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Tubby C-terminal domain-like superfamily domain assignments
in
Saccharomyces paradoxus MIT

Assignment details

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Saccharomyces paradoxus MIT has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ORFP:12675   0.0000602   11-180   At5g01750-like  

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Select to display   Genome       Domains   Proteins
No Yes ALL   46999 46999
No Yes Homo sapiens 76_38 Human 20 20
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 6 6
No Yes Gorilla gorilla 76_3.1 Western gorilla 9 9
No Yes Pongo abelii 76_2 Sumatran orangutan 6 6
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 5 5
No Yes Papio anubis 76 Olive baboon 7 7
No Yes Macaca mulatta 76_1 Rhesus monkey 9 9
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 15 15
No Yes Otolemur garnettii 76_3 Small-eared galago 8 8
No Yes Microcebus murinus 76_1 Gray mouse lemur 5 5
No Yes Rattus norvegicus 76_5.0 Norway rat 6 6
No Yes Mus musculus 76_38 House mouse 21 21
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 5 4
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 7 7
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 10 9
No Yes Cavia porcellus 76_3 Domestic guinea pig 7 7
No Yes Oryctolagus cuniculus 76_2 Rabbit 8 8
No Yes Ochotona princeps 76 American pika 5 5
No Yes Tupaia belangeri 76 Northern tree shrew 4 4
No Yes Sus scrofa 76_10.2 Pig 4 4
No Yes Bos taurus 76_3.1 Cattle 7 7
No Yes Ovis aries 76_3.1 Sheep 8 8
No Yes Vicugna pacos 76_1 Alpaca 3 3
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 5 5
No Yes Mustela putorius furo 76_1.0 Domestic ferret 7 7
No Yes Ailuropoda melanoleuca 76_1 Giant panda 7 7
No Yes Canis familiaris 76_3.1 Dog 10 10
No Yes Felis catus 76_6.2 Domestic cat 7 7
No Yes Equus caballus 76_2 Horse 6 6
No Yes Myotis lucifugus 76_2.0 Little brown bat 6 6
No Yes Pteropus vampyrus 76_1 Large flying fox 5 5
No Yes Sorex araneus 76_1 European shrew 5 4
No Yes Erinaceus europaeus 76 Western European hedgehog 6 5
No Yes Procavia capensis 76_1 Cape rock hyrax 6 5
No Yes Loxodonta africana 76_3 African savanna elephant 11 11
No Yes Echinops telfairi 76 Small Madagascar hedgehog 5 5
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 6 6
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 3 3
No Yes Macropus eugenii 76_1.0 Tammar wallaby 6 6
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 7 7
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 7 7
No Yes Ornithorhynchus anatinus 76_5 Platypus 7 7
No Yes Saccoglossus kowalevskii v3.0   8 8
No Yes Petromyzon marinus 76_7.0 Sea lamprey 2 2
No Yes Meleagris gallopavo 76_2 Turkey 5 5
No Yes Gallus gallus 76_4 Chicken 5 5
No Yes Anas platyrhynchos 76_1.0 Mallard 4 4
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 4 4
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 5 5
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 9 9
No Yes Anolis carolinensis 76_2.0 Green anole 9 9
No Yes Xenopus laevis African clawed frog 9 9
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 10 9
No Yes Latimeria chalumnae 76_1 Coelacanth 11 9
No Yes Lepisosteus oculatus 76 Spotted gar 9 9
No Yes Gadus morhua 76_1 Atlantic cod 8 8
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 11 10
No Yes Takifugu rubripes 76_4 Torafugu 21 19
