PLP-dependent transferases superfamily domain assignments
in
Saccharomyces cerevisiae SGD

Select to display	Genome		Domains	Proteins
No Yes	ALL		98908	98908
No Yes	Homo sapiens 49_36k (all transcripts)	Human	99	97
No Yes	Pan troglodytes 49_21h (all transcripts)	Chimpanzee	70	68
No Yes	Gorilla gorilla 52_1 (all transcripts)	Western Gorilla	41	40
No Yes	Pongo pygmaeus 49_1 (all transcripts)	Bornean orangutan	57	56
No Yes	Macaca mulatta 49_10h (all transcripts)	Rhesus monkey	85	83
No Yes	Callithrix jacchus 56_3 (all transcripts)	White-tufted-ear marmoset	81	80
No Yes	Otolemur garnettii 49_1c (all transcripts)	Small-eared galago	40	40
No Yes	Microcebus murinus 49_1 (all transcripts)	Gray mouse lemur	40	39
No Yes	Tarsius syrichta 51_1 (all transcripts)	Philippine tarsier	37	35
No Yes	Rattus norvegicus 49_34s (all transcripts)	Norway rat	63	61
No Yes	Mus musculus 49_37b (all transcripts)	House mouse	77	75
No Yes	Spermophilus tridecemlineatus 49_1e (all transcripts)	Thirteen-lined ground squirrel	38	37
No Yes	Dipodomys ordii 51_1 (all transcripts)	Ord's kangaroo rat	41	40
No Yes	Cavia porcellus 51_3 (all transcripts)	Domestic guinea pig	44	43
No Yes	Oryctolagus cuniculus 49_1f (all transcripts)	Rabbit	36	35
No Yes	Ochotona princeps 49_1 (all transcripts)	American pika	44	43
No Yes	Tupaia belangeri 49_1d (all transcripts)	Northern tree shrew	39	38
No Yes	Sus scrofa 56_9 (all transcripts)	Pig	45	44
No Yes	Bos taurus 49_3f (all transcripts)	Cattle	56	55
No Yes	Vicugna pacos 51_1 (all transcripts)	Alpaca	34	33
No Yes	Tursiops truncatus 51_1 (all transcripts)	Bottlenosed dolphin	43	42
No Yes	Canis familiaris 49_2g (all transcripts)	Dog	58	57
No Yes	Felis catus 49_1c (all transcripts)	Domestic cat	38	37
No Yes	Equus caballus 49_2 (all transcripts)	Horse	50	49
No Yes	Myotis lucifugus 49_1e (all transcripts)	Little brown bat	41	40
No Yes	Pteropus vampyrus 51_1 (all transcripts)	Large flying fox	41	40
No Yes	Sorex araneus 49_1c (all transcripts)	European shrew	35	34
No Yes	Erinaceus europaeus 49_1c (all transcripts)	Western European hedgehog	39	38
No Yes	Procavia capensis 51_1 (all transcripts)	Cape rock hyrax	40	39
No Yes	Loxodonta africana 49_1d (all transcripts)	African savanna elephant	34	33
No Yes	Echinops telfairi 49_1e (all transcripts)	Small Madagascar hedgehog	41	40
No Yes	Dasypus novemcinctus 49_1f (all transcripts)	Nine-banded armadillo	34	33
No Yes	Macropus eugenii 55_1 (all transcripts)	Tammar wallaby	41	41
No Yes	Monodelphis domestica 49_5d (all transcripts)	Gray short-tailed opossum	61	60
No Yes	Ornithorhynchus anatinus 49_1f (all transcripts)	Platypus	64	64
No Yes	Anolis carolinensis 55_1a (all transcripts)	Green anole	48	47
No Yes	Taeniopygia guttata 57_1c (all transcripts)	Zebra finch	45	44
No Yes	Meleagris gallopavo 57_2 (all transcripts)	Turkey	43	43
No Yes	Gallus gallus 49_2g (all transcripts)	Chicken	48	46
No Yes	Xenopus laevis	African clawed frog	81	79
No Yes	Xenopus tropicalis 49_41i (all transcripts)	Western clawed frog	61	58
No Yes	Danio rerio 49_7c (all transcripts)	Zebrafish	57	56
No Yes	Gasterosteus aculeatus 49_1f (all transcripts)	Three-spined stickleback	89	87
No Yes	Oryzias latipes 49_1e (all transcripts)	Japanese medaka	60	59
No Yes	Tetraodon nigroviridis 49_1k (all transcripts)	Spotted green pufferfish	55	53
No Yes	Takifugu rubripes 49_4i (all transcripts)	Torafugu	102	100
No Yes	Branchiostoma floridae 1.0	Florida lancelet	131	126
No Yes	Ciona savignyi 49_2f (all transcripts)		116	110
No Yes	Ciona intestinalis 49_2i (all transcripts)		92	92
No Yes	Strongylocentrotus purpuratus	Purple sea urchin	163	157
No Yes	Helobdella robusta		42	41
No Yes	Capitella sp. I		87	86
No Yes	Bombyx mori	Domestic silkworm	46	46
No Yes	Nasonia vitripennis	Jewel wasp	44	44
No Yes	Apis mellifera 37.2d (all transcripts) (Not maintained)	Honey bee	141	139
No Yes	Drosophila grimshawi 1.3		37	36
No Yes	Drosophila willistoni 1.3		36	35
No Yes	Drosophila pseudoobscura 2.3		39	37
No Yes	Drosophila persimilis 1.3		39	38
No Yes	Drosophila yakuba 1.3		36	35
No Yes	Drosophila simulans 1.3		32	32
No Yes	Drosophila sechellia 1.3		35	34
No Yes	Drosophila melanogaster Ensembl 49_54 (all transcripts)	Fruit fly	59	58
No Yes	Drosophila erecta 1.3		34	33
No Yes	Drosophila ananassae 1.3		38	37
No Yes	Drosophila virilis 1.2		39	38
No Yes	Drosophila mojavensis 1.3		37	36
No Yes	Aedes aegypti 49_1b (all transcripts)	Yellow fever mosquito	54	52
No Yes	Culex pipiens quinquefasciatus	Southern house mosquito	42	41
No Yes	Anopheles gambiae 49_3j (all transcripts)	African malaria mosquito	40	40
No Yes	Tribolium castaneum 3.0	Red flour beetle	44	41
No Yes	Pediculus humanus corporis (Early assembly)	Human body louse	40	38
No Yes	Acyrthosiphon pisum	Pea aphid	42	41
No Yes	Daphnia pulex	Common water flea	71	70
No Yes	Ixodes scapularis (Preliminary)	Black-legged tick	49	48
No Yes	Lottia gigantea		63	62
No Yes	Pristionchus pacificus		45	44
No Yes	Meloidogyne incognita	Southern root-knot nematode	41	40
No Yes	Meloidogyne hapla		33	32
No Yes	Brugia malayi	Agent of lymphatic filariasis	13	13
No Yes	Caenorhabditis japonica		44	44
No Yes	Caenorhabditis brenneri		36	34
No Yes	Caenorhabditis remanei		66	65
No Yes	Caenorhabditis elegans Ensembl 49_180a (all transcripts)	Nematode	89	87
No Yes	Caenorhabditis briggsae 2		45	44
No Yes	Schistosoma mansoni		23	22
No Yes	Nematostella vectensis 1.0	Starlet sea anemone	75	74
No Yes	Hydra magnipapillata		88	85
No Yes	Trichoplax adhaerens		52	51
No Yes	Proterospongia sp. ATCC 50818		47	46
No Yes	Monosiga brevicollis		44	43
No Yes	Capsaspora owczarzaki ATCC 30864		46	45
No Yes	Malassezia globosa CBS 7966		31	30
No Yes	Ustilago maydis		39	38
No Yes	Puccinia graminis f. sp. tritici CRL 75-36-700-3		45	44
No Yes	Melampsora laricis-populina		44	43
No Yes	Sporobolomyces roseus IAM 13481		40	39
No Yes	Serpula lacrymans var. lacrymans S7.9		44	43
No Yes	Coprinopsis cinerea okayama7 130		47	46
No Yes	Pleurotus ostreatus	Oyster mushroom	48	47
No Yes	Laccaria bicolor S238N-H82		42	41
No Yes	Agaricus bisporus var. bisporus		41	40
No Yes	Schizophyllum commune		50	49
No Yes	Heterobasidion annosum		41	40
No Yes	Phanerochaete chrysosporium RP-78 2.1		48	47
No Yes	Postia placenta		78	76
No Yes	Tremella mesenterica		40	39
No Yes	Cryptococcus neoformans JEC21		38	37
No Yes	Magnaporthe grisea 70-15		52	50
No Yes	Podospora anserina		51	50
No Yes	Sporotrichum thermophile ATCC 42464		47	46
No Yes	Thielavia terrestris NRRL 8126		44	43
No Yes	Chaetomium globosum CBS 148.51		53	52
No Yes	Neurospora tetrasperma		44	43
No Yes	Neurospora discreta FGSC 8579		46	45
No Yes	Neurospora crassa OR74A		47	46
No Yes	Cryphonectria parasitica	Chestnut blight fungus	54	53
No Yes	Fusarium oxysporum f. sp. lycopersici 4286		89	88
No Yes	Nectria haematococca mpVI		99	98
No Yes	Fusarium verticillioides 7600		84	82
No Yes	Fusarium graminearum		76	75
No Yes	Trichoderma atroviride		60	59
No Yes	Trichoderma reesei 1.2		54	53
No Yes	Trichoderma virens Gv29-8		69	68
No Yes	Verticillium dahliae VdLs.17		59	57
No Yes	Verticillium albo-atrum VaMs.102		58	57
No Yes	Botrytis cinerea B05.10		56	55
No Yes	Sclerotinia sclerotiorum		50	49
No Yes	Alternaria brassicicola		48	47
No Yes	Pyrenophora tritici-repentis		54	52
No Yes	Cochliobolus heterostrophus		57	55
No Yes	Stagonospora nodorum		59	58
No Yes	Mycosphaerella fijiensis CIRAD86		44	43
No Yes	Mycosphaerella graminicola IPO323		55	54
No Yes	Ajellomyces dermatitidis SLH14081		50	49
No Yes	Histoplasma capsulatum class NAmI strain WU24		49	48
No Yes	Microsporum gypseum		57	56
No Yes	Arthroderma benhamiae CBS 112371		55	54
No Yes	Microsporum canis CBS 113480		56	55
No Yes	Trichophyton equinum CBS 127.97		52	51
No Yes	Trichophyton verrucosum HKI 0517		54	53
No Yes	Trichophyton tonsurans CBS 112818		52	51
No Yes	Trichophyton rubrum CBS 118892		54	53
No Yes	Paracoccidioides brasiliensis Pb18		45	44
No Yes	Coccidioides posadasii RMSCC 3488		51	49
No Yes	Coccidioides immitis RS		51	49
No Yes	Uncinocarpus reesii 1704		49	48
No Yes	Aspergillus fumigatus Af293		60	59
No Yes	Neosartorya fischeri NRRL 181		73	72
No Yes	Penicillium chrysogenum Wisconsin 54-1255		61	60
No Yes	Penicillium marneffei ATCC 18224		72	71
No Yes	Aspergillus carbonarius ITEM 5010		68	67
No Yes	Aspergillus terreus NIH2624		76	75
No Yes	Aspergillus oryzae RIB40		91	90
No Yes	Aspergillus niger ATCC 1015		51	51
No Yes	Aspergillus flavus NRRL3357		94	93
No Yes	Aspergillus clavatus NRRL 1		55	54
No Yes	Aspergillus nidulans FGSC A4		60	59
No Yes	Tuber melanosporum Vittad	Perigord truffle	50	49
No Yes	Candida dubliniensis CD36		40	39
No Yes	Candida tropicalis MYA-3404		46	45
No Yes	Candida parapsilosis		36	35
No Yes	Candida albicans SC5314		42	41
