299		643	524
No Yes	Micromonas pusilla CCMP1545		627	520
No Yes	Cyanidioschyzon merolae		391	317
No Yes	Giardia lamblia		294	235
No Yes	Trypanosoma cruzi strain CL Brener		979	824
No Yes	Trypanosoma brucei		511	416
No Yes	Leishmania mexicana		561	449
No Yes	Leishmania major strain Friedlin		559	455
No Yes	Leishmania infantum JPCM5		574	460
No Yes	Leishmania braziliensis MHOM/BR/75/M2904		551	444
No Yes	Aureococcus anophagefferens		965	832
No Yes	Phytophthora ramorum 1.1	Sudden oak death agent	960	727
No Yes	Phytophthora sojae 1.1		942	723
No Yes	Phytophthora infestans T30-4		1364	1061
No Yes	Phytophthora capsici		948	770
No Yes	Phaeodactylum tricornutum		615	504
No Yes	Fragilariopsis cylindrus		1127	937
No Yes	Thalassiosira pseudonana		681	571
No Yes	Paramecium tetraurelia		1492	1276
No Yes	Tetrahymena thermophila SB210 1		1030	808
No Yes	Babesia bovis T2Bo		300	237
No Yes	Theileria parva		302	233
No Yes	Theileria annulata		306	233
No Yes	Plasmodium falciparum 3D7		357	278
No Yes	Plasmodium vivax SaI-1		364	284
No Yes	Plasmodium knowlesi strain H		356	278
No Yes	Plasmodium yoelii ssp. yoelii 1		367	302
No Yes	Plasmodium chabaudi		432	392
No Yes	Plasmodium berghei ANKA		425	370
No Yes	Cryptosporidium hominis		234	188
No Yes	Cryptosporidium muris		298	228
No Yes	Cryptosporidium parvum Iowa II		290	222
No Yes	Neospora caninum Nc-Liverpool		435	343
No Yes	Neospora caninum		423	324
No Yes	Toxoplasma gondii ME49		448	349
No Yes	Naegleria gruberi		947	850
No Yes	Trichomonas vaginalis		3044	2939
No Yes	Guillardia theta		61	50
No Yes	Emiliania huxleyi CCMP1516		1728	1477
No Yes	Candidatus Phytoplasma mali		73	64
No Yes	Aster yellows witches-broom phytoplasma AYWB		89	80
No Yes	Onion yellows phytoplasma OY-M		121	111
No Yes	Acholeplasma laidlawii PG-8A		149	129
No Yes	Mesoplasma florum L1		84	74
No Yes	Ureaplasma parvum ser. 3 ATCC 700970		67	63
No Yes	Ureaplasma urealyticum ser. 10 ATCC 33699		72	67
No Yes	Mycoplasma mycoides ssp. mycoides SC PG1		96	85
No Yes	Mycoplasma capricolum ssp. capricolum ATCC 27343		90	81
No Yes	Mycoplasma crocodyli MP145		77	72
No Yes	Mycoplasma conjunctivae		80	72
No Yes	Mycoplasma penetrans HF-2		108	100
No Yes	Mycoplasma mobile 163K		84	71
No Yes	Mycoplasma arthritidis 158L3-1		76	68
No Yes	Mycoplasma agalactiae PG2		84	74
No Yes	Mycoplasma synoviae 53		77	70
No Yes	Mycoplasma pulmonis UAB CTIP		92	84
No Yes	Mycoplasma pneumoniae M129		74	65
No Yes	Mycoplasma hyopneumoniae 232		93	81
No Yes	Mycoplasma hominis		73	64
No Yes	Mycoplasma genitalium G37		68	60
No Yes	Mycoplasma gallisepticum R		84	76
No Yes	Aminobacterium colombiense DSM 12261		155	137
No Yes	Thermanaerovibrio acidaminovorans DSM 6589		150	131
No Yes	Brachyspira hyodysenteriae WA1		156	139
No Yes	Leptospira borgpetersenii ser. Hardjo-bovis L550		163	141
No Yes	Leptospira interrogans ser. Lai 56601		169	147
No Yes	Leptospira biflexa ser. Patoc Patoc 1 (Paris)		172	149
No Yes	Treponema pallidum ssp. pallidum Nichols		101	86
No Yes	Treponema denticola ATCC 35405		265	232
No Yes	Borrelia garinii PBi		94	80
No Yes	Borrelia afzelii PKo		94	80
No Yes	Borrelia burgdorferi B31		97	80
No Yes	Borrelia recurrentis A1		94	80
No Yes	Borrelia duttonii Ly		99	84
No Yes	Borrelia turicatae 91E135		101	84
No Yes	Borrelia hermsii DAH		100	85
No Yes	Rhodopirellula baltica SH 1		298	256
No Yes	Pirellula staleyi DSM 6068		259	225
No Yes	Gardnerella vaginalis 409-05		145	116
No Yes	Bifidobacterium longum NCC2705		168	138
No Yes	Bifidobacterium animalis ssp. lactis AD011		161	136
No Yes	Bifidobacterium dentium Bd1		201	163
No Yes	Bifidobacterium adolescentis ATCC 15703		170	140
No Yes	Kineococcus radiotolerans SRS30216		284	235
No Yes	Catenulispora acidiphila DSM 44928		534	469
No Yes	Stackebrandtia nassauensis DSM 44728		430	382
No Yes	Acidothermus cellulolyticus 11B		162	142
No Yes	Nakamurella multipartita DSM 44233		346	303
No Yes	Geodermatophilus obscurus DSM 43160		291	249
No Yes	Frankia sp. CcI3		293	260
No Yes	Frankia alni ACN14a		402	352
No Yes	Thermobifida fusca YX		240	209
No Yes	Thermomonospora curvata DSM 43183		338	295
No Yes	Streptosporangium roseum DSM 43021		540	481
No Yes	Streptomyces griseus ssp. griseus NBRC 13350		482	422
No Yes	Streptomyces avermitilis MA-4680		453	392
No Yes	Streptomyces scabiei 87.22		506	441
No Yes	Streptomyces coelicolor A3(2)		444	390
No Yes	Actinosynnema mirum DSM 43827		410	360
No Yes	Saccharomonospora viridis DSM 43017		271	224
No Yes	Saccharopolyspora erythraea NRRL 2338		383	330
No Yes	Kribbella flavida DSM 17836		444	390
No Yes	Nocardioides sp. JS614		330	283
No Yes	Propionibacterium acnes KPA171202		215	184
No Yes	Salinispora arenicola CNS-205		315	268
No Yes	Salinispora tropica CNB-440		304	262
No Yes	Gordonia bronchialis DSM 43247		288	240
No Yes	Rhodococcus jostii RHA1		348	302
No Yes	Rhodococcus opacus B4		351	305
No Yes	Rhodococcus erythropolis PR4		356	314
No Yes	Nocardia farcinica IFM 10152		318	274
No Yes	Mycobacterium abscessus		224	186
No Yes	Mycobacterium sp. MCS		289	244
No Yes	Mycobacterium avium ssp. paratuberculosis K-10		233	195
No Yes	Mycobacterium vanbaalenii PYR-1		312	266
No Yes	Mycobacterium tuberculosis H37Rv		221	185
No Yes	Mycobacterium bovis AF2122/97		220	183
No Yes	Mycobacterium ulcerans Agy99		184	154
No Yes	Mycobacterium gilvum PYR-GCK		286	240
No Yes	Mycobacterium marinum M		257	217
No Yes	Mycobacterium smegmatis MC2 155		343	290
No Yes	Mycobacterium leprae TN		120	98
No Yes	Corynebacterium aurimucosum		203	170
No Yes	Corynebacterium kroppenstedtii DSM 44385		183	152
No Yes	Corynebacterium efficiens YS-314		228	186
No Yes	Corynebacterium urealyticum DSM 7109		182	149
No Yes	Corynebacterium jeikeium K411		183	150
No Yes	Corynebacterium glutamicum ATCC 13032 Kitasato		249	201
No Yes	Corynebacterium diphtheriae NCTC 13129		203	167
No Yes	Tropheryma whipplei Twist		91	76
No Yes	Sanguibacter keddieii DSM 10542		311	255
No Yes	Kytococcus sedentarius DSM 20547		213	182
No Yes	Beutenbergia cavernae DSM 12333		299	260
No Yes	Leifsonia xyli ssp. xyli CTCB07		166	137
No Yes	Clavibacter michiganensis ssp. michiganensis NCPPB 382		229	190
No Yes	Jonesia denitrificans DSM 20603		232	196
No Yes	Brachybacterium faecium DSM 4810		249	204
No Yes	Xylanimonas cellulosilytica DSM 15894		308	258
No Yes	Kocuria rhizophila DC2201		174	146
No Yes	Rothia mucilaginosa DY-18		160	135
No Yes	Arthrobacter sp. FB24		280	225
No Yes	Arthrobacter chlorophenolicus A6		266	222
No Yes	Arthrobacter aurescens TC1		266	223
No Yes	Renibacterium salmoninarum ATCC 33209		213	186
No Yes	Micrococcus luteus NCTC 2665		179	153
No Yes	Cryptobacterium curtum DSM 15641		131	109
No Yes	Eggerthella lenta DSM 2243		262	223
No Yes	Slackia heliotrinireducens DSM 20476		214	186
No Yes	Atopobium parvulum DSM 20469		152	128
No Yes	Conexibacter woesei DSM 14684		424	368
No Yes	Rubrobacter xylanophilus DSM 9941		201	176
No Yes	Acidimicrobium ferrooxidans DSM 10331		140	123
No Yes	Denitrovibrio acetiphilus DSM 12809		241	218
No Yes	Deferribacter desulfuricans SSM1		187	165
No Yes	Kosmotoga olearia TBF 19.5.1		201	178
No Yes	Petrotoga mobilis SJ95		196	173
No Yes	Fervidobacterium nodosum Rt17-B1		171	148
No Yes	Thermosipho melanesiensis BI429		173	153
No Yes	Thermosipho africanus TCF52B		175	153
No Yes	Thermotoga lettingae TMO		213	183
No Yes	Thermotoga sp. RQ2		179	161
No Yes	Thermotoga naphthophila RKU-10		179	157
No Yes	Thermotoga petrophila RKU-1		175	156
No Yes	Thermotoga neapolitana DSM 4359		185	163
No Yes	Thermotoga maritima MSB8		177	159
No Yes	Dehalococcoides sp. CBDB1		118	101
No Yes	Dehalococcoides ethenogenes 195		124	106
