Ribosomal protein S5 domain 2-like superfamily domain assignments
in
Saccharomyces cerevisiae SGD

Select to display	Genome		Domains	Proteins
No Yes	ALL		70911	70911
No Yes	Homo sapiens 49_36k (all transcripts)	Human	75	74
No Yes	Pan troglodytes 49_21h (all transcripts)	Chimpanzee	72	70
No Yes	Gorilla gorilla 52_1 (all transcripts)	Western Gorilla	33	32
No Yes	Pongo pygmaeus 49_1 (all transcripts)	Bornean orangutan	59	56
No Yes	Macaca mulatta 49_10h (all transcripts)	Rhesus monkey	89	87
No Yes	Callithrix jacchus 56_3 (all transcripts)	White-tufted-ear marmoset	88	87
No Yes	Otolemur garnettii 49_1c (all transcripts)	Small-eared galago	34	33
No Yes	Microcebus murinus 49_1 (all transcripts)	Gray mouse lemur	33	32
No Yes	Tarsius syrichta 51_1 (all transcripts)	Philippine tarsier	29	28
No Yes	Rattus norvegicus 49_34s (all transcripts)	Norway rat	110	109
No Yes	Mus musculus 49_37b (all transcripts)	House mouse	60	59
No Yes	Spermophilus tridecemlineatus 49_1e (all transcripts)	Thirteen-lined ground squirrel	31	30
No Yes	Dipodomys ordii 51_1 (all transcripts)	Ord's kangaroo rat	30	29
No Yes	Cavia porcellus 51_3 (all transcripts)	Domestic guinea pig	41	40
No Yes	Oryctolagus cuniculus 49_1f (all transcripts)	Rabbit	34	33
No Yes	Ochotona princeps 49_1 (all transcripts)	American pika	31	30
No Yes	Tupaia belangeri 49_1d (all transcripts)	Northern tree shrew	33	32
No Yes	Sus scrofa 56_9 (all transcripts)	Pig	30	30
No Yes	Bos taurus 49_3f (all transcripts)	Cattle	46	45
No Yes	Vicugna pacos 51_1 (all transcripts)	Alpaca	23	22
No Yes	Tursiops truncatus 51_1 (all transcripts)	Bottlenosed dolphin	32	31
No Yes	Canis familiaris 49_2g (all transcripts)	Dog	55	54
No Yes	Felis catus 49_1c (all transcripts)	Domestic cat	29	28
No Yes	Equus caballus 49_2 (all transcripts)	Horse	35	33
No Yes	Myotis lucifugus 49_1e (all transcripts)	Little brown bat	31	31
No Yes	Pteropus vampyrus 51_1 (all transcripts)	Large flying fox	35	34
No Yes	Sorex araneus 49_1c (all transcripts)	European shrew	28	27
No Yes	Erinaceus europaeus 49_1c (all transcripts)	Western European hedgehog	26	25
No Yes	Procavia capensis 51_1 (all transcripts)	Cape rock hyrax	31	30
No Yes	Loxodonta africana 49_1d (all transcripts)	African savanna elephant	25	25
No Yes	Echinops telfairi 49_1e (all transcripts)	Small Madagascar hedgehog	33	32
No Yes	Dasypus novemcinctus 49_1f (all transcripts)	Nine-banded armadillo	31	30
No Yes	Macropus eugenii 55_1 (all transcripts)	Tammar wallaby	31	31
No Yes	Monodelphis domestica 49_5d (all transcripts)	Gray short-tailed opossum	62	61
No Yes	Ornithorhynchus anatinus 49_1f (all transcripts)	Platypus	42	42
No Yes	Anolis carolinensis 55_1a (all transcripts)	Green anole	32	31
No Yes	Taeniopygia guttata 57_1c (all transcripts)	Zebra finch	33	32
No Yes	Meleagris gallopavo 57_2 (all transcripts)	Turkey	32	31
No Yes	Gallus gallus 49_2g (all transcripts)	Chicken	41	40
No Yes	Xenopus laevis	African clawed frog	66	66
No Yes	Xenopus tropicalis 49_41i (all transcripts)	Western clawed frog	48	47
No Yes	Danio rerio 49_7c (all transcripts)	Zebrafish	46	46
No Yes	Gasterosteus aculeatus 49_1f (all transcripts)	Three-spined stickleback	46	45
No Yes	Oryzias latipes 49_1e (all transcripts)	Japanese medaka	43	42
No Yes	Tetraodon nigroviridis 49_1k (all transcripts)	Spotted green pufferfish	39	38
No Yes	Takifugu rubripes 49_4i (all transcripts)	Torafugu	76	75
No Yes	Branchiostoma floridae 1.0	Florida lancelet	66	64
No Yes	Ciona savignyi 49_2f (all transcripts)		83	83
No Yes	Ciona intestinalis 49_2i (all transcripts)		58	58
No Yes	Strongylocentrotus purpuratus	Purple sea urchin	77	75
No Yes	Helobdella robusta		30	29
No Yes	Capitella sp. I		57	54
No Yes	Bombyx mori	Domestic silkworm	27	27
No Yes	Nasonia vitripennis	Jewel wasp	27	26
No Yes	Apis mellifera 37.2d (all transcripts) (Not maintained)	Honey bee	57	55
No Yes	Drosophila grimshawi 1.3		26	25
No Yes	Drosophila willistoni 1.3		30	29
No Yes	Drosophila pseudoobscura 2.3		29	28
No Yes	Drosophila persimilis 1.3		30	29
No Yes	Drosophila yakuba 1.3		27	26
No Yes	Drosophila simulans 1.3		21	20
No Yes	Drosophila sechellia 1.3		25	25
No Yes	Drosophila melanogaster Ensembl 49_54 (all transcripts)	Fruit fly	39	34
No Yes	Drosophila erecta 1.3		25	24
No Yes	Drosophila ananassae 1.3		26	25
No Yes	Drosophila virilis 1.2		26	25
No Yes	Drosophila mojavensis 1.3		25	24
No Yes	Aedes aegypti 49_1b (all transcripts)	Yellow fever mosquito	36	35
No Yes	Culex pipiens quinquefasciatus	Southern house mosquito	51	50
No Yes	Anopheles gambiae 49_3j (all transcripts)	African malaria mosquito	27	26
No Yes	Tribolium castaneum 3.0	Red flour beetle	30	29
No Yes	Pediculus humanus corporis (Early assembly)	Human body louse	32	30
No Yes	Acyrthosiphon pisum	Pea aphid	38	37
No Yes	Daphnia pulex	Common water flea	69	67
No Yes	Ixodes scapularis (Preliminary)	Black-legged tick	36	34
No Yes	Lottia gigantea		33	32
No Yes	Pristionchus pacificus		29	29
No Yes	Meloidogyne incognita	Southern root-knot nematode	53	53
No Yes	Meloidogyne hapla		30	29
No Yes	Brugia malayi	Agent of lymphatic filariasis	14	14
No Yes	Caenorhabditis japonica		31	30
No Yes	Caenorhabditis brenneri		32	31
No Yes	Caenorhabditis remanei		51	48
No Yes	Caenorhabditis elegans Ensembl 49_180a (all transcripts)	Nematode	68	67
No Yes	Caenorhabditis briggsae 2		34	33
No Yes	Schistosoma mansoni		30	30
No Yes	Nematostella vectensis 1.0	Starlet sea anemone	45	43
No Yes	Hydra magnipapillata		41	41
No Yes	Trichoplax adhaerens		34	33
No Yes	Proterospongia sp. ATCC 50818		34	33
No Yes	Monosiga brevicollis		36	34
No Yes	Capsaspora owczarzaki ATCC 30864		34	33
No Yes	Malassezia globosa CBS 7966		27	26
No Yes	Ustilago maydis		28	27
No Yes	Puccinia graminis f. sp. tritici CRL 75-36-700-3		33	32
No Yes	Melampsora laricis-populina		31	30
No Yes	Sporobolomyces roseus IAM 13481		26	25
No Yes	Serpula lacrymans var. lacrymans S7.9		23	23
No Yes	Coprinopsis cinerea okayama7 130		30	29
No Yes	Pleurotus ostreatus	Oyster mushroom	33	32
No Yes	Laccaria bicolor S238N-H82		37	36
No Yes	Agaricus bisporus var. bisporus		26	26
No Yes	Schizophyllum commune		30	29
No Yes	Heterobasidion annosum		32	31
No Yes	Phanerochaete chrysosporium RP-78 2.1		26	25
No Yes	Postia placenta		48	46
No Yes	Tremella mesenterica		31	30
No Yes	Cryptococcus neoformans JEC21		28	28
No Yes	Magnaporthe grisea 70-15		30	29
No Yes	Podospora anserina		30	29
No Yes	Sporotrichum thermophile ATCC 42464		31	30
No Yes	Thielavia terrestris NRRL 8126		30	29
No Yes	Chaetomium globosum CBS 148.51		30	29
No Yes	Neurospora tetrasperma		29	28
No Yes	Neurospora discreta FGSC 8579		29	28
No Yes	Neurospora crassa OR74A		29	28
No Yes	Cryphonectria parasitica	Chestnut blight fungus	31	30
No Yes	Fusarium oxysporum f. sp. lycopersici 4286		28	27
No Yes	Nectria haematococca mpVI		31	30
No Yes	Fusarium verticillioides 7600		29	28
No Yes	Fusarium graminearum		31	30
No Yes	Trichoderma atroviride		28	28
No Yes	Trichoderma reesei 1.2		29	28
No Yes	Trichoderma virens Gv29-8		30	29
No Yes	Verticillium dahliae VdLs.17		28	27
No Yes	Verticillium albo-atrum VaMs.102		28	27
No Yes	Botrytis cinerea B05.10		29	28
No Yes	Sclerotinia sclerotiorum		30	29
No Yes	Alternaria brassicicola		30	29
No Yes	Pyrenophora tritici-repentis		31	30
No Yes	Cochliobolus heterostrophus		31	30
No Yes	Stagonospora nodorum		31	30
No Yes	Mycosphaerella fijiensis CIRAD86		27	27
No Yes	Mycosphaerella graminicola IPO323		30	29
No Yes	Ajellomyces dermatitidis SLH14081		29	28
No Yes	Histoplasma capsulatum class NAmI strain WU24		24	23
No Yes	Microsporum gypseum		29	28
No Yes	Arthroderma benhamiae CBS 112371		28	27
No Yes	Microsporum canis CBS 113480		30	29
No Yes	Trichophyton equinum CBS 127.97		27	26
No Yes	Trichophyton verrucosum HKI 0517		29	28
No Yes	Trichophyton tonsurans CBS 112818		29	28
No Yes	Trichophyton rubrum CBS 118892		29	28
No Yes	Paracoccidioides brasiliensis Pb18		29	28
No Yes	Coccidioides posadasii RMSCC 3488		29	28
No Yes	Coccidioides immitis RS		29	28
No Yes	Uncinocarpus reesii 1704		26	25
No Yes	Aspergillus fumigatus Af293		29	28
No Yes	Neosartorya fischeri NRRL 181		29	28
No Yes	Penicillium chrysogenum Wisconsin 54-1255		29	28
No Yes	Penicillium marneffei ATCC 18224		30	29
No Yes	Aspergillus carbonarius ITEM 5010		28	27
No Yes	Aspergillus terreus NIH2624		29	28
No Yes	Aspergillus oryzae RIB40		28	27
No Yes	Aspergillus niger ATCC 1015		15	15
No Yes	Aspergillus flavus NRRL3357		27	26
No Yes	Aspergillus clavatus NRRL 1		29	28
No Yes	Aspergillus nidulans FGSC A4		30	29
No Yes	Tuber melanosporum Vittad	Perigord truffle	29	28
No Yes	Candida dubliniensis CD36		26	25
No Yes	Candida tropicalis MYA-3404		25	24
No Yes	Candida parapsilosis		26	25
No Yes	Candida albicans SC5314		27	26
