Actin-like ATPase domain superfamily domain assignments
in
Saccharomyces cerevisiae SGD

Select to display	Genome		Domains	Proteins
No Yes	ALL		124786	124786
No Yes	Homo sapiens 49_36k (all transcripts)	Human	233	125
No Yes	Pan troglodytes 49_21h (all transcripts)	Chimpanzee	187	97
No Yes	Gorilla gorilla 52_1 (all transcripts)	Western Gorilla	107	55
No Yes	Pongo pygmaeus 49_1 (all transcripts)	Bornean orangutan	140	68
No Yes	Macaca mulatta 49_10h (all transcripts)	Rhesus monkey	216	109
No Yes	Callithrix jacchus 56_3 (all transcripts)	White-tufted-ear marmoset	240	126
No Yes	Otolemur garnettii 49_1c (all transcripts)	Small-eared galago	110	56
No Yes	Microcebus murinus 49_1 (all transcripts)	Gray mouse lemur	101	50
No Yes	Tarsius syrichta 51_1 (all transcripts)	Philippine tarsier	80	44
No Yes	Rattus norvegicus 49_34s (all transcripts)	Norway rat	168	95
No Yes	Mus musculus 49_37b (all transcripts)	House mouse	194	100
No Yes	Spermophilus tridecemlineatus 49_1e (all transcripts)	Thirteen-lined ground squirrel	92	46
No Yes	Dipodomys ordii 51_1 (all transcripts)	Ord's kangaroo rat	102	53
No Yes	Cavia porcellus 51_3 (all transcripts)	Domestic guinea pig	128	65
No Yes	Oryctolagus cuniculus 49_1f (all transcripts)	Rabbit	110	57
No Yes	Ochotona princeps 49_1 (all transcripts)	American pika	92	47
No Yes	Tupaia belangeri 49_1d (all transcripts)	Northern tree shrew	88	46
No Yes	Sus scrofa 56_9 (all transcripts)	Pig	112	57
No Yes	Bos taurus 49_3f (all transcripts)	Cattle	145	72
No Yes	Vicugna pacos 51_1 (all transcripts)	Alpaca	84	45
No Yes	Tursiops truncatus 51_1 (all transcripts)	Bottlenosed dolphin	114	57
No Yes	Canis familiaris 49_2g (all transcripts)	Dog	155	80
No Yes	Felis catus 49_1c (all transcripts)	Domestic cat	102	51
No Yes	Equus caballus 49_2 (all transcripts)	Horse	127	63
No Yes	Myotis lucifugus 49_1e (all transcripts)	Little brown bat	89	45
No Yes	Pteropus vampyrus 51_1 (all transcripts)	Large flying fox	108	54
No Yes	Sorex araneus 49_1c (all transcripts)	European shrew	91	46
No Yes	Erinaceus europaeus 49_1c (all transcripts)	Western European hedgehog	94	47
No Yes	Procavia capensis 51_1 (all transcripts)	Cape rock hyrax	102	52
No Yes	Loxodonta africana 49_1d (all transcripts)	African savanna elephant	95	51
No Yes	Echinops telfairi 49_1e (all transcripts)	Small Madagascar hedgehog	109	55
No Yes	Dasypus novemcinctus 49_1f (all transcripts)	Nine-banded armadillo	91	46
No Yes	Macropus eugenii 55_1 (all transcripts)	Tammar wallaby	93	48
No Yes	Monodelphis domestica 49_5d (all transcripts)	Gray short-tailed opossum	194	100
No Yes	Ornithorhynchus anatinus 49_1f (all transcripts)	Platypus	134	75
No Yes	Anolis carolinensis 55_1a (all transcripts)	Green anole	107	55
No Yes	Taeniopygia guttata 57_1c (all transcripts)	Zebra finch	93	51
No Yes	Meleagris gallopavo 57_2 (all transcripts)	Turkey	93	45
No Yes	Gallus gallus 49_2g (all transcripts)	Chicken	127	61
No Yes	Xenopus laevis	African clawed frog	287	143
No Yes	Xenopus tropicalis 49_41i (all transcripts)	Western clawed frog	130	64
No Yes	Danio rerio 49_7c (all transcripts)	Zebrafish	157	81
No Yes	Gasterosteus aculeatus 49_1f (all transcripts)	Three-spined stickleback	163	82
No Yes	Oryzias latipes 49_1e (all transcripts)	Japanese medaka	148	74
No Yes	Tetraodon nigroviridis 49_1k (all transcripts)	Spotted green pufferfish	112	61
No Yes	Takifugu rubripes 49_4i (all transcripts)	Torafugu	199	97
No Yes	Branchiostoma floridae 1.0	Florida lancelet	256	144
No Yes	Ciona savignyi 49_2f (all transcripts)		184	98
No Yes	Ciona intestinalis 49_2i (all transcripts)		137	72
No Yes	Strongylocentrotus purpuratus	Purple sea urchin	319	193
No Yes	Helobdella robusta		68	36
No Yes	Capitella sp. I		133	79
No Yes	Bombyx mori	Domestic silkworm	68	41
No Yes	Nasonia vitripennis	Jewel wasp	73	38
No Yes	Apis mellifera 37.2d (all transcripts) (Not maintained)	Honey bee	98	63
No Yes	Drosophila grimshawi 1.3		89	46
No Yes	Drosophila willistoni 1.3		83	43
No Yes	Drosophila pseudoobscura 2.3		89	46
No Yes	Drosophila persimilis 1.3		92	50
No Yes	Drosophila yakuba 1.3		85	45
No Yes	Drosophila simulans 1.3		79	44
No Yes	Drosophila sechellia 1.3		85	49
No Yes	Drosophila melanogaster Ensembl 49_54 (all transcripts)	Fruit fly	149	78
No Yes	Drosophila erecta 1.3		91	47
No Yes	Drosophila ananassae 1.3		88	46
No Yes	Drosophila virilis 1.2		99	52
No Yes	Drosophila mojavensis 1.3		93	49
No Yes	Aedes aegypti 49_1b (all transcripts)	Yellow fever mosquito	68	36
No Yes	Culex pipiens quinquefasciatus	Southern house mosquito	88	48
No Yes	Anopheles gambiae 49_3j (all transcripts)	African malaria mosquito	63	34
No Yes	Tribolium castaneum 3.0	Red flour beetle	79	41
No Yes	Pediculus humanus corporis (Early assembly)	Human body louse	66	35
No Yes	Acyrthosiphon pisum	Pea aphid	97	51
No Yes	Daphnia pulex	Common water flea	76	43
No Yes	Ixodes scapularis (Preliminary)	Black-legged tick	68	44
No Yes	Lottia gigantea		96	53
No Yes	Pristionchus pacificus		81	45
No Yes	Meloidogyne incognita	Southern root-knot nematode	75	51
No Yes	Meloidogyne hapla		79	42
No Yes	Brugia malayi	Agent of lymphatic filariasis	42	24
No Yes	Caenorhabditis japonica		66	38
No Yes	Caenorhabditis brenneri		59	35
No Yes	Caenorhabditis remanei		101	59
No Yes	Caenorhabditis elegans Ensembl 49_180a (all transcripts)	Nematode	125	67
No Yes	Caenorhabditis briggsae 2		102	54
No Yes	Schistosoma mansoni		69	36
No Yes	Nematostella vectensis 1.0	Starlet sea anemone	94	57
No Yes	Hydra magnipapillata		83	48
No Yes	Trichoplax adhaerens		59	32
No Yes	Proterospongia sp. ATCC 50818		80	47
No Yes	Monosiga brevicollis		61	36
No Yes	Capsaspora owczarzaki ATCC 30864		57	31
No Yes	Malassezia globosa CBS 7966		43	25
No Yes	Ustilago maydis		49	27
No Yes	Puccinia graminis f. sp. tritici CRL 75-36-700-3		56	31
No Yes	Melampsora laricis-populina		48	26
No Yes	Sporobolomyces roseus IAM 13481		53	28
No Yes	Serpula lacrymans var. lacrymans S7.9		63	35
No Yes	Coprinopsis cinerea okayama7 130		85	47
No Yes	Pleurotus ostreatus	Oyster mushroom	69	37
No Yes	Laccaria bicolor S238N-H82		103	57
No Yes	Agaricus bisporus var. bisporus		72	39
No Yes	Schizophyllum commune		63	34
No Yes	Heterobasidion annosum		57	32
No Yes	Phanerochaete chrysosporium RP-78 2.1		63	35
No Yes	Postia placenta		112	61
No Yes	Tremella mesenterica		47	25
No Yes	Cryptococcus neoformans JEC21		56	30
No Yes	Magnaporthe grisea 70-15		71	38
No Yes	Podospora anserina		78	41
No Yes	Sporotrichum thermophile ATCC 42464		63	33
No Yes	Thielavia terrestris NRRL 8126		59	31
No Yes	Chaetomium globosum CBS 148.51		70	39
No Yes	Neurospora tetrasperma		72	39
No Yes	Neurospora discreta FGSC 8579		67	36
No Yes	Neurospora crassa OR74A		70	38
No Yes	Cryphonectria parasitica	Chestnut blight fungus	74	40
No Yes	Fusarium oxysporum f. sp. lycopersici 4286		96	55
No Yes	Nectria haematococca mpVI		106	56
No Yes	Fusarium verticillioides 7600		85	47
No Yes	Fusarium graminearum		93	49
No Yes	Trichoderma atroviride		80	42
No Yes	Trichoderma reesei 1.2		72	38
No Yes	Trichoderma virens Gv29-8		87	46
No Yes	Verticillium dahliae VdLs.17		73	39
No Yes	Verticillium albo-atrum VaMs.102		65	38
No Yes	Botrytis cinerea B05.10		71	41
No Yes	Sclerotinia sclerotiorum		75	43
No Yes	Alternaria brassicicola		64	34
No Yes	Pyrenophora tritici-repentis		70	38
No Yes	Cochliobolus heterostrophus		63	33
No Yes	Stagonospora nodorum		73	39
No Yes	Mycosphaerella fijiensis CIRAD86		66	35
No Yes	Mycosphaerella graminicola IPO323		71	38
No Yes	Ajellomyces dermatitidis SLH14081		67	36
No Yes	Histoplasma capsulatum class NAmI strain WU24		64	35
No Yes	Microsporum gypseum		74	39
No Yes	Arthroderma benhamiae CBS 112371		73	38
No Yes	Microsporum canis CBS 113480		71	37
No Yes	Trichophyton equinum CBS 127.97		72	38
No Yes	Trichophyton verrucosum HKI 0517		72	38
No Yes	Trichophyton tonsurans CBS 112818		73	38
No Yes	Trichophyton rubrum CBS 118892		73	38
No Yes	Paracoccidioides brasiliensis Pb18		60	33
No Yes	Coccidioides posadasii RMSCC 3488		71	37
No Yes	Coccidioides immitis RS		71	37
No Yes	Uncinocarpus reesii 1704		76	39
No Yes	Aspergillus fumigatus Af293		80	43
No Yes	Neosartorya fischeri NRRL 181		87	47
No Yes	Penicillium chrysogenum Wisconsin 54-1255		72	38
No Yes	Penicillium marneffei ATCC 18224		90	46
No Yes	Aspergillus carbonarius ITEM 5010		82	43
No Yes	Aspergillus terreus NIH2624		75	41
No Yes	Aspergillus oryzae RIB40		80	44
No Yes	Aspergillus niger ATCC 1015		56	33
No Yes	Aspergillus flavus NRRL3357		81	44
No Yes	Aspergillus clavatus NRRL 1		68	35
No Yes	Aspergillus nidulans FGSC A4		81	44
No Yes	Tuber melanosporum Vittad	Perigord truffle	71	40
No Yes	Candida dubliniensis CD36		57	29
No Yes	Candida tropicalis MYA-3404		56	29
No Yes	Candida parapsilosis		54	28