No Yes	Thermomicrobium roseum DSM 5159		123	109
No Yes	Sphaerobacter thermophilus DSM 20745		246	213
No Yes	Herpetosiphon aurantiacus ATCC 23779		346	308
No Yes	Roseiflexus sp. RS-1		328	287
No Yes	Roseiflexus castenholzii DSM 13941		301	264
No Yes	Chloroflexus sp. Y-400-fl		289	252
No Yes	Chloroflexus aggregans DSM 9485		279	242
No Yes	Chloroflexus aurantiacus J-10-fl		290	252
No Yes	Sulfurihydrogenibium sp. YO3AOP1		124	106
No Yes	Sulfurihydrogenibium azorense Az-Fu1		119	104
No Yes	Persephonella marina EX-H1		155	138
No Yes	Hydrogenobaculum sp. Y04AAS1		106	97
No Yes	Thermocrinis albus DSM 14484		124	114
No Yes	Aquifex aeolicus VF5		129	115
No Yes	Hydrogenobacter thermophilus TK-6		135	124
No Yes	Gemmatimonas aurantiaca T-27		241	206
No Yes	Fibrobacter succinogenes ssp. succinogenes S85		222	183
No Yes	Candidatus Koribacter versatilis Ellin345		204	182
No Yes	Candidatus Solibacter usitatus Ellin6076		308	269
No Yes	Acidobacterium capsulatum ATCC 51196		193	173
No Yes	Elusimicrobium minutum Pei191		92	82
No Yes	uncultured Termite group 1 bacterium phylotype Rs-D17		83	70
No Yes	Pelodictyon phaeoclathratiforme BU-1		245	212
No Yes	Pelodictyon luteolum DSM 273		192	169
No Yes	Chlorobium chlorochromatii CaD3		181	158
No Yes	Chlorobium phaeobacteroides DSM 266		245	219
No Yes	Chlorobium phaeovibrioides DSM 265		168	145
No Yes	Chlorobium limicola DSM 245		198	178
No Yes	Chlorobaculum parvum NCIB 8327		171	150
No Yes	Chlorobium tepidum TLS		175	154
No Yes	Chloroherpeton thalassium ATCC 35110		199	177
No Yes	Prosthecochloris aestuarii DSM 271		185	163
No Yes	Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2		80	68
No Yes	Prevotella ruminicola 23		169	146
No Yes	Parabacteroides distasonis ATCC 8503		197	176
No Yes	Porphyromonas gingivalis W83		153	132
No Yes	Bacteroides vulgatus ATCC 8482		243	212
No Yes	Bacteroides thetaiotaomicron VPI-5482		230	202
No Yes	Bacteroides fragilis NCTC 9343		219	191
No Yes	Candidatus Amoebophilus asiaticus 5a2		122	104
No Yes	Salinibacter ruber DSM 13855		184	160
No Yes	Rhodothermus marinus DSM 4252		159	144
No Yes	Chitinophaga pinensis DSM 2588		284	242
No Yes	Dyadobacter fermentans DSM 18053		235	199
No Yes	Cytophaga hutchinsonii ATCC 33406		183	155
No Yes	Spirosoma linguale DSM 74		266	224
No Yes	Pedobacter heparinus DSM 2366		182	152
No Yes	Candidatus Sulcia muelleri GWSS		19	17
No Yes	Zunongwangia profunda SM-A87		205	175
No Yes	Gramella forsetii KT0803		160	136
No Yes	Robiginitalea biformata HTCC2501		166	144
No Yes	Flavobacteriaceae bacterium 3519-10		135	116
No Yes	Capnocytophaga ochracea DSM 7271		137	117
No Yes	Flavobacterium psychrophilum JIP02/86		159	138
No Yes	Flavobacterium johnsoniae UW101		210	183
No Yes	Blattabacterium sp. Bge		55	49
No Yes	Dictyoglomus turgidum DSM 6724		164	145
No Yes	Dictyoglomus thermophilum H-6-12		181	161
No Yes	Candidatus Protochlamydia amoebophila UWE25		136	111
No Yes	Chlamydophila pneumoniae TW-183		89	73
No Yes	Chlamydophila caviae GPIC		88	73
No Yes	Chlamydophila felis Fe/C-56		89	75
No Yes	Chlamydophila abortus S26/3		91	75
No Yes	Chlamydia muridarum Nigg		89	72
No Yes	Chlamydia trachomatis D/UW-3/CX		87	71
No Yes	Coraliomargarita akajimensis DSM 45221		196	170
No Yes	Opitutus terrae PB90-1		238	205
No Yes	Methylacidiphilum infernorum V4		126	109
No Yes	Akkermansia muciniphila ATCC BAA-835		150	131
No Yes	Thermodesulfovibrio yellowstonii DSM 11347		174	155
No Yes	Streptobacillus moniliformis DSM 12112		145	130
No Yes	Sebaldella termitidis ATCC 33386		194	164
No Yes	Leptotrichia buccalis DSM 1135		176	153
No Yes	Fusobacterium nucleatum ssp. nucleatum ATCC 25586		178	158
No Yes	Thermobaculum terrenum ATCC BAA-798		205	176
No Yes	Deinococcus deserti VCD115		186	164
No Yes	Deinococcus geothermalis DSM 11300		167	149
No Yes	Deinococcus radiodurans R1		197	176
No Yes	Meiothermus ruber DSM 1279		222	197
No Yes	Thermus thermophilus HB27 (First sequenced)		143	130
No Yes	Natranaerobius thermophilus JW/NM-WN-LF		218	199
No Yes	Symbiobacterium thermophilum IAM 14863		289	260
No Yes	Anaerococcus prevotii DSM 20548		184	161
No Yes	Finegoldia magna ATCC 29328		202	182
No Yes	Clostridiales genomosp. BVAB3 UPII9-5		180	155
No Yes	Anaerocellum thermophilum DSM 6725		215	189
No Yes	Candidatus Desulforudis audaxviator MP104C		176	156
No Yes	Pelotomaculum thermopropionicum SI		242	219
No Yes	Desulfitobacterium hafniense Y51		458	410
No Yes	Desulfotomaculum reducens MI-1		277	253
No Yes	Desulfotomaculum acetoxidans DSM 771		321	280
No Yes	Eubacterium rectale ATCC 33656		271	246
No Yes	Eubacterium eligens ATCC 27750		170	151
No Yes	Syntrophomonas wolfei ssp. wolfei Goettingen		225	200
No Yes	Heliobacterium modesticaldum Ice1		222	187
No Yes	Alkaliphilus oremlandii OhILAs		267	236
No Yes	Alkaliphilus metalliredigens QYMF		342	307
No Yes	Clostridium phytofermentans ISDg		344	295
No Yes	Clostridium novyi NT		208	180
No Yes	Clostridium kluyveri DSM 555		270	243
No Yes	Clostridium cellulolyticum H10		262	218
No Yes	Clostridium beijerinckii NCIMB 8052		334	291
No Yes	Clostridium thermocellum ATCC 27405		247	217
No Yes	Clostridium tetani E88		233	198
No Yes	Clostridium perfringens 13		211	181
No Yes	Clostridium difficile 630		302	270
No Yes	Clostridium botulinum A ATCC 3502		291	259
No Yes	Clostridium acetobutylicum ATCC 824		269	233
No Yes	Veillonella parvula DSM 2008		175	152
No Yes	Acidaminococcus fermentans DSM 20731		177	153
No Yes	Caldicellulosiruptor saccharolyticus DSM 8903		218	191
No Yes	Coprothermobacter proteolyticus DSM 5265		137	119
No Yes	Carboxydothermus hydrogenoformans Z-2901		183	163
No Yes	Moorella thermoacetica ATCC 39073		201	174
No Yes	Ammonifex degensii KC4		161	144
No Yes	Thermoanaerobacter pseudethanolicus ATCC 33223		202	182
No Yes	Thermoanaerobacter sp. X514		215	193
No Yes	Thermoanaerobacter tengcongensis MB4		217	199
No Yes	Thermoanaerobacter italicus Ab9		182	164
No Yes	Halothermothrix orenii H 168		199	174
No Yes	Enterococcus faecalis V583		240	210
No Yes	Oenococcus oeni PSU-1		158	136
No Yes	Leuconostoc citreum KM20		165	143
No Yes	Leuconostoc mesenteroides ssp. mesenteroides ATCC 8293		178	154
No Yes	Lactobacillus casei ATCC 334		222	194
No Yes	Lactobacillus crispatus ST1		198	168
No Yes	Lactobacillus rhamnosus GG		234	206
No Yes	Lactobacillus johnsonii NCC 533		195	167
No Yes	Lactobacillus salivarius UCC118		160	136
No Yes	Lactobacillus fermentum IFO 3956		156	132
No Yes	Lactobacillus sakei ssp. sakei 23K		167	144
No Yes	Lactobacillus reuteri DSM 20016		167	142
No Yes	Lactobacillus gasseri ATCC 33323		180	151
No Yes	Lactobacillus plantarum WCFS1		214	189
No Yes	Lactobacillus helveticus DPC 4571		169	144
No Yes	Lactobacillus delbrueckii ssp. bulgaricus ATCC 11842		177	150
No Yes	Lactobacillus brevis ATCC 367		172	145
No Yes	Lactobacillus acidophilus NCFM		188	162
No Yes	Pediococcus pentosaceus ATCC 25745		152	129
No Yes	Lactococcus lactis ssp. lactis Il1403		165	143
No Yes	Streptococcus gallolyticus UCN34		199	170
No Yes	Streptococcus equi ssp. zooepidemicus MGCS10565		178	156
No Yes	Streptococcus dysgalactiae ssp. equisimilis GGS_124		186	167
No Yes	Streptococcus mitis B6		199	173
No Yes	Streptococcus uberis 0140J		167	142
No Yes	Streptococcus pyogenes M1 GAS		162	141
No Yes	Streptococcus pneumoniae TIGR4 (Virulent)		190	160
No Yes	Streptococcus agalactiae NEM316		201	172
No Yes	Streptococcus mutans UA159		182	158
No Yes	Streptococcus thermophilus LMG 18311 (Older strain)		177	156
No Yes	Streptococcus suis 05ZYH33		204	180
No Yes	Streptococcus sanguinis SK36		201	176
No Yes	Streptococcus gordonii Challis subCH1		193	166
No Yes	Exiguobacterium sp. AT1b		234	197