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 13 12
No Yes Oryzias latipes 76_1 Japanese medaka 8 8
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 9 8
No Yes Poecilia formosa 76 Amazon molly 11 10
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 11 10
No Yes Astyanax mexicanus 76 Mexican tetra 14 13
No Yes Danio rerio 76_9 Zebrafish 27 25
No Yes Oikopleura dioica   4 4
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 5 5
No Yes Ciona intestinalis 76 Vase tunicate 5 5
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 9 9
No Yes Adineta vaga   38 38
No Yes Octopus bimaculoides 280   4 4
No Yes Crassostrea gigas 22 Pacific oyster 6 6
No Yes Lottia gigantea Owl limpet 6 6
No Yes Helobdella robusta   3 3
No Yes Capitella sp. I   6 6
No Yes Danaus plexippus OGS1.0 Monarch butterfly 4 4
No Yes Heliconius melpomene Postman butterfly 2 2
No Yes Bombyx mori Domestic silkworm 2 2
No Yes Nasonia vitripennis Jewel wasp 2 2
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 6 6
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 3 3
No Yes Linepithema humile v1.1 Argentine ant 4 4
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 3 3
No Yes Solenopsis invicta v.2.2.3 Red fire ant 3 3
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 3 3
No Yes Atta cephalotes v1.1   4 4
No Yes Camponotus floridanus v3.3 Florida carpenter ant 3 3
No Yes Lucilia cuprina Australian sheep blowfly 3 3
No Yes Drosophila grimshawi 1.3   4 4
No Yes Drosophila willistoni 1.3   4 4
No Yes Drosophila pseudoobscura 2.13   5 5
No Yes Drosophila persimilis 1.3   5 5
No Yes Drosophila suzukii   5 5
No Yes Drosophila yakuba 1.3   4 4
No Yes Drosophila simulans 1.3   4 4
No Yes Drosophila sechellia 1.3   5 5
No Yes Drosophila melanogaster 76_5 Fruit fly 8 8
No Yes Drosophila erecta 1.3   3 3
No Yes Drosophila ananassae 1.3   5 5
No Yes Drosophila virilis 1.2   3 3
No Yes Drosophila mojavensis 1.3   3 3
No Yes Megaselia scalaris 22   1 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 4 4
No Yes Culex pipiens quinquefasciatus Southern house mosquito 6 6
No Yes Anopheles darlingi 22 American malaria mosquito 3 3
No Yes Anopheles gambiae 49_3j African malaria mosquito 8 8
No Yes Tribolium castaneum 3.0 Red flour beetle 3 3
No Yes Pediculus humanus corporis (Early assembly) Human body louse 3 3
No Yes Acyrthosiphon pisum Pea aphid 2 2
No Yes Rhodnius prolixus 22   2 2
No Yes Daphnia pulex Common water flea 5 5
No Yes Strigamia maritima 22   3 3
No Yes Sarcoptes scabiei   3 3
No Yes Tetranychus urticae Two-spotted spider mite 8 8
No Yes Ixodes scapularis (Preliminary) Black-legged tick 4 4
No Yes Pristionchus pacificus   4 4
No Yes Meloidogyne incognita Southern root-knot nematode 2 2
No Yes Meloidogyne hapla   1 1
No Yes Onchocerca volvulus 22   3 3
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 2 2
No Yes Caenorhabditis japonica   4 4
No Yes Caenorhabditis brenneri   6 6
No Yes Caenorhabditis remanei   3 3
No Yes Caenorhabditis elegans 76_235 Roundworm 7 7
No Yes Caenorhabditis briggsae 2   3 3
No Yes Trichinella spiralis 22   2 2
No Yes Hymenolepis microstoma   2 2
No Yes Echinococcus multilocularis   1 1
No Yes Echinococcus granulosus   2 2
No Yes Taenia solium Pork tapeworm 1 1
No Yes Schistosoma mansoni   1 1
No Yes Mnemiopsis leidyi Sea walnut 6 6
No Yes Acropora digitifera v1.0   2 2
