alpha/beta-Hydrolases superfamily domain assignments
in
Saccharomyces cerevisiae SGD

Select to display	Genome		Domains	Proteins
No Yes	ALL		148761	148761
No Yes	Homo sapiens 49_36k (all transcripts)	Human	277	277
No Yes	Pan troglodytes 49_21h (all transcripts)	Chimpanzee	208	207
No Yes	Gorilla gorilla 52_1 (all transcripts)	Western Gorilla	112	110
No Yes	Pongo pygmaeus 49_1 (all transcripts)	Bornean orangutan	142	141
No Yes	Macaca mulatta 49_10h (all transcripts)	Rhesus monkey	204	203
No Yes	Callithrix jacchus 56_3 (all transcripts)	White-tufted-ear marmoset	234	232
No Yes	Otolemur garnettii 49_1c (all transcripts)	Small-eared galago	109	108
No Yes	Microcebus murinus 49_1 (all transcripts)	Gray mouse lemur	105	104
No Yes	Tarsius syrichta 51_1 (all transcripts)	Philippine tarsier	87	87
No Yes	Rattus norvegicus 49_34s (all transcripts)	Norway rat	213	210
No Yes	Mus musculus 49_37b (all transcripts)	House mouse	218	217
No Yes	Spermophilus tridecemlineatus 49_1e (all transcripts)	Thirteen-lined ground squirrel	103	101
No Yes	Dipodomys ordii 51_1 (all transcripts)	Ord's kangaroo rat	119	116
No Yes	Cavia porcellus 51_3 (all transcripts)	Domestic guinea pig	124	122
No Yes	Oryctolagus cuniculus 49_1f (all transcripts)	Rabbit	119	118
No Yes	Ochotona princeps 49_1 (all transcripts)	American pika	115	114
No Yes	Tupaia belangeri 49_1d (all transcripts)	Northern tree shrew	92	91
No Yes	Sus scrofa 56_9 (all transcripts)	Pig	92	92
No Yes	Bos taurus 49_3f (all transcripts)	Cattle	157	157
No Yes	Vicugna pacos 51_1 (all transcripts)	Alpaca	79	79
No Yes	Tursiops truncatus 51_1 (all transcripts)	Bottlenosed dolphin	114	113
No Yes	Canis familiaris 49_2g (all transcripts)	Dog	169	169
No Yes	Felis catus 49_1c (all transcripts)	Domestic cat	91	90
No Yes	Equus caballus 49_2 (all transcripts)	Horse	131	130
No Yes	Myotis lucifugus 49_1e (all transcripts)	Little brown bat	94	94
No Yes	Pteropus vampyrus 51_1 (all transcripts)	Large flying fox	110	110
No Yes	Sorex araneus 49_1c (all transcripts)	European shrew	85	84
No Yes	Erinaceus europaeus 49_1c (all transcripts)	Western European hedgehog	97	96
No Yes	Procavia capensis 51_1 (all transcripts)	Cape rock hyrax	108	108
No Yes	Loxodonta africana 49_1d (all transcripts)	African savanna elephant	94	93
No Yes	Echinops telfairi 49_1e (all transcripts)	Small Madagascar hedgehog	97	95
No Yes	Dasypus novemcinctus 49_1f (all transcripts)	Nine-banded armadillo	98	98
No Yes	Macropus eugenii 55_1 (all transcripts)	Tammar wallaby	118	116
No Yes	Monodelphis domestica 49_5d (all transcripts)	Gray short-tailed opossum	215	215
No Yes	Ornithorhynchus anatinus 49_1f (all transcripts)	Platypus	154	154
No Yes	Anolis carolinensis 55_1a (all transcripts)	Green anole	128	127
No Yes	Taeniopygia guttata 57_1c (all transcripts)	Zebra finch	110	110
No Yes	Meleagris gallopavo 57_2 (all transcripts)	Turkey	111	111
No Yes	Gallus gallus 49_2g (all transcripts)	Chicken	123	123
No Yes	Xenopus laevis	African clawed frog	221	218
No Yes	Xenopus tropicalis 49_41i (all transcripts)	Western clawed frog	160	160
No Yes	Danio rerio 49_7c (all transcripts)	Zebrafish	180	177
No Yes	Gasterosteus aculeatus 49_1f (all transcripts)	Three-spined stickleback	203	202
No Yes	Oryzias latipes 49_1e (all transcripts)	Japanese medaka	180	179
No Yes	Tetraodon nigroviridis 49_1k (all transcripts)	Spotted green pufferfish	144	143
No Yes	Takifugu rubripes 49_4i (all transcripts)	Torafugu	362	362
No Yes	Branchiostoma floridae 1.0	Florida lancelet	589	574
No Yes	Ciona savignyi 49_2f (all transcripts)		140	140
No Yes	Ciona intestinalis 49_2i (all transcripts)		133	133
No Yes	Strongylocentrotus purpuratus	Purple sea urchin	424	410
No Yes	Helobdella robusta		92	92
No Yes	Capitella sp. I		187	184
No Yes	Bombyx mori	Domestic silkworm	221	219
No Yes	Nasonia vitripennis	Jewel wasp	146	141
No Yes	Apis mellifera 37.2d (all transcripts) (Not maintained)	Honey bee	243	241
No Yes	Drosophila grimshawi 1.3		169	168
No Yes	Drosophila willistoni 1.3		168	166
No Yes	Drosophila pseudoobscura 2.3		171	165
No Yes	Drosophila persimilis 1.3		163	160
No Yes	Drosophila yakuba 1.3		167	164
No Yes	Drosophila simulans 1.3		152	151
No Yes	Drosophila sechellia 1.3		163	161
No Yes	Drosophila melanogaster Ensembl 49_54 (all transcripts)	Fruit fly	214	212
No Yes	Drosophila erecta 1.3		161	159
No Yes	Drosophila ananassae 1.3		164	161
No Yes	Drosophila virilis 1.2		162	160
No Yes	Drosophila mojavensis 1.3		169	163
No Yes	Aedes aegypti 49_1b (all transcripts)	Yellow fever mosquito	240	238
No Yes	Culex pipiens quinquefasciatus	Southern house mosquito	256	254
No Yes	Anopheles gambiae 49_3j (all transcripts)	African malaria mosquito	164	159
No Yes	Tribolium castaneum 3.0	Red flour beetle	190	183
No Yes	Pediculus humanus corporis (Early assembly)	Human body louse	93	93
No Yes	Acyrthosiphon pisum	Pea aphid	125	123
No Yes	Daphnia pulex	Common water flea	160	158
No Yes	Ixodes scapularis (Preliminary)	Black-legged tick	240	240
No Yes	Lottia gigantea		145	144
No Yes	Pristionchus pacificus		335	310
No Yes	Meloidogyne incognita	Southern root-knot nematode	119	117
No Yes	Meloidogyne hapla		84	84
No Yes	Brugia malayi	Agent of lymphatic filariasis	32	32
No Yes	Caenorhabditis japonica		159	154
No Yes	Caenorhabditis brenneri		137	133
No Yes	Caenorhabditis remanei		231	218
No Yes	Caenorhabditis elegans Ensembl 49_180a (all transcripts)	Nematode	258	248
No Yes	Caenorhabditis briggsae 2		206	188
No Yes	Schistosoma mansoni		59	58
No Yes	Nematostella vectensis 1.0	Starlet sea anemone	136	136
No Yes	Hydra magnipapillata		78	77
No Yes	Trichoplax adhaerens		144	143
No Yes	Proterospongia sp. ATCC 50818		103	100
No Yes	Monosiga brevicollis		97	93
No Yes	Capsaspora owczarzaki ATCC 30864		79	77
No Yes	Malassezia globosa CBS 7966		68	68
No Yes	Ustilago maydis		130	128
No Yes	Puccinia graminis f. sp. tritici CRL 75-36-700-3		106	106
No Yes	Melampsora laricis-populina		150	150
No Yes	Sporobolomyces roseus IAM 13481		71	70
No Yes	Serpula lacrymans var. lacrymans S7.9		178	176
No Yes	Coprinopsis cinerea okayama7 130		161	159
No Yes	Pleurotus ostreatus	Oyster mushroom	206	205
No Yes	Laccaria bicolor S238N-H82		128	126
No Yes	Agaricus bisporus var. bisporus		158	157
No Yes	Schizophyllum commune		197	196
No Yes	Heterobasidion annosum		145	144
No Yes	Phanerochaete chrysosporium RP-78 2.1		171	171
No Yes	Postia placenta		262	258
No Yes	Tremella mesenterica		62	62
No Yes	Cryptococcus neoformans JEC21		64	64
No Yes	Magnaporthe grisea 70-15		235	235
No Yes	Podospora anserina		211	210
No Yes	Sporotrichum thermophile ATCC 42464		139	135
No Yes	Thielavia terrestris NRRL 8126		159	156
No Yes	Chaetomium globosum CBS 148.51		229	222
No Yes	Neurospora tetrasperma		134	130
No Yes	Neurospora discreta FGSC 8579		130	127
No Yes	Neurospora crassa OR74A		133	130
No Yes	Cryphonectria parasitica	Chestnut blight fungus	251	249
No Yes	Fusarium oxysporum f. sp. lycopersici 4286		373	371
No Yes	Nectria haematococca mpVI		386	381
No Yes	Fusarium verticillioides 7600		312	310
No Yes	Fusarium graminearum		267	266
No Yes	Trichoderma atroviride		248	244
No Yes	Trichoderma reesei 1.2		175	173
No Yes	Trichoderma virens Gv29-8		289	284
No Yes	Verticillium dahliae VdLs.17		203	200
No Yes	Verticillium albo-atrum VaMs.102		187	184
No Yes	Botrytis cinerea B05.10		229	229
No Yes	Sclerotinia sclerotiorum		189	187
No Yes	Alternaria brassicicola		183	178
No Yes	Pyrenophora tritici-repentis		199	196
No Yes	Cochliobolus heterostrophus		213	212
No Yes	Stagonospora nodorum		272	269
No Yes	Mycosphaerella fijiensis CIRAD86		209	206
No Yes	Mycosphaerella graminicola IPO323		206	204
No Yes	Ajellomyces dermatitidis SLH14081		106	106
No Yes	Histoplasma capsulatum class NAmI strain WU24		94	92
No Yes	Microsporum gypseum		133	131
No Yes	Arthroderma benhamiae CBS 112371		117	115
No Yes	Microsporum canis CBS 113480		139	136
No Yes	Trichophyton equinum CBS 127.97		124	121
No Yes	Trichophyton verrucosum HKI 0517		120	117
No Yes	Trichophyton tonsurans CBS 112818		121	119
No Yes	Trichophyton rubrum CBS 118892		121	121
No Yes	Paracoccidioides brasiliensis Pb18		93	90
No Yes	Coccidioides posadasii RMSCC 3488		112	110
No Yes	Coccidioides immitis RS		111	109
No Yes	Uncinocarpus reesii 1704		93	92
No Yes	Aspergillus fumigatus Af293		181	178
No Yes	Neosartorya fischeri NRRL 181		209	206
No Yes	Penicillium chrysogenum Wisconsin 54-1255		202	199
No Yes	Penicillium marneffei ATCC 18224		220	218
No Yes	Aspergillus carbonarius ITEM 5010		277	272
No Yes	Aspergillus terreus NIH2624		256	253
No Yes	Aspergillus oryzae RIB40		292	290