No Yes	Candida albicans SC5314		55	28
No Yes	Yarrowia lipolytica CLIB122		57	30
No Yes	Candida lusitaniae ATCC 42720		57	30
No Yes	Vanderwaltozyma polyspora DSM 70294		67	35
No Yes	Candida glabrata CBS138		63	33
No Yes	Kluyveromyces thermotolerans CBS 6340		60	31
No Yes	Lachancea kluyveri		60	31
No Yes	Kluyveromyces waltii		59	31
No Yes	Lodderomyces elongisporus NRRL YB-4239		54	28
No Yes	Ashbya gossypii ATCC 10895		59	31
No Yes	Debaromyces hansenii		57	29
No Yes	Zygosaccharomyces rouxii		58	30
No Yes	Saccharomyces mikatae MIT		73	41
No Yes	Saccharomyces paradoxus MIT		71	38
No Yes	Saccharomyces cerevisiae SGD (SGD)	Baker's yeast	74	38
No Yes	Saccharomyces bayanus MIT		75	42
No Yes	Candida guilliermondii ATCC 6260		70	39
No Yes	Pichia stipitis CBS 6054		67	36
No Yes	Pichia pastoris GS115		59	31
No Yes	Kluyveromyces lactis		60	31
No Yes	Schizosaccharomyces octosporus yFS286		46	25
No Yes	Schizosaccharomyces japonicus yFS275		49	26
No Yes	Schizosaccharomyces pombe	Fission yeast	46	25
No Yes	Allomyces macrogynus ATCC 38327		153	84
No Yes	Rhizopus oryzae RA 99-880		121	65
No Yes	Phycomyces blakesleeanus		143	73
No Yes	Mucor circinelloides		114	59
No Yes	Encephalitozoon intestinalis		17	9
No Yes	Encephalitozoon cuniculi		18	10
No Yes	Spizellomyces punctatus DAOM BR117		54	28
No Yes	Batrachochytrium dendrobatidis JEL423		33	18
No Yes	Dictyostelium discoideum		119	64
No Yes	Dictyostelium purpureum		92	48
No Yes	Entamoeba dispar		163	91
No Yes	Entamoeba invadens		232	137
No Yes	Entamoeba histolytica 1		162	84
No Yes	Arabidopsis lyrata	Lyrate rockcress	105	54
No Yes	Arabidopsis thaliana 9 (all transcripts)	Thale cress	135	71
No Yes	Carica papaya	Papaya	81	46
No Yes	Medicago truncatula	Barrel medic	186	104
No Yes	Glycine max	Soybean	225	120
No Yes	Cucumis sativus	Cucumber	144	77
No Yes	Populus trichocarpa 1.1	Black cottonwood	165	94
No Yes	Vitis vinifera	Wine grape	106	62
No Yes	Brachypodium distachyon		188	102
No Yes	Oryza sativa ssp. japonica 5.0	Japanese rice	208	110
No Yes	Zea mays subsp. mays	Maize	279	167
No Yes	Sorghum bicolor	Sorghum	136	72
No Yes	Selaginella moellendorffii		169	92
No Yes	Physcomitrella patens subsp. patens		158	84
No Yes	Coccomyxa sp. C-169		45	25
No Yes	Chlorella sp. NC64A		48	28
No Yes	Chlorella vulgaris		46	26
No Yes	Volvox carteri f. nagariensis		60	34
No Yes	Chlamydomonas reinhardtii 4.0		47	27
No Yes	Ostreococcus sp. RCC809		37	20
No Yes	Ostreococcus lucimarinus CCE9901		39	21
No Yes	Ostreococcus tauri		38	21
No Yes	Micromonas sp. RCC299		43	24
No Yes	Micromonas pusilla CCMP1545		45	26
No Yes	Cyanidioschyzon merolae		37	21
No Yes	Giardia lamblia		23	13
No Yes	Trypanosoma cruzi strain CL Brener		100	60
No Yes	Trypanosoma brucei		60	32
No Yes	Leishmania mexicana		58	32
No Yes	Leishmania major strain Friedlin		63	34
No Yes	Leishmania infantum JPCM5		64	35
No Yes	Leishmania braziliensis MHOM/BR/75/M2904		53	33
No Yes	Aureococcus anophagefferens		66	38
No Yes	Phytophthora ramorum 1.1	Sudden oak death agent	78	49
No Yes	Phytophthora sojae 1.1		81	49
No Yes	Phytophthora infestans T30-4		79	47
No Yes	Phytophthora capsici		91	57
No Yes	Phaeodactylum tricornutum		54	31
No Yes	Fragilariopsis cylindrus		88	52
No Yes	Thalassiosira pseudonana		54	32
No Yes	Paramecium tetraurelia		139	75
No Yes	Tetrahymena thermophila SB210 1		72	39
No Yes	Babesia bovis T2Bo		31	17
No Yes	Theileria parva		34	18
No Yes	Theileria annulata		35	18
No Yes	Plasmodium falciparum 3D7		38	21
No Yes	Plasmodium vivax SaI-1		37	20
No Yes	Plasmodium knowlesi strain H		36	20
No Yes	Plasmodium yoelii ssp. yoelii 1		37	21
No Yes	Plasmodium chabaudi		41	31
No Yes	Plasmodium berghei ANKA		47	33
No Yes	Cryptosporidium hominis		31	17
No Yes	Cryptosporidium muris		32	17
No Yes	Cryptosporidium parvum Iowa II		32	17
No Yes	Neospora caninum Nc-Liverpool		41	21
No Yes	Neospora caninum		37	19
No Yes	Toxoplasma gondii ME49		39	21
No Yes	Naegleria gruberi		255	143
No Yes	Trichomonas vaginalis		275	161
No Yes	Guillardia theta		4	2
No Yes	Emiliania huxleyi CCMP1516		147	96
No Yes	Candidatus Phytoplasma mali		6	4
No Yes	Aster yellows witches-broom phytoplasma AYWB		7	5
No Yes	Onion yellows phytoplasma OY-M		6	4
No Yes	Acholeplasma laidlawii PG-8A		16	11
No Yes	Mesoplasma florum L1		11	8
No Yes	Ureaplasma parvum ser. 3 ATCC 700970		6	4
No Yes	Ureaplasma urealyticum ser. 10 ATCC 33699		6	4
No Yes	Mycoplasma mycoides ssp. mycoides SC PG1		12	9
No Yes	Mycoplasma capricolum ssp. capricolum ATCC 27343		9	6
No Yes	Mycoplasma crocodyli MP145		9	6
No Yes	Mycoplasma conjunctivae		8	5
No Yes	Mycoplasma penetrans HF-2		11	7
No Yes	Mycoplasma mobile 163K		11	7
No Yes	Mycoplasma arthritidis 158L3-1		6	4
No Yes	Mycoplasma agalactiae PG2		10	6
No Yes	Mycoplasma synoviae 53		9	6
No Yes	Mycoplasma pulmonis UAB CTIP		11	7
No Yes	Mycoplasma pneumoniae M129		8	5
No Yes	Mycoplasma hyopneumoniae 232		9	6
No Yes	Mycoplasma hominis		6	4
No Yes	Mycoplasma genitalium G37		8	5
No Yes	Mycoplasma gallisepticum R		9	5
No Yes	Aminobacterium colombiense DSM 12261		25	15
No Yes	Thermanaerovibrio acidaminovorans DSM 6589		36	21
No Yes	Brachyspira hyodysenteriae WA1		25	14
No Yes	Leptospira borgpetersenii ser. Hardjo-bovis L550		21	13
No Yes	Leptospira interrogans ser. Lai 56601		20	12
No Yes	Leptospira biflexa ser. Patoc Patoc 1 (Paris)		19	11
No Yes	Treponema pallidum ssp. pallidum Nichols		17	9
No Yes	Treponema denticola ATCC 35405		21	13
No Yes	Borrelia garinii PBi		21	12
No Yes	Borrelia afzelii PKo		21	12
No Yes	Borrelia burgdorferi B31		21	12
No Yes	Borrelia recurrentis A1		18	10
No Yes	Borrelia duttonii Ly		21	12
No Yes	Borrelia turicatae 91E135		21	12
No Yes	Borrelia hermsii DAH		21	12
No Yes	Rhodopirellula baltica SH 1		38	23
No Yes	Pirellula staleyi DSM 6068		36	23
No Yes	Gardnerella vaginalis 409-05		11	7
No Yes	Bifidobacterium longum NCC2705		29	20
No Yes	Bifidobacterium animalis ssp. lactis AD011		20	14
No Yes	Bifidobacterium dentium Bd1		28	20
No Yes	Bifidobacterium adolescentis ATCC 15703		24	16
No Yes	Kineococcus radiotolerans SRS30216		38	26
No Yes	Catenulispora acidiphila DSM 44928		72	53
No Yes	Stackebrandtia nassauensis DSM 44728		61	37
No Yes	Acidothermus cellulolyticus 11B		29	18
No Yes	Nakamurella multipartita DSM 44233		37	24
No Yes	Geodermatophilus obscurus DSM 43160		31	19
No Yes	Frankia sp. CcI3		31	19
No Yes	Frankia alni ACN14a		40	23
No Yes	Thermobifida fusca YX		25	16
No Yes	Thermomonospora curvata DSM 43183		36	21
No Yes	Streptosporangium roseum DSM 43021		85	59
No Yes	Streptomyces griseus ssp. griseus NBRC 13350		50	33
No Yes	Streptomyces avermitilis MA-4680		63	44
No Yes	Streptomyces scabiei 87.22		61	43
No Yes	Streptomyces coelicolor A3(2)		66	48
No Yes	Actinosynnema mirum DSM 43827		57	40
No Yes	Saccharomonospora viridis DSM 43017		46	30
No Yes	Saccharopolyspora erythraea NRRL 2338		65	40
No Yes	Kribbella flavida DSM 17836		64	47
No Yes	Nocardioides sp. JS614		46	30
No Yes	Propionibacterium acnes KPA171202		28	18
No Yes	Salinispora arenicola CNS-205		34	22
No Yes	Salinispora tropica CNB-440		34	22
No Yes	Gordonia bronchialis DSM 43247		30	20
No Yes	Rhodococcus jostii RHA1		45	32
No Yes	Rhodococcus opacus B4		42	31
No Yes	Rhodococcus erythropolis PR4		31	22
No Yes	Nocardia farcinica IFM 10152		31	20
No Yes	Mycobacterium abscessus		22	14
No Yes	Mycobacterium sp. MCS		36	23
No Yes	Mycobacterium avium ssp. paratuberculosis K-10		26	17
No Yes	Mycobacterium vanbaalenii PYR-1		31	21
No Yes	Mycobacterium tuberculosis H37Rv		22	14
No Yes	Mycobacterium bovis AF2122/97		21	14
No Yes	Mycobacterium ulcerans Agy99		25	16
No Yes	Mycobacterium gilvum PYR-GCK		27	18
No Yes	Mycobacterium marinum M		32	21
No Yes	Mycobacterium smegmatis MC2 155		49	33
No Yes	Mycobacterium leprae TN		13	8
No Yes	Corynebacterium aurimucosum		16	10
No Yes	Corynebacterium kroppenstedtii DSM 44385		16	10
No Yes	Corynebacterium efficiens YS-314		20	12
No Yes	Corynebacterium urealyticum DSM 7109		15	8
No Yes	Corynebacterium jeikeium K411		16	9
No Yes	Corynebacterium glutamicum ATCC 13032 Kitasato		24	15
No Yes	Corynebacterium diphtheriae NCTC 13129		17	11
No Yes	Tropheryma whipplei Twist		5	4
No Yes	Sanguibacter keddieii DSM 10542		36	25
No Yes	Kytococcus sedentarius DSM 20547		20	12
No Yes	Beutenbergia cavernae DSM 12333		42	30
No Yes	Leifsonia xyli ssp. xyli CTCB07		19	14
No Yes	Clavibacter michiganensis ssp. michiganensis NCPPB 382		20	14
No Yes	Jonesia denitrificans DSM 20603		27	18
No Yes	Brachybacterium faecium DSM 4810		45	30
No Yes	Xylanimonas cellulosilytica DSM 15894		31	21
No Yes	Kocuria rhizophila DC2201		18	11
No Yes	Rothia mucilaginosa DY-18		14	8
No Yes	Arthrobacter sp. FB24		35	23
No Yes	Arthrobacter chlorophenolicus A6		32	21
No Yes	Arthrobacter aurescens TC1		37	25