No Yes Nematostella vectensis 1.0 Starlet sea anemone 4 4
No Yes Hydra vulgaris   1 1
No Yes Amphimedon queenslandica   4 4
No Yes Trichoplax adhaerens   6 6
No Yes Proterospongia sp. ATCC 50818   1 1
No Yes Monosiga brevicollis   1 1
No Yes Sphaeroforma arctica JP610   4 4
No Yes Capsaspora owczarzaki ATCC 30864   1 1
No Yes Conidiobolus coronatus NRRL28638 v1.0   1 1
No Yes Mortierella verticillata NRRL 6337   2 2
No Yes Phycomyces blakesleeanus   2 2
No Yes Rhizopus oryzae RA 99-880   2 2
No Yes Mucor circinelloides   2 2
No Yes Rhizomucor miehei CAU432   2 2
No Yes Sporisorium reilianum 22   1 1
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   2 2
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   3 3
No Yes Rhodotorula graminis WP1 v1.0   1 1
No Yes Microbotryum violaceum 22   1 1
No Yes Serpula lacrymans var. lacrymans S7.9   1 1
No Yes Coniophora puteana   1 1
No Yes Amanita thiersii Skay4041 v1.0   1 1
No Yes Amanita muscaria Koide v1.0 Fly agaric 1 1
No Yes Laccaria bicolor S238N-H82   1 1
No Yes Stereum hirsutum FP-91666 SS1 v1.0   8 8
No Yes Heterobasidion annosum   1 1
No Yes Gloeophyllum trabeumv1.0   2 2
No Yes Punctularia strigosozonata v1.0   4 4
No Yes Sebacina vermifera MAFF 305830 v1.0   3 3
No Yes Tulasnella calospora AL13/4D v1.0   2 2
No Yes Phanerochaete chrysosporium RP-78 2.1   1 1
No Yes Dichomitus squalens   1 1
No Yes Trametes versicolor v1.0   1 1
No Yes Tremella mesenterica Witches' butter 3 3
No Yes Daldinia eschscholzii EC12 v1.0   2 2
No Yes Apiospora montagnei NRRL 25634 v1.0   2 2
No Yes Magnaporthe poae ATCC 64411 22   2 2
No Yes Podospora anserina   1 1
No Yes Sporotrichum thermophile ATCC 42464   2 2
No Yes Neurospora discreta FGSC 8579   1 1
No Yes Cryphonectria parasitica Chestnut blight fungus 2 2
No Yes Acremonium alcalophilumv 1.0   1 1
No Yes Glomerella graminicola 22   1 1
No Yes Fusarium graminearum   1 1
No Yes Nectria haematococca mpVI   1 1
No Yes Fusarium oxysporum f. sp. lycopersici 4286   1 1
No Yes Fusarium verticillioides 7600   1 1
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Leptosphaeria maculans 22   1 1
No Yes Pyrenophora teres f. teres 22   1 1
No Yes Pyrenophora tritici-repentis   1 1
No Yes Stagonospora nodorum   2 2
No Yes Mycosphaerella graminicola IPO323   3 3
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Dothistroma septosporum   1 1
No Yes Septoria musiva v1.0   1 1
No Yes Mycosphaerella fijiensis CIRAD86   2 2
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   5 5
No Yes Penicillium chrysogenum v1.0   5 5
No Yes Aspergillus acidus v1.0   3 3
No Yes Aspergillus fumigatus Af293   2 2
No Yes Aspergillus brasiliensis v1.0   4 4
No Yes Aspergillus nidulans FGSC A4   1 1
No Yes Aspergillus sydowii v1.0   2 2
No Yes Aspergillus versicolor v1.0   2 2
No Yes Aspergillus glaucus   5 5
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Neosartorya fischeri NRRL 181   4 4
No Yes Aspergillus terreus NIH2624   3 3
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus wentii v1.0   6 6
No Yes Aspergillus oryzae RIB40   3 3
No Yes Aspergillus niger 22   2 2
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Aspergillus flavus NRRL3357   4 4
No Yes Aspergillus clavatus NRRL 1   4 4
No Yes Penicillium marneffei ATCC 18224   1 1
No Yes Hansenula polymorpha v2.0   1 1
No Yes Dekkera bruxellensis CBS 2499 v2.0   1 1