No Yes	Yarrowia lipolytica CLIB122		29	28
No Yes	Candida lusitaniae ATCC 42720		27	26
No Yes	Vanderwaltozyma polyspora DSM 70294		31	30
No Yes	Candida glabrata CBS138		28	27
No Yes	Kluyveromyces thermotolerans CBS 6340		29	28
No Yes	Lachancea kluyveri		30	29
No Yes	Kluyveromyces waltii		25	24
No Yes	Lodderomyces elongisporus NRRL YB-4239		25	24
No Yes	Ashbya gossypii ATCC 10895		30	29
No Yes	Debaromyces hansenii		28	27
No Yes	Zygosaccharomyces rouxii		29	28
No Yes	Saccharomyces mikatae MIT		32	32
No Yes	Saccharomyces paradoxus MIT		30	30
No Yes	Saccharomyces cerevisiae SGD (SGD)	Baker's yeast	33	32
No Yes	Saccharomyces bayanus MIT		28	27
No Yes	Candida guilliermondii ATCC 6260		30	29
No Yes	Pichia stipitis CBS 6054		26	26
No Yes	Pichia pastoris GS115		27	26
No Yes	Kluyveromyces lactis		29	28
No Yes	Schizosaccharomyces octosporus yFS286		30	29
No Yes	Schizosaccharomyces japonicus yFS275		31	30
No Yes	Schizosaccharomyces pombe	Fission yeast	30	29
No Yes	Allomyces macrogynus ATCC 38327		54	52
No Yes	Rhizopus oryzae RA 99-880		50	49
No Yes	Phycomyces blakesleeanus		42	41
No Yes	Mucor circinelloides		40	39
No Yes	Encephalitozoon intestinalis		14	14
No Yes	Encephalitozoon cuniculi		14	14
No Yes	Spizellomyces punctatus DAOM BR117		33	32
No Yes	Batrachochytrium dendrobatidis JEL423		32	30
No Yes	Dictyostelium discoideum		32	32
No Yes	Dictyostelium purpureum		31	31
No Yes	Entamoeba dispar		27	27
No Yes	Entamoeba invadens		20	20
No Yes	Entamoeba histolytica 1		32	32
No Yes	Arabidopsis lyrata	Lyrate rockcress	79	72
No Yes	Arabidopsis thaliana 9 (all transcripts)	Thale cress	107	93
No Yes	Carica papaya	Papaya	53	50
No Yes	Medicago truncatula	Barrel medic	58	55
No Yes	Glycine max	Soybean	112	106
No Yes	Cucumis sativus	Cucumber	97	91
No Yes	Populus trichocarpa 1.1	Black cottonwood	99	92
No Yes	Vitis vinifera	Wine grape	58	54
No Yes	Brachypodium distachyon		80	76
No Yes	Oryza sativa ssp. japonica 5.0	Japanese rice	102	94
No Yes	Zea mays subsp. mays	Maize	117	112
No Yes	Sorghum bicolor	Sorghum	61	57
No Yes	Selaginella moellendorffii		114	106
No Yes	Physcomitrella patens subsp. patens		76	73
No Yes	Coccomyxa sp. C-169		38	35
No Yes	Chlorella sp. NC64A		34	33
No Yes	Chlorella vulgaris		37	34
No Yes	Volvox carteri f. nagariensis		39	35
No Yes	Chlamydomonas reinhardtii 4.0		35	32
No Yes	Ostreococcus sp. RCC809		45	41
No Yes	Ostreococcus lucimarinus CCE9901		46	42
No Yes	Ostreococcus tauri		42	38
No Yes	Micromonas sp. RCC299		48	44
No Yes	Micromonas pusilla CCMP1545		43	39
No Yes	Cyanidioschyzon merolae		39	35
No Yes	Giardia lamblia		15	15
No Yes	Trypanosoma cruzi strain CL Brener		60	60
No Yes	Trypanosoma brucei		29	29
No Yes	Leishmania mexicana		30	30
No Yes	Leishmania major strain Friedlin		46	46
No Yes	Leishmania infantum JPCM5		33	33
No Yes	Leishmania braziliensis MHOM/BR/75/M2904		30	30
No Yes	Aureococcus anophagefferens		35	33
No Yes	Phytophthora ramorum 1.1	Sudden oak death agent	42	39
No Yes	Phytophthora sojae 1.1		39	36
No Yes	Phytophthora infestans T30-4		44	40
No Yes	Phytophthora capsici		53	50
No Yes	Phaeodactylum tricornutum		42	38
No Yes	Fragilariopsis cylindrus		62	59
No Yes	Thalassiosira pseudonana		44	41
No Yes	Paramecium tetraurelia		68	68
No Yes	Tetrahymena thermophila SB210 1		32	32
No Yes	Babesia bovis T2Bo		24	24
No Yes	Theileria parva		23	23
No Yes	Theileria annulata		24	24
No Yes	Plasmodium falciparum 3D7		22	22
No Yes	Plasmodium vivax SaI-1		23	23
No Yes	Plasmodium knowlesi strain H		22	22
No Yes	Plasmodium yoelii ssp. yoelii 1		24	24
No Yes	Plasmodium chabaudi		25	25
No Yes	Plasmodium berghei ANKA		25	25
No Yes	Cryptosporidium hominis		11	11
No Yes	Cryptosporidium muris		18	18
No Yes	Cryptosporidium parvum Iowa II		17	17
No Yes	Neospora caninum Nc-Liverpool		29	29
No Yes	Neospora caninum		27	27
No Yes	Toxoplasma gondii ME49		29	29
No Yes	Naegleria gruberi		35	35
No Yes	Trichomonas vaginalis		45	45
No Yes	Guillardia theta		9	9
No Yes	Emiliania huxleyi CCMP1516		72	67
No Yes	Candidatus Phytoplasma mali		8	7
No Yes	Aster yellows witches-broom phytoplasma AYWB		8	7
No Yes	Onion yellows phytoplasma OY-M		8	7
No Yes	Acholeplasma laidlawii PG-8A		16	15
No Yes	Mesoplasma florum L1		8	8
No Yes	Ureaplasma parvum ser. 3 ATCC 700970		9	9
No Yes	Ureaplasma urealyticum ser. 10 ATCC 33699		9	9
No Yes	Mycoplasma mycoides ssp. mycoides SC PG1		8	8
No Yes	Mycoplasma capricolum ssp. capricolum ATCC 27343		8	8
No Yes	Mycoplasma crocodyli MP145		8	8
No Yes	Mycoplasma conjunctivae		7	7
No Yes	Mycoplasma penetrans HF-2		9	9
No Yes	Mycoplasma mobile 163K		7	7
No Yes	Mycoplasma arthritidis 158L3-1		8	8
No Yes	Mycoplasma agalactiae PG2		8	8
No Yes	Mycoplasma synoviae 53		9	9
No Yes	Mycoplasma pulmonis UAB CTIP		8	8
No Yes	Mycoplasma pneumoniae M129		7	7
No Yes	Mycoplasma hyopneumoniae 232		7	7
No Yes	Mycoplasma hominis		8	8
No Yes	Mycoplasma genitalium G37		7	7
No Yes	Mycoplasma gallisepticum R		10	10
No Yes	Aminobacterium colombiense DSM 12261		21	18
No Yes	Thermanaerovibrio acidaminovorans DSM 6589		22	19
No Yes	Brachyspira hyodysenteriae WA1		21	18
No Yes	Leptospira borgpetersenii ser. Hardjo-bovis L550		19	16
No Yes	Leptospira interrogans ser. Lai 56601		21	18
No Yes	Leptospira biflexa ser. Patoc Patoc 1 (Paris)		19	16
No Yes	Treponema pallidum ssp. pallidum Nichols		15	14
No Yes	Treponema denticola ATCC 35405		19	18
No Yes	Borrelia garinii PBi		18	17
No Yes	Borrelia afzelii PKo		18	17
No Yes	Borrelia burgdorferi B31		18	17
No Yes	Borrelia recurrentis A1		18	17
No Yes	Borrelia duttonii Ly		18	17
No Yes	Borrelia turicatae 91E135		19	18
No Yes	Borrelia hermsii DAH		19	18
No Yes	Rhodopirellula baltica SH 1		21	18
No Yes	Pirellula staleyi DSM 6068		19	16
No Yes	Gardnerella vaginalis 409-05		17	16
No Yes	Bifidobacterium longum NCC2705		19	17
No Yes	Bifidobacterium animalis ssp. lactis AD011		19	17
No Yes	Bifidobacterium dentium Bd1		19	17
No Yes	Bifidobacterium adolescentis ATCC 15703		18	16
No Yes	Kineococcus radiotolerans SRS30216		18	16
No Yes	Catenulispora acidiphila DSM 44928		25	23
No Yes	Stackebrandtia nassauensis DSM 44728		22	20
No Yes	Acidothermus cellulolyticus 11B		18	16
No Yes	Nakamurella multipartita DSM 44233		20	18
No Yes	Geodermatophilus obscurus DSM 43160		17	15
No Yes	Frankia sp. CcI3		20	18
No Yes	Frankia alni ACN14a		21	18
No Yes	Thermobifida fusca YX		19	17
No Yes	Thermomonospora curvata DSM 43183		22	20
No Yes	Streptosporangium roseum DSM 43021		20	18
No Yes	Streptomyces griseus ssp. griseus NBRC 13350		24	22
No Yes	Streptomyces avermitilis MA-4680		24	22
No Yes	Streptomyces scabiei 87.22		23	21
No Yes	Streptomyces coelicolor A3(2)		26	24
No Yes	Actinosynnema mirum DSM 43827		23	21
No Yes	Saccharomonospora viridis DSM 43017		19	17
No Yes	Saccharopolyspora erythraea NRRL 2338		19	17
No Yes	Kribbella flavida DSM 17836		22	20
No Yes	Nocardioides sp. JS614		20	18
No Yes	Propionibacterium acnes KPA171202		19	17
No Yes	Salinispora arenicola CNS-205		19	17
No Yes	Salinispora tropica CNB-440		18	16
No Yes	Gordonia bronchialis DSM 43247		17	15
No Yes	Rhodococcus jostii RHA1		19	17
No Yes	Rhodococcus opacus B4		19	17
No Yes	Rhodococcus erythropolis PR4		18	16
No Yes	Nocardia farcinica IFM 10152		22	20
No Yes	Mycobacterium abscessus		16	14
No Yes	Mycobacterium sp. MCS		18	16
No Yes	Mycobacterium avium ssp. paratuberculosis K-10		20	18
No Yes	Mycobacterium vanbaalenii PYR-1		18	16
No Yes	Mycobacterium tuberculosis H37Rv		19	17
No Yes	Mycobacterium bovis AF2122/97		19	17
No Yes	Mycobacterium ulcerans Agy99		19	17
No Yes	Mycobacterium gilvum PYR-GCK		18	16
No Yes	Mycobacterium marinum M		22	20
No Yes	Mycobacterium smegmatis MC2 155		20	18
No Yes	Mycobacterium leprae TN		14	12
No Yes	Corynebacterium aurimucosum		17	15
No Yes	Corynebacterium kroppenstedtii DSM 44385		20	18
No Yes	Corynebacterium efficiens YS-314		17	15
No Yes	Corynebacterium urealyticum DSM 7109		16	14
No Yes	Corynebacterium jeikeium K411		17	15
No Yes	Corynebacterium glutamicum ATCC 13032 Kitasato		18	16
No Yes	Corynebacterium diphtheriae NCTC 13129		18	16
No Yes	Tropheryma whipplei Twist		13	12
No Yes	Sanguibacter keddieii DSM 10542		18	16
No Yes	Kytococcus sedentarius DSM 20547		17	15
No Yes	Beutenbergia cavernae DSM 12333		18	16
No Yes	Leifsonia xyli ssp. xyli CTCB07		16	14
No Yes	Clavibacter michiganensis ssp. michiganensis NCPPB 382		17	15
No Yes	Jonesia denitrificans DSM 20603		18	16
No Yes	Brachybacterium faecium DSM 4810		18	16
No Yes	Xylanimonas cellulosilytica DSM 15894		19	17
No Yes	Kocuria rhizophila DC2201		18	16
No Yes	Rothia mucilaginosa DY-18		16	15
No Yes	Arthrobacter sp. FB24		19	17
No Yes	Arthrobacter chlorophenolicus A6		18	16
No Yes	Arthrobacter aurescens TC1		19	17
No Yes	Renibacterium salmoninarum ATCC 33209		20	18
No Yes	Micrococcus luteus NCTC 2665		17	15