No Yes	Yarrowia lipolytica CLIB122		39	38
No Yes	Candida lusitaniae ATCC 42720		40	39
No Yes	Vanderwaltozyma polyspora DSM 70294		28	27
No Yes	Candida glabrata CBS138		32	31
No Yes	Kluyveromyces thermotolerans CBS 6340		43	42
No Yes	Lachancea kluyveri		41	40
No Yes	Kluyveromyces waltii		39	38
No Yes	Lodderomyces elongisporus NRRL YB-4239		36	35
No Yes	Ashbya gossypii ATCC 10895		26	26
No Yes	Debaromyces hansenii		43	42
No Yes	Zygosaccharomyces rouxii		38	37
No Yes	Saccharomyces mikatae MIT		36	35
No Yes	Saccharomyces paradoxus MIT		38	37
No Yes	Saccharomyces cerevisiae SGD (SGD)	Baker's yeast	35	34
No Yes	Saccharomyces bayanus MIT		38	38
No Yes	Candida guilliermondii ATCC 6260		53	52
No Yes	Pichia stipitis CBS 6054		42	41
No Yes	Pichia pastoris GS115		35	34
No Yes	Kluyveromyces lactis		35	34
No Yes	Schizosaccharomyces octosporus yFS286		29	28
No Yes	Schizosaccharomyces japonicus yFS275		28	27
No Yes	Schizosaccharomyces pombe	Fission yeast	32	31
No Yes	Allomyces macrogynus ATCC 38327		87	86
No Yes	Rhizopus oryzae RA 99-880		52	51
No Yes	Phycomyces blakesleeanus		49	48
No Yes	Mucor circinelloides		50	49
No Yes	Encephalitozoon intestinalis		5	5
No Yes	Encephalitozoon cuniculi		5	5
No Yes	Spizellomyces punctatus DAOM BR117		41	40
No Yes	Batrachochytrium dendrobatidis JEL423		33	32
No Yes	Dictyostelium discoideum		38	37
No Yes	Dictyostelium purpureum		46	45
No Yes	Entamoeba dispar		20	18
No Yes	Entamoeba invadens		20	18
No Yes	Entamoeba histolytica 1		24	22
No Yes	Arabidopsis lyrata	Lyrate rockcress	99	97
No Yes	Arabidopsis thaliana 9 (all transcripts)	Thale cress	139	136
No Yes	Carica papaya	Papaya	83	81
No Yes	Medicago truncatula	Barrel medic	114	113
No Yes	Glycine max	Soybean	192	186
No Yes	Cucumis sativus	Cucumber	166	163
No Yes	Populus trichocarpa 1.1	Black cottonwood	181	180
No Yes	Vitis vinifera	Wine grape	127	124
No Yes	Brachypodium distachyon		128	126
No Yes	Oryza sativa ssp. japonica 5.0	Japanese rice	164	159
No Yes	Zea mays subsp. mays	Maize	210	208
No Yes	Sorghum bicolor	Sorghum	101	95
No Yes	Selaginella moellendorffii		146	144
No Yes	Physcomitrella patens subsp. patens		104	101
No Yes	Coccomyxa sp. C-169		55	54
No Yes	Chlorella sp. NC64A		55	55
No Yes	Chlorella vulgaris		55	54
No Yes	Volvox carteri f. nagariensis		51	50
No Yes	Chlamydomonas reinhardtii 4.0		50	49
No Yes	Ostreococcus sp. RCC809		38	37
No Yes	Ostreococcus lucimarinus CCE9901		38	37
No Yes	Ostreococcus tauri		38	37
No Yes	Micromonas sp. RCC299		49	48
No Yes	Micromonas pusilla CCMP1545		48	47
No Yes	Cyanidioschyzon merolae		41	40
No Yes	Giardia lamblia		8	8
No Yes	Trypanosoma cruzi strain CL Brener		53	51
No Yes	Trypanosoma brucei		17	16
No Yes	Leishmania mexicana		24	23
No Yes	Leishmania major strain Friedlin		24	23
No Yes	Leishmania infantum JPCM5		24	23
No Yes	Leishmania braziliensis MHOM/BR/75/M2904		25	24
No Yes	Aureococcus anophagefferens		74	73
No Yes	Phytophthora ramorum 1.1	Sudden oak death agent	70	69
No Yes	Phytophthora sojae 1.1		60	58
No Yes	Phytophthora infestans T30-4		53	52
No Yes	Phytophthora capsici		95	92
No Yes	Phaeodactylum tricornutum		57	56
No Yes	Fragilariopsis cylindrus		100	99
No Yes	Thalassiosira pseudonana		52	51
No Yes	Paramecium tetraurelia		53	51
No Yes	Tetrahymena thermophila SB210 1		41	40
No Yes	Babesia bovis T2Bo		4	4
No Yes	Theileria parva		4	4
No Yes	Theileria annulata		4	4
No Yes	Plasmodium falciparum 3D7		10	10
No Yes	Plasmodium vivax SaI-1		10	10
No Yes	Plasmodium knowlesi strain H		10	10
No Yes	Plasmodium yoelii ssp. yoelii 1		10	10
No Yes	Plasmodium chabaudi		13	13
No Yes	Plasmodium berghei ANKA		12	12
No Yes	Cryptosporidium hominis		4	4
No Yes	Cryptosporidium muris		8	8
No Yes	Cryptosporidium parvum Iowa II		5	5
No Yes	Neospora caninum Nc-Liverpool		21	20
No Yes	Neospora caninum		21	20
No Yes	Toxoplasma gondii ME49		20	20
No Yes	Naegleria gruberi		48	47
No Yes	Trichomonas vaginalis		51	51
No Yes	Emiliania huxleyi CCMP1516		122	119
No Yes	Candidatus Phytoplasma mali		2	2
No Yes	Aster yellows witches-broom phytoplasma AYWB		2	2
No Yes	Onion yellows phytoplasma OY-M		2	2
No Yes	Acholeplasma laidlawii PG-8A		7	7
No Yes	Mesoplasma florum L1		2	2
No Yes	Ureaplasma parvum ser. 3 ATCC 700970		1	1
No Yes	Ureaplasma urealyticum ser. 10 ATCC 33699		1	1
No Yes	Mycoplasma mycoides ssp. mycoides SC PG1		4	4
No Yes	Mycoplasma capricolum ssp. capricolum ATCC 27343		3	3
No Yes	Mycoplasma crocodyli MP145		2	2
No Yes	Mycoplasma conjunctivae		2	2
No Yes	Mycoplasma penetrans HF-2		3	3
No Yes	Mycoplasma mobile 163K		3	3
No Yes	Mycoplasma arthritidis 158L3-1		3	3
No Yes	Mycoplasma agalactiae PG2		2	2
No Yes	Mycoplasma synoviae 53		2	2
No Yes	Mycoplasma pulmonis UAB CTIP		3	3
No Yes	Mycoplasma pneumoniae M129		2	2
No Yes	Mycoplasma hyopneumoniae 232		2	2
No Yes	Mycoplasma hominis		2	2
No Yes	Mycoplasma genitalium G37		2	2
No Yes	Mycoplasma gallisepticum R		2	2
No Yes	Aminobacterium colombiense DSM 12261		34	34
No Yes	Thermanaerovibrio acidaminovorans DSM 6589		31	31
No Yes	Brachyspira hyodysenteriae WA1		20	20
No Yes	Leptospira borgpetersenii ser. Hardjo-bovis L550		27	26
No Yes	Leptospira interrogans ser. Lai 56601		29	28
No Yes	Leptospira biflexa ser. Patoc Patoc 1 (Paris)		33	32
No Yes	Treponema pallidum ssp. pallidum Nichols		6	6
No Yes	Treponema denticola ATCC 35405		20	20
No Yes	Borrelia garinii PBi		3	3
No Yes	Borrelia afzelii PKo		3	3
No Yes	Borrelia burgdorferi B31		3	3
No Yes	Borrelia recurrentis A1		3	3
No Yes	Borrelia duttonii Ly		3	3
No Yes	Borrelia turicatae 91E135		3	3
No Yes	Borrelia hermsii DAH		3	3
No Yes	Rhodopirellula baltica SH 1		30	30
No Yes	Pirellula staleyi DSM 6068		35	35
No Yes	Gardnerella vaginalis 409-05		7	7
No Yes	Bifidobacterium longum NCC2705		22	22
No Yes	Bifidobacterium animalis ssp. lactis AD011		20	20
No Yes	Bifidobacterium dentium Bd1		26	26
No Yes	Bifidobacterium adolescentis ATCC 15703		19	19
No Yes	Kineococcus radiotolerans SRS30216		37	36
No Yes	Catenulispora acidiphila DSM 44928		66	65
No Yes	Stackebrandtia nassauensis DSM 44728		39	38
No Yes	Acidothermus cellulolyticus 11B		24	23
No Yes	Nakamurella multipartita DSM 44233		48	47
No Yes	Geodermatophilus obscurus DSM 43160		33	32
No Yes	Frankia sp. CcI3		45	44
No Yes	Frankia alni ACN14a		45	44
No Yes	Thermobifida fusca YX		28	27
No Yes	Thermomonospora curvata DSM 43183		38	37
No Yes	Streptosporangium roseum DSM 43021		72	71
No Yes	Streptomyces griseus ssp. griseus NBRC 13350		70	69
No Yes	Streptomyces avermitilis MA-4680		70	69
No Yes	Streptomyces scabiei 87.22		76	75
No Yes	Streptomyces coelicolor A3(2)		63	62
No Yes	Actinosynnema mirum DSM 43827		64	63
No Yes	Saccharomonospora viridis DSM 43017		38	37
No Yes	Saccharopolyspora erythraea NRRL 2338		71	70
No Yes	Kribbella flavida DSM 17836		52	51
No Yes	Nocardioides sp. JS614		47	46
No Yes	Propionibacterium acnes KPA171202		22	21
No Yes	Salinispora arenicola CNS-205		55	54
No Yes	Salinispora tropica CNB-440		44	43
No Yes	Gordonia bronchialis DSM 43247		36	35
No Yes	Rhodococcus jostii RHA1		56	54
No Yes	Rhodococcus opacus B4		61	59
No Yes	Rhodococcus erythropolis PR4		48	47
No Yes	Nocardia farcinica IFM 10152		43	42
No Yes	Mycobacterium abscessus		51	50
No Yes	Mycobacterium sp. MCS		41	40
No Yes	Mycobacterium avium ssp. paratuberculosis K-10		36	35
No Yes	Mycobacterium vanbaalenii PYR-1		42	41
No Yes	Mycobacterium tuberculosis H37Rv		37	36
No Yes	Mycobacterium bovis AF2122/97		36	35
No Yes	Mycobacterium ulcerans Agy99		36	35
No Yes	Mycobacterium gilvum PYR-GCK		36	35
No Yes	Mycobacterium marinum M		46	44
No Yes	Mycobacterium smegmatis MC2 155		58	57
No Yes	Mycobacterium leprae TN		21	20
No Yes	Corynebacterium aurimucosum		25	24
No Yes	Corynebacterium kroppenstedtii DSM 44385		24	23
No Yes	Corynebacterium efficiens YS-314		21	21
No Yes	Corynebacterium urealyticum DSM 7109		18	17
No Yes	Corynebacterium jeikeium K411		18	17
No Yes	Corynebacterium glutamicum ATCC 13032 Kitasato		24	24
No Yes	Corynebacterium diphtheriae NCTC 13129		19	19
No Yes	Tropheryma whipplei Twist		7	6
No Yes	Sanguibacter keddieii DSM 10542		28	27
No Yes	Kytococcus sedentarius DSM 20547		24	23
No Yes	Beutenbergia cavernae DSM 12333		40	39
No Yes	Leifsonia xyli ssp. xyli CTCB07		20	20
No Yes	Clavibacter michiganensis ssp. michiganensis NCPPB 382		27	26
No Yes	Jonesia denitrificans DSM 20603		20	20
No Yes	Brachybacterium faecium DSM 4810		27	26
No Yes	Xylanimonas cellulosilytica DSM 15894		27	26
No Yes	Kocuria rhizophila DC2201		31	30
No Yes	Rothia mucilaginosa DY-18		15	14
No Yes	Arthrobacter sp. FB24		44	43
No Yes	Arthrobacter chlorophenolicus A6		43	41
No Yes	Arthrobacter aurescens TC1		47	45
No Yes	Renibacterium salmoninarum ATCC 33209		38	37