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   1 1
No Yes Candida tropicalis MYA-3404   1 1
No Yes Candida parapsilosis   1 1
No Yes Candida albicans SC5314   1 1
No Yes Lodderomyces elongisporus NRRL YB-4239   1 1
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   1 1
No Yes Candida guilliermondii ATCC 6260   1 1
No Yes Wickerhamomyces anomalus   1 1
No Yes Yarrowia lipolytica CLIB122   1 1
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Kluyveromyces lactis   1 1
No Yes Schizosaccharomyces octosporus yFS286   1 1
No Yes Schizosaccharomyces japonicus yFS275   1 1
No Yes Schizosaccharomyces pombe Fission yeast 1 1
No Yes Catenaria anguillulae PL171 v1.0   8 8
No Yes Allomyces macrogynus ATCC 38327   11 11
No Yes Spizellomyces punctatus DAOM BR117   4 4
No Yes Dictyostelium discoideum   1 1
No Yes Dictyostelium purpureum   3 3
No Yes Entamoeba invadens 1.2   1 1
No Yes Selaginella moellendorffii   27 26
No Yes Pinus taeda Loblolly pine 107 97
No Yes Picea abies Norway spruce 47 47
No Yes Eucalyptus grandis v201 Rose gum 29 29
No Yes Theobroma cacao B97-61/B2 v1 Cacao 28 28
No Yes Gossypium raimondii v221   81 81
No Yes Citrus clementina v165   45 45
No Yes Citrus sinensis v154 Sweet orange 63 61
No Yes Thellungiella halophila v173   36 36
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 48 48
No Yes Capsella rubella v183   30 30
No Yes Arabidopsis lyrata Lyrate rockcress 33 33
No Yes Arabidopsis thaliana 10 Thale cress 45 45
No Yes Carica papaya Papaya 16 16
No Yes Medicago truncatula Barrel medic 54 54
No Yes Phaseolus vulgaris v186 French bean 41 41
No Yes Glycine max v109 Soybean 75 75
No Yes Cucumis sativus v122 Cucumber 32 32
No Yes Fragaria vesca Wild strawberry 25 24
No Yes Malus domestica v196 Apple 43 42
No Yes Prunus persica v139 Peach 30 30
No Yes Linum usitatissimum v200 Flax 49 48
No Yes Manihot esculenta v147 Cassava 46 46
No Yes Populus trichocarpa v156 Black cottonwood 49 49
No Yes Vitis vinifera Wine grape 27 26
No Yes Mimulus guttatus v140 Spotted monkey flower 27 27
No Yes Solanum lycopersicum v.2.3 Tomato 31 30
No Yes Solanum tuberosum Potato 53 53
No Yes Actinidia chinensis Hongyang   43 41
No Yes Aquilegia coerulea v195   27 27
No Yes Triticum urartu 22   42 42
No Yes Triticum aestivum 22 Bread wheat 98 98
No Yes Aegilops tauschii 22   43 42
No Yes Brachypodium distachyon Stiff brome 30 30
No Yes Oryza barthii 22 African wild rice 59 51
No Yes Oryza meridionalis 22   48 46
No Yes Oryza glumaepatula 22   51 47
No Yes Oryza glaberrima African rice 31 31
No Yes Oryza punctata 22   51 45
No Yes Oryza nivara 22   60 56
No Yes Oryza brachyantha 22 Malo sina 37 36
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 54 54
No Yes Oryza sativa v193 Rice 54 54
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 39 39
No Yes Panicum virgatum v202 Switchgrass 87 87
No Yes Setaria italica v164 Foxtail millet 61 61
No Yes Zea mays subsp. mays Maize 66 63
No Yes Zea mays v181 Maize 71 69
No Yes Sorghum bicolor Sorghum 51 42
No Yes Musa balbisiana Balbis banana 50 47
No Yes Musa acuminata 22 Wild Malaysian banana 49 49
No Yes Amborella trichopoda 22   16 16
No Yes Physcomitrella patens   18 18
No Yes Coccomyxa subellipsoidea sp. C-169 v2   3 3
No Yes Asterochloris sp. Cgr/DA1pho v1.0   3 3
No Yes Chlorella variabilis sp. NC64A   5 5
No Yes Chlorella vulgaris   3 3