No Yes	Cryptobacterium curtum DSM 15641		12	11
No Yes	Eggerthella lenta DSM 2243		15	13
No Yes	Slackia heliotrinireducens DSM 20476		17	15
No Yes	Atopobium parvulum DSM 20469		14	13
No Yes	Conexibacter woesei DSM 14684		18	16
No Yes	Rubrobacter xylanophilus DSM 9941		17	15
No Yes	Acidimicrobium ferrooxidans DSM 10331		14	12
No Yes	Denitrovibrio acetiphilus DSM 12809		20	17
No Yes	Deferribacter desulfuricans SSM1		20	17
No Yes	Kosmotoga olearia TBF 19.5.1		15	14
No Yes	Petrotoga mobilis SJ95		19	17
No Yes	Fervidobacterium nodosum Rt17-B1		16	15
No Yes	Thermosipho melanesiensis BI429		15	14
No Yes	Thermosipho africanus TCF52B		15	14
No Yes	Thermotoga lettingae TMO		16	15
No Yes	Thermotoga sp. RQ2		19	17
No Yes	Thermotoga naphthophila RKU-10		19	17
No Yes	Thermotoga petrophila RKU-1		19	17
No Yes	Thermotoga neapolitana DSM 4359		19	17
No Yes	Thermotoga maritima MSB8		19	17
No Yes	Dehalococcoides sp. CBDB1		15	13
No Yes	Dehalococcoides ethenogenes 195		16	14
No Yes	Thermomicrobium roseum DSM 5159		17	15
No Yes	Sphaerobacter thermophilus DSM 20745		21	19
No Yes	Herpetosiphon aurantiacus ATCC 23779		24	22
No Yes	Roseiflexus sp. RS-1		26	24
No Yes	Roseiflexus castenholzii DSM 13941		26	24
No Yes	Chloroflexus sp. Y-400-fl		25	23
No Yes	Chloroflexus aggregans DSM 9485		26	24
No Yes	Chloroflexus aurantiacus J-10-fl		24	22
No Yes	Sulfurihydrogenibium sp. YO3AOP1		18	15
No Yes	Sulfurihydrogenibium azorense Az-Fu1		17	14
No Yes	Persephonella marina EX-H1		18	15
No Yes	Hydrogenobaculum sp. Y04AAS1		16	13
No Yes	Thermocrinis albus DSM 14484		17	14
No Yes	Aquifex aeolicus VF5		17	14
No Yes	Hydrogenobacter thermophilus TK-6		18	15
No Yes	Gemmatimonas aurantiaca T-27		23	20
No Yes	Fibrobacter succinogenes ssp. succinogenes S85		18	16
No Yes	Candidatus Koribacter versatilis Ellin345		21	18
No Yes	Candidatus Solibacter usitatus Ellin6076		23	20
No Yes	Acidobacterium capsulatum ATCC 51196		21	18
No Yes	Elusimicrobium minutum Pei191		17	14
No Yes	uncultured Termite group 1 bacterium phylotype Rs-D17		14	12
No Yes	Pelodictyon phaeoclathratiforme BU-1		19	16
No Yes	Pelodictyon luteolum DSM 273		18	15
No Yes	Chlorobium chlorochromatii CaD3		18	15
No Yes	Chlorobium phaeobacteroides DSM 266		18	15
No Yes	Chlorobium phaeovibrioides DSM 265		18	15
No Yes	Chlorobium limicola DSM 245		19	16
No Yes	Chlorobaculum parvum NCIB 8327		19	16
No Yes	Chlorobium tepidum TLS		18	15
No Yes	Chloroherpeton thalassium ATCC 35110		19	16
No Yes	Prosthecochloris aestuarii DSM 271		20	17
No Yes	Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2		16	13
No Yes	Prevotella ruminicola 23		24	21
No Yes	Parabacteroides distasonis ATCC 8503		22	19
No Yes	Porphyromonas gingivalis W83		19	17
No Yes	Bacteroides vulgatus ATCC 8482		22	19
No Yes	Bacteroides thetaiotaomicron VPI-5482		23	20
No Yes	Bacteroides fragilis NCTC 9343		23	20
No Yes	Candidatus Amoebophilus asiaticus 5a2		15	13
No Yes	Salinibacter ruber DSM 13855		18	16
No Yes	Rhodothermus marinus DSM 4252		20	18
No Yes	Chitinophaga pinensis DSM 2588		24	21
No Yes	Dyadobacter fermentans DSM 18053		23	20
No Yes	Cytophaga hutchinsonii ATCC 33406		21	18
No Yes	Spirosoma linguale DSM 74		22	19
No Yes	Pedobacter heparinus DSM 2366		21	18
No Yes	Candidatus Sulcia muelleri GWSS		10	9
No Yes	Zunongwangia profunda SM-A87		23	20
No Yes	Gramella forsetii KT0803		23	20
No Yes	Robiginitalea biformata HTCC2501		22	19
No Yes	Flavobacteriaceae bacterium 3519-10		22	19
No Yes	Capnocytophaga ochracea DSM 7271		19	17
No Yes	Flavobacterium psychrophilum JIP02/86		21	18
No Yes	Flavobacterium johnsoniae UW101		23	20
No Yes	Blattabacterium sp. Bge		17	14
No Yes	Dictyoglomus turgidum DSM 6724		22	19
No Yes	Dictyoglomus thermophilum H-6-12		22	19
No Yes	Candidatus Protochlamydia amoebophila UWE25		16	14
No Yes	Chlamydophila pneumoniae TW-183		14	12
No Yes	Chlamydophila caviae GPIC		14	12
No Yes	Chlamydophila felis Fe/C-56		14	12
No Yes	Chlamydophila abortus S26/3		14	12
No Yes	Chlamydia muridarum Nigg		14	12
No Yes	Chlamydia trachomatis D/UW-3/CX		14	12
No Yes	Coraliomargarita akajimensis DSM 45221		20	17
No Yes	Opitutus terrae PB90-1		21	18
No Yes	Methylacidiphilum infernorum V4		16	13
No Yes	Akkermansia muciniphila ATCC BAA-835		18	15
No Yes	Thermodesulfovibrio yellowstonii DSM 11347		20	17
No Yes	Streptobacillus moniliformis DSM 12112		17	16
No Yes	Sebaldella termitidis ATCC 33386		20	17
No Yes	Leptotrichia buccalis DSM 1135		24	21
No Yes	Fusobacterium nucleatum ssp. nucleatum ATCC 25586		19	17
No Yes	Thermobaculum terrenum ATCC BAA-798		24	22
No Yes	Deinococcus deserti VCD115		19	17
No Yes	Deinococcus geothermalis DSM 11300		19	17
No Yes	Deinococcus radiodurans R1		19	17
No Yes	Meiothermus ruber DSM 1279		22	19
No Yes	Thermus thermophilus HB27 (First sequenced)		20	18
No Yes	Natranaerobius thermophilus JW/NM-WN-LF		22	20
No Yes	Symbiobacterium thermophilum IAM 14863		21	19
No Yes	Anaerococcus prevotii DSM 20548		15	14
No Yes	Finegoldia magna ATCC 29328		15	14
No Yes	Clostridiales genomosp. BVAB3 UPII9-5		17	16
No Yes	Anaerocellum thermophilum DSM 6725		20	18
No Yes	Candidatus Desulforudis audaxviator MP104C		19	17
No Yes	Pelotomaculum thermopropionicum SI		22	20
No Yes	Desulfitobacterium hafniense Y51		25	23
No Yes	Desulfotomaculum reducens MI-1		24	22
No Yes	Desulfotomaculum acetoxidans DSM 771		25	22
No Yes	Eubacterium rectale ATCC 33656		20	18
No Yes	Eubacterium eligens ATCC 27750		19	17
No Yes	Syntrophomonas wolfei ssp. wolfei Goettingen		23	21
No Yes	Heliobacterium modesticaldum Ice1		23	21
No Yes	Alkaliphilus oremlandii OhILAs		20	19
No Yes	Alkaliphilus metalliredigens QYMF		31	26
No Yes	Clostridium phytofermentans ISDg		20	18
No Yes	Clostridium novyi NT		22	20
No Yes	Clostridium kluyveri DSM 555		23	21
No Yes	Clostridium cellulolyticum H10		24	22
No Yes	Clostridium beijerinckii NCIMB 8052		26	24
No Yes	Clostridium thermocellum ATCC 27405		22	20
No Yes	Clostridium tetani E88		20	19
No Yes	Clostridium perfringens 13		22	21
No Yes	Clostridium difficile 630		22	20
No Yes	Clostridium botulinum A ATCC 3502		24	22
No Yes	Clostridium acetobutylicum ATCC 824		27	25
No Yes	Veillonella parvula DSM 2008		21	18
No Yes	Acidaminococcus fermentans DSM 20731		19	16
No Yes	Caldicellulosiruptor saccharolyticus DSM 8903		19	17
No Yes	Coprothermobacter proteolyticus DSM 5265		14	13
No Yes	Carboxydothermus hydrogenoformans Z-2901		21	19
No Yes	Moorella thermoacetica ATCC 39073		22	20
No Yes	Ammonifex degensii KC4		17	15
No Yes	Thermoanaerobacter pseudethanolicus ATCC 33223		20	18
No Yes	Thermoanaerobacter sp. X514		20	18
No Yes	Thermoanaerobacter tengcongensis MB4		20	18
No Yes	Thermoanaerobacter italicus Ab9		19	17
No Yes	Halothermothrix orenii H 168		27	24
No Yes	Enterococcus faecalis V583		20	19
No Yes	Oenococcus oeni PSU-1		13	13
No Yes	Leuconostoc citreum KM20		15	15
No Yes	Leuconostoc mesenteroides ssp. mesenteroides ATCC 8293		19	18
No Yes	Lactobacillus casei ATCC 334		18	17
No Yes	Lactobacillus crispatus ST1		16	16
No Yes	Lactobacillus rhamnosus GG		19	18
No Yes	Lactobacillus johnsonii NCC 533		15	15
No Yes	Lactobacillus salivarius UCC118		16	16
No Yes	Lactobacillus fermentum IFO 3956		19	18
No Yes	Lactobacillus sakei ssp. sakei 23K		16	16
No Yes	Lactobacillus reuteri DSM 20016		16	16
No Yes	Lactobacillus gasseri ATCC 33323		16	16
No Yes	Lactobacillus plantarum WCFS1		19	18
No Yes	Lactobacillus helveticus DPC 4571		15	15
No Yes	Lactobacillus delbrueckii ssp. bulgaricus ATCC 11842		14	14
No Yes	Lactobacillus brevis ATCC 367		17	17
No Yes	Lactobacillus acidophilus NCFM		16	16
No Yes	Pediococcus pentosaceus ATCC 25745		15	15
No Yes	Lactococcus lactis ssp. lactis Il1403		19	17
No Yes	Streptococcus gallolyticus UCN34		21	19
No Yes	Streptococcus equi ssp. zooepidemicus MGCS10565		18	17
No Yes	Streptococcus dysgalactiae ssp. equisimilis GGS_124		17	16
No Yes	Streptococcus mitis B6		18	17
No Yes	Streptococcus uberis 0140J		17	16
No Yes	Streptococcus pyogenes M1 GAS		15	14
No Yes	Streptococcus pneumoniae TIGR4 (Virulent)		16	15
No Yes	Streptococcus agalactiae NEM316		17	16
No Yes	Streptococcus mutans UA159		20	18
No Yes	Streptococcus thermophilus LMG 18311 (Older strain)		17	16
No Yes	Streptococcus suis 05ZYH33		18	17
No Yes	Streptococcus sanguinis SK36		21	19
No Yes	Streptococcus gordonii Challis subCH1		19	17
No Yes	Exiguobacterium sp. AT1b		18	16
No Yes	Exiguobacterium sibiricum 255-15		20	18
No Yes	Bacillus tusciae DSM 2912		18	16
No Yes	Alicyclobacillus acidocaldarius ssp. acidocaldarius DSM 446		18	16
No Yes	Brevibacillus brevis NBRC 100599		23	21
No Yes	Paenibacillus sp. JDR-2		28	26
No Yes	Listeria welshimeri ser. 6b SLCC5334		22	20
No Yes	Listeria innocua Clip11262		22	20
No Yes	Listeria seeligeri ser. 1/2b SLCC3954		22	20