No Yes	Micrococcus luteus NCTC 2665		25	24
No Yes	Cryptobacterium curtum DSM 15641		16	16
No Yes	Eggerthella lenta DSM 2243		23	23
No Yes	Slackia heliotrinireducens DSM 20476		29	29
No Yes	Atopobium parvulum DSM 20469		10	10
No Yes	Conexibacter woesei DSM 14684		58	58
No Yes	Rubrobacter xylanophilus DSM 9941		28	28
No Yes	Acidimicrobium ferrooxidans DSM 10331		24	24
No Yes	Denitrovibrio acetiphilus DSM 12809		28	28
No Yes	Deferribacter desulfuricans SSM1		22	22
No Yes	Kosmotoga olearia TBF 19.5.1		16	16
No Yes	Petrotoga mobilis SJ95		21	21
No Yes	Fervidobacterium nodosum Rt17-B1		14	14
No Yes	Thermosipho melanesiensis BI429		17	17
No Yes	Thermosipho africanus TCF52B		18	18
No Yes	Thermotoga lettingae TMO		20	20
No Yes	Thermotoga sp. RQ2		16	16
No Yes	Thermotoga naphthophila RKU-10		17	17
No Yes	Thermotoga petrophila RKU-1		16	16
No Yes	Thermotoga neapolitana DSM 4359		17	17
No Yes	Thermotoga maritima MSB8		16	16
No Yes	Dehalococcoides sp. CBDB1		10	10
No Yes	Dehalococcoides ethenogenes 195		10	10
No Yes	Thermomicrobium roseum DSM 5159		25	25
No Yes	Sphaerobacter thermophilus DSM 20745		41	41
No Yes	Herpetosiphon aurantiacus ATCC 23779		38	38
No Yes	Roseiflexus sp. RS-1		38	38
No Yes	Roseiflexus castenholzii DSM 13941		43	43
No Yes	Chloroflexus sp. Y-400-fl		43	43
No Yes	Chloroflexus aggregans DSM 9485		40	40
No Yes	Chloroflexus aurantiacus J-10-fl		43	43
No Yes	Sulfurihydrogenibium sp. YO3AOP1		13	13
No Yes	Sulfurihydrogenibium azorense Az-Fu1		17	17
No Yes	Persephonella marina EX-H1		17	17
No Yes	Hydrogenobaculum sp. Y04AAS1		14	14
No Yes	Thermocrinis albus DSM 14484		18	18
No Yes	Aquifex aeolicus VF5		18	18
No Yes	Hydrogenobacter thermophilus TK-6		20	20
No Yes	Gemmatimonas aurantiaca T-27		45	44
No Yes	Fibrobacter succinogenes ssp. succinogenes S85		30	30
No Yes	Candidatus Koribacter versatilis Ellin345		51	51
No Yes	Candidatus Solibacter usitatus Ellin6076		58	58
No Yes	Acidobacterium capsulatum ATCC 51196		26	26
No Yes	Elusimicrobium minutum Pei191		17	17
No Yes	uncultured Termite group 1 bacterium phylotype Rs-D17		14	14
No Yes	Pelodictyon phaeoclathratiforme BU-1		24	24
No Yes	Pelodictyon luteolum DSM 273		24	24
No Yes	Chlorobium chlorochromatii CaD3		20	20
No Yes	Chlorobium phaeobacteroides DSM 266		22	22
No Yes	Chlorobium phaeovibrioides DSM 265		19	19
No Yes	Chlorobium limicola DSM 245		25	25
No Yes	Chlorobaculum parvum NCIB 8327		20	20
No Yes	Chlorobium tepidum TLS		21	21
No Yes	Chloroherpeton thalassium ATCC 35110		19	19
No Yes	Prosthecochloris aestuarii DSM 271		18	18
No Yes	Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2		12	12
No Yes	Prevotella ruminicola 23		21	21
No Yes	Parabacteroides distasonis ATCC 8503		39	38
No Yes	Porphyromonas gingivalis W83		18	17
No Yes	Bacteroides vulgatus ATCC 8482		30	29
No Yes	Bacteroides thetaiotaomicron VPI-5482		30	29
No Yes	Bacteroides fragilis NCTC 9343		35	34
No Yes	Candidatus Amoebophilus asiaticus 5a2		4	4
No Yes	Salinibacter ruber DSM 13855		29	28
No Yes	Rhodothermus marinus DSM 4252		28	27
No Yes	Chitinophaga pinensis DSM 2588		54	53
No Yes	Dyadobacter fermentans DSM 18053		48	47
No Yes	Cytophaga hutchinsonii ATCC 33406		30	29
No Yes	Spirosoma linguale DSM 74		48	47
No Yes	Pedobacter heparinus DSM 2366		40	39
No Yes	Candidatus Sulcia muelleri GWSS		4	4
No Yes	Zunongwangia profunda SM-A87		35	34
No Yes	Gramella forsetii KT0803		40	39
No Yes	Robiginitalea biformata HTCC2501		39	38
No Yes	Flavobacteriaceae bacterium 3519-10		25	24
No Yes	Capnocytophaga ochracea DSM 7271		18	18
No Yes	Flavobacterium psychrophilum JIP02/86		28	27
No Yes	Flavobacterium johnsoniae UW101		44	43
No Yes	Blattabacterium sp. Bge		11	10
No Yes	Dictyoglomus turgidum DSM 6724		13	13
No Yes	Dictyoglomus thermophilum H-6-12		14	14
No Yes	Candidatus Protochlamydia amoebophila UWE25		12	12
No Yes	Chlamydophila pneumoniae TW-183		10	10
No Yes	Chlamydophila caviae GPIC		9	9
No Yes	Chlamydophila felis Fe/C-56		11	11
No Yes	Chlamydophila abortus S26/3		10	10
No Yes	Chlamydia muridarum Nigg		8	8
No Yes	Chlamydia trachomatis D/UW-3/CX		8	8
No Yes	Coraliomargarita akajimensis DSM 45221		21	20
No Yes	Opitutus terrae PB90-1		32	31
No Yes	Methylacidiphilum infernorum V4		25	24
No Yes	Akkermansia muciniphila ATCC BAA-835		27	26
No Yes	Thermodesulfovibrio yellowstonii DSM 11347		17	17
No Yes	Streptobacillus moniliformis DSM 12112		6	6
No Yes	Sebaldella termitidis ATCC 33386		19	19
No Yes	Leptotrichia buccalis DSM 1135		17	17
No Yes	Fusobacterium nucleatum ssp. nucleatum ATCC 25586		20	20
No Yes	Thermobaculum terrenum ATCC BAA-798		25	25
No Yes	Deinococcus deserti VCD115		27	26
No Yes	Deinococcus geothermalis DSM 11300		27	26
No Yes	Deinococcus radiodurans R1		30	29
No Yes	Meiothermus ruber DSM 1279		34	33
No Yes	Thermus thermophilus HB27 (First sequenced)		22	22
No Yes	Natranaerobius thermophilus JW/NM-WN-LF		28	28
No Yes	Symbiobacterium thermophilum IAM 14863		36	36
No Yes	Anaerococcus prevotii DSM 20548		12	12
No Yes	Finegoldia magna ATCC 29328		18	18
No Yes	Clostridiales genomosp. BVAB3 UPII9-5		16	16
No Yes	Anaerocellum thermophilum DSM 6725		20	20
No Yes	Candidatus Desulforudis audaxviator MP104C		20	20
No Yes	Pelotomaculum thermopropionicum SI		26	26
No Yes	Desulfitobacterium hafniense Y51		38	38
No Yes	Desulfotomaculum reducens MI-1		28	28
No Yes	Desulfotomaculum acetoxidans DSM 771		24	24
No Yes	Eubacterium rectale ATCC 33656		27	27
No Yes	Eubacterium eligens ATCC 27750		19	19
No Yes	Syntrophomonas wolfei ssp. wolfei Goettingen		22	22
No Yes	Heliobacterium modesticaldum Ice1		24	24
No Yes	Alkaliphilus oremlandii OhILAs		29	29
No Yes	Alkaliphilus metalliredigens QYMF		48	48
No Yes	Clostridium phytofermentans ISDg		39	39
No Yes	Clostridium novyi NT		24	24
No Yes	Clostridium kluyveri DSM 555		42	42
No Yes	Clostridium cellulolyticum H10		27	27
No Yes	Clostridium beijerinckii NCIMB 8052		47	47
No Yes	Clostridium thermocellum ATCC 27405		31	31
No Yes	Clostridium tetani E88		25	25
No Yes	Clostridium perfringens 13		24	24
No Yes	Clostridium difficile 630		44	44
No Yes	Clostridium botulinum A ATCC 3502		42	42
No Yes	Clostridium acetobutylicum ATCC 824		36	36
No Yes	Veillonella parvula DSM 2008		20	20
No Yes	Acidaminococcus fermentans DSM 20731		23	23
No Yes	Caldicellulosiruptor saccharolyticus DSM 8903		20	20
No Yes	Coprothermobacter proteolyticus DSM 5265		19	19
No Yes	Carboxydothermus hydrogenoformans Z-2901		22	22
No Yes	Moorella thermoacetica ATCC 39073		26	26
No Yes	Ammonifex degensii KC4		16	16
No Yes	Thermoanaerobacter pseudethanolicus ATCC 33223		26	26
No Yes	Thermoanaerobacter sp. X514		29	29
No Yes	Thermoanaerobacter tengcongensis MB4		29	29
No Yes	Thermoanaerobacter italicus Ab9		24	24
No Yes	Halothermothrix orenii H 168		19	19
No Yes	Enterococcus faecalis V583		20	20
No Yes	Oenococcus oeni PSU-1		11	11
No Yes	Leuconostoc citreum KM20		14	14
No Yes	Leuconostoc mesenteroides ssp. mesenteroides ATCC 8293		22	22
No Yes	Lactobacillus casei ATCC 334		16	16
No Yes	Lactobacillus crispatus ST1		11	11
No Yes	Lactobacillus rhamnosus GG		18	18
No Yes	Lactobacillus johnsonii NCC 533		8	8
No Yes	Lactobacillus salivarius UCC118		14	14
No Yes	Lactobacillus fermentum IFO 3956		21	21
No Yes	Lactobacillus sakei ssp. sakei 23K		9	9
No Yes	Lactobacillus reuteri DSM 20016		18	18
No Yes	Lactobacillus gasseri ATCC 33323		6	6
No Yes	Lactobacillus plantarum WCFS1		27	27
No Yes	Lactobacillus helveticus DPC 4571		13	13
No Yes	Lactobacillus delbrueckii ssp. bulgaricus ATCC 11842		11	11
No Yes	Lactobacillus brevis ATCC 367		12	12
No Yes	Lactobacillus acidophilus NCFM		13	13
No Yes	Pediococcus pentosaceus ATCC 25745		7	7
No Yes	Lactococcus lactis ssp. lactis Il1403		17	17
No Yes	Streptococcus gallolyticus UCN34		21	21
No Yes	Streptococcus equi ssp. zooepidemicus MGCS10565		7	7
No Yes	Streptococcus dysgalactiae ssp. equisimilis GGS_124		9	9
No Yes	Streptococcus mitis B6		12	12
No Yes	Streptococcus uberis 0140J		13	13
No Yes	Streptococcus pyogenes M1 GAS		8	8
No Yes	Streptococcus pneumoniae TIGR4 (Virulent)		12	12
No Yes	Streptococcus agalactiae NEM316		11	11
No Yes	Streptococcus mutans UA159		17	17
No Yes	Streptococcus thermophilus LMG 18311 (Older strain)		16	16
No Yes	Streptococcus suis 05ZYH33		16	16
No Yes	Streptococcus sanguinis SK36		17	17
No Yes	Streptococcus gordonii Challis subCH1		13	13
No Yes	Exiguobacterium sp. AT1b		28	28
No Yes	Exiguobacterium sibiricum 255-15		25	25
No Yes	Bacillus tusciae DSM 2912		32	32
No Yes	Alicyclobacillus acidocaldarius ssp. acidocaldarius DSM 446		29	29
No Yes	Brevibacillus brevis NBRC 100599		72	72
No Yes	Paenibacillus sp. JDR-2		46	46
No Yes	Listeria welshimeri ser. 6b SLCC5334		25	25
No Yes	Listeria innocua Clip11262		27	27
No Yes	Listeria seeligeri ser. 1/2b SLCC3954		28	28