No Yes	Renibacterium salmoninarum ATCC 33209		31	22
No Yes	Micrococcus luteus NCTC 2665		16	9
No Yes	Cryptobacterium curtum DSM 15641		19	11
No Yes	Eggerthella lenta DSM 2243		28	16
No Yes	Slackia heliotrinireducens DSM 20476		20	12
No Yes	Atopobium parvulum DSM 20469		18	10
No Yes	Conexibacter woesei DSM 14684		47	32
No Yes	Rubrobacter xylanophilus DSM 9941		33	20
No Yes	Acidimicrobium ferrooxidans DSM 10331		16	9
No Yes	Denitrovibrio acetiphilus DSM 12809		29	17
No Yes	Deferribacter desulfuricans SSM1		27	16
No Yes	Kosmotoga olearia TBF 19.5.1		37	23
No Yes	Petrotoga mobilis SJ95		43	26
No Yes	Fervidobacterium nodosum Rt17-B1		28	16
No Yes	Thermosipho melanesiensis BI429		30	17
No Yes	Thermosipho africanus TCF52B		30	17
No Yes	Thermotoga lettingae TMO		62	37
No Yes	Thermotoga sp. RQ2		44	26
No Yes	Thermotoga naphthophila RKU-10		45	27
No Yes	Thermotoga petrophila RKU-1		45	27
No Yes	Thermotoga neapolitana DSM 4359		49	30
No Yes	Thermotoga maritima MSB8		48	28
No Yes	Dehalococcoides sp. CBDB1		13	9
No Yes	Dehalococcoides ethenogenes 195		14	9
No Yes	Thermomicrobium roseum DSM 5159		16	11
No Yes	Sphaerobacter thermophilus DSM 20745		25	16
No Yes	Herpetosiphon aurantiacus ATCC 23779		33	21
No Yes	Roseiflexus sp. RS-1		37	23
No Yes	Roseiflexus castenholzii DSM 13941		35	22
No Yes	Chloroflexus sp. Y-400-fl		27	17
No Yes	Chloroflexus aggregans DSM 9485		27	17
No Yes	Chloroflexus aurantiacus J-10-fl		25	16
No Yes	Sulfurihydrogenibium sp. YO3AOP1		14	9
No Yes	Sulfurihydrogenibium azorense Az-Fu1		13	8
No Yes	Persephonella marina EX-H1		14	9
No Yes	Hydrogenobaculum sp. Y04AAS1		13	9
No Yes	Thermocrinis albus DSM 14484		16	11
No Yes	Aquifex aeolicus VF5		18	12
No Yes	Hydrogenobacter thermophilus TK-6		18	12
No Yes	Gemmatimonas aurantiaca T-27		24	16
No Yes	Fibrobacter succinogenes ssp. succinogenes S85		22	14
No Yes	Candidatus Koribacter versatilis Ellin345		34	23
No Yes	Candidatus Solibacter usitatus Ellin6076		51	33
No Yes	Acidobacterium capsulatum ATCC 51196		32	20
No Yes	Elusimicrobium minutum Pei191		20	13
No Yes	uncultured Termite group 1 bacterium phylotype Rs-D17		15	8
No Yes	Pelodictyon phaeoclathratiforme BU-1		26	15
No Yes	Pelodictyon luteolum DSM 273		21	12
No Yes	Chlorobium chlorochromatii CaD3		16	9
No Yes	Chlorobium phaeobacteroides DSM 266		22	13
No Yes	Chlorobium phaeovibrioides DSM 265		16	9
No Yes	Chlorobium limicola DSM 245		26	15
No Yes	Chlorobaculum parvum NCIB 8327		25	14
No Yes	Chlorobium tepidum TLS		24	14
No Yes	Chloroherpeton thalassium ATCC 35110		26	16
No Yes	Prosthecochloris aestuarii DSM 271		28	16
No Yes	Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2		16	9
No Yes	Prevotella ruminicola 23		30	19
No Yes	Parabacteroides distasonis ATCC 8503		33	22
No Yes	Porphyromonas gingivalis W83		16	9
No Yes	Bacteroides vulgatus ATCC 8482		33	18
No Yes	Bacteroides thetaiotaomicron VPI-5482		40	23
No Yes	Bacteroides fragilis NCTC 9343		32	17
No Yes	Candidatus Amoebophilus asiaticus 5a2		12	7
No Yes	Salinibacter ruber DSM 13855		27	15
No Yes	Rhodothermus marinus DSM 4252		28	17
No Yes	Chitinophaga pinensis DSM 2588		37	22
No Yes	Dyadobacter fermentans DSM 18053		45	27
No Yes	Cytophaga hutchinsonii ATCC 33406		21	12
No Yes	Spirosoma linguale DSM 74		45	29
No Yes	Pedobacter heparinus DSM 2366		48	27
No Yes	Candidatus Sulcia muelleri GWSS		2	1
No Yes	Zunongwangia profunda SM-A87		32	19
No Yes	Gramella forsetii KT0803		22	13
No Yes	Robiginitalea biformata HTCC2501		27	15
No Yes	Flavobacteriaceae bacterium 3519-10		20	12
No Yes	Capnocytophaga ochracea DSM 7271		18	10
No Yes	Flavobacterium psychrophilum JIP02/86		20	11
No Yes	Flavobacterium johnsoniae UW101		27	15
No Yes	Blattabacterium sp. Bge		12	7
No Yes	Dictyoglomus turgidum DSM 6724		40	26
No Yes	Dictyoglomus thermophilum H-6-12		40	26
No Yes	Candidatus Protochlamydia amoebophila UWE25		15	10
No Yes	Chlamydophila pneumoniae TW-183		6	4
No Yes	Chlamydophila caviae GPIC		6	4
No Yes	Chlamydophila felis Fe/C-56		6	4
No Yes	Chlamydophila abortus S26/3		6	4
No Yes	Chlamydia muridarum Nigg		6	4
No Yes	Chlamydia trachomatis D/UW-3/CX		6	4
No Yes	Coraliomargarita akajimensis DSM 45221		24	14
No Yes	Opitutus terrae PB90-1		32	19
No Yes	Methylacidiphilum infernorum V4		21	12
No Yes	Akkermansia muciniphila ATCC BAA-835		19	13
No Yes	Thermodesulfovibrio yellowstonii DSM 11347		20	12
No Yes	Streptobacillus moniliformis DSM 12112		20	13
No Yes	Sebaldella termitidis ATCC 33386		51	32
No Yes	Leptotrichia buccalis DSM 1135		22	13
No Yes	Fusobacterium nucleatum ssp. nucleatum ATCC 25586		28	18
No Yes	Thermobaculum terrenum ATCC BAA-798		39	25
No Yes	Deinococcus deserti VCD115		24	15
No Yes	Deinococcus geothermalis DSM 11300		18	12
No Yes	Deinococcus radiodurans R1		21	13
No Yes	Meiothermus ruber DSM 1279		33	21
No Yes	Thermus thermophilus HB27 (First sequenced)		16	10
No Yes	Natranaerobius thermophilus JW/NM-WN-LF		41	25
No Yes	Symbiobacterium thermophilum IAM 14863		40	24
No Yes	Anaerococcus prevotii DSM 20548		26	16
No Yes	Finegoldia magna ATCC 29328		18	10
No Yes	Clostridiales genomosp. BVAB3 UPII9-5		19	12
No Yes	Anaerocellum thermophilum DSM 6725		34	21
No Yes	Candidatus Desulforudis audaxviator MP104C		22	14
No Yes	Pelotomaculum thermopropionicum SI		27	17
No Yes	Desulfitobacterium hafniense Y51		49	33
No Yes	Desulfotomaculum reducens MI-1		46	28
No Yes	Desulfotomaculum acetoxidans DSM 771		34	21
No Yes	Eubacterium rectale ATCC 33656		29	18
No Yes	Eubacterium eligens ATCC 27750		23	14
No Yes	Syntrophomonas wolfei ssp. wolfei Goettingen		36	23
No Yes	Heliobacterium modesticaldum Ice1		36	21
No Yes	Alkaliphilus oremlandii OhILAs		34	20
No Yes	Alkaliphilus metalliredigens QYMF		52	30
No Yes	Clostridium phytofermentans ISDg		41	26
No Yes	Clostridium novyi NT		36	21
No Yes	Clostridium kluyveri DSM 555		46	26
No Yes	Clostridium cellulolyticum H10		38	23
No Yes	Clostridium beijerinckii NCIMB 8052		55	34
No Yes	Clostridium thermocellum ATCC 27405		32	19
No Yes	Clostridium tetani E88		32	18
No Yes	Clostridium perfringens 13		39	22
No Yes	Clostridium difficile 630		47	28
No Yes	Clostridium botulinum A ATCC 3502		37	23
No Yes	Clostridium acetobutylicum ATCC 824		46	27
No Yes	Veillonella parvula DSM 2008		22	13
No Yes	Acidaminococcus fermentans DSM 20731		21	13
No Yes	Caldicellulosiruptor saccharolyticus DSM 8903		33	21
No Yes	Coprothermobacter proteolyticus DSM 5265		20	12
No Yes	Carboxydothermus hydrogenoformans Z-2901		35	24
No Yes	Moorella thermoacetica ATCC 39073		37	24
No Yes	Ammonifex degensii KC4		21	13
No Yes	Thermoanaerobacter pseudethanolicus ATCC 33223		49	30
No Yes	Thermoanaerobacter sp. X514		58	35
No Yes	Thermoanaerobacter tengcongensis MB4		48	30
No Yes	Thermoanaerobacter italicus Ab9		47	29
No Yes	Halothermothrix orenii H 168		44	27
No Yes	Enterococcus faecalis V583		28	17
No Yes	Oenococcus oeni PSU-1		20	12
No Yes	Leuconostoc citreum KM20		31	19
No Yes	Leuconostoc mesenteroides ssp. mesenteroides ATCC 8293		29	17
No Yes	Lactobacillus casei ATCC 334		29	16
No Yes	Lactobacillus crispatus ST1		26	16
No Yes	Lactobacillus rhamnosus GG		41	24
No Yes	Lactobacillus johnsonii NCC 533		27	16
No Yes	Lactobacillus salivarius UCC118		21	12
No Yes	Lactobacillus fermentum IFO 3956		29	17
No Yes	Lactobacillus sakei ssp. sakei 23K		28	17
No Yes	Lactobacillus reuteri DSM 20016		33	19
No Yes	Lactobacillus gasseri ATCC 33323		24	14
No Yes	Lactobacillus plantarum WCFS1		45	27
No Yes	Lactobacillus helveticus DPC 4571		19	11
No Yes	Lactobacillus delbrueckii ssp. bulgaricus ATCC 11842		14	8
No Yes	Lactobacillus brevis ATCC 367		45	26
No Yes	Lactobacillus acidophilus NCFM		33	19
No Yes	Pediococcus pentosaceus ATCC 25745		28	18
No Yes	Lactococcus lactis ssp. lactis Il1403		22	13
No Yes	Streptococcus gallolyticus UCN34		14	9
No Yes	Streptococcus equi ssp. zooepidemicus MGCS10565		16	11
No Yes	Streptococcus dysgalactiae ssp. equisimilis GGS_124		15	10
No Yes	Streptococcus mitis B6		18	12
No Yes	Streptococcus uberis 0140J		19	12
No Yes	Streptococcus pyogenes M1 GAS		15	10
No Yes	Streptococcus pneumoniae TIGR4 (Virulent)		20	14
No Yes	Streptococcus agalactiae NEM316		16	10
No Yes	Streptococcus mutans UA159		13	8
No Yes	Streptococcus thermophilus LMG 18311 (Older strain)		14	10
No Yes	Streptococcus suis 05ZYH33		17	12
No Yes	Streptococcus sanguinis SK36		21	13
No Yes	Streptococcus gordonii Challis subCH1		15	10
No Yes	Exiguobacterium sp. AT1b		26	15
No Yes	Exiguobacterium sibiricum 255-15		29	17
No Yes	Bacillus tusciae DSM 2912		20	13
No Yes	Alicyclobacillus acidocaldarius ssp. acidocaldarius DSM 446		34	20
No Yes	Brevibacillus brevis NBRC 100599		37	23
No Yes	Paenibacillus sp. JDR-2		55	35
No Yes	Listeria welshimeri ser. 6b SLCC5334		43	26