No Yes	Listeria monocytogenes EGD-e		22	20
No Yes	Lysinibacillus sphaericus C3-41		19	17
No Yes	Oceanobacillus iheyensis HTE831		22	20
No Yes	Anoxybacillus flavithermus WK1		19	17
No Yes	Geobacillus sp. WCH70		23	21
No Yes	Geobacillus thermodenitrificans NG80-2		20	18
No Yes	Geobacillus kaustophilus HTA426		21	19
No Yes	Bacillus subtilis ssp. subtilis 168		21	19
No Yes	Bacillus licheniformis ATCC 14580		21	19
No Yes	Bacillus amyloliquefaciens FZB42		22	20
No Yes	Bacillus halodurans C-125		22	20
No Yes	Bacillus weihenstephanensis KBAB4		20	18
No Yes	Bacillus thuringiensis ser. konkukian 97-27		20	18
No Yes	Bacillus cereus ATCC 14579		20	18
No Yes	Bacillus anthracis Ames Ancestor		20	18
No Yes	Bacillus pseudofirmus OF4		20	18
No Yes	Bacillus clausii KSM-K16		22	20
No Yes	Bacillus pumilus SAFR-032		20	18
No Yes	Bacillus megaterium QM B1551		22	20
No Yes	Macrococcus caseolyticus JCSC5402		13	12
No Yes	Staphylococcus saprophyticus ssp. saprophyticus ATCC 15305		19	17
No Yes	Staphylococcus lugdunensis HKU09-01		16	15
No Yes	Staphylococcus haemolyticus JCSC1435		16	15
No Yes	Staphylococcus epidermidis RP62A		18	16
No Yes	Staphylococcus carnosus ssp. carnosus TM300		19	17
No Yes	Staphylococcus aureus ssp. aureus NCTC 8325		18	16
No Yes	Nautilia profundicola AmH		16	13
No Yes	Sulfurospirillum deleyianum DSM 6946		17	14
No Yes	Arcobacter butzleri RM4018		17	14
No Yes	Campylobacter hominis ATCC BAA-381		18	15
No Yes	Campylobacter lari RM2100		18	15
No Yes	Campylobacter curvus 525.92		17	14
No Yes	Campylobacter concisus 13826		17	14
No Yes	Campylobacter jejuni ssp. jejuni NCTC 11168		19	16
No Yes	Campylobacter fetus ssp. fetus 82-40		18	15
No Yes	Sulfurimonas denitrificans DSM 1251		17	14
No Yes	Wolinella succinogenes DSM 1740		17	14
No Yes	Helicobacter hepaticus ATCC 51449		18	15
No Yes	Helicobacter mustelae 12198		18	15
No Yes	Helicobacter acinonychis Sheeba		16	14
No Yes	Helicobacter pylori 26695		16	14
No Yes	Nitratiruptor sp. SB155-2		17	14
No Yes	Sulfurovum sp. NBC37-1		18	15
No Yes	Bdellovibrio bacteriovorus HD100		23	21
No Yes	Syntrophus aciditrophicus SB		22	19
No Yes	Syntrophobacter fumaroxidans MPOB		21	18
No Yes	Desulfotalea psychrophila LSv54		25	22
No Yes	Desulfatibacillum alkenivorans AK-01		24	21
No Yes	Desulfobacterium autotrophicum HRM2		28	25
No Yes	Desulfococcus oleovorans Hxd3		22	19
No Yes	Desulfohalobium retbaense DSM 5692		22	19
No Yes	Desulfomicrobium baculatum DSM 4028		25	22
No Yes	Lawsonia intracellularis PHE/MN1-00		18	16
No Yes	Desulfovibrio magneticus RS-1		21	19
No Yes	Desulfovibrio vulgaris Hildenborough		24	21
No Yes	Desulfovibrio salexigens DSM 2638		25	22
No Yes	Desulfovibrio desulfuricans ssp. desulfuricans G20		24	21
No Yes	Pelobacter propionicus DSM 2379		24	21
No Yes	Pelobacter carbinolicus DSM 2380		24	21
No Yes	Geobacter uraniireducens Rf4		25	21
No Yes	Geobacter sp. FRC-32		26	22
No Yes	Geobacter lovleyi SZ		22	19
No Yes	Geobacter bemidjiensis Bem		24	21
No Yes	Geobacter sulfurreducens PCA		23	20
No Yes	Geobacter metallireducens GS-15		22	19
No Yes	Haliangium ochraceum DSM 14365		25	23
No Yes	Sorangium cellulosum So ce 56		28	26
No Yes	Anaeromyxobacter sp. Fw109-5		23	20
No Yes	Anaeromyxobacter dehalogenans 2CP-C		23	20
No Yes	Myxococcus xanthus DK 1622		27	24
No Yes	Magnetococcus sp. MC-1		22	19
No Yes	Sideroxydans lithotrophicus ES-1		21	18
No Yes	Aromatoleum aromaticum EbN1		22	19
No Yes	Dechloromonas aromatica RCB		21	18
No Yes	Thauera sp. MZ1T		24	21
No Yes	Laribacter hongkongensis HLHK9		19	16
No Yes	Chromobacterium violaceum ATCC 12472		20	17
No Yes	Neisseria meningitidis Z2491		19	16
No Yes	Neisseria gonorrhoeae FA 1090		18	15
No Yes	Methylotenera mobilis JLW8		25	22
No Yes	Methylovorus sp. SIP3-4		25	22
No Yes	Methylobacillus flagellatus KT		26	23
No Yes	Thiobacillus denitrificans ATCC 25259		20	17
No Yes	Candidatus Accumulibacter phosphatis clade IIA UW-1		21	18
No Yes	Methylibium petroleiphilum PM1		24	21
No Yes	Leptothrix cholodnii SP-6		24	21
No Yes	Ralstonia eutropha JMP134		23	20
No Yes	Cupriavidus taiwanensis		22	19
No Yes	Ralstonia metallidurans CH34		21	18
No Yes	Ralstonia pickettii 12J		23	19
No Yes	Ralstonia solanacearum GMI1000		20	17
No Yes	Polynucleobacter necessarius ssp. asymbioticus QLW-P1DMWA-1		16	13
No Yes	Burkholderia phytofirmans PsJN		23	20
No Yes	Burkholderia phymatum STM815		23	20
No Yes	Burkholderia thailandensis E264		25	21
No Yes	Burkholderia pseudomallei K96243		26	22
No Yes	Burkholderia mallei ATCC 23344		25	21
No Yes	Burkholderia sp. 383		24	20
No Yes	Burkholderia ambifaria AMMD		21	18
No Yes	Burkholderia cenocepacia AU 1054		23	19
No Yes	Burkholderia multivorans ATCC 17616		21	18
No Yes	Burkholderia vietnamiensis G4		23	20
No Yes	Burkholderia xenovorans LB400		23	20
No Yes	Burkholderia glumae BGR1		23	19
No Yes	Verminephrobacter eiseniae EF01-2		20	17
No Yes	Delftia acidovorans SPH-1		20	17
No Yes	Polaromonas sp. JS666		21	18
No Yes	Polaromonas naphthalenivorans CJ2		20	17
No Yes	Variovorax paradoxus S110		24	21
No Yes	Rhodoferax ferrireducens T118		22	19
No Yes	Diaphorobacter sp. TPSY		22	19
No Yes	Acidovorax sp. JS42		21	18
No Yes	Acidovorax citrulli AAC00-1		20	17
No Yes	Comamonas sp. CNB-1		20	17
No Yes	Herminiimonas arsenicoxydans		20	17
No Yes	Janthinobacterium sp. Marseille		20	17
No Yes	Bordetella petrii DSM 12804		22	19
No Yes	Bordetella avium 197N		22	19
No Yes	Bordetella pertussis Tohama I		20	17
No Yes	Bordetella parapertussis 12822		22	19
No Yes	Bordetella bronchiseptica RB50		22	19
No Yes	Nitrosospira multiformis ATCC 25196		18	16
No Yes	Nitrosomonas eutropha C91		19	17
No Yes	Nitrosomonas europaea ATCC 19718		18	16
No Yes	Caulobacter sp. K31		19	16
No Yes	Caulobacter crescentus CB15		18	15
No Yes	Caulobacter segnis ATCC 21756		19	16
No Yes	Phenylobacterium zucineum HLK1		19	16
No Yes	Erythrobacter litoralis HTCC2594		17	15
No Yes	Sphingopyxis alaskensis RB2256		16	14
No Yes	Novosphingobium aromaticivorans DSM 12444		18	16
No Yes	Sphingobium japonicum UT26S		17	15
No Yes	Sphingomonas wittichii RW1		17	15
No Yes	Zymomonas mobilis ssp. mobilis ZM4		16	14
No Yes	Maricaulis maris MCS10		19	16
No Yes	Hirschia baltica ATCC 49814		18	15
No Yes	Hyphomonas neptunium ATCC 15444		17	14
No Yes	Dinoroseobacter shibae DFL 12		18	15
No Yes	Jannaschia sp. CCS1		19	16
No Yes	Ruegeria sp. TM1040		18	15
No Yes	Ruegeria pomeroyi DSS-3		20	17
No Yes	Roseobacter denitrificans OCh 114		20	17
No Yes	Rhodobacter sphaeroides 2.4.1		19	16
No Yes	Rhodobacter capsulatus SB1003		20	17
No Yes	Paracoccus denitrificans PD1222		19	16
No Yes	Magnetospirillum magneticum AMB-1		23	20
No Yes	Rhodospirillum centenum SW		21	18
No Yes	Rhodospirillum rubrum ATCC 11170		21	18
No Yes	Azospirillum sp. B510		19	16
No Yes	Granulibacter bethesdensis CGDNIH1		22	19
No Yes	Gluconacetobacter diazotrophicus PAl 5		20	17
No Yes	Gluconobacter oxydans 621H		20	17
No Yes	Acetobacter pasteurianus IFO 3283-01		20	17
No Yes	alpha proteobacterium IMCC1322		20	17
No Yes	Candidatus Pelagibacter ubique HTCC1062		13	10
No Yes	Neorickettsia sennetsu Miyayama		12	11
No Yes	Neorickettsia risticii Illinois		11	11
No Yes	Ehrlichia chaffeensis Arkansas		13	12
No Yes	Ehrlichia canis Jake		13	12
No Yes	Ehrlichia ruminantium Welgevonden		13	12
No Yes	Anaplasma phagocytophilum HZ		12	11
No Yes	Anaplasma marginale St. Maries		13	12
No Yes	Anaplasma centrale Israel		13	12
No Yes	Orientia tsutsugamushi Boryong		12	11
No Yes	Rickettsia bellii RML369-C		16	14
No Yes	Rickettsia canadensis McKiel		15	13
No Yes	Rickettsia typhi Wilmington		15	13
No Yes	Rickettsia prowazekii Madrid E		15	13
No Yes	Rickettsia peacockii Rustic		15	13
No Yes	Rickettsia felis URRWXCal2		16	14
No Yes	Rickettsia massiliae MTU5		15	13
No Yes	Rickettsia africae ESF-5		15	13
No Yes	Rickettsia akari Hartford		15	13
No Yes	Rickettsia rickettsii Sheila Smith		15	13
No Yes	Rickettsia conorii Malish 7		16	14
No Yes	Wolbachia endosymbiont of Culex_quinquefasciatus Pel		13	12
No Yes	Wolbachia endosymbiont of Drosophila melanogaster (Genus only)		13	12
No Yes	Wolbachia endosymbiont TRS of Brugia malayi		11	10
No Yes	Wolbachia sp. wRi		12	11
No Yes	Xanthobacter autotrophicus Py2		22	19
No Yes	Azorhizobium caulinodans ORS 571		20	17
No Yes	Methylobacterium chloromethanicum CM4		24	21
No Yes	Methylobacterium extorquens PA1		24	21
No Yes	Methylobacterium sp. 4-46		25	21
No Yes	Methylobacterium populi BJ001		24	21
No Yes	Methylobacterium nodulans ORS 2060		24	21
No Yes	Methylobacterium radiotolerans JCM 2831		26	22
No Yes	Candidatus Hodgkinia cicadicola Dsem		5	4
No Yes	Ochrobactrum anthropi ATCC 49188		20	17
No Yes	Brucella microti CCM 4915		18	15
No Yes	Brucella canis ATCC 23365		19	16
No Yes	Brucella suis 1330		19	16