No Yes	Listeria monocytogenes EGD-e		28	28
No Yes	Lysinibacillus sphaericus C3-41		44	44
No Yes	Oceanobacillus iheyensis HTE831		34	34
No Yes	Anoxybacillus flavithermus WK1		29	29
No Yes	Geobacillus sp. WCH70		36	36
No Yes	Geobacillus thermodenitrificans NG80-2		34	34
No Yes	Geobacillus kaustophilus HTA426		38	38
No Yes	Bacillus subtilis ssp. subtilis 168		44	44
No Yes	Bacillus licheniformis ATCC 14580		45	45
No Yes	Bacillus amyloliquefaciens FZB42		46	46
No Yes	Bacillus halodurans C-125		48	48
No Yes	Bacillus weihenstephanensis KBAB4		52	52
No Yes	Bacillus thuringiensis ser. konkukian 97-27		48	48
No Yes	Bacillus cereus ATCC 14579		50	50
No Yes	Bacillus anthracis Ames Ancestor		49	49
No Yes	Bacillus pseudofirmus OF4		46	46
No Yes	Bacillus clausii KSM-K16		40	40
No Yes	Bacillus pumilus SAFR-032		40	40
No Yes	Bacillus megaterium QM B1551		56	56
No Yes	Macrococcus caseolyticus JCSC5402		21	21
No Yes	Staphylococcus saprophyticus ssp. saprophyticus ATCC 15305		29	29
No Yes	Staphylococcus lugdunensis HKU09-01		25	25
No Yes	Staphylococcus haemolyticus JCSC1435		27	27
No Yes	Staphylococcus epidermidis RP62A		25	25
No Yes	Staphylococcus carnosus ssp. carnosus TM300		32	32
No Yes	Staphylococcus aureus ssp. aureus NCTC 8325		28	28
No Yes	Nautilia profundicola AmH		15	15
No Yes	Sulfurospirillum deleyianum DSM 6946		23	23
No Yes	Arcobacter butzleri RM4018		29	29
No Yes	Campylobacter hominis ATCC BAA-381		13	13
No Yes	Campylobacter lari RM2100		15	15
No Yes	Campylobacter curvus 525.92		17	17
No Yes	Campylobacter concisus 13826		18	18
No Yes	Campylobacter jejuni ssp. jejuni NCTC 11168		20	20
No Yes	Campylobacter fetus ssp. fetus 82-40		16	16
No Yes	Sulfurimonas denitrificans DSM 1251		23	23
No Yes	Wolinella succinogenes DSM 1740		24	24
No Yes	Helicobacter hepaticus ATCC 51449		20	20
No Yes	Helicobacter mustelae 12198		14	14
No Yes	Helicobacter acinonychis Sheeba		12	12
No Yes	Helicobacter pylori 26695		12	12
No Yes	Nitratiruptor sp. SB155-2		16	16
No Yes	Sulfurovum sp. NBC37-1		19	19
No Yes	Bdellovibrio bacteriovorus HD100		20	19
No Yes	Syntrophus aciditrophicus SB		28	28
No Yes	Syntrophobacter fumaroxidans MPOB		31	31
No Yes	Desulfotalea psychrophila LSv54		30	30
No Yes	Desulfatibacillum alkenivorans AK-01		34	34
No Yes	Desulfobacterium autotrophicum HRM2		35	35
No Yes	Desulfococcus oleovorans Hxd3		28	28
No Yes	Desulfohalobium retbaense DSM 5692		20	20
No Yes	Desulfomicrobium baculatum DSM 4028		30	30
No Yes	Lawsonia intracellularis PHE/MN1-00		11	11
No Yes	Desulfovibrio magneticus RS-1		36	36
No Yes	Desulfovibrio vulgaris Hildenborough		32	32
No Yes	Desulfovibrio salexigens DSM 2638		36	36
No Yes	Desulfovibrio desulfuricans ssp. desulfuricans G20		29	29
No Yes	Pelobacter propionicus DSM 2379		28	28
No Yes	Pelobacter carbinolicus DSM 2380		32	32
No Yes	Geobacter uraniireducens Rf4		38	38
No Yes	Geobacter sp. FRC-32		36	36
No Yes	Geobacter lovleyi SZ		37	37
No Yes	Geobacter bemidjiensis Bem		39	39
No Yes	Geobacter sulfurreducens PCA		31	31
No Yes	Geobacter metallireducens GS-15		34	34
No Yes	Haliangium ochraceum DSM 14365		58	56
No Yes	Sorangium cellulosum So ce 56		54	54
No Yes	Anaeromyxobacter sp. Fw109-5		38	38
No Yes	Anaeromyxobacter dehalogenans 2CP-C		36	36
No Yes	Myxococcus xanthus DK 1622		49	47
No Yes	Magnetococcus sp. MC-1		31	31
No Yes	Sideroxydans lithotrophicus ES-1		24	23
No Yes	Aromatoleum aromaticum EbN1		30	29
No Yes	Dechloromonas aromatica RCB		32	31
No Yes	Thauera sp. MZ1T		36	35
No Yes	Laribacter hongkongensis HLHK9		30	29
No Yes	Chromobacterium violaceum ATCC 12472		47	46
No Yes	Neisseria meningitidis Z2491		18	17
No Yes	Neisseria gonorrhoeae FA 1090		18	17
No Yes	Methylotenera mobilis JLW8		23	23
No Yes	Methylovorus sp. SIP3-4		26	26
No Yes	Methylobacillus flagellatus KT		24	24
No Yes	Thiobacillus denitrificans ATCC 25259		23	23
No Yes	Candidatus Accumulibacter phosphatis clade IIA UW-1		34	33
No Yes	Methylibium petroleiphilum PM1		42	41
No Yes	Leptothrix cholodnii SP-6		41	40
No Yes	Ralstonia eutropha JMP134		52	51
No Yes	Cupriavidus taiwanensis		56	55
No Yes	Ralstonia metallidurans CH34		55	54
No Yes	Ralstonia pickettii 12J		43	42
No Yes	Ralstonia solanacearum GMI1000		35	34
No Yes	Polynucleobacter necessarius ssp. asymbioticus QLW-P1DMWA-1		19	19
No Yes	Burkholderia phytofirmans PsJN		82	81
No Yes	Burkholderia phymatum STM815		67	66
No Yes	Burkholderia thailandensis E264		64	63
No Yes	Burkholderia pseudomallei K96243		75	74
No Yes	Burkholderia mallei ATCC 23344		60	59
No Yes	Burkholderia sp. 383		85	84
No Yes	Burkholderia ambifaria AMMD		83	82
No Yes	Burkholderia cenocepacia AU 1054		76	75
No Yes	Burkholderia multivorans ATCC 17616		72	71
No Yes	Burkholderia vietnamiensis G4		66	65
No Yes	Burkholderia xenovorans LB400		80	79
No Yes	Burkholderia glumae BGR1		67	66
No Yes	Verminephrobacter eiseniae EF01-2		49	48
No Yes	Delftia acidovorans SPH-1		63	62
No Yes	Polaromonas sp. JS666		52	51
No Yes	Polaromonas naphthalenivorans CJ2		42	41
No Yes	Variovorax paradoxus S110		59	58
No Yes	Rhodoferax ferrireducens T118		41	40
No Yes	Diaphorobacter sp. TPSY		29	28
No Yes	Acidovorax sp. JS42		33	32
No Yes	Acidovorax citrulli AAC00-1		45	44
No Yes	Comamonas sp. CNB-1		45	44
No Yes	Herminiimonas arsenicoxydans		29	29
No Yes	Janthinobacterium sp. Marseille		34	34
No Yes	Bordetella petrii DSM 12804		51	50
No Yes	Bordetella avium 197N		50	49
No Yes	Bordetella pertussis Tohama I		42	41
No Yes	Bordetella parapertussis 12822		51	50
No Yes	Bordetella bronchiseptica RB50		61	60
No Yes	Nitrosospira multiformis ATCC 25196		25	25
No Yes	Nitrosomonas eutropha C91		21	21
No Yes	Nitrosomonas europaea ATCC 19718		24	24
No Yes	Caulobacter sp. K31		37	37
No Yes	Caulobacter crescentus CB15		35	35
No Yes	Caulobacter segnis ATCC 21756		37	37
No Yes	Phenylobacterium zucineum HLK1		37	37
No Yes	Erythrobacter litoralis HTCC2594		24	24
No Yes	Sphingopyxis alaskensis RB2256		24	24
No Yes	Novosphingobium aromaticivorans DSM 12444		25	25
No Yes	Sphingobium japonicum UT26S		28	28
No Yes	Sphingomonas wittichii RW1		44	44
No Yes	Zymomonas mobilis ssp. mobilis ZM4		27	27
No Yes	Maricaulis maris MCS10		27	27
No Yes	Hirschia baltica ATCC 49814		26	26
No Yes	Hyphomonas neptunium ATCC 15444		36	36
No Yes	Dinoroseobacter shibae DFL 12		41	40
No Yes	Jannaschia sp. CCS1		44	43
No Yes	Ruegeria sp. TM1040		42	41
No Yes	Ruegeria pomeroyi DSS-3		48	48
No Yes	Roseobacter denitrificans OCh 114		50	49
No Yes	Rhodobacter sphaeroides 2.4.1		43	42
No Yes	Rhodobacter capsulatus SB1003		41	40
No Yes	Paracoccus denitrificans PD1222		45	44
No Yes	Magnetospirillum magneticum AMB-1		44	44
No Yes	Rhodospirillum centenum SW		34	34
No Yes	Rhodospirillum rubrum ATCC 11170		45	45
No Yes	Azospirillum sp. B510		19	19
No Yes	Granulibacter bethesdensis CGDNIH1		25	25
No Yes	Gluconacetobacter diazotrophicus PAl 5		38	37
No Yes	Gluconobacter oxydans 621H		27	26
No Yes	Acetobacter pasteurianus IFO 3283-01		31	30
No Yes	alpha proteobacterium IMCC1322		37	36
No Yes	Candidatus Pelagibacter ubique HTCC1062		15	14
No Yes	Neorickettsia sennetsu Miyayama		8	8
No Yes	Neorickettsia risticii Illinois		8	8
No Yes	Ehrlichia chaffeensis Arkansas		9	9
No Yes	Ehrlichia canis Jake		8	8
No Yes	Ehrlichia ruminantium Welgevonden		8	8
No Yes	Anaplasma phagocytophilum HZ		9	9
No Yes	Anaplasma marginale St. Maries		10	10
No Yes	Anaplasma centrale Israel		9	9
No Yes	Orientia tsutsugamushi Boryong		3	3
No Yes	Rickettsia bellii RML369-C		5	5
No Yes	Rickettsia canadensis McKiel		5	5
No Yes	Rickettsia typhi Wilmington		5	5
No Yes	Rickettsia prowazekii Madrid E		5	5
No Yes	Rickettsia peacockii Rustic		5	5
No Yes	Rickettsia felis URRWXCal2		5	5
No Yes	Rickettsia massiliae MTU5		5	5
No Yes	Rickettsia africae ESF-5		5	5
No Yes	Rickettsia akari Hartford		5	5
No Yes	Rickettsia rickettsii Sheila Smith		5	5
No Yes	Rickettsia conorii Malish 7		5	5
No Yes	Wolbachia endosymbiont of Culex_quinquefasciatus Pel		8	8
No Yes	Wolbachia endosymbiont of Drosophila melanogaster (Genus only)		10	10
No Yes	Wolbachia endosymbiont TRS of Brugia malayi		7	7
No Yes	Wolbachia sp. wRi		12	12
No Yes	Xanthobacter autotrophicus Py2		39	39
No Yes	Azorhizobium caulinodans ORS 571		45	45
No Yes	Methylobacterium chloromethanicum CM4		38	37
No Yes	Methylobacterium extorquens PA1		40	39
No Yes	Methylobacterium sp. 4-46		54	53
No Yes	Methylobacterium populi BJ001		36	35
No Yes	Methylobacterium nodulans ORS 2060		58	57
No Yes	Methylobacterium radiotolerans JCM 2831		50	50
No Yes	Candidatus Hodgkinia cicadicola Dsem		4	4
No Yes	Ochrobactrum anthropi ATCC 49188		47	46
No Yes	Brucella microti CCM 4915		34	33
No Yes	Brucella canis ATCC 23365		33	32
No Yes	Brucella suis 1330		32	31