No Yes	Aspergillus niger ATCC 1015		258	255
No Yes	Aspergillus flavus NRRL3357		306	301
No Yes	Aspergillus clavatus NRRL 1		167	166
No Yes	Aspergillus nidulans FGSC A4		211	209
No Yes	Tuber melanosporum Vittad	Perigord truffle	97	97
No Yes	Candida dubliniensis CD36		70	70
No Yes	Candida tropicalis MYA-3404		65	65
No Yes	Candida parapsilosis		69	66
No Yes	Candida albicans SC5314		73	73
No Yes	Yarrowia lipolytica CLIB122		81	81
No Yes	Candida lusitaniae ATCC 42720		56	56
No Yes	Vanderwaltozyma polyspora DSM 70294		46	44
No Yes	Candida glabrata CBS138		43	43
No Yes	Kluyveromyces thermotolerans CBS 6340		48	48
No Yes	Lachancea kluyveri		51	50
No Yes	Kluyveromyces waltii		53	53
No Yes	Lodderomyces elongisporus NRRL YB-4239		56	55
No Yes	Ashbya gossypii ATCC 10895		45	44
No Yes	Debaromyces hansenii		69	69
No Yes	Zygosaccharomyces rouxii		45	44
No Yes	Saccharomyces mikatae MIT		52	51
No Yes	Saccharomyces paradoxus MIT		47	47
No Yes	Saccharomyces cerevisiae SGD (SGD)	Baker's yeast	46	46
No Yes	Saccharomyces bayanus MIT		48	48
No Yes	Candida guilliermondii ATCC 6260		229	222
No Yes	Pichia stipitis CBS 6054		64	64
No Yes	Pichia pastoris GS115		44	44
No Yes	Kluyveromyces lactis		47	47
No Yes	Schizosaccharomyces octosporus yFS286		39	39
No Yes	Schizosaccharomyces japonicus yFS275		36	36
No Yes	Schizosaccharomyces pombe	Fission yeast	43	42
No Yes	Allomyces macrogynus ATCC 38327		184	182
No Yes	Rhizopus oryzae RA 99-880		107	107
No Yes	Phycomyces blakesleeanus		110	110
No Yes	Mucor circinelloides		104	103
No Yes	Encephalitozoon intestinalis		6	6
No Yes	Encephalitozoon cuniculi		5	5
No Yes	Spizellomyces punctatus DAOM BR117		109	109
No Yes	Batrachochytrium dendrobatidis JEL423		71	70
No Yes	Dictyostelium discoideum		119	116
No Yes	Dictyostelium purpureum		105	103
No Yes	Entamoeba dispar		61	60
No Yes	Entamoeba invadens		55	55
No Yes	Entamoeba histolytica 1		69	69
No Yes	Arabidopsis lyrata	Lyrate rockcress	357	352
No Yes	Arabidopsis thaliana 9 (all transcripts)	Thale cress	427	424
No Yes	Carica papaya	Papaya	241	238
No Yes	Medicago truncatula	Barrel medic	272	270
No Yes	Glycine max	Soybean	595	593
No Yes	Cucumis sativus	Cucumber	420	419
No Yes	Populus trichocarpa 1.1	Black cottonwood	490	488
No Yes	Vitis vinifera	Wine grape	388	380
No Yes	Brachypodium distachyon		493	487
No Yes	Oryza sativa ssp. japonica 5.0	Japanese rice	585	580
No Yes	Zea mays subsp. mays	Maize	631	628
No Yes	Sorghum bicolor	Sorghum	408	396
No Yes	Selaginella moellendorffii		460	452
No Yes	Physcomitrella patens subsp. patens		282	276
No Yes	Coccomyxa sp. C-169		138	134
No Yes	Chlorella sp. NC64A		158	154
No Yes	Chlorella vulgaris		142	137
No Yes	Volvox carteri f. nagariensis		141	135
No Yes	Chlamydomonas reinhardtii 4.0		139	136
No Yes	Ostreococcus sp. RCC809		83	83
No Yes	Ostreococcus lucimarinus CCE9901		81	80
No Yes	Ostreococcus tauri		85	83
No Yes	Micromonas sp. RCC299		104	103
No Yes	Micromonas pusilla CCMP1545		99	96
No Yes	Cyanidioschyzon merolae		44	44
No Yes	Giardia lamblia		23	22
No Yes	Trypanosoma cruzi strain CL Brener		102	102
No Yes	Trypanosoma brucei		48	48
No Yes	Leishmania mexicana		55	55
No Yes	Leishmania major strain Friedlin		58	58
No Yes	Leishmania infantum JPCM5		59	58
No Yes	Leishmania braziliensis MHOM/BR/75/M2904		58	56
No Yes	Aureococcus anophagefferens		193	191
No Yes	Phytophthora ramorum 1.1	Sudden oak death agent	230	222
No Yes	Phytophthora sojae 1.1		259	246
No Yes	Phytophthora infestans T30-4		201	196
No Yes	Phytophthora capsici		237	233
No Yes	Phaeodactylum tricornutum		118	117
No Yes	Fragilariopsis cylindrus		281	276
No Yes	Thalassiosira pseudonana		133	131
No Yes	Paramecium tetraurelia		238	235
No Yes	Tetrahymena thermophila SB210 1		211	205
No Yes	Babesia bovis T2Bo		13	12
No Yes	Theileria parva		23	22
No Yes	Theileria annulata		18	18
No Yes	Plasmodium falciparum 3D7		39	35
No Yes	Plasmodium vivax SaI-1		35	33
No Yes	Plasmodium knowlesi strain H		31	29
No Yes	Plasmodium yoelii ssp. yoelii 1		32	30
No Yes	Plasmodium chabaudi		60	60
No Yes	Plasmodium berghei ANKA		27	26
No Yes	Cryptosporidium hominis		21	20
No Yes	Cryptosporidium muris		33	31
No Yes	Cryptosporidium parvum Iowa II		29	28
No Yes	Neospora caninum Nc-Liverpool		56	54
No Yes	Neospora caninum		57	54
No Yes	Toxoplasma gondii ME49		54	53
No Yes	Naegleria gruberi		182	180
No Yes	Trichomonas vaginalis		115	115
No Yes	Emiliania huxleyi CCMP1516		544	536
No Yes	Candidatus Phytoplasma mali		2	2
No Yes	Acholeplasma laidlawii PG-8A		7	7
No Yes	Mesoplasma florum L1		6	6
No Yes	Ureaplasma parvum ser. 3 ATCC 700970		1	1
No Yes	Ureaplasma urealyticum ser. 10 ATCC 33699		1	1
No Yes	Mycoplasma mycoides ssp. mycoides SC PG1		9	9
No Yes	Mycoplasma capricolum ssp. capricolum ATCC 27343		9	9
No Yes	Mycoplasma crocodyli MP145		3	3
No Yes	Mycoplasma conjunctivae		2	2
No Yes	Mycoplasma penetrans HF-2		5	5
No Yes	Mycoplasma mobile 163K		3	3
No Yes	Mycoplasma arthritidis 158L3-1		1	1
No Yes	Mycoplasma agalactiae PG2		9	9
No Yes	Mycoplasma synoviae 53		2	2
No Yes	Mycoplasma pulmonis UAB CTIP		6	6
No Yes	Mycoplasma pneumoniae M129		4	4
No Yes	Mycoplasma hyopneumoniae 232		2	2
No Yes	Mycoplasma hominis		1	1
No Yes	Mycoplasma genitalium G37		4	4
No Yes	Mycoplasma gallisepticum R		3	3
No Yes	Aminobacterium colombiense DSM 12261		3	3
No Yes	Thermanaerovibrio acidaminovorans DSM 6589		3	3
No Yes	Brachyspira hyodysenteriae WA1		9	9
No Yes	Leptospira borgpetersenii ser. Hardjo-bovis L550		28	28
No Yes	Leptospira interrogans ser. Lai 56601		45	45
No Yes	Leptospira biflexa ser. Patoc Patoc 1 (Paris)		46	46
No Yes	Treponema pallidum ssp. pallidum Nichols		3	3
No Yes	Treponema denticola ATCC 35405		17	17
No Yes	Borrelia garinii PBi		1	1
No Yes	Borrelia afzelii PKo		1	1
No Yes	Borrelia burgdorferi B31		1	1
No Yes	Borrelia recurrentis A1		1	1
No Yes	Borrelia duttonii Ly		1	1
No Yes	Borrelia turicatae 91E135		1	1
No Yes	Borrelia hermsii DAH		1	1
No Yes	Rhodopirellula baltica SH 1		78	76
No Yes	Pirellula staleyi DSM 6068		65	63
No Yes	Gardnerella vaginalis 409-05		9	9
No Yes	Bifidobacterium longum NCC2705		22	20
No Yes	Bifidobacterium animalis ssp. lactis AD011		20	20
No Yes	Bifidobacterium dentium Bd1		19	19
No Yes	Bifidobacterium adolescentis ATCC 15703		17	17
No Yes	Kineococcus radiotolerans SRS30216		70	70
No Yes	Catenulispora acidiphila DSM 44928		158	158
No Yes	Stackebrandtia nassauensis DSM 44728		124	123
No Yes	Acidothermus cellulolyticus 11B		17	17
No Yes	Nakamurella multipartita DSM 44233		100	100
No Yes	Geodermatophilus obscurus DSM 43160		91	91
No Yes	Frankia sp. CcI3		57	57
No Yes	Frankia alni ACN14a		100	100
No Yes	Thermobifida fusca YX		39	39
No Yes	Thermomonospora curvata DSM 43183		77	76
No Yes	Streptosporangium roseum DSM 43021		181	180
No Yes	Streptomyces griseus ssp. griseus NBRC 13350		125	123
No Yes	Streptomyces avermitilis MA-4680		114	113
No Yes	Streptomyces scabiei 87.22		146	146
No Yes	Streptomyces coelicolor A3(2)		113	112
No Yes	Actinosynnema mirum DSM 43827		128	127
No Yes	Saccharomonospora viridis DSM 43017		60	60
No Yes	Saccharopolyspora erythraea NRRL 2338		138	138
No Yes	Kribbella flavida DSM 17836		141	141
No Yes	Nocardioides sp. JS614		59	58
No Yes	Propionibacterium acnes KPA171202		19	19
No Yes	Salinispora arenicola CNS-205		61	61
No Yes	Salinispora tropica CNB-440		67	67
No Yes	Gordonia bronchialis DSM 43247		103	102
No Yes	Rhodococcus jostii RHA1		201	199
No Yes	Rhodococcus opacus B4		193	192
No Yes	Rhodococcus erythropolis PR4		160	159
No Yes	Nocardia farcinica IFM 10152		138	138
No Yes	Mycobacterium abscessus		133	133
No Yes	Mycobacterium sp. MCS		132	132
No Yes	Mycobacterium avium ssp. paratuberculosis K-10		109	109
No Yes	Mycobacterium vanbaalenii PYR-1		159	157
No Yes	Mycobacterium tuberculosis H37Rv		98	98
No Yes	Mycobacterium bovis AF2122/97		94	94
No Yes	Mycobacterium ulcerans Agy99		95	95
No Yes	Mycobacterium gilvum PYR-GCK		148	146
No Yes	Mycobacterium marinum M		149	149
No Yes	Mycobacterium smegmatis MC2 155		157	157
No Yes	Mycobacterium leprae TN		26	26
No Yes	Corynebacterium aurimucosum		34	34
No Yes	Corynebacterium kroppenstedtii DSM 44385		28	28
No Yes	Corynebacterium efficiens YS-314		39	39
No Yes	Corynebacterium urealyticum DSM 7109		26	26
No Yes	Corynebacterium jeikeium K411		36	36
No Yes	Corynebacterium glutamicum ATCC 13032 Kitasato		42	41
No Yes	Corynebacterium diphtheriae NCTC 13129		31	30
No Yes	Tropheryma whipplei Twist		4	3
No Yes	Sanguibacter keddieii DSM 10542		51	50
No Yes	Kytococcus sedentarius DSM 20547		21	21
No Yes	Beutenbergia cavernae DSM 12333		66	66
No Yes	Leifsonia xyli ssp. xyli CTCB07		15	15