No Yes	Brucella melitensis bv. 1 16M		19	16
No Yes	Brucella ovis ATCC 25840		19	16
No Yes	Brucella abortus bv. 1 9-941		18	15
No Yes	Sinorhizobium medicae WSM419		19	16
No Yes	Sinorhizobium meliloti 1021		19	16
No Yes	Rhizobium etli CFN 42		19	16
No Yes	Rhizobium sp. NGR234		19	16
No Yes	Rhizobium leguminosarum bv. viciae 3841		19	16
No Yes	Agrobacterium vitis S4		20	17
No Yes	Agrobacterium radiobacter K84		19	16
No Yes	Agrobacterium tumefaciens C58		20	17
No Yes	Candidatus Liberibacter asiaticus psy62		18	16
No Yes	Chelativorans sp. BNC1		19	16
No Yes	Parvibaculum lavamentivorans DS-1		20	17
No Yes	Mesorhizobium loti MAFF303099		20	17
No Yes	Methylocella silvestris BL2		22	20
No Yes	Beijerinckia indica ssp. indica ATCC 9039		18	16
No Yes	Oligotropha carboxidovorans OM5		18	15
No Yes	Rhodopseudomonas palustris CGA009		20	17
No Yes	Nitrobacter winogradskyi Nb-255		20	17
No Yes	Nitrobacter hamburgensis X14		20	17
No Yes	Bradyrhizobium sp. ORS278		21	18
No Yes	Bradyrhizobium japonicum USDA 110		22	19
No Yes	Bartonella tribocorum CIP 105476		15	13
No Yes	Bartonella henselae Houston-1		15	13
No Yes	Bartonella grahamii as4aup		15	13
No Yes	Bartonella quintana Toulouse		15	13
No Yes	Bartonella bacilliformis KC583		16	14
No Yes	Acidithiobacillus ferrooxidans ATCC 23270		19	16
No Yes	Mannheimia succiniciproducens MBEL55E		23	20
No Yes	Aggregatibacter aphrophilus NJ8700		21	18
No Yes	Aggregatibacter actinomycetemcomitans D11S-1		21	19
No Yes	Haemophilus somnus 129PT		20	18
No Yes	Pasteurella multocida ssp. multocida Pm70		23	20
No Yes	Haemophilus parasuis SH0165		21	19
No Yes	Haemophilus ducreyi 35000HP		16	14
No Yes	Haemophilus influenzae Rd KW20		23	20
No Yes	Actinobacillus succinogenes 130Z		23	20
No Yes	Actinobacillus pleuropneumoniae L20		23	20
No Yes	Tolumonas auensis DSM 9187		25	22
No Yes	Aeromonas salmonicida ssp. salmonicida A449		24	21
No Yes	Aeromonas hydrophila ssp. hydrophila ATCC 7966		23	20
No Yes	Aliivibrio salmonicida LFI1238		24	21
No Yes	Vibrio fischeri ES114		25	22
No Yes	Vibrio parahaemolyticus RIMD 2210633		26	23
No Yes	Vibrio harveyi ATCC BAA-1116		25	22
No Yes	Vibrio sp. Ex25		26	23
No Yes	Vibrio splendidus LGP32		24	21
No Yes	Vibrio vulnificus YJ016 (Good annotation)		26	23
No Yes	Vibrio cholerae O1 biov. El Tor N16961		25	22
No Yes	Photobacterium profundum SS9		25	22
No Yes	Psychromonas ingrahamii 37		24	21
No Yes	Idiomarina loihiensis L2TR		21	18
No Yes	Shewanella piezotolerans WP3		26	23
No Yes	Shewanella loihica PV-4		27	24
No Yes	Shewanella halifaxensis HAW-EB4		26	23
No Yes	Shewanella sediminis HAW-EB3		26	23
No Yes	Shewanella denitrificans OS217		25	22
No Yes	Shewanella pealeana ATCC 700345		26	23
No Yes	Shewanella oneidensis MR-1		25	22
No Yes	Shewanella baltica OS155		24	21
No Yes	Shewanella woodyi ATCC 51908		27	24
No Yes	Shewanella sp. MR-7		25	22
No Yes	Shewanella amazonensis SB2B		26	23
No Yes	Shewanella violacea DSS12		26	23
No Yes	Shewanella frigidimarina NCIMB 400		25	22
No Yes	Shewanella putrefaciens CN-32		25	22
No Yes	Colwellia psychrerythraea 34H		23	20
No Yes	Pseudoalteromonas atlantica T6c		24	21
No Yes	Pseudoalteromonas haloplanktis TAC125		24	21
No Yes	Teredinibacter turnerae T7901		23	20
No Yes	Saccharophagus degradans 2-40		24	21
No Yes	Marinobacter aquaeolei VT8		22	19
No Yes	Alteromonas macleodii Deep ecotype		21	19
No Yes	Hahella chejuensis KCTC 2396		27	24
No Yes	Alcanivorax borkumensis SK2		21	18
No Yes	Marinomonas sp. MWYL1		23	20
No Yes	Chromohalobacter salexigens DSM 3043		21	18
No Yes	Methylococcus capsulatus Bath		27	24
No Yes	Dichelobacter nodosus VCS1703A		19	17
No Yes	Stenotrophomonas maltophilia R551-3		23	20
No Yes	Xylella fastidiosa 9a5c		20	17
No Yes	Xanthomonas axonopodis pv. citri 306		22	19
No Yes	Xanthomonas albilineans		21	18
No Yes	Xanthomonas oryzae pv. oryzae KACC10331		22	19
No Yes	Xanthomonas campestris pv. campestris ATCC 33913 (Completed 2001)		22	19
No Yes	Halothiobacillus neapolitanus c2		18	15
No Yes	Alkalilimnicola ehrlichii MLHE-1		21	18
No Yes	Thioalkalivibrio sp. HL-EbGR7		20	17
No Yes	Halorhodospira halophila SL1		20	17
No Yes	Allochromatium vinosum DSM 180		22	19
No Yes	Nitrosococcus halophilus Nc4		26	23
No Yes	Nitrosococcus oceani ATCC 19707		21	18
No Yes	Coxiella burnetii RSA 493		18	16
No Yes	Legionella longbeachae NSW150		23	20
No Yes	Legionella pneumophila ssp. pneumophila Philadelphia 1		21	18
No Yes	Kangiella koreensis DSM 16069		20	17
No Yes	Baumannia cicadellinicola Hc		14	12
No Yes	Candidatus Carsonella ruddii PV		3	3
No Yes	Candidatus Vesicomyosocius okutanii HA		15	12
No Yes	Candidatus Ruthia magnifica Cm		15	12
No Yes	Cronobacter turicensis z3032		24	21
No Yes	Cronobacter sakazakii ATCC BAA-894		24	21
No Yes	Candidatus Riesia pediculicola USDA		10	9
No Yes	Dickeya zeae Ech1591		23	20
No Yes	Dickeya dadantii Ech703		23	20
No Yes	Candidatus Hamiltonella defensa 5AT		20	18
No Yes	Candidatus Blochmannia floridanus		14	11
No Yes	Pectobacterium wasabiae WPP163		22	19
No Yes	Pectobacterium atrosepticum SCRI1043		23	20
No Yes	Pectobacterium carotovorum ssp. carotovorum PC1		22	19
No Yes	Sodalis glossinidius morsitans		22	19
No Yes	Pantoea ananatis LMG 20103		23	20
No Yes	Wigglesworthia glossinidia		11	9
No Yes	Buchnera aphidicola APS		14	12
No Yes	Photorhabdus asymbiotica		24	21
No Yes	Photorhabdus luminescens ssp. laumondii TTO1		25	22
No Yes	Edwardsiella ictaluri 93-146		24	21
No Yes	Edwardsiella tarda EIB202		23	20
No Yes	Yersinia pseudotuberculosis IP 32953		24	21
No Yes	Yersinia pestis CO92		23	20
No Yes	Yersinia enterocolitica ssp. enterocolitica 8081		25	22
No Yes	Xenorhabdus bovienii SS-2004		23	20
No Yes	Shigella sonnei Ss046		22	19
No Yes	Shigella flexneri 2a 2457T		22	19
No Yes	Shigella dysenteriae Sd197		21	18
No Yes	Shigella boydii Sb227		23	20
No Yes	Serratia proteamaculans 568		25	22
No Yes	Salmonella enterica ssp. enterica ser. Typhimurium LT2		25	22
No Yes	Proteus mirabilis HI4320		23	20
No Yes	Klebsiella variicola At-22		24	21
No Yes	Klebsiella pneumoniae ssp. pneumoniae MGH 78578		24	21
No Yes	Escherichia fergusonii ATCC 35469		24	21
No Yes	Escherichia coli K-12 subMG1655		23	20
No Yes	Erwinia tasmaniensis Et1/99		23	20
No Yes	Erwinia pyrifoliae Ep1/96		24	21
No Yes	Erwinia amylovora ATCC 49946		23	20
No Yes	Enterobacter sp. 638		24	21
No Yes	Citrobacter rodentium ICC168		23	20
No Yes	Citrobacter koseri ATCC BAA-895		24	21
No Yes	Azotobacter vinelandii DJ		21	18
No Yes	Pseudomonas entomophila L48		24	21
No Yes	Pseudomonas syringae pv. tomato DC3000		21	18
No Yes	Pseudomonas stutzeri A1501		22	19
No Yes	Pseudomonas putida KT2440		23	20
No Yes	Pseudomonas fluorescens Pf-5		21	18
No Yes	Pseudomonas mendocina ymp		22	19
No Yes	Pseudomonas aeruginosa PAO1		24	21
No Yes	Cellvibrio japonicus Ueda107		21	18
No Yes	Psychrobacter sp. PRwf-1		21	18
No Yes	Psychrobacter arcticus 273-4		21	18
No Yes	Psychrobacter cryohalolentis K5		21	18
No Yes	Acinetobacter sp. ADP1		21	18
No Yes	Acinetobacter baumannii ATCC 17978		19	16
No Yes	Thiomicrospira crunogena XCL-2		23	20
No Yes	Francisella philomiragia ssp. philomiragia ATCC 25017		24	20
No Yes	Francisella tularensis ssp. tularensis SCHU S4		18	16
No Yes	Gloeobacter violaceus PCC 7421		18	15
No Yes	Acaryochloris marina MBIC11017		18	16
No Yes	Prochlorococcus marinus MIT 9313		17	14
No Yes	Nostoc punctiforme PCC 73102		21	18
No Yes	Nostoc sp. PCC 7120		18	15
No Yes	Anabaena variabilis ATCC 29413		19	16
No Yes	Trichodesmium erythraeum IMS101		21	18
No Yes	Thermosynechococcus elongatus BP-1		19	16
No Yes	cyanobacterium UCYN-A		16	14
No Yes	Cyanothece sp. ATCC 51142		21	18
No Yes	Synechocystis sp. PCC 6803		20	17
No Yes	Synechococcus elongatus PCC 6301		19	16
No Yes	Microcystis aeruginosa NIES-843		19	16
No Yes	Nitrosopumilus maritimus SCM1		12	11
No Yes	Nanoarchaeum equitans Kin4-M		10	10
No Yes	Candidatus Korarchaeum cryptofilum OPF8		10	10
No Yes	Methanocella paludicola SANAE		18	17
No Yes	Methanosaeta thermophila PT		17	15
No Yes	Methanococcoides burtonii DSM 6242		18	17
No Yes	Methanosarcina acetivorans C2A		21	20
No Yes	Methanosarcina mazei Go1		21	20
No Yes	Methanosarcina barkeri Fusaro		21	20
No Yes	Methanohalophilus mahii DSM 5219		17	16
No Yes	Methanosphaerula palustris E1-9c		16	15
No Yes	Candidatus Methanoregula boonei 6A8		14	13
No Yes	Methanospirillum hungatei JF-1		17	16
No Yes	Methanocorpusculum labreanum Z		15	14
No Yes	Methanoculleus marisnigri JR1		19	18
No Yes	Methanopyrus kandleri AV19		14	13
No Yes	Ferroglobus placidus DSM 10642		16	15
No Yes	Archaeoglobus profundus DSM 5631		16	15
No Yes	Archaeoglobus fulgidus DSM 4304		16	15
No Yes	Thermococcus onnurineus NA1		16	15
No Yes	Thermococcus kodakarensis KOD1		18	17
No Yes	Thermococcus gammatolerans EJ3		15	14