No Yes	Exiguobacterium sibiricum 255-15		209	180
No Yes	Bacillus tusciae DSM 2912		232	202
No Yes	Alicyclobacillus acidocaldarius ssp. acidocaldarius DSM 446		211	183
No Yes	Brevibacillus brevis NBRC 100599		369	332
No Yes	Paenibacillus sp. JDR-2		362	315
No Yes	Listeria welshimeri ser. 6b SLCC5334		219	190
No Yes	Listeria innocua Clip11262		222	195
No Yes	Listeria seeligeri ser. 1/2b SLCC3954		214	185
No Yes	Listeria monocytogenes EGD-e		209	183
No Yes	Lysinibacillus sphaericus C3-41		283	250
No Yes	Oceanobacillus iheyensis HTE831		237	210
No Yes	Anoxybacillus flavithermus WK1		211	182
No Yes	Geobacillus sp. WCH70		227	191
No Yes	Geobacillus thermodenitrificans NG80-2		236	200
No Yes	Geobacillus kaustophilus HTA426		229	197
No Yes	Bacillus subtilis ssp. subtilis 168		236	205
No Yes	Bacillus licheniformis ATCC 14580		245	216
No Yes	Bacillus amyloliquefaciens FZB42		227	194
No Yes	Bacillus halodurans C-125		266	236
No Yes	Bacillus weihenstephanensis KBAB4		309	267
No Yes	Bacillus thuringiensis ser. konkukian 97-27		314	274
No Yes	Bacillus cereus ATCC 14579		282	247
No Yes	Bacillus anthracis Ames Ancestor		295	255
No Yes	Bacillus pseudofirmus OF4		258	220
No Yes	Bacillus clausii KSM-K16		279	242
No Yes	Bacillus pumilus SAFR-032		228	198
No Yes	Bacillus megaterium QM B1551		270	232
No Yes	Macrococcus caseolyticus JCSC5402		172	150
No Yes	Staphylococcus saprophyticus ssp. saprophyticus ATCC 15305		176	152
No Yes	Staphylococcus lugdunensis HKU09-01		197	169
No Yes	Staphylococcus haemolyticus JCSC1435		184	156
No Yes	Staphylococcus epidermidis RP62A		174	149
No Yes	Staphylococcus carnosus ssp. carnosus TM300		180	154
No Yes	Staphylococcus aureus ssp. aureus NCTC 8325		189	163
No Yes	Nautilia profundicola AmH		122	110
No Yes	Sulfurospirillum deleyianum DSM 6946		170	150
No Yes	Arcobacter butzleri RM4018		155	137
No Yes	Campylobacter hominis ATCC BAA-381		121	103
No Yes	Campylobacter lari RM2100		115	103
No Yes	Campylobacter curvus 525.92		119	103
No Yes	Campylobacter concisus 13826		122	107
No Yes	Campylobacter jejuni ssp. jejuni NCTC 11168		119	107
No Yes	Campylobacter fetus ssp. fetus 82-40		130	114
No Yes	Sulfurimonas denitrificans DSM 1251		147	126
No Yes	Wolinella succinogenes DSM 1740		145	131
No Yes	Helicobacter hepaticus ATCC 51449		122	106
No Yes	Helicobacter mustelae 12198		108	93
No Yes	Helicobacter acinonychis Sheeba		118	105
No Yes	Helicobacter pylori 26695		129	114
No Yes	Nitratiruptor sp. SB155-2		140	119
No Yes	Sulfurovum sp. NBC37-1		162	140
No Yes	Bdellovibrio bacteriovorus HD100		203	175
No Yes	Syntrophus aciditrophicus SB		257	222
No Yes	Syntrophobacter fumaroxidans MPOB		320	286
No Yes	Desulfotalea psychrophila LSv54		235	203
No Yes	Desulfatibacillum alkenivorans AK-01		349	314
No Yes	Desulfobacterium autotrophicum HRM2		431	380
No Yes	Desulfococcus oleovorans Hxd3		247	218
No Yes	Desulfohalobium retbaense DSM 5692		224	199
No Yes	Desulfomicrobium baculatum DSM 4028		304	264
No Yes	Lawsonia intracellularis PHE/MN1-00		123	106
No Yes	Desulfovibrio magneticus RS-1		302	273
No Yes	Desulfovibrio vulgaris Hildenborough		227	203
No Yes	Desulfovibrio salexigens DSM 2638		274	243
No Yes	Desulfovibrio desulfuricans ssp. desulfuricans G20		265	234
No Yes	Pelobacter propionicus DSM 2379		309	272
No Yes	Pelobacter carbinolicus DSM 2380		258	229
No Yes	Geobacter uraniireducens Rf4		322	285
No Yes	Geobacter sp. FRC-32		271	240
No Yes	Geobacter lovleyi SZ		286	255
No Yes	Geobacter bemidjiensis Bem		268	238
No Yes	Geobacter sulfurreducens PCA		256	226
No Yes	Geobacter metallireducens GS-15		261	232
No Yes	Haliangium ochraceum DSM 14365		465	409
No Yes	Sorangium cellulosum So ce 56		630	558
No Yes	Anaeromyxobacter sp. Fw109-5		300	265
No Yes	Anaeromyxobacter dehalogenans 2CP-C		287	260
No Yes	Myxococcus xanthus DK 1622		433	373
No Yes	Magnetococcus sp. MC-1		268	236
No Yes	Sideroxydans lithotrophicus ES-1		191	166
No Yes	Aromatoleum aromaticum EbN1		309	271
No Yes	Dechloromonas aromatica RCB		262	231
No Yes	Thauera sp. MZ1T		321	281
No Yes	Laribacter hongkongensis HLHK9		198	169
No Yes	Chromobacterium violaceum ATCC 12472		237	208
No Yes	Neisseria meningitidis Z2491		134	119
No Yes	Neisseria gonorrhoeae FA 1090		137	118
No Yes	Methylotenera mobilis JLW8		172	152
No Yes	Methylovorus sp. SIP3-4		192	169
No Yes	Methylobacillus flagellatus KT		216	189
No Yes	Thiobacillus denitrificans ATCC 25259		206	185
No Yes	Candidatus Accumulibacter phosphatis clade IIA UW-1		345	308
No Yes	Methylibium petroleiphilum PM1		263	231
No Yes	Leptothrix cholodnii SP-6		319	278
No Yes	Ralstonia eutropha JMP134		316	279
No Yes	Cupriavidus taiwanensis		310	272
No Yes	Ralstonia metallidurans CH34		345	308
No Yes	Ralstonia pickettii 12J		292	254
No Yes	Ralstonia solanacearum GMI1000		207	178
No Yes	Polynucleobacter necessarius ssp. asymbioticus QLW-P1DMWA-1		145	122
No Yes	Burkholderia phytofirmans PsJN		446	372
No Yes	Burkholderia phymatum STM815		331	284
No Yes	Burkholderia thailandensis E264		333	283
No Yes	Burkholderia pseudomallei K96243		332	286
No Yes	Burkholderia mallei ATCC 23344		277	242
No Yes	Burkholderia sp. 383		359	315
No Yes	Burkholderia ambifaria AMMD		347	302
No Yes	Burkholderia cenocepacia AU 1054		355	309
No Yes	Burkholderia multivorans ATCC 17616		361	313
No Yes	Burkholderia vietnamiensis G4		365	316
No Yes	Burkholderia xenovorans LB400		517	449
No Yes	Burkholderia glumae BGR1		298	255
No Yes	Verminephrobacter eiseniae EF01-2		468	405
No Yes	Delftia acidovorans SPH-1		352	314
No Yes	Polaromonas sp. JS666		312	278
No Yes	Polaromonas naphthalenivorans CJ2		288	258
No Yes	Variovorax paradoxus S110		415	357
No Yes	Rhodoferax ferrireducens T118		320	285
No Yes	Diaphorobacter sp. TPSY		240	209
No Yes	Acidovorax sp. JS42		291	254
No Yes	Acidovorax citrulli AAC00-1		305	261
No Yes	Comamonas sp. CNB-1		268	238
No Yes	Herminiimonas arsenicoxydans		220	191
No Yes	Janthinobacterium sp. Marseille		244	214
No Yes	Bordetella petrii DSM 12804		325	285
No Yes	Bordetella avium 197N		240	204
No Yes	Bordetella pertussis Tohama I		218	187
No Yes	Bordetella parapertussis 12822		281	246
No Yes	Bordetella bronchiseptica RB50		322	282
No Yes	Nitrosospira multiformis ATCC 25196		172	150
No Yes	Nitrosomonas eutropha C91		177	154
No Yes	Nitrosomonas europaea ATCC 19718		186	159
No Yes	Caulobacter sp. K31		214	190
No Yes	Caulobacter crescentus CB15		172	153
No Yes	Caulobacter segnis ATCC 21756		185	165
No Yes	Phenylobacterium zucineum HLK1		176	151
No Yes	Erythrobacter litoralis HTCC2594		170	149
No Yes	Sphingopyxis alaskensis RB2256		173	149
No Yes	Novosphingobium aromaticivorans DSM 12444		180	154
No Yes	Sphingobium japonicum UT26S		221	193
No Yes	Sphingomonas wittichii RW1		203	177
No Yes	Zymomonas mobilis ssp. mobilis ZM4		140	119
No Yes	Maricaulis maris MCS10		176	153
No Yes	Hirschia baltica ATCC 49814		173	149
No Yes	Hyphomonas neptunium ATCC 15444		188	158
No Yes	Dinoroseobacter shibae DFL 12		266	236
No Yes	Jannaschia sp. CCS1		278	236
No Yes	Ruegeria sp. TM1040		201	177
No Yes	Ruegeria pomeroyi DSS-3		275	241
No Yes	Roseobacter denitrificans OCh 114		291	259
No Yes	Rhodobacter sphaeroides 2.4.1		296	259
No Yes	Rhodobacter capsulatus SB1003		293	263
No Yes	Paracoccus denitrificans PD1222		334	292
No Yes	Magnetospirillum magneticum AMB-1		245	214
No Yes	Rhodospirillum centenum SW		226	196
No Yes	Rhodospirillum rubrum ATCC 11170		321	281
No Yes	Azospirillum sp. B510		206	178
No Yes	Granulibacter bethesdensis CGDNIH1		174	152
No Yes	Gluconacetobacter diazotrophicus PAl 5		245	208
No Yes	Gluconobacter oxydans 621H		164	141
No Yes	Acetobacter pasteurianus IFO 3283-01		175	152