No Yes	Listeria innocua Clip11262		43	27
No Yes	Listeria seeligeri ser. 1/2b SLCC3954		46	27
No Yes	Listeria monocytogenes EGD-e		47	29
No Yes	Lysinibacillus sphaericus C3-41		34	19
No Yes	Oceanobacillus iheyensis HTE831		42	25
No Yes	Anoxybacillus flavithermus WK1		27	15
No Yes	Geobacillus sp. WCH70		27	16
No Yes	Geobacillus thermodenitrificans NG80-2		33	20
No Yes	Geobacillus kaustophilus HTA426		32	19
No Yes	Bacillus subtilis ssp. subtilis 168		34	19
No Yes	Bacillus licheniformis ATCC 14580		36	21
No Yes	Bacillus amyloliquefaciens FZB42		32	18
No Yes	Bacillus halodurans C-125		39	23
No Yes	Bacillus weihenstephanensis KBAB4		40	23
No Yes	Bacillus thuringiensis ser. konkukian 97-27		38	23
No Yes	Bacillus cereus ATCC 14579		36	21
No Yes	Bacillus anthracis Ames Ancestor		36	22
No Yes	Bacillus pseudofirmus OF4		27	15
No Yes	Bacillus clausii KSM-K16		41	25
No Yes	Bacillus pumilus SAFR-032		33	20
No Yes	Bacillus megaterium QM B1551		34	19
No Yes	Macrococcus caseolyticus JCSC5402		17	10
No Yes	Staphylococcus saprophyticus ssp. saprophyticus ATCC 15305		25	15
No Yes	Staphylococcus lugdunensis HKU09-01		22	13
No Yes	Staphylococcus haemolyticus JCSC1435		24	14
No Yes	Staphylococcus epidermidis RP62A		22	13
No Yes	Staphylococcus carnosus ssp. carnosus TM300		24	14
No Yes	Staphylococcus aureus ssp. aureus NCTC 8325		18	11
No Yes	Nautilia profundicola AmH		15	9
No Yes	Sulfurospirillum deleyianum DSM 6946		19	11
No Yes	Arcobacter butzleri RM4018		20	11
No Yes	Campylobacter hominis ATCC BAA-381		16	9
No Yes	Campylobacter lari RM2100		16	9
No Yes	Campylobacter curvus 525.92		18	11
No Yes	Campylobacter concisus 13826		17	10
No Yes	Campylobacter jejuni ssp. jejuni NCTC 11168		16	9
No Yes	Campylobacter fetus ssp. fetus 82-40		16	9
No Yes	Sulfurimonas denitrificans DSM 1251		18	11
No Yes	Wolinella succinogenes DSM 1740		18	11
No Yes	Helicobacter hepaticus ATCC 51449		17	10
No Yes	Helicobacter mustelae 12198		16	9
No Yes	Helicobacter acinonychis Sheeba		16	10
No Yes	Helicobacter pylori 26695		15	9
No Yes	Nitratiruptor sp. SB155-2		15	9
No Yes	Sulfurovum sp. NBC37-1		23	14
No Yes	Bdellovibrio bacteriovorus HD100		27	15
No Yes	Syntrophus aciditrophicus SB		26	15
No Yes	Syntrophobacter fumaroxidans MPOB		34	21
No Yes	Desulfotalea psychrophila LSv54		21	13
No Yes	Desulfatibacillum alkenivorans AK-01		53	35
No Yes	Desulfobacterium autotrophicum HRM2		37	22
No Yes	Desulfococcus oleovorans Hxd3		33	22
No Yes	Desulfohalobium retbaense DSM 5692		20	12
No Yes	Desulfomicrobium baculatum DSM 4028		25	15
No Yes	Lawsonia intracellularis PHE/MN1-00		17	11
No Yes	Desulfovibrio magneticus RS-1		26	17
No Yes	Desulfovibrio vulgaris Hildenborough		24	14
No Yes	Desulfovibrio salexigens DSM 2638		29	19
No Yes	Desulfovibrio desulfuricans ssp. desulfuricans G20		26	16
No Yes	Pelobacter propionicus DSM 2379		28	17
No Yes	Pelobacter carbinolicus DSM 2380		28	17
No Yes	Geobacter uraniireducens Rf4		38	24
No Yes	Geobacter sp. FRC-32		28	17
No Yes	Geobacter lovleyi SZ		32	21
No Yes	Geobacter bemidjiensis Bem		37	23
No Yes	Geobacter sulfurreducens PCA		33	21
No Yes	Geobacter metallireducens GS-15		34	21
No Yes	Haliangium ochraceum DSM 14365		54	32
No Yes	Sorangium cellulosum So ce 56		50	30
No Yes	Anaeromyxobacter sp. Fw109-5		52	28
No Yes	Anaeromyxobacter dehalogenans 2CP-C		53	28
No Yes	Myxococcus xanthus DK 1622		54	30
No Yes	Magnetococcus sp. MC-1		21	14
No Yes	Sideroxydans lithotrophicus ES-1		24	15
No Yes	Aromatoleum aromaticum EbN1		36	22
No Yes	Dechloromonas aromatica RCB		32	18
No Yes	Thauera sp. MZ1T		32	19
No Yes	Laribacter hongkongensis HLHK9		21	12
No Yes	Chromobacterium violaceum ATCC 12472		33	19
No Yes	Neisseria meningitidis Z2491		19	12
No Yes	Neisseria gonorrhoeae FA 1090		20	12
No Yes	Methylotenera mobilis JLW8		21	13
No Yes	Methylovorus sp. SIP3-4		22	13
No Yes	Methylobacillus flagellatus KT		25	15
No Yes	Thiobacillus denitrificans ATCC 25259		25	15
No Yes	Candidatus Accumulibacter phosphatis clade IIA UW-1		33	19
No Yes	Methylibium petroleiphilum PM1		24	14
No Yes	Leptothrix cholodnii SP-6		46	27
No Yes	Ralstonia eutropha JMP134		35	21
No Yes	Cupriavidus taiwanensis		31	18
No Yes	Ralstonia metallidurans CH34		28	16
No Yes	Ralstonia pickettii 12J		29	17
No Yes	Ralstonia solanacearum GMI1000		25	14
No Yes	Polynucleobacter necessarius ssp. asymbioticus QLW-P1DMWA-1		16	9
No Yes	Burkholderia phytofirmans PsJN		50	29
No Yes	Burkholderia phymatum STM815		43	25
No Yes	Burkholderia thailandensis E264		44	25
No Yes	Burkholderia pseudomallei K96243		43	25
No Yes	Burkholderia mallei ATCC 23344		35	20
No Yes	Burkholderia sp. 383		43	24
No Yes	Burkholderia ambifaria AMMD		43	25
No Yes	Burkholderia cenocepacia AU 1054		40	23
No Yes	Burkholderia multivorans ATCC 17616		49	28
No Yes	Burkholderia vietnamiensis G4		49	28
No Yes	Burkholderia xenovorans LB400		57	34
No Yes	Burkholderia glumae BGR1		40	24
No Yes	Verminephrobacter eiseniae EF01-2		43	25
No Yes	Delftia acidovorans SPH-1		37	20
No Yes	Polaromonas sp. JS666		27	16
No Yes	Polaromonas naphthalenivorans CJ2		33	19
No Yes	Variovorax paradoxus S110		38	23
No Yes	Rhodoferax ferrireducens T118		32	19
No Yes	Diaphorobacter sp. TPSY		29	17
No Yes	Acidovorax sp. JS42		31	18
No Yes	Acidovorax citrulli AAC00-1		31	18
No Yes	Comamonas sp. CNB-1		29	16
No Yes	Herminiimonas arsenicoxydans		26	15
No Yes	Janthinobacterium sp. Marseille		24	13
No Yes	Bordetella petrii DSM 12804		24	14
No Yes	Bordetella avium 197N		24	14
No Yes	Bordetella pertussis Tohama I		21	12
No Yes	Bordetella parapertussis 12822		20	12
No Yes	Bordetella bronchiseptica RB50		22	13
No Yes	Nitrosospira multiformis ATCC 25196		19	12
No Yes	Nitrosomonas eutropha C91		23	13
No Yes	Nitrosomonas europaea ATCC 19718		19	11
No Yes	Caulobacter sp. K31		33	22
No Yes	Caulobacter crescentus CB15		26	17
No Yes	Caulobacter segnis ATCC 21756		20	13
No Yes	Phenylobacterium zucineum HLK1		25	16
No Yes	Erythrobacter litoralis HTCC2594		19	12
No Yes	Sphingopyxis alaskensis RB2256		23	14
No Yes	Novosphingobium aromaticivorans DSM 12444		26	16
No Yes	Sphingobium japonicum UT26S		22	14
No Yes	Sphingomonas wittichii RW1		34	23
No Yes	Zymomonas mobilis ssp. mobilis ZM4		19	12
No Yes	Maricaulis maris MCS10		22	14
No Yes	Hirschia baltica ATCC 49814		23	15
No Yes	Hyphomonas neptunium ATCC 15444		22	14
No Yes	Dinoroseobacter shibae DFL 12		34	20
No Yes	Jannaschia sp. CCS1		36	23
No Yes	Ruegeria sp. TM1040		23	14
No Yes	Ruegeria pomeroyi DSS-3		28	17
No Yes	Roseobacter denitrificans OCh 114		39	24
No Yes	Rhodobacter sphaeroides 2.4.1		37	24
No Yes	Rhodobacter capsulatus SB1003		41	25
No Yes	Paracoccus denitrificans PD1222		37	22
No Yes	Magnetospirillum magneticum AMB-1		30	19
No Yes	Rhodospirillum centenum SW		23	14
No Yes	Rhodospirillum rubrum ATCC 11170		40	23
No Yes	Azospirillum sp. B510		21	13
No Yes	Granulibacter bethesdensis CGDNIH1		19	13
No Yes	Gluconacetobacter diazotrophicus PAl 5		36	22
No Yes	Gluconobacter oxydans 621H		30	19
No Yes	Acetobacter pasteurianus IFO 3283-01		24	14
No Yes	alpha proteobacterium IMCC1322		24	16
No Yes	Candidatus Pelagibacter ubique HTCC1062		13	9
No Yes	Neorickettsia sennetsu Miyayama		8	5
No Yes	Neorickettsia risticii Illinois		8	5
No Yes	Ehrlichia chaffeensis Arkansas		10	6
No Yes	Ehrlichia canis Jake		10	6
No Yes	Ehrlichia ruminantium Welgevonden		10	6
No Yes	Anaplasma phagocytophilum HZ		14	8
No Yes	Anaplasma marginale St. Maries		13	8
No Yes	Anaplasma centrale Israel		13	8
No Yes	Orientia tsutsugamushi Boryong		12	7
No Yes	Rickettsia bellii RML369-C		14	8
No Yes	Rickettsia canadensis McKiel		12	7
No Yes	Rickettsia typhi Wilmington		14	8
No Yes	Rickettsia prowazekii Madrid E		14	8
No Yes	Rickettsia peacockii Rustic		12	7
No Yes	Rickettsia felis URRWXCal2		14	8
No Yes	Rickettsia massiliae MTU5		12	7
No Yes	Rickettsia africae ESF-5		12	7
No Yes	Rickettsia akari Hartford		15	8
No Yes	Rickettsia rickettsii Sheila Smith		12	7
No Yes	Rickettsia conorii Malish 7		15	10
No Yes	Wolbachia endosymbiont of Culex_quinquefasciatus Pel		10	6
No Yes	Wolbachia endosymbiont of Drosophila melanogaster (Genus only)		10	6
No Yes	Wolbachia endosymbiont TRS of Brugia malayi		10	6
No Yes	Wolbachia sp. wRi		10	6
No Yes	Xanthobacter autotrophicus Py2		20	13
No Yes	Azorhizobium caulinodans ORS 571		24	15
No Yes	Methylobacterium chloromethanicum CM4		25	16
No Yes	Methylobacterium extorquens PA1		23	15
No Yes	Methylobacterium sp. 4-46		26	18
No Yes	Methylobacterium populi BJ001		21	14
No Yes	Methylobacterium nodulans ORS 2060		27	18
No Yes	Methylobacterium radiotolerans JCM 2831		23	15
No Yes	Candidatus Hodgkinia cicadicola Dsem		2	1
No Yes	Ochrobactrum anthropi ATCC 49188		40	23
No Yes	Brucella microti CCM 4915		29	17