No Yes	Clavibacter michiganensis ssp. michiganensis NCPPB 382		51	51
No Yes	Jonesia denitrificans DSM 20603		21	21
No Yes	Brachybacterium faecium DSM 4810		37	37
No Yes	Xylanimonas cellulosilytica DSM 15894		36	35
No Yes	Kocuria rhizophila DC2201		38	35
No Yes	Rothia mucilaginosa DY-18		15	15
No Yes	Arthrobacter sp. FB24		55	54
No Yes	Arthrobacter chlorophenolicus A6		58	58
No Yes	Arthrobacter aurescens TC1		51	51
No Yes	Renibacterium salmoninarum ATCC 33209		65	65
No Yes	Micrococcus luteus NCTC 2665		23	23
No Yes	Cryptobacterium curtum DSM 15641		4	4
No Yes	Eggerthella lenta DSM 2243		11	11
No Yes	Slackia heliotrinireducens DSM 20476		33	33
No Yes	Atopobium parvulum DSM 20469		10	10
No Yes	Conexibacter woesei DSM 14684		96	96
No Yes	Rubrobacter xylanophilus DSM 9941		28	28
No Yes	Acidimicrobium ferrooxidans DSM 10331		16	16
No Yes	Denitrovibrio acetiphilus DSM 12809		7	7
No Yes	Deferribacter desulfuricans SSM1		7	7
No Yes	Kosmotoga olearia TBF 19.5.1		12	12
No Yes	Petrotoga mobilis SJ95		14	14
No Yes	Fervidobacterium nodosum Rt17-B1		13	13
No Yes	Thermosipho melanesiensis BI429		11	11
No Yes	Thermosipho africanus TCF52B		13	13
No Yes	Thermotoga lettingae TMO		16	16
No Yes	Thermotoga sp. RQ2		13	12
No Yes	Thermotoga naphthophila RKU-10		13	12
No Yes	Thermotoga petrophila RKU-1		12	11
No Yes	Thermotoga neapolitana DSM 4359		10	10
No Yes	Thermotoga maritima MSB8		12	11
No Yes	Dehalococcoides sp. CBDB1		7	7
No Yes	Dehalococcoides ethenogenes 195		6	6
No Yes	Thermomicrobium roseum DSM 5159		8	8
No Yes	Sphaerobacter thermophilus DSM 20745		31	31
No Yes	Herpetosiphon aurantiacus ATCC 23779		68	68
No Yes	Roseiflexus sp. RS-1		41	41
No Yes	Roseiflexus castenholzii DSM 13941		40	40
No Yes	Chloroflexus sp. Y-400-fl		54	54
No Yes	Chloroflexus aggregans DSM 9485		53	53
No Yes	Chloroflexus aurantiacus J-10-fl		55	55
No Yes	Sulfurihydrogenibium sp. YO3AOP1		3	3
No Yes	Sulfurihydrogenibium azorense Az-Fu1		3	3
No Yes	Persephonella marina EX-H1		6	6
No Yes	Hydrogenobaculum sp. Y04AAS1		4	4
No Yes	Thermocrinis albus DSM 14484		4	4
No Yes	Aquifex aeolicus VF5		4	4
No Yes	Hydrogenobacter thermophilus TK-6		3	3
No Yes	Gemmatimonas aurantiaca T-27		78	78
No Yes	Fibrobacter succinogenes ssp. succinogenes S85		21	21
No Yes	Candidatus Koribacter versatilis Ellin345		56	56
No Yes	Candidatus Solibacter usitatus Ellin6076		139	137
No Yes	Acidobacterium capsulatum ATCC 51196		39	39
No Yes	Elusimicrobium minutum Pei191		6	6
No Yes	Pelodictyon phaeoclathratiforme BU-1		17	17
No Yes	Pelodictyon luteolum DSM 273		16	16
No Yes	Chlorobium chlorochromatii CaD3		11	11
No Yes	Chlorobium phaeobacteroides DSM 266		24	24
No Yes	Chlorobium phaeovibrioides DSM 265		15	15
No Yes	Chlorobium limicola DSM 245		22	22
No Yes	Chlorobaculum parvum NCIB 8327		18	18
No Yes	Chlorobium tepidum TLS		15	15
No Yes	Chloroherpeton thalassium ATCC 35110		18	18
No Yes	Prosthecochloris aestuarii DSM 271		18	18
No Yes	Prevotella ruminicola 23		29	29
No Yes	Parabacteroides distasonis ATCC 8503		26	26
No Yes	Porphyromonas gingivalis W83		8	8
No Yes	Bacteroides vulgatus ATCC 8482		26	26
No Yes	Bacteroides thetaiotaomicron VPI-5482		26	26
No Yes	Bacteroides fragilis NCTC 9343		17	17
No Yes	Candidatus Amoebophilus asiaticus 5a2		10	10
No Yes	Salinibacter ruber DSM 13855		29	29
No Yes	Rhodothermus marinus DSM 4252		21	21
No Yes	Chitinophaga pinensis DSM 2588		114	112
No Yes	Dyadobacter fermentans DSM 18053		75	75
No Yes	Cytophaga hutchinsonii ATCC 33406		25	25
No Yes	Spirosoma linguale DSM 74		117	116
No Yes	Pedobacter heparinus DSM 2366		40	39
No Yes	Zunongwangia profunda SM-A87		54	53
No Yes	Gramella forsetii KT0803		36	36
No Yes	Robiginitalea biformata HTCC2501		45	45
No Yes	Flavobacteriaceae bacterium 3519-10		28	28
No Yes	Capnocytophaga ochracea DSM 7271		22	22
No Yes	Flavobacterium psychrophilum JIP02/86		23	23
No Yes	Flavobacterium johnsoniae UW101		59	58
No Yes	Blattabacterium sp. Bge		4	4
No Yes	Dictyoglomus turgidum DSM 6724		7	7
No Yes	Dictyoglomus thermophilum H-6-12		7	7
No Yes	Candidatus Protochlamydia amoebophila UWE25		13	13
No Yes	Chlamydophila pneumoniae TW-183		8	8
No Yes	Chlamydophila caviae GPIC		5	5
No Yes	Chlamydophila felis Fe/C-56		5	5
No Yes	Chlamydophila abortus S26/3		5	5
No Yes	Chlamydia muridarum Nigg		4	4
No Yes	Chlamydia trachomatis D/UW-3/CX		4	4
No Yes	Coraliomargarita akajimensis DSM 45221		18	18
No Yes	Opitutus terrae PB90-1		54	54
No Yes	Methylacidiphilum infernorum V4		8	8
No Yes	Akkermansia muciniphila ATCC BAA-835		12	12
No Yes	Thermodesulfovibrio yellowstonii DSM 11347		1	1
No Yes	Streptobacillus moniliformis DSM 12112		12	12
No Yes	Sebaldella termitidis ATCC 33386		21	21
No Yes	Leptotrichia buccalis DSM 1135		18	18
No Yes	Fusobacterium nucleatum ssp. nucleatum ATCC 25586		10	10
No Yes	Thermobaculum terrenum ATCC BAA-798		19	19
No Yes	Deinococcus deserti VCD115		34	34
No Yes	Deinococcus geothermalis DSM 11300		22	22
No Yes	Deinococcus radiodurans R1		39	39
No Yes	Meiothermus ruber DSM 1279		27	27
No Yes	Thermus thermophilus HB27 (First sequenced)		15	15
No Yes	Natranaerobius thermophilus JW/NM-WN-LF		7	7
No Yes	Symbiobacterium thermophilum IAM 14863		30	29
No Yes	Anaerococcus prevotii DSM 20548		10	10
No Yes	Finegoldia magna ATCC 29328		4	4
No Yes	Clostridiales genomosp. BVAB3 UPII9-5		4	4
No Yes	Anaerocellum thermophilum DSM 6725		6	6
No Yes	Candidatus Desulforudis audaxviator MP104C		1	1
No Yes	Pelotomaculum thermopropionicum SI		4	4
No Yes	Desulfitobacterium hafniense Y51		24	24
No Yes	Desulfotomaculum reducens MI-1		3	3
No Yes	Desulfotomaculum acetoxidans DSM 771		5	5
No Yes	Eubacterium rectale ATCC 33656		9	9
No Yes	Eubacterium eligens ATCC 27750		7	6
No Yes	Syntrophomonas wolfei ssp. wolfei Goettingen		12	12
No Yes	Heliobacterium modesticaldum Ice1		4	4
No Yes	Alkaliphilus oremlandii OhILAs		7	7
No Yes	Alkaliphilus metalliredigens QYMF		6	6
No Yes	Clostridium phytofermentans ISDg		21	21
No Yes	Clostridium novyi NT		3	3
No Yes	Clostridium kluyveri DSM 555		13	13
No Yes	Clostridium cellulolyticum H10		17	17
No Yes	Clostridium beijerinckii NCIMB 8052		29	29
No Yes	Clostridium thermocellum ATCC 27405		13	13
No Yes	Clostridium tetani E88		6	6
No Yes	Clostridium perfringens 13		12	12
No Yes	Clostridium difficile 630		19	19
No Yes	Clostridium botulinum A ATCC 3502		13	13
No Yes	Clostridium acetobutylicum ATCC 824		22	22
No Yes	Veillonella parvula DSM 2008		2	2
No Yes	Acidaminococcus fermentans DSM 20731		12	12
No Yes	Caldicellulosiruptor saccharolyticus DSM 8903		7	7
No Yes	Coprothermobacter proteolyticus DSM 5265		5	5
No Yes	Carboxydothermus hydrogenoformans Z-2901		3	3
No Yes	Moorella thermoacetica ATCC 39073		1	1
No Yes	Thermoanaerobacter pseudethanolicus ATCC 33223		7	7
No Yes	Thermoanaerobacter sp. X514		7	7
No Yes	Thermoanaerobacter tengcongensis MB4		10	10
No Yes	Thermoanaerobacter italicus Ab9		8	8
No Yes	Halothermothrix orenii H 168		8	8
No Yes	Enterococcus faecalis V583		17	17
No Yes	Oenococcus oeni PSU-1		19	19
No Yes	Leuconostoc citreum KM20		19	19
No Yes	Leuconostoc mesenteroides ssp. mesenteroides ATCC 8293		13	13
No Yes	Lactobacillus casei ATCC 334		20	20
No Yes	Lactobacillus crispatus ST1		23	23
No Yes	Lactobacillus rhamnosus GG		25	25
No Yes	Lactobacillus johnsonii NCC 533		19	19
No Yes	Lactobacillus salivarius UCC118		9	9
No Yes	Lactobacillus fermentum IFO 3956		15	15
No Yes	Lactobacillus sakei ssp. sakei 23K		13	13
No Yes	Lactobacillus reuteri DSM 20016		15	15
No Yes	Lactobacillus gasseri ATCC 33323		19	19
No Yes	Lactobacillus plantarum WCFS1		33	33
No Yes	Lactobacillus helveticus DPC 4571		13	13
No Yes	Lactobacillus delbrueckii ssp. bulgaricus ATCC 11842		13	13
No Yes	Lactobacillus brevis ATCC 367		18	18
No Yes	Lactobacillus acidophilus NCFM		22	22
No Yes	Pediococcus pentosaceus ATCC 25745		13	13
No Yes	Lactococcus lactis ssp. lactis Il1403		14	14
No Yes	Streptococcus gallolyticus UCN34		20	20
No Yes	Streptococcus equi ssp. zooepidemicus MGCS10565		11	11
No Yes	Streptococcus dysgalactiae ssp. equisimilis GGS_124		5	5
No Yes	Streptococcus mitis B6		12	12
No Yes	Streptococcus uberis 0140J		9	9
No Yes	Streptococcus pyogenes M1 GAS		5	5
No Yes	Streptococcus pneumoniae TIGR4 (Virulent)		12	12
No Yes	Streptococcus agalactiae NEM316		15	15
No Yes	Streptococcus mutans UA159		19	19
No Yes	Streptococcus thermophilus LMG 18311 (Older strain)		7	7
No Yes	Streptococcus suis 05ZYH33		9	9
No Yes	Streptococcus sanguinis SK36		18	18
No Yes	Streptococcus gordonii Challis subCH1		15	15
No Yes	Exiguobacterium sp. AT1b		26	26
No Yes	Exiguobacterium sibiricum 255-15		26	25
No Yes	Bacillus tusciae DSM 2912		16	16