No Yes	alpha proteobacterium IMCC1322		199	172
No Yes	Candidatus Pelagibacter ubique HTCC1062		86	79
No Yes	Neorickettsia sennetsu Miyayama		64	58
No Yes	Neorickettsia risticii Illinois		64	59
No Yes	Ehrlichia chaffeensis Arkansas		80	71
No Yes	Ehrlichia canis Jake		77	69
No Yes	Ehrlichia ruminantium Welgevonden		77	69
No Yes	Anaplasma phagocytophilum HZ		83	72
No Yes	Anaplasma marginale St. Maries		82	72
No Yes	Anaplasma centrale Israel		82	72
No Yes	Orientia tsutsugamushi Boryong		78	71
No Yes	Rickettsia bellii RML369-C		114	98
No Yes	Rickettsia canadensis McKiel		85	73
No Yes	Rickettsia typhi Wilmington		85	75
No Yes	Rickettsia prowazekii Madrid E		85	75
No Yes	Rickettsia peacockii Rustic		85	73
No Yes	Rickettsia felis URRWXCal2		107	96
No Yes	Rickettsia massiliae MTU5		95	82
No Yes	Rickettsia africae ESF-5		91	79
No Yes	Rickettsia akari Hartford		84	74
No Yes	Rickettsia rickettsii Sheila Smith		94	82
No Yes	Rickettsia conorii Malish 7		97	85
No Yes	Wolbachia endosymbiont of Culex_quinquefasciatus Pel		91	81
No Yes	Wolbachia endosymbiont of Drosophila melanogaster (Genus only)		88	77
No Yes	Wolbachia endosymbiont TRS of Brugia malayi		69	61
No Yes	Wolbachia sp. wRi		92	80
No Yes	Xanthobacter autotrophicus Py2		353	310
No Yes	Azorhizobium caulinodans ORS 571		346	310
No Yes	Methylobacterium chloromethanicum CM4		267	231
No Yes	Methylobacterium extorquens PA1		262	226
No Yes	Methylobacterium sp. 4-46		391	344
No Yes	Methylobacterium populi BJ001		290	249
No Yes	Methylobacterium nodulans ORS 2060		343	295
No Yes	Methylobacterium radiotolerans JCM 2831		293	257
No Yes	Candidatus Hodgkinia cicadicola Dsem		9	9
No Yes	Ochrobactrum anthropi ATCC 49188		358	303
No Yes	Brucella microti CCM 4915		243	212
No Yes	Brucella canis ATCC 23365		227	198
No Yes	Brucella suis 1330		228	198
No Yes	Brucella melitensis bv. 1 16M		246	217
No Yes	Brucella ovis ATCC 25840		223	196
No Yes	Brucella abortus bv. 1 9-941		229	200
No Yes	Sinorhizobium medicae WSM419		251	219
No Yes	Sinorhizobium meliloti 1021		246	212
No Yes	Rhizobium etli CFN 42		278	239
No Yes	Rhizobium sp. NGR234		250	214
No Yes	Rhizobium leguminosarum bv. viciae 3841		313	273
No Yes	Agrobacterium vitis S4		346	293
No Yes	Agrobacterium radiobacter K84		488	416
No Yes	Agrobacterium tumefaciens C58		365	311
No Yes	Candidatus Liberibacter asiaticus psy62		108	91
No Yes	Chelativorans sp. BNC1		299	254
No Yes	Parvibaculum lavamentivorans DS-1		215	187
No Yes	Mesorhizobium loti MAFF303099		442	378
No Yes	Methylocella silvestris BL2		223	193
No Yes	Beijerinckia indica ssp. indica ATCC 9039		219	190
No Yes	Oligotropha carboxidovorans OM5		237	206
No Yes	Rhodopseudomonas palustris CGA009		326	287
No Yes	Nitrobacter winogradskyi Nb-255		188	161
No Yes	Nitrobacter hamburgensis X14		242	211
No Yes	Bradyrhizobium sp. ORS278		431	374
No Yes	Bradyrhizobium japonicum USDA 110		465	408
No Yes	Bartonella tribocorum CIP 105476		162	135
No Yes	Bartonella henselae Houston-1		132	112
No Yes	Bartonella grahamii as4aup		147	128
No Yes	Bartonella quintana Toulouse		123	105
No Yes	Bartonella bacilliformis KC583		119	103
No Yes	Acidithiobacillus ferrooxidans ATCC 23270		225	195
No Yes	Mannheimia succiniciproducens MBEL55E		179	150
No Yes	Aggregatibacter aphrophilus NJ8700		175	150
No Yes	Aggregatibacter actinomycetemcomitans D11S-1		186	156
No Yes	Haemophilus somnus 129PT		155	126
No Yes	Pasteurella multocida ssp. multocida Pm70		179	150
No Yes	Haemophilus parasuis SH0165		165	139
No Yes	Haemophilus ducreyi 35000HP		139	119
No Yes	Haemophilus influenzae Rd KW20		153	130
No Yes	Actinobacillus succinogenes 130Z		179	148
No Yes	Actinobacillus pleuropneumoniae L20		180	153
No Yes	Tolumonas auensis DSM 9187		280	235
No Yes	Aeromonas salmonicida ssp. salmonicida A449		274	237
No Yes	Aeromonas hydrophila ssp. hydrophila ATCC 7966		276	240
No Yes	Aliivibrio salmonicida LFI1238		244	210
No Yes	Vibrio fischeri ES114		271	238
No Yes	Vibrio parahaemolyticus RIMD 2210633		314	272
No Yes	Vibrio harveyi ATCC BAA-1116		305	268
No Yes	Vibrio sp. Ex25		314	275
No Yes	Vibrio splendidus LGP32		311	268
No Yes	Vibrio vulnificus YJ016 (Good annotation)		312	269
No Yes	Vibrio cholerae O1 biov. El Tor N16961		254	220
No Yes	Photobacterium profundum SS9		347	299
No Yes	Psychromonas ingrahamii 37		288	245
No Yes	Idiomarina loihiensis L2TR		175	152
No Yes	Shewanella piezotolerans WP3		254	223
No Yes	Shewanella loihica PV-4		235	208
No Yes	Shewanella halifaxensis HAW-EB4		269	223
No Yes	Shewanella sediminis HAW-EB3		278	243
No Yes	Shewanella denitrificans OS217		224	194
No Yes	Shewanella pealeana ATCC 700345		269	223
No Yes	Shewanella oneidensis MR-1		246	210
No Yes	Shewanella baltica OS155		279	244
No Yes	Shewanella woodyi ATCC 51908		267	231
No Yes	Shewanella sp. MR-7		243	205
No Yes	Shewanella amazonensis SB2B		221	191
No Yes	Shewanella violacea DSS12		237	204
No Yes	Shewanella frigidimarina NCIMB 400		250	216
No Yes	Shewanella putrefaciens CN-32		260	222
No Yes	Colwellia psychrerythraea 34H		265	233
No Yes	Pseudoalteromonas atlantica T6c		246	216
No Yes	Pseudoalteromonas haloplanktis TAC125		222	191
No Yes	Teredinibacter turnerae T7901		228	201
No Yes	Saccharophagus degradans 2-40		221	190
No Yes	Marinobacter aquaeolei VT8		306	270
No Yes	Alteromonas macleodii Deep ecotype		223	192
No Yes	Hahella chejuensis KCTC 2396		378	328
No Yes	Alcanivorax borkumensis SK2		184	156
No Yes	Marinomonas sp. MWYL1		323	279
No Yes	Chromohalobacter salexigens DSM 3043		233	197
No Yes	Methylococcus capsulatus Bath		226	196
No Yes	Dichelobacter nodosus VCS1703A		129	113
No Yes	Stenotrophomonas maltophilia R551-3		214	188
No Yes	Xylella fastidiosa 9a5c		152	130
No Yes	Xanthomonas axonopodis pv. citri 306		228	200
No Yes	Xanthomonas albilineans		200	174
No Yes	Xanthomonas oryzae pv. oryzae KACC10331		200	173
No Yes	Xanthomonas campestris pv. campestris ATCC 33913 (Completed 2001)		230	195
No Yes	Halothiobacillus neapolitanus c2		189	164
No Yes	Alkalilimnicola ehrlichii MLHE-1		246	212
No Yes	Thioalkalivibrio sp. HL-EbGR7		230	199
No Yes	Halorhodospira halophila SL1		210	184
No Yes	Allochromatium vinosum DSM 180		244	215
No Yes	Nitrosococcus halophilus Nc4		254	221
No Yes	Nitrosococcus oceani ATCC 19707		231	198
No Yes	Coxiella burnetii RSA 493		128	109
No Yes	Legionella longbeachae NSW150		193	166
No Yes	Legionella pneumophila ssp. pneumophila Philadelphia 1		174	152
No Yes	Kangiella koreensis DSM 16069		149	131
No Yes	Baumannia cicadellinicola Hc		64	58
No Yes	Candidatus Carsonella ruddii PV		10	10
No Yes	Candidatus Vesicomyosocius okutanii HA		87	73
No Yes	Candidatus Ruthia magnifica Cm		84	71
No Yes	Cronobacter turicensis z3032		260	218
No Yes	Cronobacter sakazakii ATCC BAA-894		251	212
No Yes	Candidatus Riesia pediculicola USDA		40	38
No Yes	Dickeya zeae Ech1591		327	281
No Yes	Dickeya dadantii Ech703		320	277
No Yes	Candidatus Hamiltonella defensa 5AT		150	127
No Yes	Candidatus Blochmannia floridanus		55	50
No Yes	Pectobacterium wasabiae WPP163		321	273
No Yes	Pectobacterium atrosepticum SCRI1043		313	273
No Yes	Pectobacterium carotovorum ssp. carotovorum PC1		313	271
No Yes	Sodalis glossinidius morsitans		178	152
No Yes	Pantoea ananatis LMG 20103		285	240
No Yes	Wigglesworthia glossinidia		59	53
No Yes	Buchnera aphidicola APS		61	54
No Yes	Photorhabdus asymbiotica		252	219
No Yes	Photorhabdus luminescens ssp. laumondii TTO1		262	231
No Yes	Edwardsiella ictaluri 93-146		225	192
No Yes	Edwardsiella tarda EIB202		231	200
No Yes	Yersinia pseudotuberculosis IP 32953		307	256
No Yes	Yersinia pestis CO92		320	277
No Yes	Yersinia enterocolitica ssp. enterocolitica 8081		287	244