No Yes	Thermococcus sibiricus MM 739		14	14
No Yes	Pyrococcus horikoshii OT3		14	14
No Yes	Pyrococcus abyssi GE5		14	14
No Yes	Pyrococcus furiosus DSM 3638		16	15
No Yes	Thermoplasma volcanium GSS1		14	14
No Yes	Thermoplasma acidophilum DSM 1728		14	14
No Yes	Picrophilus torridus DSM 9790		14	13
No Yes	Haloquadratum walsbyi DSM 16790		18	17
No Yes	Halomicrobium mukohataei DSM 12286		16	15
No Yes	Halorhabdus utahensis DSM 12940		18	17
No Yes	Haloterrigena turkmenica DSM 5511		15	14
No Yes	Natronomonas pharaonis DSM 2160		16	15
No Yes	Natrialba magadii ATCC 43099		16	15
No Yes	Halorubrum lacusprofundi ATCC 49239		17	16
No Yes	Haloferax volcanii DS2		18	17
No Yes	Halobacterium salinarum R1		15	14
No Yes	Halobacterium sp. NRC-1		15	14
No Yes	Haloarcula marismortui ATCC 43049		15	14
No Yes	Methanocaldococcus sp. FS406-22		14	13
No Yes	Methanocaldococcus fervens AG86		13	12
No Yes	Methanocaldococcus vulcanius M7		13	12
No Yes	Methanocaldococcus jannaschii DSM 2661		13	12
No Yes	Methanococcus aeolicus Nankai-3		15	14
No Yes	Methanococcus maripaludis S2		14	13
No Yes	Methanococcus vannielii SB		14	13
No Yes	Methanothermobacter thermautotrophicus Delta H		14	13
No Yes	Methanosphaera stadtmanae DSM 3091		16	15
No Yes	Methanobrevibacter ruminantium M1		16	15
No Yes	Methanobrevibacter smithii ATCC 35061		16	15
No Yes	uncultured methanogenic archaeon RC-I		19	18
No Yes	Aciduliprofundum boonei T469		14	14
No Yes	Hyperthermus butylicus DSM 5456		11	11
No Yes	Aeropyrum pernix K1		12	12
No Yes	Ignicoccus hospitalis KIN4/I		14	13
No Yes	Staphylothermus marinus F1		10	10
No Yes	Desulfurococcus kamchatkensis 1221n		11	11
No Yes	Metallosphaera sedula DSM 5348		14	13
No Yes	Sulfolobus tokodaii 7		14	13
No Yes	Sulfolobus islandicus Y.N.15.51		14	13
No Yes	Sulfolobus solfataricus P2		14	13
No Yes	Sulfolobus acidocaldarius DSM 639		14	13
No Yes	Thermofilum pendens Hrk 5		10	10
No Yes	Caldivirga maquilingensis IC-167		14	13
No Yes	Pyrobaculum calidifontis JCM 11548		13	12
No Yes	Pyrobaculum arsenaticum DSM 13514		13	12
No Yes	Pyrobaculum aerophilum IM2		13	12
No Yes	Pyrobaculum islandicum DSM 4184		12	11
No Yes	Thermoproteus neutrophilus V24Sta		13	12
No Yes	Drosophila melanogaster FlyBase 5.12 (all transcripts) (FlyBase)	Fruit fly	36	33
No Yes	Caenorhabditis elegans WormBase WS194 (all transcripts) (WormBase)	Nematode	49	48
No Yes	Cryptococcus neoformans var. grubii H99		31	30
No Yes	Cryptococcus neoformans B-3501A		32	31
No Yes	Ajellomyces dermatitidis ER-3		28	27
No Yes	Histoplasma capsulatum H143		27	25
No Yes	Histoplasma capsulatum H88		29	28
No Yes	Histoplasma capsulatum G186AR		29	28
No Yes	Paracoccidioides brasiliensis Pb01		29	28
No Yes	Paracoccidioides brasiliensis Pb03		28	27
No Yes	Coccidioides posadasii str. Silveira		28	27
No Yes	Coccidioides immitis RMSCC 3703		26	25
No Yes	Coccidioides immitis RMSCC 2394		29	28
No Yes	Coccidioides immitis H538.4		29	28
No Yes	Aspergillus fumigatus A1163		29	28
No Yes	Candida albicans WO-1		23	22
No Yes	Saccharomyces cerevisiae YJM789		31	30
No Yes	Saccharomyces cerevisiae RM11-1a		30	30
No Yes	Saccharomyces cerevisiae Ensembl 49_1h (all transcripts)	Baker's yeast	33	32
No Yes	Schizosaccharomyces pombe 972h-		30	29
No Yes	Batrachochytrium dendrobatidis JAM81		32	30
No Yes	Oryza sativa ssp. Indica (Subspecies)	Indian rice	76	72
No Yes	Plasmodium falciparum HB3		22	22
No Yes	Plasmodium falciparum Dd2		23	23
No Yes	Candidatus Phytoplasma australiense		8	7
No Yes	Ureaplasma parvum ser. 3 ATCC 27815		9	9
No Yes	Mycoplasma agalactiae		8	8
No Yes	Mycoplasma hyopneumoniae 7448		8	8
No Yes	Mycoplasma hyopneumoniae J		8	8
No Yes	Leptospira borgpetersenii ser. Hardjo-bovis JB197		19	16
No Yes	Leptospira interrogans ser. Copenhageni Fiocruz L1-130		21	18
No Yes	Leptospira biflexa ser. Patoc Patoc 1 (Ames)		19	16
No Yes	Treponema pallidum ssp. pallidum SS14		14	13
No Yes	Borrelia burgdorferi ZS7		18	17
No Yes	Bifidobacterium longum ssp. infantis ATCC 15697		20	18
No Yes	Bifidobacterium longum		20	18
No Yes	Bifidobacterium animalis ssp. lactis Bl-04		20	18
No Yes	Bifidobacterium animalis ssp. lactis DSM 10140		20	18
No Yes	Frankia sp. EAN1pec		20	18
No Yes	Propionibacterium acnes SK137		19	17
No Yes	Mycobacterium sp. KMS		18	16
No Yes	Mycobacterium sp. JLS		18	16
No Yes	Mycobacterium avium 104		19	17
No Yes	Mycobacterium tuberculosis KZN 1435		19	17
No Yes	Mycobacterium tuberculosis H37Ra		19	17
No Yes	Mycobacterium tuberculosis F11		19	17
No Yes	Mycobacterium tuberculosis CDC1551		19	17
No Yes	Mycobacterium bovis BCG Tokyo 172		19	17
No Yes	Mycobacterium bovis BCG Pasteur 1173P2		21	19
No Yes	Mycobacterium leprae Br4923		14	12
No Yes	Corynebacterium glutamicum R		18	16
No Yes	Corynebacterium glutamicum ATCC 13032 Bielefeld		18	16
No Yes	Tropheryma whipplei TW08/27		13	12
No Yes	Clavibacter michiganensis ssp. sepedonicus		17	15
No Yes	Dehalococcoides sp. GT		16	14
No Yes	Dehalococcoides sp. VS		16	14
No Yes	Dehalococcoides sp. BAV1		16	14
No Yes	Chlorobium phaeobacteroides BS1		18	15
No Yes	Porphyromonas gingivalis ATCC 33277		19	17
No Yes	Bacteroides fragilis YCH46		24	21
No Yes	Salinibacter ruber		18	16
No Yes	Candidatus Sulcia muelleri DMIN		10	9
No Yes	Candidiatus Sulcia muelleri SMDSEM		10	9
No Yes	Blattabacterium sp. BPLAN		17	14
No Yes	Chlamydophila pneumoniae J138		14	12
No Yes	Chlamydophila pneumoniae CWL029		13	11
No Yes	Chlamydophila pneumoniae AR39		13	11
No Yes	Chlamydia trachomatis B/TZ1A828/OT		14	12
No Yes	Chlamydia trachomatis B/Jali20/OT		14	12
No Yes	Chlamydia trachomatis L2b/UCH-1/proctitis		14	12
No Yes	Chlamydia trachomatis 434/Bu		14	12
No Yes	Chlamydia trachomatis A/HAR-13		14	12
No Yes	Thermus thermophilus HB8		20	18
No Yes	Desulfitobacterium hafniense DCB-2		24	22
No Yes	Clostridium kluyveri NBRC 12016		23	21
No Yes	Clostridium perfringens SM101		22	21
No Yes	Clostridium perfringens ATCC 13124		22	21
No Yes	Clostridium difficile R20291		20	18
No Yes	Clostridium difficile CD196		21	19
No Yes	Clostridium botulinum F Langeland		24	22
No Yes	Clostridium botulinum E3 Alaska E43		23	21
No Yes	Clostridium botulinum B1 Okra		24	22
No Yes	Clostridium botulinum Ba4 657		23	21
No Yes	Clostridium botulinum B Eklund 17B		21	20
No Yes	Clostridium botulinum A2 Kyoto		24	22
No Yes	Clostridium botulinum A3 Loch Maree		22	21
No Yes	Clostridium botulinum A Hall		24	22
No Yes	Clostridium botulinum A ATCC 19397		24	22
No Yes	Lactobacillus casei BL23		18	17
No Yes	Lactobacillus rhamnosus Lc 705		18	17
No Yes	Lactobacillus johnsonii FI9785		15	15
No Yes	Lactobacillus reuteri JCM 1112		16	16
No Yes	Lactobacillus plantarum JDM1		19	18
No Yes	Lactobacillus delbrueckii ssp. bulgaricus ATCC BAA-365		14	14
No Yes	Lactococcus lactis ssp. lactis KF147		21	19
No Yes	Lactococcus lactis ssp. cremoris MG1363		20	18
No Yes	Lactococcus lactis ssp. cremoris SK11		18	16
No Yes	Streptococcus equi ssp. equi 4047		18	17
No Yes	Streptococcus equi ssp. zooepidemicus		18	17
No Yes	Streptococcus pyogenes MGAS10750		16	15
No Yes	Streptococcus pyogenes MGAS10270		16	15
No Yes	Streptococcus pyogenes MGAS2096		17	16
No Yes	Streptococcus pyogenes MGAS9429		16	15
No Yes	Streptococcus pyogenes MGAS6180		16	15
No Yes	Streptococcus pyogenes NZ131		16	15
No Yes	Streptococcus pyogenes MGAS8232		15	14
No Yes	Streptococcus pyogenes MGAS10394		16	15
No Yes	Streptococcus pyogenes Manfredo		15	14
No Yes	Streptococcus pyogenes MGAS315		15	14
No Yes	Streptococcus pyogenes SSI-1		15	14
No Yes	Streptococcus pyogenes MGAS5005		16	15
No Yes	Streptococcus pneumoniae ATCC 700669		18	17
No Yes	Streptococcus pneumoniae CGSP14		18	17
No Yes	Streptococcus pneumoniae G54		18	17
No Yes	Streptococcus pneumoniae P1031		16	16
No Yes	Streptococcus pneumoniae JJA		17	16
No Yes	Streptococcus pneumoniae 70585		16	15
No Yes	Streptococcus pneumoniae Hungary19A-6		18	17
No Yes	Streptococcus pneumoniae Taiwan19F-14		18	17
No Yes	Streptococcus pneumoniae D39		17	16
No Yes	Streptococcus pneumoniae R6 (Non-virulent)		17	16
No Yes	Streptococcus agalactiae A909		17	16
No Yes	Streptococcus agalactiae 2603V/R		18	17
No Yes	Streptococcus mutans NN2025		20	18
No Yes	Streptococcus thermophilus LMD-9		19	17
No Yes	Streptococcus thermophilus CNRZ1066 (Younger strain)		17	16
No Yes	Streptococcus suis BM407		20	19
No Yes	Streptococcus suis SC84		18	17
No Yes	Streptococcus suis 98HAH33		18	17
No Yes	Streptococcus suis P1/7		17	16
No Yes	Listeria monocytogenes 08-5578		22	20
No Yes	Listeria monocytogenes 08-5923		22	20
No Yes	Listeria monocytogenes Clip80459		22	20
No Yes	Listeria monocytogenes HCC23		22	20
No Yes	Listeria monocytogenes 4b F2365		22	20
No Yes	Geobacillus sp. Y412MC61		20	18
No Yes	Geobacillus sp. Y412MC10		24	22
No Yes	Bacillus licheniformis ATCC 14580		21	19