No Yes	Alicyclobacillus acidocaldarius ssp. acidocaldarius DSM 446		20	20
No Yes	Brevibacillus brevis NBRC 100599		51	51
No Yes	Paenibacillus sp. JDR-2		43	43
No Yes	Listeria welshimeri ser. 6b SLCC5334		26	26
No Yes	Listeria innocua Clip11262		24	24
No Yes	Listeria seeligeri ser. 1/2b SLCC3954		24	24
No Yes	Listeria monocytogenes EGD-e		27	27
No Yes	Lysinibacillus sphaericus C3-41		37	37
No Yes	Oceanobacillus iheyensis HTE831		28	28
No Yes	Anoxybacillus flavithermus WK1		12	12
No Yes	Geobacillus sp. WCH70		10	10
No Yes	Geobacillus thermodenitrificans NG80-2		14	14
No Yes	Geobacillus kaustophilus HTA426		15	15
No Yes	Bacillus subtilis ssp. subtilis 168		39	39
No Yes	Bacillus licheniformis ATCC 14580		35	34
No Yes	Bacillus amyloliquefaciens FZB42		32	32
No Yes	Bacillus halodurans C-125		24	24
No Yes	Bacillus weihenstephanensis KBAB4		51	51
No Yes	Bacillus thuringiensis ser. konkukian 97-27		49	49
No Yes	Bacillus cereus ATCC 14579		51	51
No Yes	Bacillus anthracis Ames Ancestor		53	53
No Yes	Bacillus pseudofirmus OF4		29	29
No Yes	Bacillus clausii KSM-K16		31	31
No Yes	Bacillus pumilus SAFR-032		39	39
No Yes	Bacillus megaterium QM B1551		47	47
No Yes	Macrococcus caseolyticus JCSC5402		15	15
No Yes	Staphylococcus saprophyticus ssp. saprophyticus ATCC 15305		25	25
No Yes	Staphylococcus lugdunensis HKU09-01		29	29
No Yes	Staphylococcus haemolyticus JCSC1435		21	21
No Yes	Staphylococcus epidermidis RP62A		24	24
No Yes	Staphylococcus carnosus ssp. carnosus TM300		28	28
No Yes	Staphylococcus aureus ssp. aureus NCTC 8325		26	26
No Yes	Nautilia profundicola AmH		6	6
No Yes	Sulfurospirillum deleyianum DSM 6946		9	9
No Yes	Arcobacter butzleri RM4018		10	10
No Yes	Campylobacter hominis ATCC BAA-381		6	6
No Yes	Campylobacter lari RM2100		5	5
No Yes	Campylobacter curvus 525.92		11	11
No Yes	Campylobacter concisus 13826		6	6
No Yes	Campylobacter jejuni ssp. jejuni NCTC 11168		7	7
No Yes	Campylobacter fetus ssp. fetus 82-40		3	3
No Yes	Sulfurimonas denitrificans DSM 1251		5	5
No Yes	Wolinella succinogenes DSM 1740		5	5
No Yes	Helicobacter hepaticus ATCC 51449		6	6
No Yes	Helicobacter mustelae 12198		4	4
No Yes	Helicobacter acinonychis Sheeba		2	2
No Yes	Helicobacter pylori 26695		2	2
No Yes	Nitratiruptor sp. SB155-2		6	6
No Yes	Sulfurovum sp. NBC37-1		8	8
No Yes	Bdellovibrio bacteriovorus HD100		41	41
No Yes	Syntrophus aciditrophicus SB		9	9
No Yes	Syntrophobacter fumaroxidans MPOB		16	16
No Yes	Desulfotalea psychrophila LSv54		13	13
No Yes	Desulfatibacillum alkenivorans AK-01		44	43
No Yes	Desulfobacterium autotrophicum HRM2		22	22
No Yes	Desulfococcus oleovorans Hxd3		26	26
No Yes	Desulfohalobium retbaense DSM 5692		8	8
No Yes	Desulfomicrobium baculatum DSM 4028		8	8
No Yes	Lawsonia intracellularis PHE/MN1-00		3	3
No Yes	Desulfovibrio magneticus RS-1		16	16
No Yes	Desulfovibrio vulgaris Hildenborough		7	7
No Yes	Desulfovibrio salexigens DSM 2638		13	13
No Yes	Desulfovibrio desulfuricans ssp. desulfuricans G20		9	9
No Yes	Pelobacter propionicus DSM 2379		14	13
No Yes	Pelobacter carbinolicus DSM 2380		11	11
No Yes	Geobacter uraniireducens Rf4		22	21
No Yes	Geobacter sp. FRC-32		24	23
No Yes	Geobacter lovleyi SZ		9	9
No Yes	Geobacter bemidjiensis Bem		20	20
No Yes	Geobacter sulfurreducens PCA		12	12
No Yes	Geobacter metallireducens GS-15		16	15
No Yes	Haliangium ochraceum DSM 14365		80	78
No Yes	Sorangium cellulosum So ce 56		114	114
No Yes	Anaeromyxobacter sp. Fw109-5		44	43
No Yes	Anaeromyxobacter dehalogenans 2CP-C		39	38
No Yes	Myxococcus xanthus DK 1622		120	120
No Yes	Magnetococcus sp. MC-1		13	13
No Yes	Sideroxydans lithotrophicus ES-1		15	15
No Yes	Aromatoleum aromaticum EbN1		30	28
No Yes	Dechloromonas aromatica RCB		45	43
No Yes	Thauera sp. MZ1T		30	28
No Yes	Laribacter hongkongensis HLHK9		18	18
No Yes	Chromobacterium violaceum ATCC 12472		48	47
No Yes	Neisseria meningitidis Z2491		9	9
No Yes	Neisseria gonorrhoeae FA 1090		9	9
No Yes	Methylotenera mobilis JLW8		7	7
No Yes	Methylovorus sp. SIP3-4		15	15
No Yes	Methylobacillus flagellatus KT		15	15
No Yes	Thiobacillus denitrificans ATCC 25259		11	11
No Yes	Candidatus Accumulibacter phosphatis clade IIA UW-1		48	47
No Yes	Methylibium petroleiphilum PM1		41	40
No Yes	Leptothrix cholodnii SP-6		41	41
No Yes	Ralstonia eutropha JMP134		82	81
No Yes	Cupriavidus taiwanensis		86	85
No Yes	Ralstonia metallidurans CH34		75	74
No Yes	Ralstonia pickettii 12J		59	58
No Yes	Ralstonia solanacearum GMI1000		42	42
No Yes	Polynucleobacter necessarius ssp. asymbioticus QLW-P1DMWA-1		22	22
No Yes	Burkholderia phytofirmans PsJN		97	94
No Yes	Burkholderia phymatum STM815		64	63
No Yes	Burkholderia thailandensis E264		83	81
No Yes	Burkholderia pseudomallei K96243		95	92
No Yes	Burkholderia mallei ATCC 23344		54	52
No Yes	Burkholderia sp. 383		145	143
No Yes	Burkholderia ambifaria AMMD		95	93
No Yes	Burkholderia cenocepacia AU 1054		99	98
No Yes	Burkholderia multivorans ATCC 17616		71	69
No Yes	Burkholderia vietnamiensis G4		87	85
No Yes	Burkholderia xenovorans LB400		111	108
No Yes	Burkholderia glumae BGR1		82	81
No Yes	Verminephrobacter eiseniae EF01-2		35	35
No Yes	Delftia acidovorans SPH-1		60	60
No Yes	Polaromonas sp. JS666		56	56
No Yes	Polaromonas naphthalenivorans CJ2		43	43
No Yes	Variovorax paradoxus S110		108	108
No Yes	Rhodoferax ferrireducens T118		48	46
No Yes	Diaphorobacter sp. TPSY		31	31
No Yes	Acidovorax sp. JS42		29	29
No Yes	Acidovorax citrulli AAC00-1		47	47
No Yes	Comamonas sp. CNB-1		52	52
No Yes	Herminiimonas arsenicoxydans		26	26
No Yes	Janthinobacterium sp. Marseille		34	34
No Yes	Bordetella petrii DSM 12804		40	40
No Yes	Bordetella avium 197N		31	31
No Yes	Bordetella pertussis Tohama I		34	34
No Yes	Bordetella parapertussis 12822		45	45
No Yes	Bordetella bronchiseptica RB50		51	51
No Yes	Nitrosospira multiformis ATCC 25196		21	21
No Yes	Nitrosomonas eutropha C91		16	16
No Yes	Nitrosomonas europaea ATCC 19718		17	16
No Yes	Caulobacter sp. K31		92	92
No Yes	Caulobacter crescentus CB15		66	66
No Yes	Caulobacter segnis ATCC 21756		100	100
No Yes	Phenylobacterium zucineum HLK1		56	56
No Yes	Erythrobacter litoralis HTCC2594		45	45
No Yes	Sphingopyxis alaskensis RB2256		47	47
No Yes	Novosphingobium aromaticivorans DSM 12444		41	41
No Yes	Sphingobium japonicum UT26S		49	48
No Yes	Sphingomonas wittichii RW1		100	99
No Yes	Zymomonas mobilis ssp. mobilis ZM4		18	18
No Yes	Maricaulis maris MCS10		51	51
No Yes	Hirschia baltica ATCC 49814		49	48
No Yes	Hyphomonas neptunium ATCC 15444		57	57
No Yes	Dinoroseobacter shibae DFL 12		32	32
No Yes	Jannaschia sp. CCS1		47	47
No Yes	Ruegeria sp. TM1040		30	30
No Yes	Ruegeria pomeroyi DSS-3		35	35
No Yes	Roseobacter denitrificans OCh 114		34	34
No Yes	Rhodobacter sphaeroides 2.4.1		27	27
No Yes	Rhodobacter capsulatus SB1003		29	29
No Yes	Paracoccus denitrificans PD1222		41	40
No Yes	Magnetospirillum magneticum AMB-1		28	28
No Yes	Rhodospirillum centenum SW		48	47
No Yes	Rhodospirillum rubrum ATCC 11170		34	33
No Yes	Azospirillum sp. B510		25	25
No Yes	Granulibacter bethesdensis CGDNIH1		25	25
No Yes	Gluconacetobacter diazotrophicus PAl 5		30	30
No Yes	Gluconobacter oxydans 621H		29	29
No Yes	Acetobacter pasteurianus IFO 3283-01		21	21
No Yes	alpha proteobacterium IMCC1322		19	19
No Yes	Candidatus Pelagibacter ubique HTCC1062		9	9
No Yes	Neorickettsia sennetsu Miyayama		4	4
No Yes	Neorickettsia risticii Illinois		4	4
No Yes	Ehrlichia chaffeensis Arkansas		5	5
No Yes	Ehrlichia canis Jake		4	4
No Yes	Ehrlichia ruminantium Welgevonden		3	3
No Yes	Anaplasma phagocytophilum HZ		5	5
No Yes	Anaplasma marginale St. Maries		4	4
No Yes	Anaplasma centrale Israel		4	4
No Yes	Orientia tsutsugamushi Boryong		7	7
No Yes	Rickettsia bellii RML369-C		14	14
No Yes	Rickettsia canadensis McKiel		8	8
No Yes	Rickettsia typhi Wilmington		11	11
No Yes	Rickettsia prowazekii Madrid E		11	11
No Yes	Rickettsia peacockii Rustic		8	8
No Yes	Rickettsia felis URRWXCal2		15	15
No Yes	Rickettsia massiliae MTU5		10	10
No Yes	Rickettsia africae ESF-5		9	8
No Yes	Rickettsia akari Hartford		11	11
No Yes	Rickettsia rickettsii Sheila Smith		10	10
No Yes	Rickettsia conorii Malish 7		11	11
No Yes	Wolbachia endosymbiont of Culex_quinquefasciatus Pel		7	7
No Yes	Wolbachia endosymbiont of Drosophila melanogaster (Genus only)		3	3
No Yes	Wolbachia endosymbiont TRS of Brugia malayi		2	2
No Yes	Wolbachia sp. wRi		4	4
No Yes	Xanthobacter autotrophicus Py2		56	55
No Yes	Azorhizobium caulinodans ORS 571		68	67
No Yes	Methylobacterium chloromethanicum CM4		56	56
No Yes	Methylobacterium extorquens PA1		59	58
No Yes	Methylobacterium sp. 4-46		80	77