No Yes	Xenorhabdus bovienii SS-2004		234	203
No Yes	Shigella sonnei Ss046		277	242
No Yes	Shigella flexneri 2a 2457T		240	205
No Yes	Shigella dysenteriae Sd197		222	191
No Yes	Shigella boydii Sb227		237	203
No Yes	Serratia proteamaculans 568		316	273
No Yes	Salmonella enterica ssp. enterica ser. Typhimurium LT2		260	223
No Yes	Proteus mirabilis HI4320		243	208
No Yes	Klebsiella variicola At-22		336	291
No Yes	Klebsiella pneumoniae ssp. pneumoniae MGH 78578		322	273
No Yes	Escherichia fergusonii ATCC 35469		262	223
No Yes	Escherichia coli K-12 subMG1655		265	225
No Yes	Erwinia tasmaniensis Et1/99		243	207
No Yes	Erwinia pyrifoliae Ep1/96		239	205
No Yes	Erwinia amylovora ATCC 49946		234	200
No Yes	Enterobacter sp. 638		271	232
No Yes	Citrobacter rodentium ICC168		283	245
No Yes	Citrobacter koseri ATCC BAA-895		306	266
No Yes	Azotobacter vinelandii DJ		322	280
No Yes	Pseudomonas entomophila L48		302	266
No Yes	Pseudomonas syringae pv. tomato DC3000		377	329
No Yes	Pseudomonas stutzeri A1501		302	255
No Yes	Pseudomonas putida KT2440		327	282
No Yes	Pseudomonas fluorescens Pf-5		346	301
No Yes	Pseudomonas mendocina ymp		290	256
No Yes	Pseudomonas aeruginosa PAO1		320	277
No Yes	Cellvibrio japonicus Ueda107		247	213
No Yes	Psychrobacter sp. PRwf-1		163	140
No Yes	Psychrobacter arcticus 273-4		145	125
No Yes	Psychrobacter cryohalolentis K5		174	148
No Yes	Acinetobacter sp. ADP1		177	153
No Yes	Acinetobacter baumannii ATCC 17978		175	152
No Yes	Thiomicrospira crunogena XCL-2		169	144
No Yes	Francisella philomiragia ssp. philomiragia ATCC 25017		130	110
No Yes	Francisella tularensis ssp. tularensis SCHU S4		120	104
No Yes	Gloeobacter violaceus PCC 7421		258	227
No Yes	Acaryochloris marina MBIC11017		353	319
No Yes	Prochlorococcus marinus MIT 9313		170	144
No Yes	Nostoc punctiforme PCC 73102		379	334
No Yes	Nostoc sp. PCC 7120		350	311
No Yes	Anabaena variabilis ATCC 29413		348	310
No Yes	Trichodesmium erythraeum IMS101		353	313
No Yes	Thermosynechococcus elongatus BP-1		187	166
No Yes	cyanobacterium UCYN-A		118	101
No Yes	Cyanothece sp. ATCC 51142		310	276
No Yes	Synechocystis sp. PCC 6803		210	183
No Yes	Synechococcus elongatus PCC 6301		188	162
No Yes	Microcystis aeruginosa NIES-843		319	284
No Yes	Nitrosopumilus maritimus SCM1		79	70
No Yes	Nanoarchaeum equitans Kin4-M		41	38
No Yes	Candidatus Korarchaeum cryptofilum OPF8		145	127
No Yes	Methanocella paludicola SANAE		181	164
No Yes	Methanosaeta thermophila PT		114	102
No Yes	Methanococcoides burtonii DSM 6242		165	145
No Yes	Methanosarcina acetivorans C2A		299	272
No Yes	Methanosarcina mazei Go1		212	183
No Yes	Methanosarcina barkeri Fusaro		235	213
No Yes	Methanohalophilus mahii DSM 5219		134	119
No Yes	Methanosphaerula palustris E1-9c		157	140
No Yes	Candidatus Methanoregula boonei 6A8		152	134
No Yes	Methanospirillum hungatei JF-1		220	204
No Yes	Methanocorpusculum labreanum Z		132	117
No Yes	Methanoculleus marisnigri JR1		149	136
No Yes	Methanopyrus kandleri AV19		106	95
No Yes	Ferroglobus placidus DSM 10642		143	134
No Yes	Archaeoglobus profundus DSM 5631		129	119
No Yes	Archaeoglobus fulgidus DSM 4304		149	136
No Yes	Thermococcus onnurineus NA1		137	122
No Yes	Thermococcus kodakarensis KOD1		173	158
No Yes	Thermococcus gammatolerans EJ3		166	153
No Yes	Thermococcus sibiricus MM 739		149	136
No Yes	Pyrococcus horikoshii OT3		162	145
No Yes	Pyrococcus abyssi GE5		165	149
No Yes	Pyrococcus furiosus DSM 3638		172	159
No Yes	Thermoplasma volcanium GSS1		101	92
No Yes	Thermoplasma acidophilum DSM 1728		103	93
No Yes	Picrophilus torridus DSM 9790		93	87
No Yes	Haloquadratum walsbyi DSM 16790		198	174
No Yes	Halomicrobium mukohataei DSM 12286		185	169
No Yes	Halorhabdus utahensis DSM 12940		179	159
No Yes	Haloterrigena turkmenica DSM 5511		182	167
No Yes	Natronomonas pharaonis DSM 2160		159	146
No Yes	Natrialba magadii ATCC 43099		188	170
No Yes	Halorubrum lacusprofundi ATCC 49239		211	185
No Yes	Haloferax volcanii DS2		182	163
No Yes	Halobacterium salinarum R1		132	119
No Yes	Halobacterium sp. NRC-1		131	118
No Yes	Haloarcula marismortui ATCC 43049		206	186
No Yes	Methanocaldococcus sp. FS406-22		152	136
No Yes	Methanocaldococcus fervens AG86		122	110
No Yes	Methanocaldococcus vulcanius M7		130	114
No Yes	Methanocaldococcus jannaschii DSM 2661		152	138
No Yes	Methanococcus aeolicus Nankai-3		102	91
No Yes	Methanococcus maripaludis S2		114	103
No Yes	Methanococcus vannielii SB		119	104
No Yes	Methanothermobacter thermautotrophicus Delta H		133	119
No Yes	Methanosphaera stadtmanae DSM 3091		101	87
No Yes	Methanobrevibacter ruminantium M1		129	112
No Yes	Methanobrevibacter smithii ATCC 35061		113	102
No Yes	uncultured methanogenic archaeon RC-I		170	153
No Yes	Aciduliprofundum boonei T469		136	120
No Yes	Hyperthermus butylicus DSM 5456		131	117
No Yes	Aeropyrum pernix K1		131	118
No Yes	Ignicoccus hospitalis KIN4/I		102	90
No Yes	Staphylothermus marinus F1		126	110
No Yes	Desulfurococcus kamchatkensis 1221n		108	98
No Yes	Metallosphaera sedula DSM 5348		154	139
No Yes	Sulfolobus tokodaii 7		168	152
No Yes	Sulfolobus islandicus Y.N.15.51		144	132
No Yes	Sulfolobus solfataricus P2		177	160
No Yes	Sulfolobus acidocaldarius DSM 639		129	118
No Yes	Thermofilum pendens Hrk 5		172	157
No Yes	Caldivirga maquilingensis IC-167		120	112
No Yes	Pyrobaculum calidifontis JCM 11548		180	162
No Yes	Pyrobaculum arsenaticum DSM 13514		163	149
No Yes	Pyrobaculum aerophilum IM2		191	173
No Yes	Pyrobaculum islandicum DSM 4184		161	143
No Yes	Thermoproteus neutrophilus V24Sta		173	157
No Yes	Drosophila melanogaster FlyBase 5.12 (all transcripts) (FlyBase)	Fruit fly	1055	876
No Yes	Caenorhabditis elegans WormBase WS194 (all transcripts) (WormBase)	Nematode	768	626
No Yes	Cryptococcus neoformans var. grubii H99		427	320
No Yes	Cryptococcus neoformans B-3501A		424	323
No Yes	Ajellomyces dermatitidis ER-3		470	357
No Yes	Histoplasma capsulatum H143		432	346
No Yes	Histoplasma capsulatum H88		446	344
No Yes	Histoplasma capsulatum G186AR		444	346
No Yes	Paracoccidioides brasiliensis Pb01		418	323
No Yes	Paracoccidioides brasiliensis Pb03		426	326
No Yes	Coccidioides posadasii str. Silveira		446	347
No Yes	Coccidioides immitis RMSCC 3703		422	347
No Yes	Coccidioides immitis RMSCC 2394		449	350
No Yes	Coccidioides immitis H538.4		434	350
No Yes	Aspergillus fumigatus A1163		524	390
No Yes	Candida albicans WO-1		381	291
No Yes	Saccharomyces cerevisiae YJM789		407	317
No Yes	Saccharomyces cerevisiae RM11-1a		368	288
No Yes	Saccharomyces cerevisiae Ensembl 49_1h (all transcripts)	Baker's yeast	430	327
No Yes	Schizosaccharomyces pombe 972h-		378	291
No Yes	Batrachochytrium dendrobatidis JAM81		509	406
No Yes	Oryza sativa ssp. Indica (Subspecies)	Indian rice	2063	1744
No Yes	Plasmodium falciparum HB3		357	278
No Yes	Plasmodium falciparum Dd2		291	229
No Yes	Candidatus Phytoplasma australiense		95	85
No Yes	Ureaplasma parvum ser. 3 ATCC 27815		67	63
No Yes	Mycoplasma agalactiae		95	86
No Yes	Mycoplasma hyopneumoniae 7448		94	80
No Yes	Mycoplasma hyopneumoniae J		91	77
No Yes	Leptospira borgpetersenii ser. Hardjo-bovis JB197		161	138
No Yes	Leptospira interrogans ser. Copenhageni Fiocruz L1-130		166	144
No Yes	Leptospira biflexa ser. Patoc Patoc 1 (Ames)		171	148
No Yes	Treponema pallidum ssp. pallidum SS14		101	86
No Yes	Borrelia burgdorferi ZS7		96	79
No Yes	Bifidobacterium longum ssp. infantis ATCC 15697		228	196
No Yes	Bifidobacterium longum		187	155
No Yes	Bifidobacterium animalis ssp. lactis Bl-04		164	136
No Yes	Bifidobacterium animalis ssp. lactis DSM 10140		164	136
No Yes	Frankia sp. EAN1pec		462	412