No Yes Volvox carteri f. nagariensis   4 4
No Yes Volvox carteri v199   3 3
No Yes Chlamydomonas reinhardtii 4.0   6 6
No Yes Ostreococcus sp. RCC809   1 1
No Yes Ostreococcus lucimarinus CCE9901   1 1
No Yes Ostreococcus tauri   1 1
No Yes Bathycoccus prasinos   3 2
No Yes Micromonas sp. RCC299   1 1
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Porphyridium purpureum 02_2012   5 5
No Yes Thecamonas trahens ATCC 50062   2 2
No Yes Bigelowiella natans CCMP2755 22   2 1
No Yes Cyanophora paradoxa   6 6
No Yes Leishmania mexicana 2.4   1 1
No Yes Leishmania major strain Friedlin   1 1
No Yes Leishmania infantum JPCM5 2.4   1 1
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Ectocarpus siliculosus   8 8
No Yes Aureococcus anophagefferens   3 3
No Yes Albugo laibachii 22   5 5
No Yes Pythium iwayamai DAOM BR242034 22   26 26
No Yes Pythium arrhenomanes ATCC 12531 22   12 12
No Yes Pythium ultimum v1.7-2   18 18
No Yes Pythium aphanidermatum DAOM BR444 22   15 15
No Yes Pythium irregulare DAOM BR486 22   22 22
No Yes Pythium vexans DAOM BR484 22   11 10
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 10 10
No Yes Phytophthora sojae 1.1   9 9
No Yes Phytophthora infestans T30-4   8 8
No Yes Phytophthora capsici   11 11
No Yes Hyaloperonospora arabidopsidis 22   5 5
No Yes Phaeodactylum tricornutumCCAP 1055/1   4 4
No Yes Fragilariopsis cylindrus   9 9
No Yes Thalassiosira pseudonana CCMP1335   3 3
No Yes Perkinsus marinus ATCC 50983   3 3
No Yes Paramecium tetraurelia   25 24
No Yes Tetrahymena thermophila SB210 1   3 3
No Yes Ichthyophthirius multifiliis strain G5   2 2
No Yes Neospora caninum   1 1
No Yes Toxoplasma gondii VEG   1 1
No Yes Toxoplasma gondii ME49   1 1
No Yes Toxoplasma gondii GT1   1 1
No Yes Plasmodium falciparum 3D7   1 1
No Yes Plasmodium vivax SaI-1 7.0   1 1
No Yes Plasmodium knowlesi strain H   1 1
No Yes Plasmodium yoelii ssp. yoelii 1   1 1
No Yes Plasmodium chabaudi   1 1
No Yes Plasmodium berghei ANKA   1 1
No Yes Symbiodinium minutum clade B1 v1.2   11 10
No Yes Naegleria gruberi   2 2
No Yes Trichomonas vaginalis   18 18
No Yes Guillardia theta CCMP2712 v1.0   6 6
No Yes Emiliania huxleyi CCMP1516   11 11
No Yes Acaryochloris marina MBIC11017   1 1
No Yes Synechococcus sp. PCC 7502   1 1
No Yes Microcoleus sp. PCC 7113   1 1
No Yes Anabaena variabilis ATCC 29413   1 1
No Yes Rubrobacter xylanophilus DSM 9941   1 1
No Yes Ilumatobacter coccineus   1 1
No Yes Nakamurella multipartita DSM 44233   2 2
No Yes Modestobacter marinus   1 1
No Yes Blastococcus saxobsidens DD2   1 1
No Yes Stackebrandtia nassauensis DSM 44728   1 1
No Yes Frankia sp. EAN1pec   1 1
No Yes Frankia alni ACN14a   1 1
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   1 1
No Yes Thermomonospora curvata DSM 43183   1 1
No Yes Kitasatospora setae KM-6054   2 2
No Yes Streptomyces coelicolor A3(2)   1 1
No Yes Streptomyces sp. PAMC26508   3 3
No Yes Streptomyces flavogriseus ATCC 33331   3 3
No Yes Streptomyces sp. SirexAA-E   2 2
No Yes Streptomyces griseus subsp. griseus NBRC 13350   1 1
No Yes Streptomyces bingchenggensis BCW-1   1 1
No Yes Streptomyces violaceusniger Tu 4113   1 1
No Yes Streptomyces avermitilis MA-4680   2 2
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   2 2
No Yes Streptomyces scabiei 87.22   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   2 2