No Yes	Methylobacterium populi BJ001		50	50
No Yes	Methylobacterium nodulans ORS 2060		64	63
No Yes	Methylobacterium radiotolerans JCM 2831		69	67
No Yes	Candidatus Hodgkinia cicadicola Dsem		1	1
No Yes	Ochrobactrum anthropi ATCC 49188		43	41
No Yes	Brucella microti CCM 4915		20	20
No Yes	Brucella canis ATCC 23365		22	22
No Yes	Brucella suis 1330		20	20
No Yes	Brucella melitensis bv. 1 16M		23	22
No Yes	Brucella ovis ATCC 25840		18	17
No Yes	Brucella abortus bv. 1 9-941		21	20
No Yes	Sinorhizobium medicae WSM419		27	27
No Yes	Sinorhizobium meliloti 1021		29	29
No Yes	Rhizobium etli CFN 42		42	40
No Yes	Rhizobium sp. NGR234		31	30
No Yes	Rhizobium leguminosarum bv. viciae 3841		59	57
No Yes	Agrobacterium vitis S4		48	46
No Yes	Agrobacterium radiobacter K84		82	81
No Yes	Agrobacterium tumefaciens C58		47	45
No Yes	Candidatus Liberibacter asiaticus psy62		3	3
No Yes	Chelativorans sp. BNC1		33	32
No Yes	Parvibaculum lavamentivorans DS-1		69	69
No Yes	Mesorhizobium loti MAFF303099		81	81
No Yes	Methylocella silvestris BL2		74	74
No Yes	Beijerinckia indica ssp. indica ATCC 9039		55	55
No Yes	Oligotropha carboxidovorans OM5		27	27
No Yes	Rhodopseudomonas palustris CGA009		52	52
No Yes	Nitrobacter winogradskyi Nb-255		14	14
No Yes	Nitrobacter hamburgensis X14		19	19
No Yes	Bradyrhizobium sp. ORS278		95	94
No Yes	Bradyrhizobium japonicum USDA 110		125	125
No Yes	Bartonella tribocorum CIP 105476		8	8
No Yes	Bartonella henselae Houston-1		8	8
No Yes	Bartonella grahamii as4aup		8	8
No Yes	Bartonella quintana Toulouse		7	7
No Yes	Bartonella bacilliformis KC583		6	6
No Yes	Acidithiobacillus ferrooxidans ATCC 23270		12	12
No Yes	Mannheimia succiniciproducens MBEL55E		19	19
No Yes	Aggregatibacter aphrophilus NJ8700		11	11
No Yes	Aggregatibacter actinomycetemcomitans D11S-1		13	13
No Yes	Haemophilus somnus 129PT		6	6
No Yes	Pasteurella multocida ssp. multocida Pm70		9	9
No Yes	Haemophilus parasuis SH0165		10	10
No Yes	Haemophilus ducreyi 35000HP		3	3
No Yes	Haemophilus influenzae Rd KW20		5	5
No Yes	Actinobacillus succinogenes 130Z		27	27
No Yes	Actinobacillus pleuropneumoniae L20		9	9
No Yes	Tolumonas auensis DSM 9187		21	21
No Yes	Aeromonas salmonicida ssp. salmonicida A449		31	31
No Yes	Aeromonas hydrophila ssp. hydrophila ATCC 7966		36	36
No Yes	Aliivibrio salmonicida LFI1238		18	18
No Yes	Vibrio fischeri ES114		21	21
No Yes	Vibrio parahaemolyticus RIMD 2210633		29	29
No Yes	Vibrio harveyi ATCC BAA-1116		36	36
No Yes	Vibrio sp. Ex25		31	31
No Yes	Vibrio splendidus LGP32		31	31
No Yes	Vibrio vulnificus YJ016 (Good annotation)		27	27
No Yes	Vibrio cholerae O1 biov. El Tor N16961		21	21
No Yes	Photobacterium profundum SS9		41	41
No Yes	Psychromonas ingrahamii 37		22	21
No Yes	Idiomarina loihiensis L2TR		35	34
No Yes	Shewanella piezotolerans WP3		52	52
No Yes	Shewanella loihica PV-4		46	46
No Yes	Shewanella halifaxensis HAW-EB4		47	47
No Yes	Shewanella sediminis HAW-EB3		52	52
No Yes	Shewanella denitrificans OS217		50	49
No Yes	Shewanella pealeana ATCC 700345		48	48
No Yes	Shewanella oneidensis MR-1		42	41
No Yes	Shewanella baltica OS155		39	39
No Yes	Shewanella woodyi ATCC 51908		61	61
No Yes	Shewanella sp. MR-7		43	43
No Yes	Shewanella amazonensis SB2B		47	47
No Yes	Shewanella violacea DSS12		41	41
No Yes	Shewanella frigidimarina NCIMB 400		56	53
No Yes	Shewanella putrefaciens CN-32		34	34
No Yes	Colwellia psychrerythraea 34H		47	47
No Yes	Pseudoalteromonas atlantica T6c		55	54
No Yes	Pseudoalteromonas haloplanktis TAC125		37	36
No Yes	Teredinibacter turnerae T7901		58	58
No Yes	Saccharophagus degradans 2-40		45	43
No Yes	Marinobacter aquaeolei VT8		34	33
No Yes	Alteromonas macleodii Deep ecotype		39	38
No Yes	Hahella chejuensis KCTC 2396		78	78
No Yes	Alcanivorax borkumensis SK2		47	46
No Yes	Marinomonas sp. MWYL1		39	39
No Yes	Chromohalobacter salexigens DSM 3043		30	30
No Yes	Methylococcus capsulatus Bath		10	10
No Yes	Dichelobacter nodosus VCS1703A		5	5
No Yes	Stenotrophomonas maltophilia R551-3		68	67
No Yes	Xylella fastidiosa 9a5c		28	27
No Yes	Xanthomonas axonopodis pv. citri 306		75	73
No Yes	Xanthomonas albilineans		64	62
No Yes	Xanthomonas oryzae pv. oryzae KACC10331		57	53
No Yes	Xanthomonas campestris pv. campestris ATCC 33913 (Completed 2001)		77	75
No Yes	Halothiobacillus neapolitanus c2		10	10
No Yes	Alkalilimnicola ehrlichii MLHE-1		31	28
No Yes	Thioalkalivibrio sp. HL-EbGR7		24	24
No Yes	Halorhodospira halophila SL1		23	23
No Yes	Allochromatium vinosum DSM 180		21	21
No Yes	Nitrosococcus halophilus Nc4		26	26
No Yes	Nitrosococcus oceani ATCC 19707		22	22
No Yes	Coxiella burnetii RSA 493		7	7
No Yes	Legionella longbeachae NSW150		43	43
No Yes	Legionella pneumophila ssp. pneumophila Philadelphia 1		45	45
No Yes	Kangiella koreensis DSM 16069		33	33
No Yes	Baumannia cicadellinicola Hc		1	1
No Yes	Candidatus Vesicomyosocius okutanii HA		1	1
No Yes	Candidatus Ruthia magnifica Cm		2	2
No Yes	Cronobacter turicensis z3032		27	27
No Yes	Cronobacter sakazakii ATCC BAA-894		27	27
No Yes	Candidatus Riesia pediculicola USDA		1	1
No Yes	Dickeya zeae Ech1591		37	37
No Yes	Dickeya dadantii Ech703		36	36
No Yes	Candidatus Hamiltonella defensa 5AT		2	2
No Yes	Pectobacterium wasabiae WPP163		32	32
No Yes	Pectobacterium atrosepticum SCRI1043		34	33
No Yes	Pectobacterium carotovorum ssp. carotovorum PC1		35	35
No Yes	Sodalis glossinidius morsitans		10	10
No Yes	Pantoea ananatis LMG 20103		33	33
No Yes	Wigglesworthia glossinidia		1	1
No Yes	Photorhabdus asymbiotica		55	55
No Yes	Photorhabdus luminescens ssp. laumondii TTO1		49	49
No Yes	Edwardsiella ictaluri 93-146		17	17
No Yes	Edwardsiella tarda EIB202		19	18
No Yes	Yersinia pseudotuberculosis IP 32953		25	25
No Yes	Yersinia pestis CO92		24	24
No Yes	Yersinia enterocolitica ssp. enterocolitica 8081		27	27
No Yes	Xenorhabdus bovienii SS-2004		34	31
No Yes	Shigella sonnei Ss046		23	23
No Yes	Shigella flexneri 2a 2457T		19	19
No Yes	Shigella dysenteriae Sd197		20	20
No Yes	Shigella boydii Sb227		20	20
No Yes	Serratia proteamaculans 568		48	48
No Yes	Salmonella enterica ssp. enterica ser. Typhimurium LT2		25	25
No Yes	Proteus mirabilis HI4320		25	25
No Yes	Klebsiella variicola At-22		34	34
No Yes	Klebsiella pneumoniae ssp. pneumoniae MGH 78578		30	30
No Yes	Escherichia fergusonii ATCC 35469		22	22
No Yes	Escherichia coli K-12 subMG1655		23	23
No Yes	Erwinia tasmaniensis Et1/99		16	16
No Yes	Erwinia pyrifoliae Ep1/96		17	17
No Yes	Erwinia amylovora ATCC 49946		18	18
No Yes	Enterobacter sp. 638		31	31
No Yes	Citrobacter rodentium ICC168		23	23
No Yes	Citrobacter koseri ATCC BAA-895		28	28
No Yes	Azotobacter vinelandii DJ		59	58
No Yes	Pseudomonas entomophila L48		70	69
No Yes	Pseudomonas syringae pv. tomato DC3000		72	70
No Yes	Pseudomonas stutzeri A1501		41	41
No Yes	Pseudomonas putida KT2440		56	56
No Yes	Pseudomonas fluorescens Pf-5		85	83
No Yes	Pseudomonas mendocina ymp		61	61
No Yes	Pseudomonas aeruginosa PAO1		82	81
No Yes	Cellvibrio japonicus Ueda107		38	38
No Yes	Psychrobacter sp. PRwf-1		29	29
No Yes	Psychrobacter arcticus 273-4		14	14
No Yes	Psychrobacter cryohalolentis K5		28	28
No Yes	Acinetobacter sp. ADP1		54	54
No Yes	Acinetobacter baumannii ATCC 17978		53	53
No Yes	Thiomicrospira crunogena XCL-2		8	8
No Yes	Francisella philomiragia ssp. philomiragia ATCC 25017		10	10
No Yes	Francisella tularensis ssp. tularensis SCHU S4		7	7
No Yes	Gloeobacter violaceus PCC 7421		57	57
No Yes	Acaryochloris marina MBIC11017		55	55
No Yes	Prochlorococcus marinus MIT 9313		17	17
No Yes	Nostoc punctiforme PCC 73102		75	75
No Yes	Nostoc sp. PCC 7120		48	48
No Yes	Anabaena variabilis ATCC 29413		59	59
No Yes	Trichodesmium erythraeum IMS101		47	47
No Yes	Thermosynechococcus elongatus BP-1		19	19
No Yes	cyanobacterium UCYN-A		2	2
No Yes	Cyanothece sp. ATCC 51142		51	51
No Yes	Synechocystis sp. PCC 6803		27	27
No Yes	Synechococcus elongatus PCC 6301		28	28
No Yes	Microcystis aeruginosa NIES-843		32	32
No Yes	Nitrosopumilus maritimus SCM1		3	3
No Yes	Candidatus Korarchaeum cryptofilum OPF8		1	1
No Yes	Methanocella paludicola SANAE		11	11
No Yes	Methanosaeta thermophila PT		3	3
No Yes	Methanococcoides burtonii DSM 6242		4	4
No Yes	Methanosarcina acetivorans C2A		20	20
No Yes	Methanosarcina mazei Go1		10	10
No Yes	Methanosarcina barkeri Fusaro		10	10
No Yes	Methanohalophilus mahii DSM 5219		3	3
No Yes	Methanosphaerula palustris E1-9c		16	16
No Yes	Candidatus Methanoregula boonei 6A8		9	9
No Yes	Methanospirillum hungatei JF-1		11	11
No Yes	Methanocorpusculum labreanum Z		6	6
No Yes	Methanoculleus marisnigri JR1		7	7
No Yes	Ferroglobus placidus DSM 10642		8	8