No Yes	Propionibacterium acnes SK137		208	181
No Yes	Mycobacterium sp. KMS		292	247
No Yes	Mycobacterium sp. JLS		291	247
No Yes	Mycobacterium avium 104		218	189
No Yes	Mycobacterium tuberculosis KZN 1435		219	182
No Yes	Mycobacterium tuberculosis H37Ra		221	185
No Yes	Mycobacterium tuberculosis F11		218	182
No Yes	Mycobacterium tuberculosis CDC1551		220	183
No Yes	Mycobacterium bovis BCG Tokyo 172		218	182
No Yes	Mycobacterium bovis BCG Pasteur 1173P2		224	187
No Yes	Mycobacterium leprae Br4923		120	98
No Yes	Corynebacterium glutamicum R		232	190
No Yes	Corynebacterium glutamicum ATCC 13032 Bielefeld		249	201
No Yes	Tropheryma whipplei TW08/27		90	76
No Yes	Clavibacter michiganensis ssp. sepedonicus		223	183
No Yes	Dehalococcoides sp. GT		113	95
No Yes	Dehalococcoides sp. VS		115	99
No Yes	Dehalococcoides sp. BAV1		114	98
No Yes	Chlorobium phaeobacteroides BS1		190	167
No Yes	Porphyromonas gingivalis ATCC 33277		157	136
No Yes	Bacteroides fragilis YCH46		237	207
No Yes	Salinibacter ruber		192	168
No Yes	Candidatus Sulcia muelleri DMIN		19	17
No Yes	Candidiatus Sulcia muelleri SMDSEM		22	20
No Yes	Blattabacterium sp. BPLAN		52	46
No Yes	Chlamydophila pneumoniae J138		92	76
No Yes	Chlamydophila pneumoniae CWL029		90	74
No Yes	Chlamydophila pneumoniae AR39		90	74
No Yes	Chlamydia trachomatis B/TZ1A828/OT		87	71
No Yes	Chlamydia trachomatis B/Jali20/OT		87	71
No Yes	Chlamydia trachomatis L2b/UCH-1/proctitis		88	72
No Yes	Chlamydia trachomatis 434/Bu		88	72
No Yes	Chlamydia trachomatis A/HAR-13		87	71
No Yes	Thermus thermophilus HB8		143	129
No Yes	Desulfitobacterium hafniense DCB-2		412	369
No Yes	Clostridium kluyveri NBRC 12016		265	239
No Yes	Clostridium perfringens SM101		212	179
No Yes	Clostridium perfringens ATCC 13124		211	183
No Yes	Clostridium difficile R20291		290	259
No Yes	Clostridium difficile CD196		281	252
No Yes	Clostridium botulinum F Langeland		289	257
No Yes	Clostridium botulinum E3 Alaska E43		239	207
No Yes	Clostridium botulinum B1 Okra		295	261
No Yes	Clostridium botulinum Ba4 657		291	258
No Yes	Clostridium botulinum B Eklund 17B		228	197
No Yes	Clostridium botulinum A2 Kyoto		300	265
No Yes	Clostridium botulinum A3 Loch Maree		302	266
No Yes	Clostridium botulinum A Hall		289	256
No Yes	Clostridium botulinum A ATCC 19397		294	261
No Yes	Lactobacillus casei BL23		240	210
No Yes	Lactobacillus rhamnosus Lc 705		246	216
No Yes	Lactobacillus johnsonii FI9785		176	152
No Yes	Lactobacillus reuteri JCM 1112		163	138
No Yes	Lactobacillus plantarum JDM1		219	191
No Yes	Lactobacillus delbrueckii ssp. bulgaricus ATCC BAA-365		172	147
No Yes	Lactococcus lactis ssp. lactis KF147		186	163
No Yes	Lactococcus lactis ssp. cremoris MG1363		182	158
No Yes	Lactococcus lactis ssp. cremoris SK11		155	132
No Yes	Streptococcus equi ssp. equi 4047		177	153
No Yes	Streptococcus equi ssp. zooepidemicus		188	163
No Yes	Streptococcus pyogenes MGAS10750		179	155
No Yes	Streptococcus pyogenes MGAS10270		166	145
No Yes	Streptococcus pyogenes MGAS2096		179	156
No Yes	Streptococcus pyogenes MGAS9429		167	143
No Yes	Streptococcus pyogenes MGAS6180		166	143
No Yes	Streptococcus pyogenes NZ131		163	139
No Yes	Streptococcus pyogenes MGAS8232		162	140
No Yes	Streptococcus pyogenes MGAS10394		167	141
No Yes	Streptococcus pyogenes Manfredo		160	137
No Yes	Streptococcus pyogenes MGAS315		166	144
No Yes	Streptococcus pyogenes SSI-1		163	141
No Yes	Streptococcus pyogenes MGAS5005		164	142
No Yes	Streptococcus pneumoniae ATCC 700669		200	173
No Yes	Streptococcus pneumoniae CGSP14		206	179
No Yes	Streptococcus pneumoniae G54		190	163
No Yes	Streptococcus pneumoniae P1031		187	162
No Yes	Streptococcus pneumoniae JJA		188	161
No Yes	Streptococcus pneumoniae 70585		192	164
No Yes	Streptococcus pneumoniae Hungary19A-6		188	164
No Yes	Streptococcus pneumoniae Taiwan19F-14		185	159
No Yes	Streptococcus pneumoniae D39		184	157
No Yes	Streptococcus pneumoniae R6 (Non-virulent)		190	163
No Yes	Streptococcus agalactiae A909		182	156
No Yes	Streptococcus agalactiae 2603V/R		184	159
No Yes	Streptococcus mutans NN2025		188	161
No Yes	Streptococcus thermophilus LMD-9		158	136
No Yes	Streptococcus thermophilus CNRZ1066 (Younger strain)		175	153
No Yes	Streptococcus suis BM407		198	172
No Yes	Streptococcus suis SC84		198	171
No Yes	Streptococcus suis 98HAH33		201	177
No Yes	Streptococcus suis P1/7		184	158
No Yes	Listeria monocytogenes 08-5578		215	189
No Yes	Listeria monocytogenes 08-5923		215	189
No Yes	Listeria monocytogenes Clip80459		218	189
No Yes	Listeria monocytogenes HCC23		212	185
No Yes	Listeria monocytogenes 4b F2365		218	186
No Yes	Geobacillus sp. Y412MC61		238	207
No Yes	Geobacillus sp. Y412MC10		394	344
No Yes	Bacillus licheniformis ATCC 14580		244	215
No Yes	Bacillus cytotoxicus NVH 391-98		241	207
No Yes	Bacillus thuringiensis Al Hakam		314	273
No Yes	Bacillus cereus 03BB102		310	266
No Yes	Bacillus cereus AH820		306	266
No Yes	Bacillus cereus AH187		306	268
No Yes	Bacillus cereus B4264		295	257
No Yes	Bacillus cereus G9842		301	258
No Yes	Bacillus cereus Q1		314	276
No Yes	Bacillus cereus E33L		315	276
No Yes	Bacillus cereus ATCC 10987		322	277
No Yes	Bacillus anthracis A0248		289	250
No Yes	Bacillus anthracis CDC 684		307	267
No Yes	Bacillus anthracis Sterne		307	267
No Yes	Bacillus anthracis Ames		295	255
No Yes	Bacillus megaterium DSM319		263	225
No Yes	Staphylococcus epidermidis ATCC 12228		176	153
No Yes	Staphylococcus aureus RF122		175	153
No Yes	Staphylococcus aureus ssp. aureus ED98		191	165
No Yes	Staphylococcus aureus ssp. aureus Newman		188	162
No Yes	Staphylococcus aureus ssp. aureus Mu3		191	167
No Yes	Staphylococcus aureus ssp. aureus USA300_TCH1516		186	159
No Yes	Staphylococcus aureus ssp. aureus USA300_FPR3757		192	165
No Yes	Staphylococcus aureus ssp. aureus JH1		189	162
No Yes	Staphylococcus aureus ssp. aureus JH9		189	162
No Yes	Staphylococcus aureus ssp. aureus MSSA476		189	162
No Yes	Staphylococcus aureus ssp. aureus MRSA252		193	165
No Yes	Staphylococcus aureus ssp. aureus MW2		189	162
No Yes	Staphylococcus aureus ssp. aureus N315		184	160
No Yes	Staphylococcus aureus ssp. aureus Mu50		192	168
No Yes	Staphylococcus aureus ssp. aureus COL		186	161
No Yes	Campylobacter jejuni RM1221		121	110
No Yes	Campylobacter jejuni ssp. jejuni 81116		122	109
No Yes	Campylobacter jejuni ssp. jejuni 81-176		121	110
No Yes	Campylobacter jejuni ssp. doylei 269.97		123	110
No Yes	Helicobacter pylori B38		109	95
No Yes	Helicobacter pylori P12		129	115
No Yes	Helicobacter pylori G27		119	106
No Yes	Helicobacter pylori Shi470		118	103
No Yes	Helicobacter pylori HPAG1		122	108
No Yes	Helicobacter pylori J99		127	112
No Yes	Desulfovibrio vulgaris DP4		233	208
No Yes	Desulfovibrio vulgaris Miyazaki F		254	229
No Yes	Desulfovibrio desulfuricans ssp. desulfuricans ATCC 27774		190	164
No Yes	Geobacter sp. M21		284	252
No Yes	Anaeromyxobacter sp. K		292	265
No Yes	Anaeromyxobacter dehalogenans 2CP-1		285	260
No Yes	Azoarcus sp. BH72		282	241
No Yes	Neisseria meningitidis alpha14		139	119
No Yes	Neisseria meningitidis 053442		137	119
No Yes	Neisseria meningitidis FAM18		139	121
No Yes	Neisseria meningitidis MC58		138	119
No Yes	Neisseria gonorrhoeae NCCP11945		150	129
No Yes	Ralstonia eutropha H16		353	313
No Yes	Ralstonia pickettii 12D		276	235
No Yes	Polynucleobacter necessarius ssp. necessarius STIR1		99	85
No Yes	Burkholderia sp. CCGE1002		384	324
No Yes	Burkholderia pseudomallei MSHR346		237	211
No Yes	Burkholderia pseudomallei 1106a		331	285
No Yes	Burkholderia pseudomallei 668		327	283
No Yes	Burkholderia pseudomallei 1710b		320	275