No Yes	Brucella melitensis bv. 1 16M		37	36
No Yes	Brucella ovis ATCC 25840		29	28
No Yes	Brucella abortus bv. 1 9-941		31	30
No Yes	Sinorhizobium medicae WSM419		37	36
No Yes	Sinorhizobium meliloti 1021		39	38
No Yes	Rhizobium etli CFN 42		37	36
No Yes	Rhizobium sp. NGR234		41	40
No Yes	Rhizobium leguminosarum bv. viciae 3841		37	36
No Yes	Agrobacterium vitis S4		38	37
No Yes	Agrobacterium radiobacter K84		51	50
No Yes	Agrobacterium tumefaciens C58		39	38
No Yes	Candidatus Liberibacter asiaticus psy62		9	9
No Yes	Chelativorans sp. BNC1		38	37
No Yes	Parvibaculum lavamentivorans DS-1		31	31
No Yes	Mesorhizobium loti MAFF303099		80	79
No Yes	Methylocella silvestris BL2		35	35
No Yes	Beijerinckia indica ssp. indica ATCC 9039		33	33
No Yes	Oligotropha carboxidovorans OM5		27	26
No Yes	Rhodopseudomonas palustris CGA009		49	48
No Yes	Nitrobacter winogradskyi Nb-255		31	30
No Yes	Nitrobacter hamburgensis X14		30	29
No Yes	Bradyrhizobium sp. ORS278		54	53
No Yes	Bradyrhizobium japonicum USDA 110		72	71
No Yes	Bartonella tribocorum CIP 105476		9	8
No Yes	Bartonella henselae Houston-1		9	8
No Yes	Bartonella grahamii as4aup		9	8
No Yes	Bartonella quintana Toulouse		9	8
No Yes	Bartonella bacilliformis KC583		9	8
No Yes	Acidithiobacillus ferrooxidans ATCC 23270		21	21
No Yes	Mannheimia succiniciproducens MBEL55E		20	20
No Yes	Aggregatibacter aphrophilus NJ8700		17	17
No Yes	Aggregatibacter actinomycetemcomitans D11S-1		17	17
No Yes	Haemophilus somnus 129PT		16	16
No Yes	Pasteurella multocida ssp. multocida Pm70		21	21
No Yes	Haemophilus parasuis SH0165		17	17
No Yes	Haemophilus ducreyi 35000HP		12	12
No Yes	Haemophilus influenzae Rd KW20		17	17
No Yes	Actinobacillus succinogenes 130Z		18	18
No Yes	Actinobacillus pleuropneumoniae L20		21	21
No Yes	Tolumonas auensis DSM 9187		25	25
No Yes	Aeromonas salmonicida ssp. salmonicida A449		35	34
No Yes	Aeromonas hydrophila ssp. hydrophila ATCC 7966		42	41
No Yes	Aliivibrio salmonicida LFI1238		41	39
No Yes	Vibrio fischeri ES114		32	31
No Yes	Vibrio parahaemolyticus RIMD 2210633		45	43
No Yes	Vibrio harveyi ATCC BAA-1116		41	39
No Yes	Vibrio sp. Ex25		46	44
No Yes	Vibrio splendidus LGP32		43	41
No Yes	Vibrio vulnificus YJ016 (Good annotation)		40	38
No Yes	Vibrio cholerae O1 biov. El Tor N16961		31	31
No Yes	Photobacterium profundum SS9		43	41
No Yes	Psychromonas ingrahamii 37		32	31
No Yes	Idiomarina loihiensis L2TR		25	24
No Yes	Shewanella piezotolerans WP3		35	34
No Yes	Shewanella loihica PV-4		28	27
No Yes	Shewanella halifaxensis HAW-EB4		34	33
No Yes	Shewanella sediminis HAW-EB3		35	34
No Yes	Shewanella denitrificans OS217		34	33
No Yes	Shewanella pealeana ATCC 700345		36	35
No Yes	Shewanella oneidensis MR-1		32	31
No Yes	Shewanella baltica OS155		35	34
No Yes	Shewanella woodyi ATCC 51908		41	40
No Yes	Shewanella sp. MR-7		31	30
No Yes	Shewanella amazonensis SB2B		35	34
No Yes	Shewanella violacea DSS12		30	29
No Yes	Shewanella frigidimarina NCIMB 400		27	26
No Yes	Shewanella putrefaciens CN-32		31	30
No Yes	Colwellia psychrerythraea 34H		42	40
No Yes	Pseudoalteromonas atlantica T6c		32	31
No Yes	Pseudoalteromonas haloplanktis TAC125		29	28
No Yes	Teredinibacter turnerae T7901		30	29
No Yes	Saccharophagus degradans 2-40		26	25
No Yes	Marinobacter aquaeolei VT8		28	28
No Yes	Alteromonas macleodii Deep ecotype		29	28
No Yes	Hahella chejuensis KCTC 2396		46	45
No Yes	Alcanivorax borkumensis SK2		26	26
No Yes	Marinomonas sp. MWYL1		50	49
No Yes	Chromohalobacter salexigens DSM 3043		34	33
No Yes	Methylococcus capsulatus Bath		28	28
No Yes	Dichelobacter nodosus VCS1703A		9	8
No Yes	Stenotrophomonas maltophilia R551-3		33	32
No Yes	Xylella fastidiosa 9a5c		13	12
No Yes	Xanthomonas axonopodis pv. citri 306		33	32
No Yes	Xanthomonas albilineans		31	30
No Yes	Xanthomonas oryzae pv. oryzae KACC10331		29	28
No Yes	Xanthomonas campestris pv. campestris ATCC 33913 (Completed 2001)		35	34
No Yes	Halothiobacillus neapolitanus c2		27	27
No Yes	Alkalilimnicola ehrlichii MLHE-1		27	27
No Yes	Thioalkalivibrio sp. HL-EbGR7		22	22
No Yes	Halorhodospira halophila SL1		24	24
No Yes	Allochromatium vinosum DSM 180		26	26
No Yes	Nitrosococcus halophilus Nc4		34	34
No Yes	Nitrosococcus oceani ATCC 19707		30	30
No Yes	Coxiella burnetii RSA 493		17	17
No Yes	Legionella longbeachae NSW150		25	25
No Yes	Legionella pneumophila ssp. pneumophila Philadelphia 1		22	22
No Yes	Kangiella koreensis DSM 16069		21	20
No Yes	Baumannia cicadellinicola Hc		10	10
No Yes	Candidatus Carsonella ruddii PV		2	2
No Yes	Candidatus Vesicomyosocius okutanii HA		13	13
No Yes	Candidatus Ruthia magnifica Cm		15	14
No Yes	Cronobacter turicensis z3032		40	39
No Yes	Cronobacter sakazakii ATCC BAA-894		41	40
No Yes	Candidatus Riesia pediculicola USDA		5	5
No Yes	Dickeya zeae Ech1591		41	40
No Yes	Dickeya dadantii Ech703		48	47
No Yes	Candidatus Hamiltonella defensa 5AT		11	11
No Yes	Candidatus Blochmannia floridanus		8	8
No Yes	Pectobacterium wasabiae WPP163		47	46
No Yes	Pectobacterium atrosepticum SCRI1043		48	47
No Yes	Pectobacterium carotovorum ssp. carotovorum PC1		55	53
No Yes	Sodalis glossinidius morsitans		21	20
No Yes	Pantoea ananatis LMG 20103		46	45
No Yes	Wigglesworthia glossinidia		9	9
No Yes	Buchnera aphidicola APS		6	6
No Yes	Photorhabdus asymbiotica		48	47
No Yes	Photorhabdus luminescens ssp. laumondii TTO1		56	55
No Yes	Edwardsiella ictaluri 93-146		34	33
No Yes	Edwardsiella tarda EIB202		39	38
No Yes	Yersinia pseudotuberculosis IP 32953		42	41
No Yes	Yersinia pestis CO92		36	35
No Yes	Yersinia enterocolitica ssp. enterocolitica 8081		43	42
No Yes	Xenorhabdus bovienii SS-2004		34	33
No Yes	Shigella sonnei Ss046		36	35
No Yes	Shigella flexneri 2a 2457T		39	38
No Yes	Shigella dysenteriae Sd197		33	32
No Yes	Shigella boydii Sb227		34	33
No Yes	Serratia proteamaculans 568		61	60
No Yes	Salmonella enterica ssp. enterica ser. Typhimurium LT2		43	42
No Yes	Proteus mirabilis HI4320		34	33
No Yes	Klebsiella variicola At-22		59	58
No Yes	Klebsiella pneumoniae ssp. pneumoniae MGH 78578		54	53
No Yes	Escherichia fergusonii ATCC 35469		43	42
No Yes	Escherichia coli K-12 subMG1655		41	40
No Yes	Erwinia tasmaniensis Et1/99		44	43
No Yes	Erwinia pyrifoliae Ep1/96		41	40
No Yes	Erwinia amylovora ATCC 49946		43	42
No Yes	Enterobacter sp. 638		45	44
No Yes	Citrobacter rodentium ICC168		37	36
No Yes	Citrobacter koseri ATCC BAA-895		48	47
No Yes	Azotobacter vinelandii DJ		40	38
No Yes	Pseudomonas entomophila L48		63	61
No Yes	Pseudomonas syringae pv. tomato DC3000		49	48
No Yes	Pseudomonas stutzeri A1501		39	38
No Yes	Pseudomonas putida KT2440		64	62
No Yes	Pseudomonas fluorescens Pf-5		76	74
No Yes	Pseudomonas mendocina ymp		44	43
No Yes	Pseudomonas aeruginosa PAO1		61	59
No Yes	Cellvibrio japonicus Ueda107		28	27
No Yes	Psychrobacter sp. PRwf-1		24	23
No Yes	Psychrobacter arcticus 273-4		21	20
No Yes	Psychrobacter cryohalolentis K5		28	27
No Yes	Acinetobacter sp. ADP1		28	28
No Yes	Acinetobacter baumannii ATCC 17978		40	40
No Yes	Thiomicrospira crunogena XCL-2		19	19
No Yes	Francisella philomiragia ssp. philomiragia ATCC 25017		26	26
No Yes	Francisella tularensis ssp. tularensis SCHU S4		18	18
No Yes	Gloeobacter violaceus PCC 7421		27	26
No Yes	Acaryochloris marina MBIC11017		31	30
No Yes	Prochlorococcus marinus MIT 9313		29	28
No Yes	Nostoc punctiforme PCC 73102		46	45
No Yes	Nostoc sp. PCC 7120		35	34
No Yes	Anabaena variabilis ATCC 29413		40	39
No Yes	Trichodesmium erythraeum IMS101		32	31
No Yes	Thermosynechococcus elongatus BP-1		24	23
No Yes	cyanobacterium UCYN-A		15	14
No Yes	Cyanothece sp. ATCC 51142		27	26
No Yes	Synechocystis sp. PCC 6803		44	43
No Yes	Synechococcus elongatus PCC 6301		26	25
No Yes	Microcystis aeruginosa NIES-843		33	32
No Yes	Nitrosopumilus maritimus SCM1		19	19
No Yes	Candidatus Korarchaeum cryptofilum OPF8		25	25
No Yes	Methanocella paludicola SANAE		21	21
No Yes	Methanosaeta thermophila PT		14	14
No Yes	Methanococcoides burtonii DSM 6242		22	22
No Yes	Methanosarcina acetivorans C2A		23	23
No Yes	Methanosarcina mazei Go1		20	20
No Yes	Methanosarcina barkeri Fusaro		25	25
No Yes	Methanohalophilus mahii DSM 5219		21	21
No Yes	Methanosphaerula palustris E1-9c		28	28
No Yes	Candidatus Methanoregula boonei 6A8		27	27
No Yes	Methanospirillum hungatei JF-1		26	26
No Yes	Methanocorpusculum labreanum Z		19	19
No Yes	Methanoculleus marisnigri JR1		19	19
No Yes	Methanopyrus kandleri AV19		13	13
No Yes	Ferroglobus placidus DSM 10642		16	16
No Yes	Archaeoglobus profundus DSM 5631		13	13
No Yes	Archaeoglobus fulgidus DSM 4304		18	18
No Yes	Thermococcus onnurineus NA1		18	18
No Yes	Thermococcus kodakarensis KOD1		18	18
No Yes	Thermococcus gammatolerans EJ3		17	17
No Yes	Thermococcus sibiricus MM 739		22	22