No Yes	Archaeoglobus profundus DSM 5631		1	1
No Yes	Archaeoglobus fulgidus DSM 4304		14	14
No Yes	Thermococcus onnurineus NA1		5	5
No Yes	Thermococcus kodakarensis KOD1		6	6
No Yes	Thermococcus gammatolerans EJ3		6	6
No Yes	Thermococcus sibiricus MM 739		4	4
No Yes	Pyrococcus horikoshii OT3		3	3
No Yes	Pyrococcus abyssi GE5		5	5
No Yes	Pyrococcus furiosus DSM 3638		5	5
No Yes	Thermoplasma volcanium GSS1		10	10
No Yes	Thermoplasma acidophilum DSM 1728		8	8
No Yes	Picrophilus torridus DSM 9790		9	9
No Yes	Haloquadratum walsbyi DSM 16790		8	8
No Yes	Halomicrobium mukohataei DSM 12286		20	20
No Yes	Halorhabdus utahensis DSM 12940		15	15
No Yes	Haloterrigena turkmenica DSM 5511		27	27
No Yes	Natronomonas pharaonis DSM 2160		10	10
No Yes	Natrialba magadii ATCC 43099		21	21
No Yes	Halorubrum lacusprofundi ATCC 49239		15	15
No Yes	Haloferax volcanii DS2		14	14
No Yes	Halobacterium salinarum R1		8	8
No Yes	Halobacterium sp. NRC-1		8	8
No Yes	Haloarcula marismortui ATCC 43049		18	18
No Yes	Methanococcus maripaludis S2		2	2
No Yes	Methanococcus vannielii SB		2	2
No Yes	Methanothermobacter thermautotrophicus Delta H		2	2
No Yes	Methanosphaera stadtmanae DSM 3091		3	3
No Yes	Methanobrevibacter ruminantium M1		7	7
No Yes	Methanobrevibacter smithii ATCC 35061		3	3
No Yes	uncultured methanogenic archaeon RC-I		15	15
No Yes	Aciduliprofundum boonei T469		7	7
No Yes	Hyperthermus butylicus DSM 5456		1	1
No Yes	Aeropyrum pernix K1		6	6
No Yes	Ignicoccus hospitalis KIN4/I		1	1
No Yes	Staphylothermus marinus F1		3	3
No Yes	Desulfurococcus kamchatkensis 1221n		2	2
No Yes	Metallosphaera sedula DSM 5348		9	9
No Yes	Sulfolobus tokodaii 7		10	10
No Yes	Sulfolobus islandicus Y.N.15.51		11	11
No Yes	Sulfolobus solfataricus P2		13	13
No Yes	Sulfolobus acidocaldarius DSM 639		12	12
No Yes	Thermofilum pendens Hrk 5		2	2
No Yes	Caldivirga maquilingensis IC-167		8	8
No Yes	Pyrobaculum calidifontis JCM 11548		4	4
No Yes	Pyrobaculum arsenaticum DSM 13514		4	4
No Yes	Pyrobaculum aerophilum IM2		4	4
No Yes	Pyrobaculum islandicum DSM 4184		3	3
No Yes	Thermoproteus neutrophilus V24Sta		3	3
No Yes	Drosophila melanogaster FlyBase 5.12 (all transcripts) (FlyBase)	Fruit fly	222	220
No Yes	Caenorhabditis elegans WormBase WS194 (all transcripts) (WormBase)	Nematode	234	225
No Yes	Cryptococcus neoformans var. grubii H99		72	72
No Yes	Cryptococcus neoformans B-3501A		73	73
No Yes	Ajellomyces dermatitidis ER-3		99	99
No Yes	Histoplasma capsulatum H143		94	93
No Yes	Histoplasma capsulatum H88		95	94
No Yes	Histoplasma capsulatum G186AR		100	98
No Yes	Paracoccidioides brasiliensis Pb01		94	88
No Yes	Paracoccidioides brasiliensis Pb03		93	90
No Yes	Coccidioides posadasii str. Silveira		110	109
No Yes	Coccidioides immitis RMSCC 3703		99	97
No Yes	Coccidioides immitis RMSCC 2394		108	106
No Yes	Coccidioides immitis H538.4		107	103
No Yes	Aspergillus fumigatus A1163		180	177
No Yes	Candida albicans WO-1		71	70
No Yes	Saccharomyces cerevisiae YJM789		46	46
No Yes	Saccharomyces cerevisiae RM11-1a		45	45
No Yes	Saccharomyces cerevisiae Ensembl 49_1h (all transcripts)	Baker's yeast	46	46
No Yes	Schizosaccharomyces pombe 972h-		43	42
No Yes	Batrachochytrium dendrobatidis JAM81		76	76
No Yes	Oryza sativa ssp. Indica (Subspecies)	Indian rice	452	445
No Yes	Plasmodium falciparum HB3		40	37
No Yes	Plasmodium falciparum Dd2		20	19
No Yes	Ureaplasma parvum ser. 3 ATCC 27815		1	1
No Yes	Mycoplasma agalactiae		8	8
No Yes	Mycoplasma hyopneumoniae 7448		2	2
No Yes	Mycoplasma hyopneumoniae J		2	2
No Yes	Leptospira borgpetersenii ser. Hardjo-bovis JB197		26	26
No Yes	Leptospira interrogans ser. Copenhageni Fiocruz L1-130		42	42
No Yes	Leptospira biflexa ser. Patoc Patoc 1 (Ames)		46	46
No Yes	Treponema pallidum ssp. pallidum SS14		3	3
No Yes	Borrelia burgdorferi ZS7		1	1
No Yes	Bifidobacterium longum ssp. infantis ATCC 15697		21	21
No Yes	Bifidobacterium longum		22	22
No Yes	Bifidobacterium animalis ssp. lactis Bl-04		20	20
No Yes	Bifidobacterium animalis ssp. lactis DSM 10140		20	20
No Yes	Frankia sp. EAN1pec		110	110
No Yes	Propionibacterium acnes SK137		22	22
No Yes	Mycobacterium sp. KMS		134	134
No Yes	Mycobacterium sp. JLS		141	141
No Yes	Mycobacterium avium 104		117	117
No Yes	Mycobacterium tuberculosis KZN 1435		98	98
No Yes	Mycobacterium tuberculosis H37Ra		97	97
No Yes	Mycobacterium tuberculosis F11		96	96
No Yes	Mycobacterium tuberculosis CDC1551		93	93
No Yes	Mycobacterium bovis BCG Tokyo 172		96	96
No Yes	Mycobacterium bovis BCG Pasteur 1173P2		93	93
No Yes	Mycobacterium leprae Br4923		26	26
No Yes	Corynebacterium glutamicum R		43	41
No Yes	Corynebacterium glutamicum ATCC 13032 Bielefeld		42	41
No Yes	Tropheryma whipplei TW08/27		3	2
No Yes	Clavibacter michiganensis ssp. sepedonicus		40	40
No Yes	Dehalococcoides sp. GT		6	6
No Yes	Dehalococcoides sp. VS		4	4
No Yes	Dehalococcoides sp. BAV1		7	7
No Yes	Chlorobium phaeobacteroides BS1		22	22
No Yes	Porphyromonas gingivalis ATCC 33277		8	8
No Yes	Bacteroides fragilis YCH46		17	17
No Yes	Salinibacter ruber		28	28
No Yes	Blattabacterium sp. BPLAN		4	4
No Yes	Chlamydophila pneumoniae J138		8	8
No Yes	Chlamydophila pneumoniae CWL029		7	7
No Yes	Chlamydophila pneumoniae AR39		8	8
No Yes	Chlamydia trachomatis B/TZ1A828/OT		4	4
No Yes	Chlamydia trachomatis B/Jali20/OT		4	4
No Yes	Chlamydia trachomatis L2b/UCH-1/proctitis		4	4
No Yes	Chlamydia trachomatis 434/Bu		4	4
No Yes	Chlamydia trachomatis A/HAR-13		4	4
No Yes	Thermus thermophilus HB8		13	13
No Yes	Desulfitobacterium hafniense DCB-2		19	19
No Yes	Clostridium kluyveri NBRC 12016		13	13
No Yes	Clostridium perfringens SM101		10	10
No Yes	Clostridium perfringens ATCC 13124		14	14
No Yes	Clostridium difficile R20291		17	17
No Yes	Clostridium difficile CD196		17	17
No Yes	Clostridium botulinum F Langeland		14	14
No Yes	Clostridium botulinum E3 Alaska E43		15	15
No Yes	Clostridium botulinum B1 Okra		18	18
No Yes	Clostridium botulinum Ba4 657		17	17
No Yes	Clostridium botulinum B Eklund 17B		16	16
No Yes	Clostridium botulinum A2 Kyoto		14	14
No Yes	Clostridium botulinum A3 Loch Maree		13	13
No Yes	Clostridium botulinum A Hall		13	13
No Yes	Clostridium botulinum A ATCC 19397		14	14
No Yes	Lactobacillus casei BL23		26	26
No Yes	Lactobacillus rhamnosus Lc 705		28	28
No Yes	Lactobacillus johnsonii FI9785		18	18
No Yes	Lactobacillus reuteri JCM 1112		16	16
No Yes	Lactobacillus plantarum JDM1		33	33
No Yes	Lactobacillus delbrueckii ssp. bulgaricus ATCC BAA-365		16	16
No Yes	Lactococcus lactis ssp. lactis KF147		17	17
No Yes	Lactococcus lactis ssp. cremoris MG1363		12	12
No Yes	Lactococcus lactis ssp. cremoris SK11		11	11
No Yes	Streptococcus equi ssp. equi 4047		12	12
No Yes	Streptococcus equi ssp. zooepidemicus		11	11
No Yes	Streptococcus pyogenes MGAS10750		5	5
No Yes	Streptococcus pyogenes MGAS10270		5	5
No Yes	Streptococcus pyogenes MGAS2096		5	5
No Yes	Streptococcus pyogenes MGAS9429		5	5
No Yes	Streptococcus pyogenes MGAS6180		5	5
No Yes	Streptococcus pyogenes NZ131		5	5
No Yes	Streptococcus pyogenes MGAS8232		5	5
No Yes	Streptococcus pyogenes MGAS10394		5	5
No Yes	Streptococcus pyogenes Manfredo		5	5
No Yes	Streptococcus pyogenes MGAS315		5	5
No Yes	Streptococcus pyogenes SSI-1		5	5
No Yes	Streptococcus pyogenes MGAS5005		5	5
No Yes	Streptococcus pneumoniae ATCC 700669		9	9
No Yes	Streptococcus pneumoniae CGSP14		11	11
No Yes	Streptococcus pneumoniae G54		10	10
No Yes	Streptococcus pneumoniae P1031		9	9
No Yes	Streptococcus pneumoniae JJA		9	9
No Yes	Streptococcus pneumoniae 70585		11	11
No Yes	Streptococcus pneumoniae Hungary19A-6		12	12
No Yes	Streptococcus pneumoniae Taiwan19F-14		9	9
No Yes	Streptococcus pneumoniae D39		10	10
No Yes	Streptococcus pneumoniae R6 (Non-virulent)		10	10
No Yes	Streptococcus agalactiae A909		18	18
No Yes	Streptococcus agalactiae 2603V/R		18	18
No Yes	Streptococcus mutans NN2025		18	18
No Yes	Streptococcus thermophilus LMD-9		6	6
No Yes	Streptococcus thermophilus CNRZ1066 (Younger strain)		7	7
No Yes	Streptococcus suis BM407		7	7
No Yes	Streptococcus suis SC84		8	8
No Yes	Streptococcus suis 98HAH33		9	9
No Yes	Streptococcus suis P1/7		8	8
No Yes	Listeria monocytogenes 08-5578		26	26
No Yes	Listeria monocytogenes 08-5923		26	26
No Yes	Listeria monocytogenes Clip80459		26	26
No Yes	Listeria monocytogenes HCC23		28	28
No Yes	Listeria monocytogenes 4b F2365		26	26
No Yes	Geobacillus sp. Y412MC61		12	12
No Yes	Geobacillus sp. Y412MC10		65	64
No Yes	Bacillus licheniformis ATCC 14580		37	36
No Yes	Bacillus cytotoxicus NVH 391-98		30	30
No Yes	Bacillus thuringiensis Al Hakam		51	51