No Yes	Burkholderia mallei NCTC 10229		282	245
No Yes	Burkholderia mallei NCTC 10247		291	253
No Yes	Burkholderia mallei SAVP1		277	239
No Yes	Burkholderia ambifaria MC40-6		334	288
No Yes	Burkholderia cenocepacia MC0-3		372	327
No Yes	Burkholderia cenocepacia HI2424		362	318
No Yes	Burkholderia cenocepacia J2315		361	312
No Yes	Burkholderia multivorans ATCC 17616		344	297
No Yes	Caulobacter crescentus NA1000		178	156
No Yes	Zymomonas mobilis ssp. mobilis NCIMB 11163		149	127
No Yes	Rhodobacter sphaeroides KD131		320	278
No Yes	Rhodobacter sphaeroides ATCC 17025		232	206
No Yes	Rhodobacter sphaeroides ATCC 17029		329	287
No Yes	Gluconacetobacter diazotrophicus PAl 5		250	213
No Yes	Ehrlichia ruminantium Gardel		76	68
No Yes	Ehrlichia ruminantium Welgevonden		77	69
No Yes	Anaplasma marginale Florida		84	74
No Yes	Orientia tsutsugamushi Ikeda		165	149
No Yes	Rickettsia bellii OSU 85-389		108	93
No Yes	Rickettsia rickettsii Iowa		97	85
No Yes	Methylobacterium extorquens DM4		293	254
No Yes	Methylobacterium extorquens AM1		259	226
No Yes	Brucella suis ATCC 23445		229	201
No Yes	Brucella melitensis ATCC 23457		226	199
No Yes	Brucella abortus S19		242	212
No Yes	Brucella melitensis biov. Abortus 2308		234	206
No Yes	Rhizobium etli CIAT 652		290	250
No Yes	Rhizobium leguminosarum bv. trifolii WSM2304		277	243
No Yes	Rhizobium leguminosarum bv. trifolii WSM1325		311	267
No Yes	Rhodopseudomonas palustris TIE-1		320	285
No Yes	Rhodopseudomonas palustris HaA2		311	273
No Yes	Rhodopseudomonas palustris BisB5		285	252
No Yes	Rhodopseudomonas palustris BisB18		327	290
No Yes	Rhodopseudomonas palustris BisA53		314	283
No Yes	Bradyrhizobium sp. BTAi1		498	434
No Yes	Acidithiobacillus ferrooxidans ATCC 53993		223	193
No Yes	Haemophilus somnus 2336		167	132
No Yes	Haemophilus influenzae PittGG		127	108
No Yes	Haemophilus influenzae PittEE		136	116
No Yes	Haemophilus influenzae 86-028NP		152	130
No Yes	Actinobacillus pleuropneumoniae ser. 3 JL03		182	152
No Yes	Actinobacillus pleuropneumoniae ser. 7 AP76		188	163
No Yes	Vibrio fischeri MJ11		280	244
No Yes	Vibrio vulnificus CMCP6 (Poor annotation)		308	274
No Yes	Vibrio cholerae M66-2		252	218
No Yes	Vibrio cholerae O395		261	227
No Yes	Vibrio cholerae MJ-1236		264	230
No Yes	Shewanella sp. W3-18-1		251	219
No Yes	Shewanella sp. ANA-3		274	234
No Yes	Shewanella baltica OS223		251	211
No Yes	Shewanella baltica OS185		261	223
No Yes	Shewanella baltica OS195		265	226
No Yes	Shewanella sp. MR-4		250	214
No Yes	Stenotrophomonas maltophilia K279a		219	192
No Yes	Xylella fastidiosa M23		150	124
No Yes	Xylella fastidiosa M12		141	122
No Yes	Xylella fastidiosa Temecula1		148	122
No Yes	Xanthomonas campestris pv. vesicatoria 85-10 (Completed 2005)		229	196
No Yes	Xanthomonas oryzae pv. oryzae PXO99A		217	187
No Yes	Xanthomonas oryzae pv. oryzae MAFF 311018		210	182
No Yes	Xanthomonas campestris pv. campestris B100		230	198
No Yes	Xanthomonas campestris pv. campestris 8004 (Completed 2005)		239	203
No Yes	Thioalkalivibrio sp. K90mix		191	164
No Yes	Coxiella burnetii CbuK_Q154		134	114
No Yes	Coxiella burnetii CbuG_Q212		122	104
No Yes	Coxiella burnetii Dugway 5J108-111		135	116
No Yes	Coxiella burnetii RSA 331		124	106
No Yes	Legionella pneumophila Corby		177	156
No Yes	Legionella pneumophila Paris		171	149
No Yes	Legionella pneumophila Lens		169	146
No Yes	Dickeya dadantii Ech586		301	257
No Yes	Candidatus Blochmannia pennsylvanicus BPEN		61	53
No Yes	Buchnera aphidicola Cc		42	37
No Yes	Buchnera aphidicola Bp		57	50
No Yes	Buchnera aphidicola Tuc7		60	53
No Yes	Buchnera aphidicola 5A		61	54
No Yes	Buchnera aphidicola Sg		55	50
No Yes	Yersinia pseudotuberculosis PB1/+		310	260
No Yes	Yersinia pseudotuberculosis YPIII		301	251
No Yes	Yersinia pseudotuberculosis IP 31758		307	256
No Yes	Yersinia pestis Z176003		324	278
No Yes	Yersinia pestis Pestoides F		311	266
No Yes	Yersinia pestis Nepal516		325	278
No Yes	Yersinia pestis Antiqua		369	323
No Yes	Yersinia pestis Angola		305	268
No Yes	Yersinia pestis biov. Microtus 91001		320	271
No Yes	Yersinia pestis KIM		320	275
No Yes	Shigella flexneri 5 8401		248	207
No Yes	Shigella flexneri 2a 301		248	211
No Yes	Shigella boydii CDC 3083-94		227	194
No Yes	Salmonella enterica ssp. arizonae ser. 62:z4,z23:--		255	223
No Yes	Salmonella enterica ssp. enterica ser. Schwarzengrund CVM19633		250	215
No Yes	Salmonella enterica ssp. enterica ser. Enteritidis P125109		246	211
No Yes	Salmonella enterica ssp. enterica ser. Choleraesuis str. SC-B67		241	207
No Yes	Salmonella enterica ssp. enterica ser. Newport SL254		260	221
No Yes	Salmonella enterica ssp. enterica ser. Dublin CT_02021853		243	208
No Yes	Salmonella enterica ssp. enterica ser. Typhi CT18		251	215
No Yes	Salmonella enterica ssp. enterica ser. Typhi Ty2		251	215
No Yes	Salmonella enterica ssp. enterica ser. Agona SL483		250	213
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi C RKS4594		252	215
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi B SPB7		264	226
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi A AKU_12601		247	211
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi A ATCC 9150		244	209
No Yes	Salmonella enterica ssp. enterica ser. Heidelberg SL476		263	224
No Yes	Salmonella enterica ssp. enterica ser. Gallinarum 287/91		234	200
No Yes	Klebsiella pneumoniae 342		340	294
No Yes	Klebsiella pneumoniae NTUH-K2044		339	288
No Yes	Escherichia coli ED1a		285	246
No Yes	Escherichia coli IAI39		276	237
No Yes	Escherichia coli UMN026		289	247
No Yes	Escherichia coli 55989		287	244
No Yes	Escherichia coli S88		281	244
No Yes	Escherichia coli IAI1		267	226
No Yes	Escherichia coli BL21		251	216
No Yes	Escherichia coli ATCC 8739		269	229
No Yes	Escherichia coli BL21(DE3)		254	217
No Yes	Escherichia coli SMS-3-5		287	246
No Yes	Escherichia coli SE11		273	232
No Yes	Escherichia coli APEC O1		285	246
No Yes	Escherichia coli O103:H2 12009		288	244
No Yes	Escherichia coli UTI89		285	245
No Yes	Escherichia coli 536		296	257
No Yes	Escherichia coli HS		266	227
No Yes	Escherichia coli E24377A		291	248
No Yes	Escherichia coli O55:H7 CB9615		288	243
No Yes	Escherichia coli O26:H11 11368		288	246
No Yes	Escherichia coli CFT073		292	251
No Yes	Escherichia coli O111:H- 11128		274	233
No Yes	Escherichia coli O127:H6 E2348/69		273	237
No Yes	Escherichia coli O157:H7 EDL933		295	249
No Yes	Escherichia coli O157:H7 TW14359		285	240
No Yes	Escherichia coli O157:H7 EC4115		280	235
No Yes	Escherichia coli O157:H7 Sakai		289	244
No Yes	Escherichia coli BW2952		262	222
No Yes	Escherichia coli K-12 subW3110		268	228
No Yes	Escherichia coli K-12 subDH10B		254	218
No Yes	Escherichia coli B REL606		258	220
No Yes	Erwinia amylovora CFBP1430		235	201
No Yes	Pseudomonas syringae pv. phaseolicola 1448A		344	295
No Yes	Pseudomonas syringae pv. syringae B728a		347	299
No Yes	Pseudomonas putida W619		312	272
No Yes	Pseudomonas putida F1		313	268
No Yes	Pseudomonas putida GB-1		328	282
No Yes	Pseudomonas fluorescens SBW25		359	313
No Yes	Pseudomonas fluorescens Pf0-1		347	298
No Yes	Pseudomonas aeruginosa LESB58		325	283
No Yes	Pseudomonas aeruginosa PA7		341	297
No Yes	Pseudomonas aeruginosa UCBPP-PA14		339	293
No Yes	Acinetobacter baumannii AB307-0294		169	147
No Yes	Acinetobacter baumannii AYE		170	147
No Yes	Acinetobacter baumannii SDF		143	122
No Yes	Acinetobacter baumannii AB0057		173	150
No Yes	Acinetobacter baumannii ACICU		169	145
No Yes	Francisella novicida U112		131	113
No Yes	Francisella tularensis ssp. mediasiatica FSC147		113	97
No Yes	Francisella tularensis ssp. holarctica FTNF002-00		118	101