No Yes	Brucella canis ATCC 23365		29	17
No Yes	Brucella suis 1330		31	18
No Yes	Brucella melitensis bv. 1 16M		32	19
No Yes	Brucella ovis ATCC 25840		29	17
No Yes	Brucella abortus bv. 1 9-941		29	17
No Yes	Sinorhizobium medicae WSM419		47	29
No Yes	Sinorhizobium meliloti 1021		41	26
No Yes	Rhizobium etli CFN 42		36	23
No Yes	Rhizobium sp. NGR234		35	22
No Yes	Rhizobium leguminosarum bv. viciae 3841		38	25
No Yes	Agrobacterium vitis S4		39	25
No Yes	Agrobacterium radiobacter K84		62	40
No Yes	Agrobacterium tumefaciens C58		43	28
No Yes	Candidatus Liberibacter asiaticus psy62		7	5
No Yes	Chelativorans sp. BNC1		30	20
No Yes	Parvibaculum lavamentivorans DS-1		22	13
No Yes	Mesorhizobium loti MAFF303099		44	29
No Yes	Methylocella silvestris BL2		23	16
No Yes	Beijerinckia indica ssp. indica ATCC 9039		28	18
No Yes	Oligotropha carboxidovorans OM5		17	11
No Yes	Rhodopseudomonas palustris CGA009		19	13
No Yes	Nitrobacter winogradskyi Nb-255		18	12
No Yes	Nitrobacter hamburgensis X14		24	15
No Yes	Bradyrhizobium sp. ORS278		36	23
No Yes	Bradyrhizobium japonicum USDA 110		33	22
No Yes	Bartonella tribocorum CIP 105476		10	6
No Yes	Bartonella henselae Houston-1		10	6
No Yes	Bartonella grahamii as4aup		10	6
No Yes	Bartonella quintana Toulouse		8	5
No Yes	Bartonella bacilliformis KC583		6	4
No Yes	Acidithiobacillus ferrooxidans ATCC 23270		23	13
No Yes	Mannheimia succiniciproducens MBEL55E		32	18
No Yes	Aggregatibacter aphrophilus NJ8700		21	13
No Yes	Aggregatibacter actinomycetemcomitans D11S-1		27	16
No Yes	Haemophilus somnus 129PT		31	18
No Yes	Pasteurella multocida ssp. multocida Pm70		30	18
No Yes	Haemophilus parasuis SH0165		26	15
No Yes	Haemophilus ducreyi 35000HP		17	9
No Yes	Haemophilus influenzae Rd KW20		26	15
No Yes	Actinobacillus succinogenes 130Z		32	18
No Yes	Actinobacillus pleuropneumoniae L20		28	16
No Yes	Tolumonas auensis DSM 9187		56	33
No Yes	Aeromonas salmonicida ssp. salmonicida A449		44	27
No Yes	Aeromonas hydrophila ssp. hydrophila ATCC 7966		40	25
No Yes	Aliivibrio salmonicida LFI1238		36	22
No Yes	Vibrio fischeri ES114		39	23
No Yes	Vibrio parahaemolyticus RIMD 2210633		38	22
No Yes	Vibrio harveyi ATCC BAA-1116		36	21
No Yes	Vibrio sp. Ex25		37	22
No Yes	Vibrio splendidus LGP32		39	23
No Yes	Vibrio vulnificus YJ016 (Good annotation)		40	24
No Yes	Vibrio cholerae O1 biov. El Tor N16961		40	24
No Yes	Photobacterium profundum SS9		49	30
No Yes	Psychromonas ingrahamii 37		44	26
No Yes	Idiomarina loihiensis L2TR		19	11
No Yes	Shewanella piezotolerans WP3		30	18
No Yes	Shewanella loihica PV-4		33	19
No Yes	Shewanella halifaxensis HAW-EB4		38	21
No Yes	Shewanella sediminis HAW-EB3		34	20
No Yes	Shewanella denitrificans OS217		28	16
No Yes	Shewanella pealeana ATCC 700345		34	20
No Yes	Shewanella oneidensis MR-1		31	18
No Yes	Shewanella baltica OS155		33	20
No Yes	Shewanella woodyi ATCC 51908		39	24
No Yes	Shewanella sp. MR-7		34	20
No Yes	Shewanella amazonensis SB2B		37	22
No Yes	Shewanella violacea DSS12		32	19
No Yes	Shewanella frigidimarina NCIMB 400		26	15
No Yes	Shewanella putrefaciens CN-32		33	19
No Yes	Colwellia psychrerythraea 34H		33	20
No Yes	Pseudoalteromonas atlantica T6c		40	23
No Yes	Pseudoalteromonas haloplanktis TAC125		29	17
No Yes	Teredinibacter turnerae T7901		28	18
No Yes	Saccharophagus degradans 2-40		29	18
No Yes	Marinobacter aquaeolei VT8		27	17
No Yes	Alteromonas macleodii Deep ecotype		32	19
No Yes	Hahella chejuensis KCTC 2396		42	25
No Yes	Alcanivorax borkumensis SK2		23	13
No Yes	Marinomonas sp. MWYL1		38	21
No Yes	Chromohalobacter salexigens DSM 3043		22	13
No Yes	Methylococcus capsulatus Bath		30	19
No Yes	Dichelobacter nodosus VCS1703A		19	12
No Yes	Stenotrophomonas maltophilia R551-3		26	18
No Yes	Xylella fastidiosa 9a5c		21	13
No Yes	Xanthomonas axonopodis pv. citri 306		31	20
No Yes	Xanthomonas albilineans		27	17
No Yes	Xanthomonas oryzae pv. oryzae KACC10331		25	16
No Yes	Xanthomonas campestris pv. campestris ATCC 33913 (Completed 2001)		29	19
No Yes	Halothiobacillus neapolitanus c2		21	13
No Yes	Alkalilimnicola ehrlichii MLHE-1		23	14
No Yes	Thioalkalivibrio sp. HL-EbGR7		25	16
No Yes	Halorhodospira halophila SL1		29	17
No Yes	Allochromatium vinosum DSM 180		23	13
No Yes	Nitrosococcus halophilus Nc4		31	18
No Yes	Nitrosococcus oceani ATCC 19707		27	16
No Yes	Coxiella burnetii RSA 493		14	8
No Yes	Legionella longbeachae NSW150		20	12
No Yes	Legionella pneumophila ssp. pneumophila Philadelphia 1		20	12
No Yes	Kangiella koreensis DSM 16069		24	13
No Yes	Baumannia cicadellinicola Hc		9	5
No Yes	Candidatus Carsonella ruddii PV		2	1
No Yes	Candidatus Vesicomyosocius okutanii HA		11	6
No Yes	Candidatus Ruthia magnifica Cm		14	8
No Yes	Cronobacter turicensis z3032		39	24
No Yes	Cronobacter sakazakii ATCC BAA-894		41	26
No Yes	Candidatus Riesia pediculicola USDA		15	9
No Yes	Dickeya zeae Ech1591		44	28
No Yes	Dickeya dadantii Ech703		49	32
No Yes	Candidatus Hamiltonella defensa 5AT		16	9
No Yes	Candidatus Blochmannia floridanus		9	5
No Yes	Pectobacterium wasabiae WPP163		49	30
No Yes	Pectobacterium atrosepticum SCRI1043		42	26
No Yes	Pectobacterium carotovorum ssp. carotovorum PC1		45	27
No Yes	Sodalis glossinidius morsitans		27	17
No Yes	Pantoea ananatis LMG 20103		51	32
No Yes	Wigglesworthia glossinidia		10	6
No Yes	Buchnera aphidicola APS		11	6
No Yes	Photorhabdus asymbiotica		32	19
No Yes	Photorhabdus luminescens ssp. laumondii TTO1		32	19
No Yes	Edwardsiella ictaluri 93-146		30	20
No Yes	Edwardsiella tarda EIB202		35	22
No Yes	Yersinia pseudotuberculosis IP 32953		48	29
No Yes	Yersinia pestis CO92		44	27
No Yes	Yersinia enterocolitica ssp. enterocolitica 8081		51	31
No Yes	Xenorhabdus bovienii SS-2004		27	16
No Yes	Shigella sonnei Ss046		46	28
No Yes	Shigella flexneri 2a 2457T		35	22
No Yes	Shigella dysenteriae Sd197		42	26
No Yes	Shigella boydii Sb227		43	26
No Yes	Serratia proteamaculans 568		47	30
No Yes	Salmonella enterica ssp. enterica ser. Typhimurium LT2		54	33
No Yes	Proteus mirabilis HI4320		33	19
No Yes	Klebsiella variicola At-22		60	36
No Yes	Klebsiella pneumoniae ssp. pneumoniae MGH 78578		64	38
No Yes	Escherichia fergusonii ATCC 35469		59	36
No Yes	Escherichia coli K-12 subMG1655		54	34
No Yes	Erwinia tasmaniensis Et1/99		30	19
No Yes	Erwinia pyrifoliae Ep1/96		28	18
No Yes	Erwinia amylovora ATCC 49946		28	18
No Yes	Enterobacter sp. 638		39	24
No Yes	Citrobacter rodentium ICC168		57	34
No Yes	Citrobacter koseri ATCC BAA-895		59	36
No Yes	Azotobacter vinelandii DJ		35	21
No Yes	Pseudomonas entomophila L48		30	19
No Yes	Pseudomonas syringae pv. tomato DC3000		35	21
No Yes	Pseudomonas stutzeri A1501		32	19
No Yes	Pseudomonas putida KT2440		24	15
No Yes	Pseudomonas fluorescens Pf-5		31	18
No Yes	Pseudomonas mendocina ymp		31	18
No Yes	Pseudomonas aeruginosa PAO1		36	21
No Yes	Cellvibrio japonicus Ueda107		32	20
No Yes	Psychrobacter sp. PRwf-1		21	12
No Yes	Psychrobacter arcticus 273-4		22	12
No Yes	Psychrobacter cryohalolentis K5		25	14
No Yes	Acinetobacter sp. ADP1		25	14
No Yes	Acinetobacter baumannii ATCC 17978		27	15
No Yes	Thiomicrospira crunogena XCL-2		19	12
No Yes	Francisella philomiragia ssp. philomiragia ATCC 25017		22	15
No Yes	Francisella tularensis ssp. tularensis SCHU S4		19	12
No Yes	Gloeobacter violaceus PCC 7421		29	17
No Yes	Acaryochloris marina MBIC11017		29	18
No Yes	Prochlorococcus marinus MIT 9313		20	13
No Yes	Nostoc punctiforme PCC 73102		42	25
No Yes	Nostoc sp. PCC 7120		39	23
No Yes	Anabaena variabilis ATCC 29413		39	23
No Yes	Trichodesmium erythraeum IMS101		36	22
No Yes	Thermosynechococcus elongatus BP-1		23	15
No Yes	cyanobacterium UCYN-A		13	10
No Yes	Cyanothece sp. ATCC 51142		30	19
No Yes	Synechocystis sp. PCC 6803		27	17
No Yes	Synechococcus elongatus PCC 6301		25	15
No Yes	Microcystis aeruginosa NIES-843		26	16
No Yes	Nitrosopumilus maritimus SCM1		5	4
No Yes	Nanoarchaeum equitans Kin4-M		1	1
No Yes	Candidatus Korarchaeum cryptofilum OPF8		6	4
No Yes	Methanocella paludicola SANAE		7	6
No Yes	Methanosaeta thermophila PT		8	6
No Yes	Methanococcoides burtonii DSM 6242		14	11
No Yes	Methanosarcina acetivorans C2A		32	20
No Yes	Methanosarcina mazei Go1		23	15
No Yes	Methanosarcina barkeri Fusaro		21	15
No Yes	Methanohalophilus mahii DSM 5219		18	14
No Yes	Methanosphaerula palustris E1-9c		12	9
No Yes	Candidatus Methanoregula boonei 6A8		10	7
No Yes	Methanospirillum hungatei JF-1		12	8
No Yes	Methanocorpusculum labreanum Z		10	7
No Yes	Methanoculleus marisnigri JR1		6	5
No Yes	Methanopyrus kandleri AV19		13	11
No Yes	Ferroglobus placidus DSM 10642		11	10
No Yes	Archaeoglobus profundus DSM 5631		8	7
No Yes	Archaeoglobus fulgidus DSM 4304		14	10
No Yes	Thermococcus onnurineus NA1		6	5
No Yes	Thermococcus kodakarensis KOD1		7	6