No Yes	Bacillus cereus 03BB102		54	54
No Yes	Bacillus cereus AH820		53	53
No Yes	Bacillus cereus AH187		48	48
No Yes	Bacillus cereus B4264		55	54
No Yes	Bacillus cereus G9842		49	49
No Yes	Bacillus cereus Q1		46	46
No Yes	Bacillus cereus E33L		55	55
No Yes	Bacillus cereus ATCC 10987		54	54
No Yes	Bacillus anthracis A0248		50	50
No Yes	Bacillus anthracis CDC 684		55	55
No Yes	Bacillus anthracis Sterne		55	55
No Yes	Bacillus anthracis Ames		53	53
No Yes	Bacillus megaterium DSM319		41	41
No Yes	Staphylococcus epidermidis ATCC 12228		24	24
No Yes	Staphylococcus aureus RF122		26	26
No Yes	Staphylococcus aureus ssp. aureus ED98		26	26
No Yes	Staphylococcus aureus ssp. aureus Newman		26	26
No Yes	Staphylococcus aureus ssp. aureus Mu3		26	26
No Yes	Staphylococcus aureus ssp. aureus USA300_TCH1516		26	26
No Yes	Staphylococcus aureus ssp. aureus USA300_FPR3757		26	26
No Yes	Staphylococcus aureus ssp. aureus JH1		26	26
No Yes	Staphylococcus aureus ssp. aureus JH9		26	26
No Yes	Staphylococcus aureus ssp. aureus MSSA476		26	26
No Yes	Staphylococcus aureus ssp. aureus MRSA252		25	25
No Yes	Staphylococcus aureus ssp. aureus MW2		26	26
No Yes	Staphylococcus aureus ssp. aureus N315		26	26
No Yes	Staphylococcus aureus ssp. aureus Mu50		26	26
No Yes	Staphylococcus aureus ssp. aureus COL		26	26
No Yes	Campylobacter jejuni RM1221		5	5
No Yes	Campylobacter jejuni ssp. jejuni 81116		3	3
No Yes	Campylobacter jejuni ssp. jejuni 81-176		5	5
No Yes	Campylobacter jejuni ssp. doylei 269.97		5	5
No Yes	Helicobacter pylori B38		2	2
No Yes	Helicobacter pylori P12		2	2
No Yes	Helicobacter pylori G27		2	2
No Yes	Helicobacter pylori Shi470		2	2
No Yes	Helicobacter pylori HPAG1		2	2
No Yes	Helicobacter pylori J99		2	2
No Yes	Desulfovibrio vulgaris DP4		7	7
No Yes	Desulfovibrio vulgaris Miyazaki F		9	9
No Yes	Desulfovibrio desulfuricans ssp. desulfuricans ATCC 27774		6	6
No Yes	Geobacter sp. M21		16	16
No Yes	Anaeromyxobacter sp. K		38	36
No Yes	Anaeromyxobacter dehalogenans 2CP-1		40	38
No Yes	Azoarcus sp. BH72		44	44
No Yes	Neisseria meningitidis alpha14		9	9
No Yes	Neisseria meningitidis 053442		7	7
No Yes	Neisseria meningitidis FAM18		9	9
No Yes	Neisseria meningitidis MC58		9	9
No Yes	Neisseria gonorrhoeae NCCP11945		9	9
No Yes	Ralstonia eutropha H16		98	98
No Yes	Ralstonia pickettii 12D		60	59
No Yes	Polynucleobacter necessarius ssp. necessarius STIR1		9	9
No Yes	Burkholderia sp. CCGE1002		91	89
No Yes	Burkholderia pseudomallei MSHR346		42	41
No Yes	Burkholderia pseudomallei 1106a		93	90
No Yes	Burkholderia pseudomallei 668		94	91
No Yes	Burkholderia pseudomallei 1710b		89	86
No Yes	Burkholderia mallei NCTC 10229		63	60
No Yes	Burkholderia mallei NCTC 10247		64	61
No Yes	Burkholderia mallei SAVP1		50	49
No Yes	Burkholderia ambifaria MC40-6		91	89
No Yes	Burkholderia cenocepacia MC0-3		113	111
No Yes	Burkholderia cenocepacia HI2424		110	108
No Yes	Burkholderia cenocepacia J2315		115	113
No Yes	Burkholderia multivorans ATCC 17616		71	69
No Yes	Caulobacter crescentus NA1000		66	66
No Yes	Zymomonas mobilis ssp. mobilis NCIMB 11163		17	17
No Yes	Rhodobacter sphaeroides KD131		31	31
No Yes	Rhodobacter sphaeroides ATCC 17025		21	21
No Yes	Rhodobacter sphaeroides ATCC 17029		30	30
No Yes	Gluconacetobacter diazotrophicus PAl 5		30	30
No Yes	Ehrlichia ruminantium Gardel		3	3
No Yes	Ehrlichia ruminantium Welgevonden		3	3
No Yes	Anaplasma marginale Florida		4	4
No Yes	Orientia tsutsugamushi Ikeda		9	9
No Yes	Rickettsia bellii OSU 85-389		13	13
No Yes	Rickettsia rickettsii Iowa		10	10
No Yes	Methylobacterium extorquens DM4		57	57
No Yes	Methylobacterium extorquens AM1		52	52
No Yes	Brucella suis ATCC 23445		19	19
No Yes	Brucella melitensis ATCC 23457		19	19
No Yes	Brucella abortus S19		23	22
No Yes	Brucella melitensis biov. Abortus 2308		23	23
No Yes	Rhizobium etli CIAT 652		47	45
No Yes	Rhizobium leguminosarum bv. trifolii WSM2304		55	53
No Yes	Rhizobium leguminosarum bv. trifolii WSM1325		59	57
No Yes	Rhodopseudomonas palustris TIE-1		58	58
No Yes	Rhodopseudomonas palustris HaA2		53	52
No Yes	Rhodopseudomonas palustris BisB5		42	42
No Yes	Rhodopseudomonas palustris BisB18		53	52
No Yes	Rhodopseudomonas palustris BisA53		48	48
No Yes	Bradyrhizobium sp. BTAi1		115	114
No Yes	Acidithiobacillus ferrooxidans ATCC 53993		12	12
No Yes	Haemophilus somnus 2336		7	7
No Yes	Haemophilus influenzae PittGG		6	6
No Yes	Haemophilus influenzae PittEE		5	5
No Yes	Haemophilus influenzae 86-028NP		5	5
No Yes	Actinobacillus pleuropneumoniae ser. 3 JL03		9	9
No Yes	Actinobacillus pleuropneumoniae ser. 7 AP76		10	10
No Yes	Vibrio fischeri MJ11		24	24
No Yes	Vibrio vulnificus CMCP6 (Poor annotation)		28	28
No Yes	Vibrio cholerae M66-2		20	20
No Yes	Vibrio cholerae O395		21	21
No Yes	Vibrio cholerae MJ-1236		20	20
No Yes	Shewanella sp. W3-18-1		32	32
No Yes	Shewanella sp. ANA-3		45	45
No Yes	Shewanella baltica OS223		41	41
No Yes	Shewanella baltica OS185		47	47
No Yes	Shewanella baltica OS195		42	42
No Yes	Shewanella sp. MR-4		44	44
No Yes	Stenotrophomonas maltophilia K279a		63	62
No Yes	Xylella fastidiosa M23		23	22
No Yes	Xylella fastidiosa M12		20	19
No Yes	Xylella fastidiosa Temecula1		23	22
No Yes	Xanthomonas campestris pv. vesicatoria 85-10 (Completed 2005)		73	71
No Yes	Xanthomonas oryzae pv. oryzae PXO99A		59	56
No Yes	Xanthomonas oryzae pv. oryzae MAFF 311018		63	58
No Yes	Xanthomonas campestris pv. campestris B100		74	72
No Yes	Xanthomonas campestris pv. campestris 8004 (Completed 2005)		77	75
No Yes	Thioalkalivibrio sp. K90mix		18	18
No Yes	Coxiella burnetii CbuK_Q154		7	7
No Yes	Coxiella burnetii CbuG_Q212		7	7
No Yes	Coxiella burnetii Dugway 5J108-111		10	10
No Yes	Coxiella burnetii RSA 331		7	7
No Yes	Legionella pneumophila Corby		47	46
No Yes	Legionella pneumophila Paris		44	44
No Yes	Legionella pneumophila Lens		39	39
No Yes	Dickeya dadantii Ech586		45	44
No Yes	Candidatus Blochmannia pennsylvanicus BPEN		1	1
No Yes	Buchnera aphidicola Cc		1	1
No Yes	Buchnera aphidicola Bp		1	1
No Yes	Yersinia pseudotuberculosis PB1/+		25	25
No Yes	Yersinia pseudotuberculosis YPIII		23	23
No Yes	Yersinia pseudotuberculosis IP 31758		24	24
No Yes	Yersinia pestis Z176003		23	23
No Yes	Yersinia pestis Pestoides F		24	24
No Yes	Yersinia pestis Nepal516		24	24
No Yes	Yersinia pestis Antiqua		26	26
No Yes	Yersinia pestis Angola		24	24
No Yes	Yersinia pestis biov. Microtus 91001		25	25
No Yes	Yersinia pestis KIM		25	25
No Yes	Shigella flexneri 5 8401		23	23
No Yes	Shigella flexneri 2a 301		22	22
No Yes	Shigella boydii CDC 3083-94		19	19
No Yes	Salmonella enterica ssp. arizonae ser. 62:z4,z23:--		24	23
No Yes	Salmonella enterica ssp. enterica ser. Schwarzengrund CVM19633		23	23
No Yes	Salmonella enterica ssp. enterica ser. Enteritidis P125109		24	24
No Yes	Salmonella enterica ssp. enterica ser. Choleraesuis str. SC-B67		21	21
No Yes	Salmonella enterica ssp. enterica ser. Newport SL254		24	24
No Yes	Salmonella enterica ssp. enterica ser. Dublin CT_02021853		23	23
No Yes	Salmonella enterica ssp. enterica ser. Typhi CT18		21	21
No Yes	Salmonella enterica ssp. enterica ser. Typhi Ty2		21	21
No Yes	Salmonella enterica ssp. enterica ser. Agona SL483		24	24
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi C RKS4594		25	25
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi B SPB7		25	25
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi A AKU_12601		22	22
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi A ATCC 9150		22	22
No Yes	Salmonella enterica ssp. enterica ser. Heidelberg SL476		22	22
No Yes	Salmonella enterica ssp. enterica ser. Gallinarum 287/91		22	22
No Yes	Klebsiella pneumoniae 342		35	35
No Yes	Klebsiella pneumoniae NTUH-K2044		36	36
No Yes	Escherichia coli ED1a		27	27
No Yes	Escherichia coli IAI39		26	26
No Yes	Escherichia coli UMN026		29	29
No Yes	Escherichia coli 55989		27	27
No Yes	Escherichia coli S88		29	29
No Yes	Escherichia coli IAI1		25	25
No Yes	Escherichia coli BL21		25	25
No Yes	Escherichia coli ATCC 8739		23	23
No Yes	Escherichia coli BL21(DE3)		24	24
No Yes	Escherichia coli SMS-3-5		25	25
No Yes	Escherichia coli SE11		27	27
No Yes	Escherichia coli APEC O1		30	30
No Yes	Escherichia coli O103:H2 12009		28	28
No Yes	Escherichia coli UTI89		31	31
No Yes	Escherichia coli 536		31	31
No Yes	Escherichia coli HS		22	22
No Yes	Escherichia coli E24377A		26	26
No Yes	Escherichia coli O55:H7 CB9615		27	27
No Yes	Escherichia coli O26:H11 11368		31	31
No Yes	Escherichia coli CFT073		35	35
No Yes	Escherichia coli O111:H- 11128		27	27
No Yes	Escherichia coli O127:H6 E2348/69		24	24
No Yes	Escherichia coli O157:H7 EDL933		29	29