No Yes	Francisella tularensis ssp. holarctica OSU18		116	99
No Yes	Francisella tularensis ssp. holarctica		127	109
No Yes	Francisella tularensis ssp. tularensis WY96-3418		121	104
No Yes	Francisella tularensis ssp. tularensis FSC198		120	104
No Yes	Prochlorococcus marinus NATL1A		142	121
No Yes	Prochlorococcus marinus MIT 9301		141	119
No Yes	Prochlorococcus marinus MIT 9515		137	116
No Yes	Prochlorococcus marinus AS9601		142	120
No Yes	Prochlorococcus marinus ssp. marinus CCMP1375		140	117
No Yes	Prochlorococcus marinus ssp. pastoris CCMP1986		138	118
No Yes	Prochlorococcus marinus MIT 9215		144	121
No Yes	Prochlorococcus marinus MIT 9211		138	116
No Yes	Prochlorococcus marinus MIT 9312		143	121
No Yes	Prochlorococcus marinus MIT 9303		173	148
No Yes	Prochlorococcus marinus NATL2A		139	119
No Yes	Cyanothece sp. PCC 8802		272	241
No Yes	Cyanothece sp. PCC 7425		310	269
No Yes	Cyanothece sp. PCC 7424		321	291
No Yes	Cyanothece sp. PCC 8801		273	241
No Yes	Synechococcus sp. JA-2-3Ba(2-13) (Poor annotation)		206	179
No Yes	Synechococcus sp. JA-3-3Ab (Poor annotation)		195	168
No Yes	Synechococcus sp. CC9902 (Poor annotation)		172	144
No Yes	Synechococcus sp. RCC307		166	141
No Yes	Synechococcus sp. CC9605 (Poor annotation)		180	155
No Yes	Synechococcus sp. WH 8102 (Good annotation)		190	163
No Yes	Synechococcus sp. CC9311		172	146
No Yes	Synechococcus sp. WH 7803		179	151
No Yes	Synechococcus sp. PCC 7002		192	168
No Yes	Synechococcus elongatus PCC 7942		188	162
No Yes	Methanococcus maripaludis C6		123	111
No Yes	Methanococcus maripaludis C7		129	117
No Yes	Methanococcus maripaludis C5		123	110
No Yes	Sulfolobus islandicus Y.G.57.14		158	144
No Yes	Sulfolobus islandicus L.S.2.15		160	144
No Yes	Sulfolobus islandicus M.16.27		153	140
No Yes	Sulfolobus islandicus M.14.25		157	142
No Yes	Sulfolobus islandicus M.16.4		156	141
No Yes	Sulfolobus islandicus L.D.8.5		158	143
No Yes	Ailuropoda melanoleuca (Draft)	Giant panda	980	827
No Yes	Moniliophthora perniciosa FA553 (Genome survey)		390	373
No Yes	Lotus japonicus (Early assembly)		227	198
No Yes	Prunus persica (Early draft)	Peach	1515	1267
No Yes	Manihot esculenta (Early draft)	Cassava	1561	1317
No Yes	Ricinus communis (Early assembly)	Castor bean	1327	1107
No Yes	Mimulus guttatus (Early draft)	Spotted monkey flower	1373	1150
No Yes	Phoenix dactylifera (Early draft)	Date palm	942	842
No Yes	Trypanosoma vivax (Parial)		529	434
No Yes	Trypanosoma congolense (Partial)		614	517
No Yes	Toxoplasma gondii GT1 (Early assembly)		431	336
No Yes	Toxoplasma gondii VEG (Early assembly)		421	325
No Yes	Toxoplasma gondii RH (Archived)		435	337
No Yes	Homo sapiens 49_36k (longest transcript per gene)	Human	1024	861
No Yes	Pan troglodytes 49_21h (longest transcript per gene)	Chimpanzee	946	797
No Yes	Gorilla gorilla 52_1 (longest transcript per gene)	Western Gorilla	804	690
No Yes	Pongo pygmaeus 49_1 (longest transcript per gene)	Bornean orangutan	929	785
No Yes	Macaca mulatta 49_10h (longest transcript per gene)	Rhesus monkey	993	854
No Yes	Callithrix jacchus 56_3 (longest transcript per gene)	White-tufted-ear marmoset	982	829
No Yes	Otolemur garnettii 49_1c (longest transcript per gene)	Small-eared galago	778	660
No Yes	Microcebus murinus 49_1 (longest transcript per gene)	Gray mouse lemur	825	701
No Yes	Tarsius syrichta 51_1 (longest transcript per gene)	Philippine tarsier	739	610
No Yes	Rattus norvegicus 49_34s (longest transcript per gene)	Norway rat	957	810
No Yes	Mus musculus 49_37b (longest transcript per gene)	House mouse	1002	840
No Yes	Spermophilus tridecemlineatus 49_1e (longest transcript per gene)	Thirteen-lined ground squirrel	737	628
No Yes	Dipodomys ordii 51_1 (longest transcript per gene)	Ord's kangaroo rat	851	716
No Yes	Cavia porcellus 51_3 (longest transcript per gene)	Domestic guinea pig	940	793
No Yes	Oryctolagus cuniculus 49_1f (longest transcript per gene)	Rabbit	734	625
No Yes	Ochotona princeps 49_1 (longest transcript per gene)	American pika	838	704
No Yes	Tupaia belangeri 49_1d (longest transcript per gene)	Northern tree shrew	742	634
No Yes	Sus scrofa 56_9 (longest transcript per gene)	Pig	774	657
No Yes	Bos taurus 49_3f (longest transcript per gene)	Cattle	1025	862
No Yes	Vicugna pacos 51_1 (longest transcript per gene)	Alpaca	629	521
No Yes	Tursiops truncatus 51_1 (longest transcript per gene)	Bottlenosed dolphin	883	738
No Yes	Canis familiaris 49_2g (longest transcript per gene)	Dog	992	836
No Yes	Felis catus 49_1c (longest transcript per gene)	Domestic cat	715	619
No Yes	Equus caballus 49_2 (longest transcript per gene)	Horse	977	819
No Yes	Myotis lucifugus 49_1e (longest transcript per gene)	Little brown bat	824	690
No Yes	Pteropus vampyrus 51_1 (longest transcript per gene)	Large flying fox	900	749
No Yes	Sorex araneus 49_1c (longest transcript per gene)	European shrew	684	575
No Yes	Erinaceus europaeus 49_1c (longest transcript per gene)	Western European hedgehog	766	640
No Yes	Procavia capensis 51_1 (longest transcript per gene)	Cape rock hyrax	839	708
No Yes	Loxodonta africana 49_1d (longest transcript per gene)	African savanna elephant	735	625
No Yes	Echinops telfairi 49_1e (longest transcript per gene)	Small Madagascar hedgehog	801	673
No Yes	Dasypus novemcinctus 49_1f (longest transcript per gene)	Nine-banded armadillo	705	590
No Yes	Macropus eugenii 55_1 (longest transcript per gene)	Tammar wallaby	818	700
No Yes	Monodelphis domestica 49_5d (longest transcript per gene)	Gray short-tailed opossum	972	819
No Yes	Ornithorhynchus anatinus 49_1f (longest transcript per gene)	Platypus	812	705
No Yes	Anolis carolinensis 55_1a (longest transcript per gene)	Green anole	930	804
No Yes	Taeniopygia guttata 57_1c (longest transcript per gene)	Zebra finch	895	765
No Yes	Meleagris gallopavo 57_2 (longest transcript per gene)	Turkey	803	691
No Yes	Gallus gallus 49_2g (longest transcript per gene)	Chicken	823	699
No Yes	Xenopus tropicalis 49_41i (longest transcript per gene)	Western clawed frog	919	805
No Yes	Danio rerio 49_7c (longest transcript per gene)	Zebrafish	1256	1075
No Yes	Gasterosteus aculeatus 49_1f (longest transcript per gene)	Three-spined stickleback	1135	980
No Yes	Oryzias latipes 49_1e (longest transcript per gene)	Japanese medaka	1054	904
No Yes	Tetraodon nigroviridis 49_1k (longest transcript per gene)	Spotted green pufferfish	1245	1095
No Yes	Takifugu rubripes 49_4i (longest transcript per gene)	Torafugu	1112	958
No Yes	Ciona savignyi 49_2f (longest transcript per gene)		514	443
No Yes	Ciona intestinalis 49_2i (longest transcript per gene)		647	562
No Yes	Apis mellifera 37.2d (longest transcript per gene) (Not maintained)	Honey bee	524	438
No Yes	Drosophila melanogaster FlyBase 5.12 (longest transcript per gene) (FlyBase)	Fruit fly	1055	876
No Yes	Drosophila melanogaster Ensembl 49_54 (longest transcript per gene)	Fruit fly	617	498
No Yes	Aedes aegypti 49_1b (longest transcript per gene)	Yellow fever mosquito	654	523
No Yes	Anopheles gambiae 49_3j (longest transcript per gene)	African malaria mosquito	577	470
No Yes	Caenorhabditis elegans WormBase WS194 (longest transcript per gene) (WormBase)	Nematode	636	510
No Yes	Caenorhabditis elegans Ensembl 49_180a (longest transcript per gene)	Nematode	640	514
No Yes	Arabidopsis thaliana 9 (longest transcript per gene)	Thale cress	1334	1089
No Yes	Oryza sativa ssp. japonica 5.0 (Not transposons)	Japanese rice	2011	1747
No Yes	NCBI viral sequences (Viral)		2674	2125
No Yes	PDB chains (SCOP 1.73) (PDB)		712	676
No Yes	TargetDB (Targets)		11450	9962
No Yes	UniProt 15.0 (UniProt)		430715	372081
No Yes	UniProt 15.0 viral sequences (Viral)		13037	8704