No Yes	Bacillus cytotoxicus NVH 391-98		19	17
No Yes	Bacillus thuringiensis Al Hakam		20	18
No Yes	Bacillus cereus 03BB102		20	18
No Yes	Bacillus cereus AH820		20	18
No Yes	Bacillus cereus AH187		20	18
No Yes	Bacillus cereus B4264		20	18
No Yes	Bacillus cereus G9842		20	18
No Yes	Bacillus cereus Q1		20	18
No Yes	Bacillus cereus E33L		20	18
No Yes	Bacillus cereus ATCC 10987		20	18
No Yes	Bacillus anthracis A0248		20	18
No Yes	Bacillus anthracis CDC 684		20	18
No Yes	Bacillus anthracis Sterne		20	18
No Yes	Bacillus anthracis Ames		20	18
No Yes	Bacillus megaterium DSM319		22	20
No Yes	Staphylococcus epidermidis ATCC 12228		18	16
No Yes	Staphylococcus aureus RF122		17	15
No Yes	Staphylococcus aureus ssp. aureus ED98		18	16
No Yes	Staphylococcus aureus ssp. aureus Newman		18	16
No Yes	Staphylococcus aureus ssp. aureus Mu3		19	17
No Yes	Staphylococcus aureus ssp. aureus USA300_TCH1516		16	14
No Yes	Staphylococcus aureus ssp. aureus USA300_FPR3757		18	16
No Yes	Staphylococcus aureus ssp. aureus JH1		18	16
No Yes	Staphylococcus aureus ssp. aureus JH9		17	15
No Yes	Staphylococcus aureus ssp. aureus MSSA476		18	16
No Yes	Staphylococcus aureus ssp. aureus MRSA252		18	16
No Yes	Staphylococcus aureus ssp. aureus MW2		18	16
No Yes	Staphylococcus aureus ssp. aureus N315		18	16
No Yes	Staphylococcus aureus ssp. aureus Mu50		19	17
No Yes	Staphylococcus aureus ssp. aureus COL		18	16
No Yes	Campylobacter jejuni RM1221		19	16
No Yes	Campylobacter jejuni ssp. jejuni 81116		18	15
No Yes	Campylobacter jejuni ssp. jejuni 81-176		19	16
No Yes	Campylobacter jejuni ssp. doylei 269.97		20	17
No Yes	Helicobacter pylori B38		16	14
No Yes	Helicobacter pylori P12		16	14
No Yes	Helicobacter pylori G27		15	13
No Yes	Helicobacter pylori Shi470		16	14
No Yes	Helicobacter pylori HPAG1		16	14
No Yes	Helicobacter pylori J99		16	14
No Yes	Desulfovibrio vulgaris DP4		24	21
No Yes	Desulfovibrio vulgaris Miyazaki F		24	21
No Yes	Desulfovibrio desulfuricans ssp. desulfuricans ATCC 27774		20	18
No Yes	Geobacter sp. M21		25	22
No Yes	Anaeromyxobacter sp. K		22	19
No Yes	Anaeromyxobacter dehalogenans 2CP-1		21	18
No Yes	Azoarcus sp. BH72		21	18
No Yes	Neisseria meningitidis alpha14		19	16
No Yes	Neisseria meningitidis 053442		19	16
No Yes	Neisseria meningitidis FAM18		19	16
No Yes	Neisseria meningitidis MC58		19	16
No Yes	Neisseria gonorrhoeae NCCP11945		18	15
No Yes	Ralstonia eutropha H16		22	19
No Yes	Ralstonia pickettii 12D		20	17
No Yes	Polynucleobacter necessarius ssp. necessarius STIR1		15	12
No Yes	Burkholderia sp. CCGE1002		23	20
No Yes	Burkholderia pseudomallei MSHR346		25	21
No Yes	Burkholderia pseudomallei 1106a		26	22
No Yes	Burkholderia pseudomallei 668		26	22
No Yes	Burkholderia pseudomallei 1710b		26	22
No Yes	Burkholderia mallei NCTC 10229		24	20
No Yes	Burkholderia mallei NCTC 10247		25	21
No Yes	Burkholderia mallei SAVP1		24	20
No Yes	Burkholderia ambifaria MC40-6		21	18
No Yes	Burkholderia cenocepacia MC0-3		23	19
No Yes	Burkholderia cenocepacia HI2424		23	19
No Yes	Burkholderia cenocepacia J2315		22	18
No Yes	Burkholderia multivorans ATCC 17616		21	18
No Yes	Caulobacter crescentus NA1000		18	15
No Yes	Zymomonas mobilis ssp. mobilis NCIMB 11163		16	14
No Yes	Rhodobacter sphaeroides KD131		19	16
No Yes	Rhodobacter sphaeroides ATCC 17025		19	16
No Yes	Rhodobacter sphaeroides ATCC 17029		20	17
No Yes	Gluconacetobacter diazotrophicus PAl 5		20	17
No Yes	Ehrlichia ruminantium Gardel		13	12
No Yes	Ehrlichia ruminantium Welgevonden		13	12
No Yes	Anaplasma marginale Florida		13	12
No Yes	Orientia tsutsugamushi Ikeda		13	12
No Yes	Rickettsia bellii OSU 85-389		16	14
No Yes	Rickettsia rickettsii Iowa		15	13
No Yes	Methylobacterium extorquens DM4		24	21
No Yes	Methylobacterium extorquens AM1		24	21
No Yes	Brucella suis ATCC 23445		19	16
No Yes	Brucella melitensis ATCC 23457		19	16
No Yes	Brucella abortus S19		19	16
No Yes	Brucella melitensis biov. Abortus 2308		18	15
No Yes	Rhizobium etli CIAT 652		19	16
No Yes	Rhizobium leguminosarum bv. trifolii WSM2304		19	16
No Yes	Rhizobium leguminosarum bv. trifolii WSM1325		19	16
No Yes	Rhodopseudomonas palustris TIE-1		21	18
No Yes	Rhodopseudomonas palustris HaA2		20	17
No Yes	Rhodopseudomonas palustris BisB5		20	17
No Yes	Rhodopseudomonas palustris BisB18		20	17
No Yes	Rhodopseudomonas palustris BisA53		20	17
No Yes	Bradyrhizobium sp. BTAi1		21	18
No Yes	Acidithiobacillus ferrooxidans ATCC 53993		20	17
No Yes	Haemophilus somnus 2336		21	19
No Yes	Haemophilus influenzae PittGG		20	17
No Yes	Haemophilus influenzae PittEE		23	20
No Yes	Haemophilus influenzae 86-028NP		23	20
No Yes	Actinobacillus pleuropneumoniae ser. 3 JL03		22	19
No Yes	Actinobacillus pleuropneumoniae ser. 7 AP76		23	20
No Yes	Vibrio fischeri MJ11		25	22
No Yes	Vibrio vulnificus CMCP6 (Poor annotation)		28	25
No Yes	Vibrio cholerae M66-2		25	22
No Yes	Vibrio cholerae O395		25	22
No Yes	Vibrio cholerae MJ-1236		26	23
No Yes	Shewanella sp. W3-18-1		25	22
No Yes	Shewanella sp. ANA-3		25	22
No Yes	Shewanella baltica OS223		26	23
No Yes	Shewanella baltica OS185		26	23
No Yes	Shewanella baltica OS195		25	22
No Yes	Shewanella sp. MR-4		25	22
No Yes	Stenotrophomonas maltophilia K279a		23	20
No Yes	Xylella fastidiosa M23		20	17
No Yes	Xylella fastidiosa M12		20	17
No Yes	Xylella fastidiosa Temecula1		20	17
No Yes	Xanthomonas campestris pv. vesicatoria 85-10 (Completed 2005)		22	19
No Yes	Xanthomonas oryzae pv. oryzae PXO99A		22	19
No Yes	Xanthomonas oryzae pv. oryzae MAFF 311018		22	19
No Yes	Xanthomonas campestris pv. campestris B100		22	19
No Yes	Xanthomonas campestris pv. campestris 8004 (Completed 2005)		22	19
No Yes	Thioalkalivibrio sp. K90mix		20	17
No Yes	Coxiella burnetii CbuK_Q154		19	17
No Yes	Coxiella burnetii CbuG_Q212		19	17
No Yes	Coxiella burnetii Dugway 5J108-111		18	16
No Yes	Coxiella burnetii RSA 331		18	16
No Yes	Legionella pneumophila Corby		21	18
No Yes	Legionella pneumophila Paris		21	18
No Yes	Legionella pneumophila Lens		21	18
No Yes	Dickeya dadantii Ech586		23	20
No Yes	Candidatus Blochmannia pennsylvanicus BPEN		14	11
No Yes	Buchnera aphidicola Cc		12	10
No Yes	Buchnera aphidicola Bp		13	11
No Yes	Buchnera aphidicola Tuc7		13	11
No Yes	Buchnera aphidicola 5A		13	11
No Yes	Buchnera aphidicola Sg		14	12
No Yes	Yersinia pseudotuberculosis PB1/+		25	22
No Yes	Yersinia pseudotuberculosis YPIII		24	21
No Yes	Yersinia pseudotuberculosis IP 31758		24	21
No Yes	Yersinia pestis Z176003		23	20
No Yes	Yersinia pestis Pestoides F		24	21
No Yes	Yersinia pestis Nepal516		25	22
No Yes	Yersinia pestis Antiqua		25	22
No Yes	Yersinia pestis Angola		23	20
No Yes	Yersinia pestis biov. Microtus 91001		24	21
No Yes	Yersinia pestis KIM		24	21
No Yes	Shigella flexneri 5 8401		22	19
No Yes	Shigella flexneri 2a 301		22	19
No Yes	Shigella boydii CDC 3083-94		23	20
No Yes	Salmonella enterica ssp. arizonae ser. 62:z4,z23:--		24	21
No Yes	Salmonella enterica ssp. enterica ser. Schwarzengrund CVM19633		22	20
No Yes	Salmonella enterica ssp. enterica ser. Enteritidis P125109		24	21
No Yes	Salmonella enterica ssp. enterica ser. Choleraesuis str. SC-B67		24	21
No Yes	Salmonella enterica ssp. enterica ser. Newport SL254		22	20
No Yes	Salmonella enterica ssp. enterica ser. Dublin CT_02021853		22	20
No Yes	Salmonella enterica ssp. enterica ser. Typhi CT18		23	20
No Yes	Salmonella enterica ssp. enterica ser. Typhi Ty2		23	20
No Yes	Salmonella enterica ssp. enterica ser. Agona SL483		23	21
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi C RKS4594		24	21
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi B SPB7		24	21
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi A AKU_12601		24	21
No Yes	Salmonella enterica ssp. enterica ser. Paratyphi A ATCC 9150		24	21
No Yes	Salmonella enterica ssp. enterica ser. Heidelberg SL476		22	20
No Yes	Salmonella enterica ssp. enterica ser. Gallinarum 287/91		24	21
No Yes	Klebsiella pneumoniae 342		25	22
No Yes	Klebsiella pneumoniae NTUH-K2044		25	22
No Yes	Escherichia coli ED1a		23	20
No Yes	Escherichia coli IAI39		23	20
No Yes	Escherichia coli UMN026		23	20
No Yes	Escherichia coli 55989		23	20
No Yes	Escherichia coli S88		23	20
No Yes	Escherichia coli IAI1		23	20
No Yes	Escherichia coli BL21		21	18
No Yes	Escherichia coli ATCC 8739		23	20
No Yes	Escherichia coli BL21(DE3)		22	19
No Yes	Escherichia coli SMS-3-5		24	21
No Yes	Escherichia coli SE11		23	20
No Yes	Escherichia coli APEC O1		23	20
No Yes	Escherichia coli O103:H2 12009		23	20
No Yes	Escherichia coli UTI89		23	20
No Yes	Escherichia coli 536		23	20
No Yes	Escherichia coli HS		24	21
No Yes	Escherichia coli E24377A		23	20
No Yes	Escherichia coli O55:H7 CB9615		23	20
No Yes	Escherichia coli O26:H11 11368		23	20
No Yes	Escherichia coli CFT073		23	20