No Yes	Thermococcus gammatolerans EJ3		9	6
No Yes	Thermococcus sibiricus MM 739		6	5
No Yes	Pyrococcus horikoshii OT3		4	4
No Yes	Pyrococcus abyssi GE5		6	5
No Yes	Pyrococcus furiosus DSM 3638		5	4
No Yes	Thermoplasma volcanium GSS1		10	6
No Yes	Thermoplasma acidophilum DSM 1728		10	6
No Yes	Picrophilus torridus DSM 9790		11	7
No Yes	Haloquadratum walsbyi DSM 16790		8	6
No Yes	Halomicrobium mukohataei DSM 12286		9	7
No Yes	Halorhabdus utahensis DSM 12940		14	10
No Yes	Haloterrigena turkmenica DSM 5511		8	5
No Yes	Natronomonas pharaonis DSM 2160		6	5
No Yes	Natrialba magadii ATCC 43099		8	6
No Yes	Halorubrum lacusprofundi ATCC 49239		7	5
No Yes	Haloferax volcanii DS2		10	7
No Yes	Halobacterium salinarum R1		7	5
No Yes	Halobacterium sp. NRC-1		7	5
No Yes	Haloarcula marismortui ATCC 43049		8	5
No Yes	Methanocaldococcus sp. FS406-22		8	8
No Yes	Methanocaldococcus fervens AG86		6	6
No Yes	Methanocaldococcus vulcanius M7		6	6
No Yes	Methanocaldococcus jannaschii DSM 2661		6	6
No Yes	Methanococcus aeolicus Nankai-3		6	6
No Yes	Methanococcus maripaludis S2		5	5
No Yes	Methanococcus vannielii SB		7	6
No Yes	Methanothermobacter thermautotrophicus Delta H		9	7
No Yes	Methanosphaera stadtmanae DSM 3091		11	9
No Yes	Methanobrevibacter ruminantium M1		13	8
No Yes	Methanobrevibacter smithii ATCC 35061		11	8
No Yes	uncultured methanogenic archaeon RC-I		8	7
No Yes	Aciduliprofundum boonei T469		7	5
No Yes	Hyperthermus butylicus DSM 5456		5	4
No Yes	Aeropyrum pernix K1		8	6
No Yes	Ignicoccus hospitalis KIN4/I		3	3
No Yes	Staphylothermus marinus F1		4	3
No Yes	Desulfurococcus kamchatkensis 1221n		8	6
No Yes	Metallosphaera sedula DSM 5348		10	7
No Yes	Sulfolobus tokodaii 7		6	4
No Yes	Sulfolobus islandicus Y.N.15.51		11	7
No Yes	Sulfolobus solfataricus P2		15	9
No Yes	Sulfolobus acidocaldarius DSM 639		14	8
No Yes	Thermofilum pendens Hrk 5		15	10
No Yes	Caldivirga maquilingensis IC-167		14	10
No Yes	Pyrobaculum calidifontis JCM 11548		5	5
No Yes	Pyrobaculum arsenaticum DSM 13514		4	4
No Yes	Pyrobaculum aerophilum IM2		3	3
No Yes	Pyrobaculum islandicum DSM 4184		4	4
No Yes	Thermoproteus neutrophilus V24Sta		4	4
No Yes	Drosophila melanogaster FlyBase 5.12 (all transcripts) (FlyBase)	Fruit fly	149	78
No Yes	Caenorhabditis elegans WormBase WS194 (all transcripts) (WormBase)	Nematode	78	42
No Yes	Cryptococcus neoformans var. grubii H99		54	29
No Yes	Cryptococcus neoformans B-3501A		57	30
No Yes	Ajellomyces dermatitidis ER-3		67	36
No Yes	Histoplasma capsulatum H143		68	38
No Yes	Histoplasma capsulatum H88		68	36
No Yes	Histoplasma capsulatum G186AR		67	35
No Yes	Paracoccidioides brasiliensis Pb01		63	34
No Yes	Paracoccidioides brasiliensis Pb03		58	32
No Yes	Coccidioides posadasii str. Silveira		67	36
No Yes	Coccidioides immitis RMSCC 3703		65	37
No Yes	Coccidioides immitis RMSCC 2394		71	38
No Yes	Coccidioides immitis H538.4		71	40
No Yes	Aspergillus fumigatus A1163		82	44
No Yes	Candida albicans WO-1		58	30
No Yes	Saccharomyces cerevisiae YJM789		73	38
No Yes	Saccharomyces cerevisiae RM11-1a		70	36
No Yes	Saccharomyces cerevisiae Ensembl 49_1h (all transcripts)	Baker's yeast	74	38
No Yes	Schizosaccharomyces pombe 972h-		46	25
No Yes	Batrachochytrium dendrobatidis JAM81		41	23
No Yes	Oryza sativa ssp. Indica (Subspecies)	Indian rice	178	97
No Yes	Plasmodium falciparum HB3		38	21
No Yes	Plasmodium falciparum Dd2		28	18
No Yes	Candidatus Phytoplasma australiense		6	4
No Yes	Ureaplasma parvum ser. 3 ATCC 27815		6	4
No Yes	Mycoplasma agalactiae		10	6
No Yes	Mycoplasma hyopneumoniae 7448		9	6
No Yes	Mycoplasma hyopneumoniae J		9	6
No Yes	Leptospira borgpetersenii ser. Hardjo-bovis JB197		21	13
No Yes	Leptospira interrogans ser. Copenhageni Fiocruz L1-130		20	12
No Yes	Leptospira biflexa ser. Patoc Patoc 1 (Ames)		19	11
No Yes	Treponema pallidum ssp. pallidum SS14		17	9
No Yes	Borrelia burgdorferi ZS7		20	11
No Yes	Bifidobacterium longum ssp. infantis ATCC 15697		25	19
No Yes	Bifidobacterium longum		29	20
No Yes	Bifidobacterium animalis ssp. lactis Bl-04		20	14
No Yes	Bifidobacterium animalis ssp. lactis DSM 10140		20	14
No Yes	Frankia sp. EAN1pec		55	33
No Yes	Propionibacterium acnes SK137		25	16
No Yes	Mycobacterium sp. KMS		35	22
No Yes	Mycobacterium sp. JLS		36	23
No Yes	Mycobacterium avium 104		26	17
No Yes	Mycobacterium tuberculosis KZN 1435		22	14
No Yes	Mycobacterium tuberculosis H37Ra		22	14
No Yes	Mycobacterium tuberculosis F11		22	14
No Yes	Mycobacterium tuberculosis CDC1551		22	14
No Yes	Mycobacterium bovis BCG Tokyo 172		22	14
No Yes	Mycobacterium bovis BCG Pasteur 1173P2		22	14
No Yes	Mycobacterium leprae Br4923		13	8
No Yes	Corynebacterium glutamicum R		24	15
No Yes	Corynebacterium glutamicum ATCC 13032 Bielefeld		24	15
No Yes	Tropheryma whipplei TW08/27		5	4
No Yes	Clavibacter michiganensis ssp. sepedonicus		17	13
No Yes	Dehalococcoides sp. GT		12	8
No Yes	Dehalococcoides sp. VS		14	10
No Yes	Dehalococcoides sp. BAV1		14	9
No Yes	Chlorobium phaeobacteroides BS1		20	12
No Yes	Porphyromonas gingivalis ATCC 33277		19	11
No Yes	Bacteroides fragilis YCH46		33	18
No Yes	Salinibacter ruber		27	15
No Yes	Candidatus Sulcia muelleri DMIN		2	1
No Yes	Candidiatus Sulcia muelleri SMDSEM		4	2
No Yes	Blattabacterium sp. BPLAN		13	7
No Yes	Chlamydophila pneumoniae J138		6	4
No Yes	Chlamydophila pneumoniae CWL029		6	4
No Yes	Chlamydophila pneumoniae AR39		6	4
No Yes	Chlamydia trachomatis B/TZ1A828/OT		6	4
No Yes	Chlamydia trachomatis B/Jali20/OT		6	4
No Yes	Chlamydia trachomatis L2b/UCH-1/proctitis		6	4
No Yes	Chlamydia trachomatis 434/Bu		6	4
No Yes	Chlamydia trachomatis A/HAR-13		6	4
No Yes	Thermus thermophilus HB8		14	9
No Yes	Desulfitobacterium hafniense DCB-2		48	33
No Yes	Clostridium kluyveri NBRC 12016		46	26
No Yes	Clostridium perfringens SM101		37	21
No Yes	Clostridium perfringens ATCC 13124		41	23
No Yes	Clostridium difficile R20291		47	28
No Yes	Clostridium difficile CD196		45	27
No Yes	Clostridium botulinum F Langeland		37	23
No Yes	Clostridium botulinum E3 Alaska E43		39	24
No Yes	Clostridium botulinum B1 Okra		37	23
No Yes	Clostridium botulinum Ba4 657		37	23
No Yes	Clostridium botulinum B Eklund 17B		48	28
No Yes	Clostridium botulinum A2 Kyoto		37	23
No Yes	Clostridium botulinum A3 Loch Maree		38	24
No Yes	Clostridium botulinum A Hall		36	22
No Yes	Clostridium botulinum A ATCC 19397		37	23
No Yes	Lactobacillus casei BL23		37	21
No Yes	Lactobacillus rhamnosus Lc 705		37	21
No Yes	Lactobacillus johnsonii FI9785		24	14
No Yes	Lactobacillus reuteri JCM 1112		34	20
No Yes	Lactobacillus plantarum JDM1		47	29
No Yes	Lactobacillus delbrueckii ssp. bulgaricus ATCC BAA-365		19	11
No Yes	Lactococcus lactis ssp. lactis KF147		27	17
No Yes	Lactococcus lactis ssp. cremoris MG1363		24	16
No Yes	Lactococcus lactis ssp. cremoris SK11		21	13
No Yes	Streptococcus equi ssp. equi 4047		16	11
No Yes	Streptococcus equi ssp. zooepidemicus		16	11
No Yes	Streptococcus pyogenes MGAS10750		15	10
No Yes	Streptococcus pyogenes MGAS10270		15	10
No Yes	Streptococcus pyogenes MGAS2096		16	11
No Yes	Streptococcus pyogenes MGAS9429		15	10
No Yes	Streptococcus pyogenes MGAS6180		15	10
No Yes	Streptococcus pyogenes NZ131		15	10
No Yes	Streptococcus pyogenes MGAS8232		15	10
No Yes	Streptococcus pyogenes MGAS10394		15	10
No Yes	Streptococcus pyogenes Manfredo		15	10
No Yes	Streptococcus pyogenes MGAS315		15	10
No Yes	Streptococcus pyogenes SSI-1		15	10
No Yes	Streptococcus pyogenes MGAS5005		15	10
No Yes	Streptococcus pneumoniae ATCC 700669		19	13
No Yes	Streptococcus pneumoniae CGSP14		19	13
No Yes	Streptococcus pneumoniae G54		20	14
No Yes	Streptococcus pneumoniae P1031		20	14
No Yes	Streptococcus pneumoniae JJA		19	13
No Yes	Streptococcus pneumoniae 70585		20	14
No Yes	Streptococcus pneumoniae Hungary19A-6		20	14
No Yes	Streptococcus pneumoniae Taiwan19F-14		18	12
No Yes	Streptococcus pneumoniae D39		19	13
No Yes	Streptococcus pneumoniae R6 (Non-virulent)		19	13
No Yes	Streptococcus agalactiae A909		16	10
No Yes	Streptococcus agalactiae 2603V/R		16	10
No Yes	Streptococcus mutans NN2025		13	8
No Yes	Streptococcus thermophilus LMD-9		12	8
No Yes	Streptococcus thermophilus CNRZ1066 (Younger strain)		14	10
No Yes	Streptococcus suis BM407		16	11
No Yes	Streptococcus suis SC84		15	10
No Yes	Streptococcus suis 98HAH33		15	11
No Yes	Streptococcus suis P1/7		15	10
No Yes	Listeria monocytogenes 08-5578		47	29
No Yes	Listeria monocytogenes 08-5923		47	29
No Yes	Listeria monocytogenes Clip80459		47	29
No Yes	Listeria monocytogenes HCC23		45	28
No Yes	Listeria monocytogenes 4b F2365		47	29
No Yes	Geobacillus sp. Y412MC61		32	19
No Yes	Geobacillus sp. Y412MC10		52	34
No Yes	Bacillus licheniformis ATCC 14580		36	21
No Yes	Bacillus cytotoxicus NVH 391-98		30	17