No Yes	Escherichia coli O157:H7 TW14359		28	28
No Yes	Escherichia coli O157:H7 EC4115		28	28
No Yes	Escherichia coli O157:H7 Sakai		27	27
No Yes	Escherichia coli BW2952		22	22
No Yes	Escherichia coli K-12 subW3110		23	23
No Yes	Escherichia coli K-12 subDH10B		25	25
No Yes	Escherichia coli B REL606		25	25
No Yes	Erwinia amylovora CFBP1430		19	19
No Yes	Pseudomonas syringae pv. phaseolicola 1448A		63	62
No Yes	Pseudomonas syringae pv. syringae B728a		70	67
No Yes	Pseudomonas putida W619		62	62
No Yes	Pseudomonas putida F1		55	55
No Yes	Pseudomonas putida GB-1		59	59
No Yes	Pseudomonas fluorescens SBW25		81	79
No Yes	Pseudomonas fluorescens Pf0-1		81	80
No Yes	Pseudomonas aeruginosa LESB58		79	78
No Yes	Pseudomonas aeruginosa PA7		75	75
No Yes	Pseudomonas aeruginosa UCBPP-PA14		81	81
No Yes	Acinetobacter baumannii AB307-0294		54	54
No Yes	Acinetobacter baumannii AYE		51	51
No Yes	Acinetobacter baumannii SDF		31	31
No Yes	Acinetobacter baumannii AB0057		52	52
No Yes	Acinetobacter baumannii ACICU		49	49
No Yes	Francisella novicida U112		9	9
No Yes	Francisella tularensis ssp. mediasiatica FSC147		6	6
No Yes	Francisella tularensis ssp. holarctica FTNF002-00		7	7
No Yes	Francisella tularensis ssp. holarctica OSU18		7	7
No Yes	Francisella tularensis ssp. holarctica		7	7
No Yes	Francisella tularensis ssp. tularensis WY96-3418		8	8
No Yes	Francisella tularensis ssp. tularensis FSC198		7	7
No Yes	Prochlorococcus marinus NATL1A		12	12
No Yes	Prochlorococcus marinus MIT 9301		13	13
No Yes	Prochlorococcus marinus MIT 9515		13	13
No Yes	Prochlorococcus marinus AS9601		12	12
No Yes	Prochlorococcus marinus ssp. marinus CCMP1375		11	11
No Yes	Prochlorococcus marinus ssp. pastoris CCMP1986		13	13
No Yes	Prochlorococcus marinus MIT 9215		13	13
No Yes	Prochlorococcus marinus MIT 9211		11	11
No Yes	Prochlorococcus marinus MIT 9312		14	13
No Yes	Prochlorococcus marinus MIT 9303		19	19
No Yes	Prochlorococcus marinus NATL2A		13	13
No Yes	Cyanothece sp. PCC 8802		38	38
No Yes	Cyanothece sp. PCC 7425		53	53
No Yes	Cyanothece sp. PCC 7424		52	52
No Yes	Cyanothece sp. PCC 8801		38	38
No Yes	Synechococcus sp. JA-2-3Ba(2-13) (Poor annotation)		25	25
No Yes	Synechococcus sp. JA-3-3Ab (Poor annotation)		23	23
No Yes	Synechococcus sp. CC9902 (Poor annotation)		14	14
No Yes	Synechococcus sp. RCC307		19	19
No Yes	Synechococcus sp. CC9605 (Poor annotation)		17	17
No Yes	Synechococcus sp. WH 8102 (Good annotation)		18	18
No Yes	Synechococcus sp. CC9311		23	23
No Yes	Synechococcus sp. WH 7803		24	24
No Yes	Synechococcus sp. PCC 7002		28	28
No Yes	Synechococcus elongatus PCC 7942		28	28
No Yes	Methanococcus maripaludis C7		1	1
No Yes	Sulfolobus islandicus Y.G.57.14		10	10
No Yes	Sulfolobus islandicus L.S.2.15		10	10
No Yes	Sulfolobus islandicus M.16.27		11	11
No Yes	Sulfolobus islandicus M.14.25		11	11
No Yes	Sulfolobus islandicus M.16.4		13	13
No Yes	Sulfolobus islandicus L.D.8.5		11	11
No Yes	Ailuropoda melanoleuca (Draft)	Giant panda	125	124
No Yes	Moniliophthora perniciosa FA553 (Genome survey)		190	189
No Yes	Lotus japonicus (Early assembly)		56	56
No Yes	Prunus persica (Early draft)	Peach	340	338
No Yes	Manihot esculenta (Early draft)	Cassava	446	443
No Yes	Ricinus communis (Early assembly)	Castor bean	371	370
No Yes	Mimulus guttatus (Early draft)	Spotted monkey flower	326	326
No Yes	Phoenix dactylifera (Early draft)	Date palm	192	189
No Yes	Trypanosoma vivax (Parial)		44	44
No Yes	Trypanosoma congolense (Partial)		51	50
No Yes	Toxoplasma gondii GT1 (Early assembly)		51	50
No Yes	Toxoplasma gondii VEG (Early assembly)		48	47
No Yes	Toxoplasma gondii RH (Archived)		50	49
No Yes	Homo sapiens 49_36k (longest transcript per gene)	Human	131	131
No Yes	Pan troglodytes 49_21h (longest transcript per gene)	Chimpanzee	121	120
No Yes	Gorilla gorilla 52_1 (longest transcript per gene)	Western Gorilla	112	110
No Yes	Pongo pygmaeus 49_1 (longest transcript per gene)	Bornean orangutan	112	111
No Yes	Macaca mulatta 49_10h (longest transcript per gene)	Rhesus monkey	124	123
No Yes	Callithrix jacchus 56_3 (longest transcript per gene)	White-tufted-ear marmoset	121	120
No Yes	Otolemur garnettii 49_1c (longest transcript per gene)	Small-eared galago	109	108
No Yes	Microcebus murinus 49_1 (longest transcript per gene)	Gray mouse lemur	105	104
No Yes	Tarsius syrichta 51_1 (longest transcript per gene)	Philippine tarsier	87	87
No Yes	Rattus norvegicus 49_34s (longest transcript per gene)	Norway rat	130	128
No Yes	Mus musculus 49_37b (longest transcript per gene)	House mouse	145	144
No Yes	Spermophilus tridecemlineatus 49_1e (longest transcript per gene)	Thirteen-lined ground squirrel	103	101
No Yes	Dipodomys ordii 51_1 (longest transcript per gene)	Ord's kangaroo rat	119	116
No Yes	Cavia porcellus 51_3 (longest transcript per gene)	Domestic guinea pig	118	116
No Yes	Oryctolagus cuniculus 49_1f (longest transcript per gene)	Rabbit	119	118
No Yes	Ochotona princeps 49_1 (longest transcript per gene)	American pika	115	114
No Yes	Tupaia belangeri 49_1d (longest transcript per gene)	Northern tree shrew	92	91
No Yes	Sus scrofa 56_9 (longest transcript per gene)	Pig	82	82
No Yes	Bos taurus 49_3f (longest transcript per gene)	Cattle	120	120
No Yes	Vicugna pacos 51_1 (longest transcript per gene)	Alpaca	79	79
No Yes	Tursiops truncatus 51_1 (longest transcript per gene)	Bottlenosed dolphin	114	113
No Yes	Canis familiaris 49_2g (longest transcript per gene)	Dog	115	115
No Yes	Felis catus 49_1c (longest transcript per gene)	Domestic cat	91	90
No Yes	Equus caballus 49_2 (longest transcript per gene)	Horse	123	122
No Yes	Myotis lucifugus 49_1e (longest transcript per gene)	Little brown bat	94	94
No Yes	Pteropus vampyrus 51_1 (longest transcript per gene)	Large flying fox	110	110
No Yes	Sorex araneus 49_1c (longest transcript per gene)	European shrew	85	84
No Yes	Erinaceus europaeus 49_1c (longest transcript per gene)	Western European hedgehog	97	96
No Yes	Procavia capensis 51_1 (longest transcript per gene)	Cape rock hyrax	108	108
No Yes	Loxodonta africana 49_1d (longest transcript per gene)	African savanna elephant	94	93
No Yes	Echinops telfairi 49_1e (longest transcript per gene)	Small Madagascar hedgehog	97	95
No Yes	Dasypus novemcinctus 49_1f (longest transcript per gene)	Nine-banded armadillo	98	98
No Yes	Macropus eugenii 55_1 (longest transcript per gene)	Tammar wallaby	118	116
No Yes	Monodelphis domestica 49_5d (longest transcript per gene)	Gray short-tailed opossum	133	133
No Yes	Ornithorhynchus anatinus 49_1f (longest transcript per gene)	Platypus	101	101
No Yes	Anolis carolinensis 55_1a (longest transcript per gene)	Green anole	128	127
No Yes	Taeniopygia guttata 57_1c (longest transcript per gene)	Zebra finch	104	104
No Yes	Meleagris gallopavo 57_2 (longest transcript per gene)	Turkey	100	100
No Yes	Gallus gallus 49_2g (longest transcript per gene)	Chicken	100	100
No Yes	Xenopus tropicalis 49_41i (longest transcript per gene)	Western clawed frog	111	111
No Yes	Danio rerio 49_7c (longest transcript per gene)	Zebrafish	117	116
No Yes	Gasterosteus aculeatus 49_1f (longest transcript per gene)	Three-spined stickleback	129	128
No Yes	Oryzias latipes 49_1e (longest transcript per gene)	Japanese medaka	124	123
No Yes	Tetraodon nigroviridis 49_1k (longest transcript per gene)	Spotted green pufferfish	144	143
No Yes	Takifugu rubripes 49_4i (longest transcript per gene)	Torafugu	129	129
No Yes	Ciona savignyi 49_2f (longest transcript per gene)		85	85
No Yes	Ciona intestinalis 49_2i (longest transcript per gene)		91	91
No Yes	Apis mellifera 37.2d (longest transcript per gene) (Not maintained)	Honey bee	93	91
No Yes	Drosophila melanogaster FlyBase 5.12 (longest transcript per gene) (FlyBase)	Fruit fly	222	220
No Yes	Drosophila melanogaster Ensembl 49_54 (longest transcript per gene)	Fruit fly	160	158
No Yes	Aedes aegypti 49_1b (longest transcript per gene)	Yellow fever mosquito	227	225
No Yes	Anopheles gambiae 49_3j (longest transcript per gene)	African malaria mosquito	163	158
No Yes	Caenorhabditis elegans WormBase WS194 (longest transcript per gene) (WormBase)	Nematode	202	193
No Yes	Caenorhabditis elegans Ensembl 49_180a (longest transcript per gene)	Nematode	202	193
No Yes	Arabidopsis thaliana 9 (longest transcript per gene)	Thale cress	336	333
No Yes	Oryza sativa ssp. japonica 5.0 (Not transposons)	Japanese rice	562	558
No Yes	NCBI viral sequences (Viral)		101	101
No Yes	PDB chains (SCOP 1.73) (PDB)		225	225
No Yes	TargetDB (Targets)		2517	2495
No Yes	UniProt 15.0 (UniProt)		60394	59795
No Yes	UniProt 15.0 viral sequences (Viral)		138	137