No Yes	Escherichia coli O111:H- 11128		24	21
No Yes	Escherichia coli O127:H6 E2348/69		24	21
No Yes	Escherichia coli O157:H7 EDL933		23	20
No Yes	Escherichia coli O157:H7 TW14359		23	20
No Yes	Escherichia coli O157:H7 EC4115		23	20
No Yes	Escherichia coli O157:H7 Sakai		23	20
No Yes	Escherichia coli BW2952		23	20
No Yes	Escherichia coli K-12 subW3110		22	19
No Yes	Escherichia coli K-12 subDH10B		20	17
No Yes	Escherichia coli B REL606		23	20
No Yes	Erwinia amylovora CFBP1430		23	20
No Yes	Pseudomonas syringae pv. phaseolicola 1448A		22	19
No Yes	Pseudomonas syringae pv. syringae B728a		22	19
No Yes	Pseudomonas putida W619		22	19
No Yes	Pseudomonas putida F1		24	21
No Yes	Pseudomonas putida GB-1		23	20
No Yes	Pseudomonas fluorescens SBW25		22	19
No Yes	Pseudomonas fluorescens Pf0-1		22	19
No Yes	Pseudomonas aeruginosa LESB58		24	21
No Yes	Pseudomonas aeruginosa PA7		24	21
No Yes	Pseudomonas aeruginosa UCBPP-PA14		24	21
No Yes	Acinetobacter baumannii AB307-0294		21	18
No Yes	Acinetobacter baumannii AYE		19	16
No Yes	Acinetobacter baumannii SDF		19	16
No Yes	Acinetobacter baumannii AB0057		21	19
No Yes	Acinetobacter baumannii ACICU		21	18
No Yes	Francisella novicida U112		20	18
No Yes	Francisella tularensis ssp. mediasiatica FSC147		19	17
No Yes	Francisella tularensis ssp. holarctica FTNF002-00		18	16
No Yes	Francisella tularensis ssp. holarctica OSU18		17	15
No Yes	Francisella tularensis ssp. holarctica		18	16
No Yes	Francisella tularensis ssp. tularensis WY96-3418		18	16
No Yes	Francisella tularensis ssp. tularensis FSC198		18	16
No Yes	Prochlorococcus marinus NATL1A		15	12
No Yes	Prochlorococcus marinus MIT 9301		15	12
No Yes	Prochlorococcus marinus MIT 9515		15	12
No Yes	Prochlorococcus marinus AS9601		15	12
No Yes	Prochlorococcus marinus ssp. marinus CCMP1375		15	12
No Yes	Prochlorococcus marinus ssp. pastoris CCMP1986		15	12
No Yes	Prochlorococcus marinus MIT 9215		16	13
No Yes	Prochlorococcus marinus MIT 9211		15	12
No Yes	Prochlorococcus marinus MIT 9312		16	13
No Yes	Prochlorococcus marinus MIT 9303		17	14
No Yes	Prochlorococcus marinus NATL2A		15	12
No Yes	Cyanothece sp. PCC 8802		20	17
No Yes	Cyanothece sp. PCC 7425		19	16
No Yes	Cyanothece sp. PCC 7424		20	17
No Yes	Cyanothece sp. PCC 8801		20	17
No Yes	Synechococcus sp. JA-2-3Ba(2-13) (Poor annotation)		18	15
No Yes	Synechococcus sp. JA-3-3Ab (Poor annotation)		18	15
No Yes	Synechococcus sp. CC9902 (Poor annotation)		17	14
No Yes	Synechococcus sp. RCC307		16	13
No Yes	Synechococcus sp. CC9605 (Poor annotation)		16	13
No Yes	Synechococcus sp. WH 8102 (Good annotation)		18	15
No Yes	Synechococcus sp. CC9311		17	14
No Yes	Synechococcus sp. WH 7803		17	14
No Yes	Synechococcus sp. PCC 7002		20	17
No Yes	Synechococcus elongatus PCC 7942		19	16
No Yes	Methanococcus maripaludis C6		14	13
No Yes	Methanococcus maripaludis C7		14	13
No Yes	Methanococcus maripaludis C5		14	13
No Yes	Sulfolobus islandicus Y.G.57.14		14	13
No Yes	Sulfolobus islandicus L.S.2.15		14	13
No Yes	Sulfolobus islandicus M.16.27		14	13
No Yes	Sulfolobus islandicus M.14.25		14	13
No Yes	Sulfolobus islandicus M.16.4		14	13
No Yes	Sulfolobus islandicus L.D.8.5		14	13
No Yes	Ailuropoda melanoleuca (Draft)	Giant panda	34	33
No Yes	Moniliophthora perniciosa FA553 (Genome survey)		19	19
No Yes	Lotus japonicus (Early assembly)		6	6
No Yes	Prunus persica (Early draft)	Peach	62	59
No Yes	Manihot esculenta (Early draft)	Cassava	87	79
No Yes	Ricinus communis (Early assembly)	Castor bean	59	55
No Yes	Mimulus guttatus (Early draft)	Spotted monkey flower	62	58
No Yes	Phoenix dactylifera (Early draft)	Date palm	50	47
No Yes	Trypanosoma vivax (Parial)		30	29
No Yes	Trypanosoma congolense (Partial)		33	33
No Yes	Toxoplasma gondii GT1 (Early assembly)		28	28
No Yes	Toxoplasma gondii VEG (Early assembly)		28	28
No Yes	Toxoplasma gondii RH (Archived)		28	28
No Yes	Homo sapiens 49_36k (longest transcript per gene)	Human	48	47
No Yes	Pan troglodytes 49_21h (longest transcript per gene)	Chimpanzee	51	50
No Yes	Gorilla gorilla 52_1 (longest transcript per gene)	Western Gorilla	33	32
No Yes	Pongo pygmaeus 49_1 (longest transcript per gene)	Bornean orangutan	49	48
No Yes	Macaca mulatta 49_10h (longest transcript per gene)	Rhesus monkey	58	57
No Yes	Callithrix jacchus 56_3 (longest transcript per gene)	White-tufted-ear marmoset	61	60
No Yes	Otolemur garnettii 49_1c (longest transcript per gene)	Small-eared galago	34	33
No Yes	Microcebus murinus 49_1 (longest transcript per gene)	Gray mouse lemur	33	32
No Yes	Tarsius syrichta 51_1 (longest transcript per gene)	Philippine tarsier	29	28
No Yes	Rattus norvegicus 49_34s (longest transcript per gene)	Norway rat	75	74
No Yes	Mus musculus 49_37b (longest transcript per gene)	House mouse	45	44
No Yes	Spermophilus tridecemlineatus 49_1e (longest transcript per gene)	Thirteen-lined ground squirrel	31	30
No Yes	Dipodomys ordii 51_1 (longest transcript per gene)	Ord's kangaroo rat	30	29
No Yes	Cavia porcellus 51_3 (longest transcript per gene)	Domestic guinea pig	41	40
No Yes	Oryctolagus cuniculus 49_1f (longest transcript per gene)	Rabbit	34	33
No Yes	Ochotona princeps 49_1 (longest transcript per gene)	American pika	31	30
No Yes	Tupaia belangeri 49_1d (longest transcript per gene)	Northern tree shrew	33	32
No Yes	Sus scrofa 56_9 (longest transcript per gene)	Pig	27	27
No Yes	Bos taurus 49_3f (longest transcript per gene)	Cattle	39	38
No Yes	Vicugna pacos 51_1 (longest transcript per gene)	Alpaca	23	22
No Yes	Tursiops truncatus 51_1 (longest transcript per gene)	Bottlenosed dolphin	32	31
No Yes	Canis familiaris 49_2g (longest transcript per gene)	Dog	44	43
No Yes	Felis catus 49_1c (longest transcript per gene)	Domestic cat	29	28
No Yes	Equus caballus 49_2 (longest transcript per gene)	Horse	32	31
No Yes	Myotis lucifugus 49_1e (longest transcript per gene)	Little brown bat	31	31
No Yes	Pteropus vampyrus 51_1 (longest transcript per gene)	Large flying fox	35	34
No Yes	Sorex araneus 49_1c (longest transcript per gene)	European shrew	28	27
No Yes	Erinaceus europaeus 49_1c (longest transcript per gene)	Western European hedgehog	26	25
No Yes	Procavia capensis 51_1 (longest transcript per gene)	Cape rock hyrax	31	30
No Yes	Loxodonta africana 49_1d (longest transcript per gene)	African savanna elephant	25	25
No Yes	Echinops telfairi 49_1e (longest transcript per gene)	Small Madagascar hedgehog	33	32
No Yes	Dasypus novemcinctus 49_1f (longest transcript per gene)	Nine-banded armadillo	31	30
No Yes	Macropus eugenii 55_1 (longest transcript per gene)	Tammar wallaby	31	31
No Yes	Monodelphis domestica 49_5d (longest transcript per gene)	Gray short-tailed opossum	38	37
No Yes	Ornithorhynchus anatinus 49_1f (longest transcript per gene)	Platypus	28	28
No Yes	Anolis carolinensis 55_1a (longest transcript per gene)	Green anole	32	31
No Yes	Taeniopygia guttata 57_1c (longest transcript per gene)	Zebra finch	33	32
No Yes	Meleagris gallopavo 57_2 (longest transcript per gene)	Turkey	32	31
No Yes	Gallus gallus 49_2g (longest transcript per gene)	Chicken	32	31
No Yes	Xenopus tropicalis 49_41i (longest transcript per gene)	Western clawed frog	34	33
No Yes	Danio rerio 49_7c (longest transcript per gene)	Zebrafish	35	35
No Yes	Gasterosteus aculeatus 49_1f (longest transcript per gene)	Three-spined stickleback	35	34
No Yes	Oryzias latipes 49_1e (longest transcript per gene)	Japanese medaka	34	33
No Yes	Tetraodon nigroviridis 49_1k (longest transcript per gene)	Spotted green pufferfish	39	38
No Yes	Takifugu rubripes 49_4i (longest transcript per gene)	Torafugu	38	37
No Yes	Ciona savignyi 49_2f (longest transcript per gene)		23	23
No Yes	Ciona intestinalis 49_2i (longest transcript per gene)		29	29
No Yes	Apis mellifera 37.2d (longest transcript per gene) (Not maintained)	Honey bee	27	26
No Yes	Drosophila melanogaster FlyBase 5.12 (longest transcript per gene) (FlyBase)	Fruit fly	36	33
No Yes	Drosophila melanogaster Ensembl 49_54 (longest transcript per gene)	Fruit fly	28	25
No Yes	Aedes aegypti 49_1b (longest transcript per gene)	Yellow fever mosquito	33	32
No Yes	Anopheles gambiae 49_3j (longest transcript per gene)	African malaria mosquito	27	26
No Yes	Caenorhabditis elegans WormBase WS194 (longest transcript per gene) (WormBase)	Nematode	42	41
No Yes	Caenorhabditis elegans Ensembl 49_180a (longest transcript per gene)	Nematode	42	41
No Yes	Arabidopsis thaliana 9 (longest transcript per gene)	Thale cress	80	71
No Yes	Oryza sativa ssp. japonica 5.0 (Not transposons)	Japanese rice	102	94
No Yes	NCBI viral sequences (Viral)		29	29
No Yes	PDB chains (SCOP 1.73) (PDB)		81	73
No Yes	TargetDB (Targets)		795	731
No Yes	UniProt 15.0 (UniProt)		35737	32701
No Yes	UniProt 15.0 viral sequences (Viral)		26	26