No Yes	Pyrococcus horikoshii OT3		18	18
No Yes	Pyrococcus abyssi GE5		20	20
No Yes	Pyrococcus furiosus DSM 3638		21	21
No Yes	Thermoplasma volcanium GSS1		15	15
No Yes	Thermoplasma acidophilum DSM 1728		16	16
No Yes	Picrophilus torridus DSM 9790		18	18
No Yes	Haloquadratum walsbyi DSM 16790		14	14
No Yes	Halomicrobium mukohataei DSM 12286		23	23
No Yes	Halorhabdus utahensis DSM 12940		18	18
No Yes	Haloterrigena turkmenica DSM 5511		29	29
No Yes	Natronomonas pharaonis DSM 2160		20	20
No Yes	Natrialba magadii ATCC 43099		31	31
No Yes	Halorubrum lacusprofundi ATCC 49239		25	25
No Yes	Haloferax volcanii DS2		25	25
No Yes	Halobacterium salinarum R1		20	20
No Yes	Halobacterium sp. NRC-1		20	20
No Yes	Haloarcula marismortui ATCC 43049		23	23
No Yes	Methanocaldococcus sp. FS406-22		16	16
No Yes	Methanocaldococcus fervens AG86		14	14
No Yes	Methanocaldococcus vulcanius M7		16	16
No Yes	Methanocaldococcus jannaschii DSM 2661		17	17
No Yes	Methanococcus aeolicus Nankai-3		17	17
No Yes	Methanococcus maripaludis S2		16	16
No Yes	Methanococcus vannielii SB		18	18
No Yes	Methanothermobacter thermautotrophicus Delta H		15	15
No Yes	Methanosphaera stadtmanae DSM 3091		15	15
No Yes	Methanobrevibacter ruminantium M1		18	18
No Yes	Methanobrevibacter smithii ATCC 35061		19	19
No Yes	uncultured methanogenic archaeon RC-I		19	19
No Yes	Aciduliprofundum boonei T469		14	14
No Yes	Hyperthermus butylicus DSM 5456		11	11
No Yes	Aeropyrum pernix K1		21	21
No Yes	Ignicoccus hospitalis KIN4/I		8	8
No Yes	Staphylothermus marinus F1		12	12
No Yes	Desulfurococcus kamchatkensis 1221n		13	13
No Yes	Metallosphaera sedula DSM 5348		16	16
No Yes	Sulfolobus tokodaii 7		16	16
No Yes	Sulfolobus islandicus Y.N.15.51		18	18
No Yes	Sulfolobus solfataricus P2		18	18
No Yes	Sulfolobus acidocaldarius DSM 639		18	18
No Yes	Thermofilum pendens Hrk 5		8	8
No Yes	Caldivirga maquilingensis IC-167		22	22
No Yes	Pyrobaculum calidifontis JCM 11548		16	16
No Yes	Pyrobaculum arsenaticum DSM 13514		17	17
No Yes	Pyrobaculum aerophilum IM2		16	16
No Yes	Pyrobaculum islandicum DSM 4184		14	14
No Yes	Thermoproteus neutrophilus V24Sta		14	14
No Yes	Drosophila melanogaster FlyBase 5.12 (all transcripts) (FlyBase)	Fruit fly	58	57
No Yes	Caenorhabditis elegans WormBase WS194 (all transcripts) (WormBase)	Nematode	61	60
No Yes	Cryptococcus neoformans var. grubii H99		41	40
No Yes	Cryptococcus neoformans B-3501A		42	41
No Yes	Ajellomyces dermatitidis ER-3		50	49
No Yes	Histoplasma capsulatum H143		50	49
No Yes	Histoplasma capsulatum H88		49	48
No Yes	Histoplasma capsulatum G186AR		49	48
No Yes	Paracoccidioides brasiliensis Pb01		46	45
No Yes	Paracoccidioides brasiliensis Pb03		45	44
No Yes	Coccidioides posadasii str. Silveira		51	49
No Yes	Coccidioides immitis RMSCC 3703		50	49
No Yes	Coccidioides immitis RMSCC 2394		51	49
No Yes	Coccidioides immitis H538.4		53	51
No Yes	Aspergillus fumigatus A1163		61	61
No Yes	Candida albicans WO-1		39	38
No Yes	Saccharomyces cerevisiae YJM789		35	34
No Yes	Saccharomyces cerevisiae RM11-1a		34	33
No Yes	Saccharomyces cerevisiae Ensembl 49_1h (all transcripts)	Baker's yeast	35	34
No Yes	Schizosaccharomyces pombe 972h-		32	31
No Yes	Batrachochytrium dendrobatidis JAM81		38	37
No Yes	Oryza sativa ssp. Indica (Subspecies)	Indian rice	168	163
No Yes	Plasmodium falciparum HB3		10	10
No Yes	Plasmodium falciparum Dd2		8	8
No Yes	Candidatus Phytoplasma australiense		2	2
No Yes	Ureaplasma parvum ser. 3 ATCC 27815		1	1
No Yes	Mycoplasma agalactiae		2	2
No Yes	Mycoplasma hyopneumoniae 7448		2	2
No Yes	Mycoplasma hyopneumoniae J		2	2
No Yes	Leptospira borgpetersenii ser. Hardjo-bovis JB197		27	26
No Yes	Leptospira interrogans ser. Copenhageni Fiocruz L1-130		31	30
No Yes	Leptospira biflexa ser. Patoc Patoc 1 (Ames)		33	32
No Yes	Treponema pallidum ssp. pallidum SS14		6	6
No Yes	Borrelia burgdorferi ZS7		3	3
No Yes	Bifidobacterium longum ssp. infantis ATCC 15697		23	23
No Yes	Bifidobacterium longum		25	25
No Yes	Bifidobacterium animalis ssp. lactis Bl-04		21	21
No Yes	Bifidobacterium animalis ssp. lactis DSM 10140		21	21
No Yes	Frankia sp. EAN1pec		44	43
No Yes	Propionibacterium acnes SK137		22	21
No Yes	Mycobacterium sp. KMS		41	40
No Yes	Mycobacterium sp. JLS		41	40
No Yes	Mycobacterium avium 104		38	37
No Yes	Mycobacterium tuberculosis KZN 1435		37	36
No Yes	Mycobacterium tuberculosis H37Ra		37	36
No Yes	Mycobacterium tuberculosis F11		37	36
No Yes	Mycobacterium tuberculosis CDC1551		32	31
No Yes	Mycobacterium bovis BCG Tokyo 172		36	35
No Yes	Mycobacterium bovis BCG Pasteur 1173P2		36	35
No Yes	Mycobacterium leprae Br4923		21	20
No Yes	Corynebacterium glutamicum R		23	23
No Yes	Corynebacterium glutamicum ATCC 13032 Bielefeld		24	24
No Yes	Tropheryma whipplei TW08/27		7	6
No Yes	Clavibacter michiganensis ssp. sepedonicus		26	25
No Yes	Dehalococcoides sp. GT		9	9
No Yes	Dehalococcoides sp. VS		10	10
No Yes	Dehalococcoides sp. BAV1		9	9
No Yes	Chlorobium phaeobacteroides BS1		22	22
No Yes	Porphyromonas gingivalis ATCC 33277		19	18
No Yes	Bacteroides fragilis YCH46		38	37
No Yes	Salinibacter ruber		29	28
No Yes	Candidatus Sulcia muelleri DMIN		4	4
No Yes	Candidiatus Sulcia muelleri SMDSEM		4	4
No Yes	Blattabacterium sp. BPLAN		11	10
No Yes	Chlamydophila pneumoniae J138		10	10
No Yes	Chlamydophila pneumoniae CWL029		10	10
No Yes	Chlamydophila pneumoniae AR39		10	10
No Yes	Chlamydia trachomatis B/TZ1A828/OT		8	8
No Yes	Chlamydia trachomatis B/Jali20/OT		8	8
No Yes	Chlamydia trachomatis L2b/UCH-1/proctitis		8	8
No Yes	Chlamydia trachomatis 434/Bu		8	8
No Yes	Chlamydia trachomatis A/HAR-13		8	8
No Yes	Thermus thermophilus HB8		21	21
No Yes	Desulfitobacterium hafniense DCB-2		36	36
No Yes	Clostridium kluyveri NBRC 12016		42	42
No Yes	Clostridium perfringens SM101		23	23
No Yes	Clostridium perfringens ATCC 13124		24	24
No Yes	Clostridium difficile R20291		46	46
No Yes	Clostridium difficile CD196		46	46
No Yes	Clostridium botulinum F Langeland		42	42
No Yes	Clostridium botulinum E3 Alaska E43		25	25
No Yes	Clostridium botulinum B1 Okra		44	44
No Yes	Clostridium botulinum Ba4 657		40	40
No Yes	Clostridium botulinum B Eklund 17B		27	27
No Yes	Clostridium botulinum A2 Kyoto		43	43
No Yes	Clostridium botulinum A3 Loch Maree		44	44
No Yes	Clostridium botulinum A Hall		42	42
No Yes	Clostridium botulinum A ATCC 19397		42	42
No Yes	Lactobacillus casei BL23		19	19
No Yes	Lactobacillus rhamnosus Lc 705		19	19
No Yes	Lactobacillus johnsonii FI9785		8	8
No Yes	Lactobacillus reuteri JCM 1112		18	18
No Yes	Lactobacillus plantarum JDM1		25	25
No Yes	Lactobacillus delbrueckii ssp. bulgaricus ATCC BAA-365		11	11
No Yes	Lactococcus lactis ssp. lactis KF147		18	18
No Yes	Lactococcus lactis ssp. cremoris MG1363		17	17
No Yes	Lactococcus lactis ssp. cremoris SK11		14	14
No Yes	Streptococcus equi ssp. equi 4047		8	8
No Yes	Streptococcus equi ssp. zooepidemicus		8	8
No Yes	Streptococcus pyogenes MGAS10750		8	8
No Yes	Streptococcus pyogenes MGAS10270		8	8
No Yes	Streptococcus pyogenes MGAS2096		9	9
No Yes	Streptococcus pyogenes MGAS9429		8	8
No Yes	Streptococcus pyogenes MGAS6180		8	8
No Yes	Streptococcus pyogenes NZ131		8	8
No Yes	Streptococcus pyogenes MGAS8232		8	8
No Yes	Streptococcus pyogenes MGAS10394		8	8
No Yes	Streptococcus pyogenes Manfredo		8	8
No Yes	Streptococcus pyogenes MGAS315		8	8
No Yes	Streptococcus pyogenes SSI-1		8	8
No Yes	Streptococcus pyogenes MGAS5005		8	8
No Yes	Streptococcus pneumoniae ATCC 700669		12	12
No Yes	Streptococcus pneumoniae CGSP14		13	13
No Yes	Streptococcus pneumoniae G54		14	14
No Yes	Streptococcus pneumoniae P1031		12	12
No Yes	Streptococcus pneumoniae JJA		12	12
No Yes	Streptococcus pneumoniae 70585		13	13
No Yes	Streptococcus pneumoniae Hungary19A-6		12	12
No Yes	Streptococcus pneumoniae Taiwan19F-14		12	12
No Yes	Streptococcus pneumoniae D39		13	13
No Yes	Streptococcus pneumoniae R6 (Non-virulent)		13	13
No Yes	Streptococcus agalactiae A909		10	10
No Yes	Streptococcus agalactiae 2603V/R		10	10
No Yes	Streptococcus mutans NN2025		16	16
No Yes	Streptococcus thermophilus LMD-9		17	17
No Yes	Streptococcus thermophilus CNRZ1066 (Younger strain)		18	18
No Yes	Streptococcus suis BM407		16	16
No Yes	Streptococcus suis SC84		16	16
No Yes	Streptococcus suis 98HAH33		18	18
No Yes	Streptococcus suis P1/7		16	16
No Yes	Listeria monocytogenes 08-5578		28	28
No Yes	Listeria monocytogenes 08-5923		28	28
No Yes	Listeria monocytogenes Clip80459		27	27
No Yes	Listeria monocytogenes HCC23		27	27
No Yes	Listeria monocytogenes 4b F2365		27	27
No Yes	Geobacillus sp. Y412MC61		36	36
No Yes	Geobacillus sp. Y412MC10		51	51
No Yes	Bacillus licheniformis ATCC 14580		46	46
No Yes	Bacillus cytotoxicus NVH 391-98		40	40