No Yes	Bacillus thuringiensis Al Hakam		41	24
No Yes	Bacillus cereus 03BB102		42	25
No Yes	Bacillus cereus AH820		40	24
No Yes	Bacillus cereus AH187		40	24
No Yes	Bacillus cereus B4264		36	21
No Yes	Bacillus cereus G9842		38	22
No Yes	Bacillus cereus Q1		40	24
No Yes	Bacillus cereus E33L		41	24
No Yes	Bacillus cereus ATCC 10987		44	26
No Yes	Bacillus anthracis A0248		36	22
No Yes	Bacillus anthracis CDC 684		44	27
No Yes	Bacillus anthracis Sterne		44	27
No Yes	Bacillus anthracis Ames		36	22
No Yes	Bacillus megaterium DSM319		35	20
No Yes	Staphylococcus epidermidis ATCC 12228		21	12
No Yes	Staphylococcus aureus RF122		18	11
No Yes	Staphylococcus aureus ssp. aureus ED98		18	11
No Yes	Staphylococcus aureus ssp. aureus Newman		18	11
No Yes	Staphylococcus aureus ssp. aureus Mu3		19	12
No Yes	Staphylococcus aureus ssp. aureus USA300_TCH1516		16	10
No Yes	Staphylococcus aureus ssp. aureus USA300_FPR3757		18	11
No Yes	Staphylococcus aureus ssp. aureus JH1		19	12
No Yes	Staphylococcus aureus ssp. aureus JH9		19	12
No Yes	Staphylococcus aureus ssp. aureus MSSA476		18	11
No Yes	Staphylococcus aureus ssp. aureus MRSA252		18	11
No Yes	Staphylococcus aureus ssp. aureus MW2		18	11
No Yes	Staphylococcus aureus ssp. aureus N315		19	12
No Yes	Staphylococcus aureus ssp. aureus Mu50		19	12
No Yes	Staphylococcus aureus ssp. aureus COL		18	11
No Yes	Campylobacter jejuni RM1221		16	9
No Yes	Campylobacter jejuni ssp. jejuni 81116		16	9
No Yes	Campylobacter jejuni ssp. jejuni 81-176		16	9
No Yes	Campylobacter jejuni ssp. doylei 269.97		17	10
No Yes	Helicobacter pylori B38		13	8
No Yes	Helicobacter pylori P12		17	11
No Yes	Helicobacter pylori G27		13	8
No Yes	Helicobacter pylori Shi470		15	9
No Yes	Helicobacter pylori HPAG1		15	10
No Yes	Helicobacter pylori J99		16	10
No Yes	Desulfovibrio vulgaris DP4		23	14
No Yes	Desulfovibrio vulgaris Miyazaki F		23	14
No Yes	Desulfovibrio desulfuricans ssp. desulfuricans ATCC 27774		23	15
No Yes	Geobacter sp. M21		39	24
No Yes	Anaeromyxobacter sp. K		53	28
No Yes	Anaeromyxobacter dehalogenans 2CP-1		53	28
No Yes	Azoarcus sp. BH72		27	16
No Yes	Neisseria meningitidis alpha14		19	12
No Yes	Neisseria meningitidis 053442		20	12
No Yes	Neisseria meningitidis FAM18		19	12
No Yes	Neisseria meningitidis MC58		22	13
No Yes	Neisseria gonorrhoeae NCCP11945		20	12
No Yes	Ralstonia eutropha H16		35	20
No Yes	Ralstonia pickettii 12D		27	16
No Yes	Polynucleobacter necessarius ssp. necessarius STIR1		14	8
No Yes	Burkholderia sp. CCGE1002		50	29
No Yes	Burkholderia pseudomallei MSHR346		30	17
No Yes	Burkholderia pseudomallei 1106a		46	27
No Yes	Burkholderia pseudomallei 668		45	26
No Yes	Burkholderia pseudomallei 1710b		43	25
No Yes	Burkholderia mallei NCTC 10229		35	20
No Yes	Burkholderia mallei NCTC 10247		37	21
No Yes	Burkholderia mallei SAVP1		35	20
No Yes	Burkholderia ambifaria MC40-6		42	24
No Yes	Burkholderia cenocepacia MC0-3		44	25
No Yes	Burkholderia cenocepacia HI2424		44	25
No Yes	Burkholderia cenocepacia J2315		44	24
No Yes	Burkholderia multivorans ATCC 17616		48	27
No Yes	Caulobacter crescentus NA1000		26	17
No Yes	Zymomonas mobilis ssp. mobilis NCIMB 11163		19	12
No Yes	Rhodobacter sphaeroides KD131		39	25
No Yes	Rhodobacter sphaeroides ATCC 17025		26	17
No Yes	Rhodobacter sphaeroides ATCC 17029		37	24
No Yes	Gluconacetobacter diazotrophicus PAl 5		35	21
No Yes	Ehrlichia ruminantium Gardel		10	6
No Yes	Ehrlichia ruminantium Welgevonden		10	6
No Yes	Anaplasma marginale Florida		13	8
No Yes	Orientia tsutsugamushi Ikeda		12	7
No Yes	Rickettsia bellii OSU 85-389		12	7
No Yes	Rickettsia rickettsii Iowa		12	7
No Yes	Methylobacterium extorquens DM4		30	19
No Yes	Methylobacterium extorquens AM1		27	18
No Yes	Brucella suis ATCC 23445		31	18
No Yes	Brucella melitensis ATCC 23457		29	17
No Yes	Brucella abortus S19		31	19
No Yes	Brucella melitensis biov. Abortus 2308		29	17
No Yes	Rhizobium etli CIAT 652		36	23
No Yes	Rhizobium leguminosarum bv. trifolii WSM2304		38	25
No Yes	Rhizobium leguminosarum bv. trifolii WSM1325		35	23
No Yes	Rhodopseudomonas palustris TIE-1		18	12
No Yes	Rhodopseudomonas palustris HaA2		19	12
No Yes	Rhodopseudomonas palustris BisB5		22	14
No Yes	Rhodopseudomonas palustris BisB18		35	23
No Yes	Rhodopseudomonas palustris BisA53		25	17
No Yes	Bradyrhizobium sp. BTAi1		40	25
No Yes	Acidithiobacillus ferrooxidans ATCC 53993		17	10
No Yes	Haemophilus somnus 2336		33	20
No Yes	Haemophilus influenzae PittGG		23	13
No Yes	Haemophilus influenzae PittEE		23	13
No Yes	Haemophilus influenzae 86-028NP		21	12
No Yes	Actinobacillus pleuropneumoniae ser. 3 JL03		29	17
No Yes	Actinobacillus pleuropneumoniae ser. 7 AP76		29	17
No Yes	Vibrio fischeri MJ11		38	23
No Yes	Vibrio vulnificus CMCP6 (Poor annotation)		38	23
No Yes	Vibrio cholerae M66-2		40	24
No Yes	Vibrio cholerae O395		41	25
No Yes	Vibrio cholerae MJ-1236		42	25
No Yes	Shewanella sp. W3-18-1		35	20
No Yes	Shewanella sp. ANA-3		36	22
No Yes	Shewanella baltica OS223		35	21
No Yes	Shewanella baltica OS185		33	20
No Yes	Shewanella baltica OS195		33	20
No Yes	Shewanella sp. MR-4		35	21
No Yes	Stenotrophomonas maltophilia K279a		28	18
No Yes	Xylella fastidiosa M23		21	13
No Yes	Xylella fastidiosa M12		21	13
No Yes	Xylella fastidiosa Temecula1		21	13
No Yes	Xanthomonas campestris pv. vesicatoria 85-10 (Completed 2005)		30	19
No Yes	Xanthomonas oryzae pv. oryzae PXO99A		26	17
No Yes	Xanthomonas oryzae pv. oryzae MAFF 311018		27	18
No Yes	Xanthomonas campestris pv. campestris B100		29	19
No Yes	Xanthomonas campestris pv. campestris 8004 (Completed 2005)		29	19
No Yes	Thioalkalivibrio sp. K90mix		23	13
No Yes	Coxiella burnetii CbuK_Q154		14	8
No Yes	Coxiella burnetii CbuG_Q212		12	7
No Yes	Coxiella burnetii Dugway 5J108-111		14	8
No Yes	Coxiella burnetii RSA 331		12	7
No Yes	Legionella pneumophila Corby		20	12
No Yes	Legionella pneumophila Paris		20	12
No Yes	Legionella pneumophila Lens		20	12
No Yes	Dickeya dadantii Ech586		50	33
No Yes	Candidatus Blochmannia pennsylvanicus BPEN		9	5
No Yes	Buchnera aphidicola Cc		11	6
No Yes	Buchnera aphidicola Bp		11	6
No Yes	Buchnera aphidicola Tuc7		11	6
No Yes	Buchnera aphidicola 5A		11	6
No Yes	Buchnera aphidicola Sg		11	6
No Yes	Yersinia pseudotuberculosis PB1/+		47	28
No Yes	Yersinia pseudotuberculosis YPIII		47	28
No Yes	Yersinia pseudotuberculosis IP 31758		48	29
No Yes	Yersinia pestis Z176003		44	27
No Yes	Yersinia pestis Pestoides F		49	30
No Yes	Yersinia pestis Nepal516		49	31
No Yes	Yersinia pestis Antiqua		49	31
No Yes	Yersinia pestis Angola		41	24
No Yes	Yersinia pestis biov. Microtus 91001		49	30
No Yes	Yersinia pestis KIM		47	29
No Yes	Shigella flexneri 5 8401		42	25
No Yes	Shigella flexneri 2a 301		35	22
No Yes	Shigella boydii CDC 3083-94		42	28
No Yes	Salmonella enterica ssp. arizonae ser. 62:z4,z23:--		46	29
No Yes	Salmonella enterica ssp. enterica ser. Schwarzengrund CVM19633		50	31
No Yes	Salmonella enterica ssp. enterica ser. Enteritidis P125109		52	32
No Yes	Salmonella enterica ssp. enterica ser. Choleraesuis str. SC-B67		48	30
No Yes	Salmonella enterica ssp. enterica ser. Newport SL254		54	33
No Yes	Salmonella enterica ssp. enterica ser. Dublin CT_02021853		50	31
No Yes	Salmonella enterica ssp. enterica ser. Typhi CT18		52	32
No Yes	Salmonella enterica ssp. enterica ser. Typhi Ty2		52	32
No Yes	Salmonella enterica ssp. enterica ser. Agona SL483		56	34
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi C RKS4594		54	33
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi B SPB7		55	34
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi A AKU_12601		50	31
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi A ATCC 9150		52	32
No Yes	Salmonella enterica ssp. enterica ser. Heidelberg SL476		54	33
No Yes	Salmonella enterica ssp. enterica ser. Gallinarum 287/91		47	29
No Yes	Klebsiella pneumoniae 342		65	39
No Yes	Klebsiella pneumoniae NTUH-K2044		68	41
No Yes	Escherichia coli ED1a		54	34
No Yes	Escherichia coli IAI39		52	33
No Yes	Escherichia coli UMN026		57	36
No Yes	Escherichia coli 55989		52	33
No Yes	Escherichia coli S88		57	36
No Yes	Escherichia coli IAI1		53	33
No Yes	Escherichia coli BL21		54	33
No Yes	Escherichia coli ATCC 8739		55	34
No Yes	Escherichia coli BL21(DE3)		54	33
No Yes	Escherichia coli SMS-3-5		56	35
No Yes	Escherichia coli SE11		55	35
No Yes	Escherichia coli APEC O1		56	35
No Yes	Escherichia coli O103:H2 12009		56	35
No Yes	Escherichia coli UTI89		55	34
No Yes	Escherichia coli 536		51	32
No Yes	Escherichia coli HS		53	33
No Yes	Escherichia coli E24377A		55	34
No Yes	Escherichia coli O55:H7 CB9615		58	35
No Yes	Escherichia coli O26:H11 11368		55	33
No Yes	Escherichia coli CFT073		55	35
No Yes	Escherichia coli O111:H- 11128		54	33