No Yes	Bacillus thuringiensis Al Hakam		53	53
No Yes	Bacillus cereus 03BB102		53	53
No Yes	Bacillus cereus AH820		51	51
No Yes	Bacillus cereus AH187		49	49
No Yes	Bacillus cereus B4264		49	49
No Yes	Bacillus cereus G9842		54	54
No Yes	Bacillus cereus Q1		49	49
No Yes	Bacillus cereus E33L		50	50
No Yes	Bacillus cereus ATCC 10987		50	50
No Yes	Bacillus anthracis A0248		49	49
No Yes	Bacillus anthracis CDC 684		52	52
No Yes	Bacillus anthracis Sterne		52	52
No Yes	Bacillus anthracis Ames		49	49
No Yes	Bacillus megaterium DSM319		58	58
No Yes	Staphylococcus epidermidis ATCC 12228		26	26
No Yes	Staphylococcus aureus RF122		27	27
No Yes	Staphylococcus aureus ssp. aureus ED98		28	28
No Yes	Staphylococcus aureus ssp. aureus Newman		28	28
No Yes	Staphylococcus aureus ssp. aureus Mu3		28	28
No Yes	Staphylococcus aureus ssp. aureus USA300_TCH1516		26	26
No Yes	Staphylococcus aureus ssp. aureus USA300_FPR3757		28	28
No Yes	Staphylococcus aureus ssp. aureus JH1		28	28
No Yes	Staphylococcus aureus ssp. aureus JH9		28	28
No Yes	Staphylococcus aureus ssp. aureus MSSA476		27	27
No Yes	Staphylococcus aureus ssp. aureus MRSA252		28	28
No Yes	Staphylococcus aureus ssp. aureus MW2		27	27
No Yes	Staphylococcus aureus ssp. aureus N315		28	28
No Yes	Staphylococcus aureus ssp. aureus Mu50		28	28
No Yes	Staphylococcus aureus ssp. aureus COL		28	28
No Yes	Campylobacter jejuni RM1221		18	18
No Yes	Campylobacter jejuni ssp. jejuni 81116		17	17
No Yes	Campylobacter jejuni ssp. jejuni 81-176		17	17
No Yes	Campylobacter jejuni ssp. doylei 269.97		19	19
No Yes	Helicobacter pylori B38		12	12
No Yes	Helicobacter pylori P12		12	12
No Yes	Helicobacter pylori G27		12	12
No Yes	Helicobacter pylori Shi470		12	12
No Yes	Helicobacter pylori HPAG1		12	12
No Yes	Helicobacter pylori J99		12	12
No Yes	Desulfovibrio vulgaris DP4		34	34
No Yes	Desulfovibrio vulgaris Miyazaki F		30	30
No Yes	Desulfovibrio desulfuricans ssp. desulfuricans ATCC 27774		25	25
No Yes	Geobacter sp. M21		34	34
No Yes	Anaeromyxobacter sp. K		35	35
No Yes	Anaeromyxobacter dehalogenans 2CP-1		34	34
No Yes	Azoarcus sp. BH72		35	34
No Yes	Neisseria meningitidis alpha14		18	17
No Yes	Neisseria meningitidis 053442		18	17
No Yes	Neisseria meningitidis FAM18		18	17
No Yes	Neisseria meningitidis MC58		16	16
No Yes	Neisseria gonorrhoeae NCCP11945		18	17
No Yes	Ralstonia eutropha H16		59	58
No Yes	Ralstonia pickettii 12D		43	42
No Yes	Polynucleobacter necessarius ssp. necessarius STIR1		13	13
No Yes	Burkholderia sp. CCGE1002		69	68
No Yes	Burkholderia pseudomallei MSHR346		37	36
No Yes	Burkholderia pseudomallei 1106a		75	74
No Yes	Burkholderia pseudomallei 668		75	74
No Yes	Burkholderia pseudomallei 1710b		74	73
No Yes	Burkholderia mallei NCTC 10229		63	62
No Yes	Burkholderia mallei NCTC 10247		64	63
No Yes	Burkholderia mallei SAVP1		58	57
No Yes	Burkholderia ambifaria MC40-6		79	78
No Yes	Burkholderia cenocepacia MC0-3		78	77
No Yes	Burkholderia cenocepacia HI2424		80	79
No Yes	Burkholderia cenocepacia J2315		77	76
No Yes	Burkholderia multivorans ATCC 17616		72	71
No Yes	Caulobacter crescentus NA1000		35	35
No Yes	Zymomonas mobilis ssp. mobilis NCIMB 11163		23	23
No Yes	Rhodobacter sphaeroides KD131		47	46
No Yes	Rhodobacter sphaeroides ATCC 17025		37	36
No Yes	Rhodobacter sphaeroides ATCC 17029		45	44
No Yes	Gluconacetobacter diazotrophicus PAl 5		38	37
No Yes	Ehrlichia ruminantium Gardel		8	8
No Yes	Ehrlichia ruminantium Welgevonden		8	8
No Yes	Anaplasma marginale Florida		9	9
No Yes	Orientia tsutsugamushi Ikeda		5	5
No Yes	Rickettsia bellii OSU 85-389		5	5
No Yes	Rickettsia rickettsii Iowa		5	5
No Yes	Methylobacterium extorquens DM4		42	41
No Yes	Methylobacterium extorquens AM1		40	39
No Yes	Brucella suis ATCC 23445		32	31
No Yes	Brucella melitensis ATCC 23457		32	31
No Yes	Brucella abortus S19		34	33
No Yes	Brucella melitensis biov. Abortus 2308		33	32
No Yes	Rhizobium etli CIAT 652		38	37
No Yes	Rhizobium leguminosarum bv. trifolii WSM2304		36	35
No Yes	Rhizobium leguminosarum bv. trifolii WSM1325		36	35
No Yes	Rhodopseudomonas palustris TIE-1		48	47
No Yes	Rhodopseudomonas palustris HaA2		42	41
No Yes	Rhodopseudomonas palustris BisB5		39	38
No Yes	Rhodopseudomonas palustris BisB18		38	37
No Yes	Rhodopseudomonas palustris BisA53		37	36
No Yes	Bradyrhizobium sp. BTAi1		58	57
No Yes	Acidithiobacillus ferrooxidans ATCC 53993		22	22
No Yes	Haemophilus somnus 2336		15	15
No Yes	Haemophilus influenzae PittGG		14	14
No Yes	Haemophilus influenzae PittEE		15	15
No Yes	Haemophilus influenzae 86-028NP		17	17
No Yes	Actinobacillus pleuropneumoniae ser. 3 JL03		20	20
No Yes	Actinobacillus pleuropneumoniae ser. 7 AP76		20	20
No Yes	Vibrio fischeri MJ11		31	30
No Yes	Vibrio vulnificus CMCP6 (Poor annotation)		42	40
No Yes	Vibrio cholerae M66-2		35	33
No Yes	Vibrio cholerae O395		35	33
No Yes	Vibrio cholerae MJ-1236		35	33
No Yes	Shewanella sp. W3-18-1		32	31
No Yes	Shewanella sp. ANA-3		31	30
No Yes	Shewanella baltica OS223		33	32
No Yes	Shewanella baltica OS185		33	32
No Yes	Shewanella baltica OS195		35	34
No Yes	Shewanella sp. MR-4		30	29
No Yes	Stenotrophomonas maltophilia K279a		32	31
No Yes	Xylella fastidiosa M23		14	13
No Yes	Xylella fastidiosa M12		14	13
No Yes	Xylella fastidiosa Temecula1		14	13
No Yes	Xanthomonas campestris pv. vesicatoria 85-10 (Completed 2005)		33	32
No Yes	Xanthomonas oryzae pv. oryzae PXO99A		30	29
No Yes	Xanthomonas oryzae pv. oryzae MAFF 311018		32	31
No Yes	Xanthomonas campestris pv. campestris B100		37	36
No Yes	Xanthomonas campestris pv. campestris 8004 (Completed 2005)		35	34
No Yes	Thioalkalivibrio sp. K90mix		20	20
No Yes	Coxiella burnetii CbuK_Q154		18	18
No Yes	Coxiella burnetii CbuG_Q212		18	18
No Yes	Coxiella burnetii Dugway 5J108-111		19	19
No Yes	Coxiella burnetii RSA 331		17	17
No Yes	Legionella pneumophila Corby		22	22
No Yes	Legionella pneumophila Paris		22	22
No Yes	Legionella pneumophila Lens		23	23
No Yes	Dickeya dadantii Ech586		45	44
No Yes	Candidatus Blochmannia pennsylvanicus BPEN		8	8
No Yes	Buchnera aphidicola Cc		4	4
No Yes	Buchnera aphidicola Bp		6	6
No Yes	Buchnera aphidicola Tuc7		5	5
No Yes	Buchnera aphidicola 5A		6	6
No Yes	Buchnera aphidicola Sg		6	6
No Yes	Yersinia pseudotuberculosis PB1/+		42	41
No Yes	Yersinia pseudotuberculosis YPIII		41	40
No Yes	Yersinia pseudotuberculosis IP 31758		41	40
No Yes	Yersinia pestis Z176003		37	36
No Yes	Yersinia pestis Pestoides F		42	41
No Yes	Yersinia pestis Nepal516		37	36
No Yes	Yersinia pestis Antiqua		41	40
No Yes	Yersinia pestis Angola		40	39
No Yes	Yersinia pestis biov. Microtus 91001		38	37
No Yes	Yersinia pestis KIM		37	36
No Yes	Shigella flexneri 5 8401		37	36
No Yes	Shigella flexneri 2a 301		38	37
No Yes	Shigella boydii CDC 3083-94		33	32
No Yes	Salmonella enterica ssp. arizonae ser. 62:z4,z23:--		39	38
No Yes	Salmonella enterica ssp. enterica ser. Schwarzengrund CVM19633		43	43
No Yes	Salmonella enterica ssp. enterica ser. Enteritidis P125109		44	43
No Yes	Salmonella enterica ssp. enterica ser. Choleraesuis str. SC-B67		40	39
No Yes	Salmonella enterica ssp. enterica ser. Newport SL254		43	42
No Yes	Salmonella enterica ssp. enterica ser. Dublin CT_02021853		43	42
No Yes	Salmonella enterica ssp. enterica ser. Typhi CT18		42	41
No Yes	Salmonella enterica ssp. enterica ser. Typhi Ty2		42	41
No Yes	Salmonella enterica ssp. enterica ser. Agona SL483		45	44
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi C RKS4594		42	41
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi B SPB7		44	43
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi A AKU_12601		43	42
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi A ATCC 9150		43	42
No Yes	Salmonella enterica ssp. enterica ser. Heidelberg SL476		43	42
No Yes	Salmonella enterica ssp. enterica ser. Gallinarum 287/91		42	41
No Yes	Klebsiella pneumoniae 342		60	59
No Yes	Klebsiella pneumoniae NTUH-K2044		54	53
No Yes	Escherichia coli ED1a		43	42
No Yes	Escherichia coli IAI39		44	43
No Yes	Escherichia coli UMN026		42	41
No Yes	Escherichia coli 55989		42	41
No Yes	Escherichia coli S88		43	42
No Yes	Escherichia coli IAI1		43	42
No Yes	Escherichia coli BL21		41	40
No Yes	Escherichia coli ATCC 8739		42	41
No Yes	Escherichia coli BL21(DE3)		40	39
No Yes	Escherichia coli SMS-3-5		44	43
No Yes	Escherichia coli SE11		42	41
No Yes	Escherichia coli APEC O1		43	42
No Yes	Escherichia coli O103:H2 12009		43	42
No Yes	Escherichia coli UTI89		44	43
No Yes	Escherichia coli 536		44	43
No Yes	Escherichia coli HS		41	40
No Yes	Escherichia coli E24377A		42	41
No Yes	Escherichia coli O55:H7 CB9615		43	42
No Yes	Escherichia coli O26:H11 11368		43	42
No Yes	Escherichia coli CFT073		44	43
No Yes	Escherichia coli O111:H- 11128		44	43