No Yes	Escherichia coli O127:H6 E2348/69		56	34
No Yes	Escherichia coli O157:H7 EDL933		54	33
No Yes	Escherichia coli O157:H7 TW14359		54	33
No Yes	Escherichia coli O157:H7 EC4115		53	32
No Yes	Escherichia coli O157:H7 Sakai		54	33
No Yes	Escherichia coli BW2952		54	34
No Yes	Escherichia coli K-12 subW3110		54	34
No Yes	Escherichia coli K-12 subDH10B		53	33
No Yes	Escherichia coli B REL606		54	33
No Yes	Erwinia amylovora CFBP1430		28	18
No Yes	Pseudomonas syringae pv. phaseolicola 1448A		33	20
No Yes	Pseudomonas syringae pv. syringae B728a		31	19
No Yes	Pseudomonas putida W619		27	17
No Yes	Pseudomonas putida F1		24	15
No Yes	Pseudomonas putida GB-1		26	16
No Yes	Pseudomonas fluorescens SBW25		35	21
No Yes	Pseudomonas fluorescens Pf0-1		33	19
No Yes	Pseudomonas aeruginosa LESB58		36	21
No Yes	Pseudomonas aeruginosa PA7		36	22
No Yes	Pseudomonas aeruginosa UCBPP-PA14		37	22
No Yes	Acinetobacter baumannii AB307-0294		23	13
No Yes	Acinetobacter baumannii AYE		23	13
No Yes	Acinetobacter baumannii SDF		19	11
No Yes	Acinetobacter baumannii AB0057		23	13
No Yes	Acinetobacter baumannii ACICU		23	13
No Yes	Francisella novicida U112		22	15
No Yes	Francisella tularensis ssp. mediasiatica FSC147		22	15
No Yes	Francisella tularensis ssp. holarctica FTNF002-00		19	12
No Yes	Francisella tularensis ssp. holarctica OSU18		21	13
No Yes	Francisella tularensis ssp. holarctica		19	12
No Yes	Francisella tularensis ssp. tularensis WY96-3418		21	14
No Yes	Francisella tularensis ssp. tularensis FSC198		19	12
No Yes	Prochlorococcus marinus NATL1A		17	11
No Yes	Prochlorococcus marinus MIT 9301		16	10
No Yes	Prochlorococcus marinus MIT 9515		15	10
No Yes	Prochlorococcus marinus AS9601		16	10
No Yes	Prochlorococcus marinus ssp. marinus CCMP1375		18	12
No Yes	Prochlorococcus marinus ssp. pastoris CCMP1986		18	12
No Yes	Prochlorococcus marinus MIT 9215		20	13
No Yes	Prochlorococcus marinus MIT 9211		18	12
No Yes	Prochlorococcus marinus MIT 9312		17	11
No Yes	Prochlorococcus marinus MIT 9303		21	14
No Yes	Prochlorococcus marinus NATL2A		17	11
No Yes	Cyanothece sp. PCC 8802		30	18
No Yes	Cyanothece sp. PCC 7425		31	18
No Yes	Cyanothece sp. PCC 7424		35	21
No Yes	Cyanothece sp. PCC 8801		30	18
No Yes	Synechococcus sp. JA-2-3Ba(2-13) (Poor annotation)		22	13
No Yes	Synechococcus sp. JA-3-3Ab (Poor annotation)		21	12
No Yes	Synechococcus sp. CC9902 (Poor annotation)		21	14
No Yes	Synechococcus sp. RCC307		23	15
No Yes	Synechococcus sp. CC9605 (Poor annotation)		22	14
No Yes	Synechococcus sp. WH 8102 (Good annotation)		24	15
No Yes	Synechococcus sp. CC9311		24	15
No Yes	Synechococcus sp. WH 7803		26	16
No Yes	Synechococcus sp. PCC 7002		23	14
No Yes	Synechococcus elongatus PCC 7942		25	15
No Yes	Methanococcus maripaludis C6		6	6
No Yes	Methanococcus maripaludis C7		6	6
No Yes	Methanococcus maripaludis C5		6	6
No Yes	Sulfolobus islandicus Y.G.57.14		11	7
No Yes	Sulfolobus islandicus L.S.2.15		13	8
No Yes	Sulfolobus islandicus M.16.27		13	8
No Yes	Sulfolobus islandicus M.14.25		13	8
No Yes	Sulfolobus islandicus M.16.4		13	8
No Yes	Sulfolobus islandicus L.D.8.5		13	8
No Yes	Ailuropoda melanoleuca (Draft)	Giant panda	123	61
No Yes	Moniliophthora perniciosa FA553 (Genome survey)		51	38
No Yes	Lotus japonicus (Early assembly)		13	7
No Yes	Prunus persica (Early draft)	Peach	129	68
No Yes	Manihot esculenta (Early draft)	Cassava	146	81
No Yes	Ricinus communis (Early assembly)	Castor bean	81	44
No Yes	Mimulus guttatus (Early draft)	Spotted monkey flower	125	67
No Yes	Phoenix dactylifera (Early draft)	Date palm	95	60
No Yes	Trypanosoma vivax (Parial)		50	30
No Yes	Trypanosoma congolense (Partial)		59	36
No Yes	Toxoplasma gondii GT1 (Early assembly)		39	21
No Yes	Toxoplasma gondii VEG (Early assembly)		37	20
No Yes	Toxoplasma gondii RH (Archived)		38	20
No Yes	Homo sapiens 49_36k (longest transcript per gene)	Human	140	71
No Yes	Pan troglodytes 49_21h (longest transcript per gene)	Chimpanzee	128	65
No Yes	Gorilla gorilla 52_1 (longest transcript per gene)	Western Gorilla	107	55
No Yes	Pongo pygmaeus 49_1 (longest transcript per gene)	Bornean orangutan	118	58
No Yes	Macaca mulatta 49_10h (longest transcript per gene)	Rhesus monkey	148	74
No Yes	Callithrix jacchus 56_3 (longest transcript per gene)	White-tufted-ear marmoset	146	73
No Yes	Otolemur garnettii 49_1c (longest transcript per gene)	Small-eared galago	110	56
No Yes	Microcebus murinus 49_1 (longest transcript per gene)	Gray mouse lemur	101	50
No Yes	Tarsius syrichta 51_1 (longest transcript per gene)	Philippine tarsier	80	44
No Yes	Rattus norvegicus 49_34s (longest transcript per gene)	Norway rat	138	76
No Yes	Mus musculus 49_37b (longest transcript per gene)	House mouse	125	62
No Yes	Spermophilus tridecemlineatus 49_1e (longest transcript per gene)	Thirteen-lined ground squirrel	92	46
No Yes	Dipodomys ordii 51_1 (longest transcript per gene)	Ord's kangaroo rat	102	53
No Yes	Cavia porcellus 51_3 (longest transcript per gene)	Domestic guinea pig	119	59
No Yes	Oryctolagus cuniculus 49_1f (longest transcript per gene)	Rabbit	110	57
No Yes	Ochotona princeps 49_1 (longest transcript per gene)	American pika	92	47
No Yes	Tupaia belangeri 49_1d (longest transcript per gene)	Northern tree shrew	88	46
No Yes	Sus scrofa 56_9 (longest transcript per gene)	Pig	109	55
No Yes	Bos taurus 49_3f (longest transcript per gene)	Cattle	110	55
No Yes	Vicugna pacos 51_1 (longest transcript per gene)	Alpaca	84	45
No Yes	Tursiops truncatus 51_1 (longest transcript per gene)	Bottlenosed dolphin	114	57
No Yes	Canis familiaris 49_2g (longest transcript per gene)	Dog	121	62
No Yes	Felis catus 49_1c (longest transcript per gene)	Domestic cat	102	51
No Yes	Equus caballus 49_2 (longest transcript per gene)	Horse	122	61
No Yes	Myotis lucifugus 49_1e (longest transcript per gene)	Little brown bat	89	45
No Yes	Pteropus vampyrus 51_1 (longest transcript per gene)	Large flying fox	108	54
No Yes	Sorex araneus 49_1c (longest transcript per gene)	European shrew	91	46
No Yes	Erinaceus europaeus 49_1c (longest transcript per gene)	Western European hedgehog	94	47
No Yes	Procavia capensis 51_1 (longest transcript per gene)	Cape rock hyrax	102	52
No Yes	Loxodonta africana 49_1d (longest transcript per gene)	African savanna elephant	95	51
No Yes	Echinops telfairi 49_1e (longest transcript per gene)	Small Madagascar hedgehog	109	55
No Yes	Dasypus novemcinctus 49_1f (longest transcript per gene)	Nine-banded armadillo	91	46
No Yes	Macropus eugenii 55_1 (longest transcript per gene)	Tammar wallaby	93	48
No Yes	Monodelphis domestica 49_5d (longest transcript per gene)	Gray short-tailed opossum	147	74
No Yes	Ornithorhynchus anatinus 49_1f (longest transcript per gene)	Platypus	96	54
No Yes	Anolis carolinensis 55_1a (longest transcript per gene)	Green anole	107	55
No Yes	Taeniopygia guttata 57_1c (longest transcript per gene)	Zebra finch	88	48
No Yes	Meleagris gallopavo 57_2 (longest transcript per gene)	Turkey	93	45
No Yes	Gallus gallus 49_2g (longest transcript per gene)	Chicken	89	44
No Yes	Xenopus tropicalis 49_41i (longest transcript per gene)	Western clawed frog	107	53
No Yes	Danio rerio 49_7c (longest transcript per gene)	Zebrafish	121	63
No Yes	Gasterosteus aculeatus 49_1f (longest transcript per gene)	Three-spined stickleback	118	58
No Yes	Oryzias latipes 49_1e (longest transcript per gene)	Japanese medaka	112	55
No Yes	Tetraodon nigroviridis 49_1k (longest transcript per gene)	Spotted green pufferfish	112	61
No Yes	Takifugu rubripes 49_4i (longest transcript per gene)	Torafugu	118	59
No Yes	Ciona savignyi 49_2f (longest transcript per gene)		70	36
No Yes	Ciona intestinalis 49_2i (longest transcript per gene)		90	48
No Yes	Apis mellifera 37.2d (longest transcript per gene) (Not maintained)	Honey bee	49	33
No Yes	Drosophila melanogaster FlyBase 5.12 (longest transcript per gene) (FlyBase)	Fruit fly	149	78
No Yes	Drosophila melanogaster Ensembl 49_54 (longest transcript per gene)	Fruit fly	87	45
No Yes	Aedes aegypti 49_1b (longest transcript per gene)	Yellow fever mosquito	64	34
No Yes	Anopheles gambiae 49_3j (longest transcript per gene)	African malaria mosquito	63	34
No Yes	Caenorhabditis elegans WormBase WS194 (longest transcript per gene) (WormBase)	Nematode	68	36
No Yes	Caenorhabditis elegans Ensembl 49_180a (longest transcript per gene)	Nematode	67	36
No Yes	Arabidopsis thaliana 9 (longest transcript per gene)	Thale cress	100	53
No Yes	Oryza sativa ssp. japonica 5.0 (Not transposons)	Japanese rice	206	109
No Yes	NCBI viral sequences (Viral)		60	30
No Yes	PDB chains (SCOP 1.73) (PDB)		196	98
No Yes	TargetDB (Targets)		1916	1203
No Yes	UniProt 15.0 (UniProt)		59959	36240
No Yes	UniProt 15.0 viral sequences (Viral)		528	375