No Yes	Escherichia coli O127:H6 E2348/69		41	40
No Yes	Escherichia coli O157:H7 EDL933		42	41
No Yes	Escherichia coli O157:H7 TW14359		42	41
No Yes	Escherichia coli O157:H7 EC4115		42	41
No Yes	Escherichia coli O157:H7 Sakai		42	41
No Yes	Escherichia coli BW2952		41	40
No Yes	Escherichia coli K-12 subW3110		41	40
No Yes	Escherichia coli K-12 subDH10B		39	38
No Yes	Escherichia coli B REL606		41	40
No Yes	Erwinia amylovora CFBP1430		42	41
No Yes	Pseudomonas syringae pv. phaseolicola 1448A		49	48
No Yes	Pseudomonas syringae pv. syringae B728a		50	49
No Yes	Pseudomonas putida W619		58	56
No Yes	Pseudomonas putida F1		65	63
No Yes	Pseudomonas putida GB-1		64	61
No Yes	Pseudomonas fluorescens SBW25		69	68
No Yes	Pseudomonas fluorescens Pf0-1		60	58
No Yes	Pseudomonas aeruginosa LESB58		60	58
No Yes	Pseudomonas aeruginosa PA7		61	59
No Yes	Pseudomonas aeruginosa UCBPP-PA14		60	58
No Yes	Acinetobacter baumannii AB307-0294		36	36
No Yes	Acinetobacter baumannii AYE		32	32
No Yes	Acinetobacter baumannii SDF		24	24
No Yes	Acinetobacter baumannii AB0057		32	32
No Yes	Acinetobacter baumannii ACICU		34	34
No Yes	Francisella novicida U112		20	20
No Yes	Francisella tularensis ssp. mediasiatica FSC147		17	17
No Yes	Francisella tularensis ssp. holarctica FTNF002-00		17	17
No Yes	Francisella tularensis ssp. holarctica OSU18		17	17
No Yes	Francisella tularensis ssp. holarctica		21	21
No Yes	Francisella tularensis ssp. tularensis WY96-3418		19	19
No Yes	Francisella tularensis ssp. tularensis FSC198		18	18
No Yes	Prochlorococcus marinus NATL1A		24	23
No Yes	Prochlorococcus marinus MIT 9301		26	25
No Yes	Prochlorococcus marinus MIT 9515		27	26
No Yes	Prochlorococcus marinus AS9601		25	24
No Yes	Prochlorococcus marinus ssp. marinus CCMP1375		25	24
No Yes	Prochlorococcus marinus ssp. pastoris CCMP1986		27	26
No Yes	Prochlorococcus marinus MIT 9215		26	25
No Yes	Prochlorococcus marinus MIT 9211		26	25
No Yes	Prochlorococcus marinus MIT 9312		25	24
No Yes	Prochlorococcus marinus MIT 9303		28	27
No Yes	Prochlorococcus marinus NATL2A		25	24
No Yes	Cyanothece sp. PCC 8802		27	26
No Yes	Cyanothece sp. PCC 7425		27	26
No Yes	Cyanothece sp. PCC 7424		28	27
No Yes	Cyanothece sp. PCC 8801		27	26
No Yes	Synechococcus sp. JA-2-3Ba(2-13) (Poor annotation)		23	22
No Yes	Synechococcus sp. JA-3-3Ab (Poor annotation)		21	20
No Yes	Synechococcus sp. CC9902 (Poor annotation)		27	26
No Yes	Synechococcus sp. RCC307		25	24
No Yes	Synechococcus sp. CC9605 (Poor annotation)		25	24
No Yes	Synechococcus sp. WH 8102 (Good annotation)		26	25
No Yes	Synechococcus sp. CC9311		27	26
No Yes	Synechococcus sp. WH 7803		25	24
No Yes	Synechococcus sp. PCC 7002		22	21
No Yes	Synechococcus elongatus PCC 7942		26	25
No Yes	Methanococcus maripaludis C6		15	15
No Yes	Methanococcus maripaludis C7		15	15
No Yes	Methanococcus maripaludis C5		17	17
No Yes	Sulfolobus islandicus Y.G.57.14		18	18
No Yes	Sulfolobus islandicus L.S.2.15		19	19
No Yes	Sulfolobus islandicus M.16.27		17	17
No Yes	Sulfolobus islandicus M.14.25		18	18
No Yes	Sulfolobus islandicus M.16.4		18	18
No Yes	Sulfolobus islandicus L.D.8.5		20	20
No Yes	Ailuropoda melanoleuca (Draft)	Giant panda	46	45
No Yes	Moniliophthora perniciosa FA553 (Genome survey)		45	45
No Yes	Lotus japonicus (Early assembly)		18	17
No Yes	Prunus persica (Early draft)	Peach	106	104
No Yes	Manihot esculenta (Early draft)	Cassava	159	158
No Yes	Ricinus communis (Early assembly)	Castor bean	110	109
No Yes	Mimulus guttatus (Early draft)	Spotted monkey flower	114	110
No Yes	Phoenix dactylifera (Early draft)	Date palm	80	79
No Yes	Trypanosoma vivax (Parial)		17	17
No Yes	Trypanosoma congolense (Partial)		22	21
No Yes	Toxoplasma gondii GT1 (Early assembly)		20	20
No Yes	Toxoplasma gondii VEG (Early assembly)		20	20
No Yes	Toxoplasma gondii RH (Archived)		18	18
No Yes	Homo sapiens 49_36k (longest transcript per gene)	Human	44	43
No Yes	Pan troglodytes 49_21h (longest transcript per gene)	Chimpanzee	43	42
No Yes	Gorilla gorilla 52_1 (longest transcript per gene)	Western Gorilla	41	40
No Yes	Pongo pygmaeus 49_1 (longest transcript per gene)	Bornean orangutan	46	45
No Yes	Macaca mulatta 49_10h (longest transcript per gene)	Rhesus monkey	47	46
No Yes	Callithrix jacchus 56_3 (longest transcript per gene)	White-tufted-ear marmoset	43	42
No Yes	Otolemur garnettii 49_1c (longest transcript per gene)	Small-eared galago	40	40
No Yes	Microcebus murinus 49_1 (longest transcript per gene)	Gray mouse lemur	40	39
No Yes	Tarsius syrichta 51_1 (longest transcript per gene)	Philippine tarsier	37	35
No Yes	Rattus norvegicus 49_34s (longest transcript per gene)	Norway rat	40	39
No Yes	Mus musculus 49_37b (longest transcript per gene)	House mouse	43	42
No Yes	Spermophilus tridecemlineatus 49_1e (longest transcript per gene)	Thirteen-lined ground squirrel	38	37
No Yes	Dipodomys ordii 51_1 (longest transcript per gene)	Ord's kangaroo rat	41	40
No Yes	Cavia porcellus 51_3 (longest transcript per gene)	Domestic guinea pig	42	41
No Yes	Oryctolagus cuniculus 49_1f (longest transcript per gene)	Rabbit	36	35
No Yes	Ochotona princeps 49_1 (longest transcript per gene)	American pika	44	43
No Yes	Tupaia belangeri 49_1d (longest transcript per gene)	Northern tree shrew	39	38
No Yes	Sus scrofa 56_9 (longest transcript per gene)	Pig	42	41
No Yes	Bos taurus 49_3f (longest transcript per gene)	Cattle	47	46
No Yes	Vicugna pacos 51_1 (longest transcript per gene)	Alpaca	34	33
No Yes	Tursiops truncatus 51_1 (longest transcript per gene)	Bottlenosed dolphin	43	42
No Yes	Canis familiaris 49_2g (longest transcript per gene)	Dog	44	43
No Yes	Felis catus 49_1c (longest transcript per gene)	Domestic cat	38	37
No Yes	Equus caballus 49_2 (longest transcript per gene)	Horse	46	45
No Yes	Myotis lucifugus 49_1e (longest transcript per gene)	Little brown bat	41	40
No Yes	Pteropus vampyrus 51_1 (longest transcript per gene)	Large flying fox	41	40
No Yes	Sorex araneus 49_1c (longest transcript per gene)	European shrew	35	34
No Yes	Erinaceus europaeus 49_1c (longest transcript per gene)	Western European hedgehog	39	38
No Yes	Procavia capensis 51_1 (longest transcript per gene)	Cape rock hyrax	40	39
No Yes	Loxodonta africana 49_1d (longest transcript per gene)	African savanna elephant	34	33
No Yes	Echinops telfairi 49_1e (longest transcript per gene)	Small Madagascar hedgehog	41	40
No Yes	Dasypus novemcinctus 49_1f (longest transcript per gene)	Nine-banded armadillo	34	33
No Yes	Macropus eugenii 55_1 (longest transcript per gene)	Tammar wallaby	41	41
No Yes	Monodelphis domestica 49_5d (longest transcript per gene)	Gray short-tailed opossum	43	42
No Yes	Ornithorhynchus anatinus 49_1f (longest transcript per gene)	Platypus	44	44
No Yes	Anolis carolinensis 55_1a (longest transcript per gene)	Green anole	47	46
No Yes	Taeniopygia guttata 57_1c (longest transcript per gene)	Zebra finch	43	42
No Yes	Meleagris gallopavo 57_2 (longest transcript per gene)	Turkey	40	40
No Yes	Gallus gallus 49_2g (longest transcript per gene)	Chicken	40	39
No Yes	Xenopus tropicalis 49_41i (longest transcript per gene)	Western clawed frog	45	44
No Yes	Danio rerio 49_7c (longest transcript per gene)	Zebrafish	46	45
No Yes	Gasterosteus aculeatus 49_1f (longest transcript per gene)	Three-spined stickleback	50	49
No Yes	Oryzias latipes 49_1e (longest transcript per gene)	Japanese medaka	47	46
No Yes	Tetraodon nigroviridis 49_1k (longest transcript per gene)	Spotted green pufferfish	55	53
No Yes	Takifugu rubripes 49_4i (longest transcript per gene)	Torafugu	49	48
No Yes	Ciona savignyi 49_2f (longest transcript per gene)		54	53
No Yes	Ciona intestinalis 49_2i (longest transcript per gene)		57	57
No Yes	Apis mellifera 37.2d (longest transcript per gene) (Not maintained)	Honey bee	44	43
No Yes	Drosophila melanogaster FlyBase 5.12 (longest transcript per gene) (FlyBase)	Fruit fly	58	57
No Yes	Drosophila melanogaster Ensembl 49_54 (longest transcript per gene)	Fruit fly	35	34
No Yes	Aedes aegypti 49_1b (longest transcript per gene)	Yellow fever mosquito	47	45
No Yes	Anopheles gambiae 49_3j (longest transcript per gene)	African malaria mosquito	36	36
No Yes	Caenorhabditis elegans WormBase WS194 (longest transcript per gene) (WormBase)	Nematode	43	42
No Yes	Caenorhabditis elegans Ensembl 49_180a (longest transcript per gene)	Nematode	43	42
No Yes	Arabidopsis thaliana 9 (longest transcript per gene)	Thale cress	97	95
No Yes	Oryza sativa ssp. japonica 5.0 (Not transposons)	Japanese rice	162	157
No Yes	NCBI viral sequences (Viral)		22	20
No Yes	PDB chains (SCOP 1.73) (PDB)		159	159
No Yes	TargetDB (Targets)		961	957
No Yes	UniProt 15.0 (UniProt)		47737	46967
No Yes	UniProt 15.0 viral sequences (Viral)		25	24