No Yes Saccharopolyspora erythraea NRRL 2338   1 1
No Yes Amycolatopsis mediterranei U32   1 1
No Yes Kribbella flavida DSM 17836   1 1
No Yes Propionibacterium propionicum F0230a   1 1
No Yes Microlunatus phosphovorus NM-1   1 1
No Yes Micromonospora sp. L5   1 1
No Yes Micromonospora aurantiaca ATCC 27029   1 1
No Yes Actinoplanes sp. N902-109   1 1
No Yes Actinoplanes sp. SE50/110   2 2
No Yes Actinoplanes missouriensis 431   1 1
No Yes Gordonia polyisoprenivorans VH2   1 1
No Yes Corynebacterium aurimucosum ATCC 700975   1 1
No Yes Corynebacterium efficiens YS-314   1 1
No Yes Corynebacterium glutamicum R   1 1
No Yes Xylanimonas cellulosilytica DSM 15894   1 1
No Yes Arthrobacter arilaitensis Re117   1 1
No Yes Rothia dentocariosa ATCC 17931   1 1
No Yes Micrococcus luteus NCTC 2665   1 1
No Yes Bifidobacterium adolescentis ATCC 15703   1 1
No Yes Anaerococcus prevotii DSM 20548   1 1
No Yes Acidaminococcus intestini RyC-MR95   1 1
No Yes Acidaminococcus fermentans DSM 20731   1 1
No Yes Erysipelothrix rhusiopathiae str. Fujisawa   1 1
No Yes Clostridium clariflavum DSM 19732   1 1
No Yes Eubacterium siraeum   1 1
No Yes Ruminococcus sp.   1 1
No Yes butyrate-producing bacterium SS3/4   1 1
No Yes Eubacterium limosum KIST612   1 1
No Yes Clostridium sticklandii DSM 519   1 1
No Yes Clostridium saccharolyticum WM1   1 1
No Yes Clostridium phytofermentans ISDg   1 1
No Yes [Ruminococcus] obeum   1 1
No Yes Coprococcus sp. ART55/1   1 1
No Yes Roseburia intestinalis   1 1
No Yes Clostridium cellulovorans 743B   1 1
No Yes Clostridium botulinum A str. ATCC 3502   1 1
No Yes Carnobacterium sp. 17-4   2 2
No Yes Carnobacterium sp. WN1359   2 2
No Yes Aerococcus urinae ACS-120-V-Col10a   1 1
No Yes Tetragenococcus halophilus NBRC 12172   2 2
No Yes Melissococcus plutonius DAT561   1 1
No Yes Enterococcus hirae ATCC 9790   1 1
No Yes Enterococcus faecium Aus0004   1 1
No Yes Enterococcus faecalis 62   1 1
No Yes Weissella koreensis KACC 15510   1 1
No Yes Oenococcus oeni PSU-1   1 1
No Yes Leuconostoc sp. C2   2 2
No Yes Leuconostoc kimchii IMSNU 11154   2 2
No Yes Leuconostoc citreum KM20   1 1
No Yes Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293   2 2
No Yes Leuconostoc gasicomitatum LMG 18811   1 1
No Yes Lactobacillus casei ATCC 334   1 1
No Yes Lactobacillus rhamnosus Lc 705   1 1
No Yes Lactobacillus johnsonii FI9785   1 1
No Yes Lactobacillus salivarius CECT 5713   1 1
No Yes Lactobacillus ruminis ATCC 27782   1 1
No Yes Lactobacillus amylovorus GRL1118   1 1
No Yes Lactobacillus sakei subsp. sakei 23K   1 1
No Yes Lactobacillus gasseri ATCC 33323   1 1
No Yes Lactobacillus plantarum JDM1   1 1
No Yes Lactobacillus helveticus DPC 4571   1 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365   1 1
No Yes Lactobacillus buchneri NRRL B-30929   1 1
No Yes Lactobacillus buchneri   1 1
No Yes Lactobacillus brevis ATCC 367   1 1
No Yes Lactobacillus acidophilus 30SC   1 1
No Yes Pediococcus claussenii ATCC BAA-344   1 1
No Yes Pediococcus pentosaceus ATCC 25745   1 1
No Yes Streptococcus sp. I-P16   1 1
No Yes Streptococcus sp. I-G2   1 1
No Yes Streptococcus intermedius JTH08   1 1
No Yes Streptococcus gallolyticus UCN34   1 1
No Yes Streptococcus pseudopneumoniae IS7493   1 1
No Yes Streptococcus pasteurianus ATCC 43144   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis GGS_124   1 1
No Yes Streptococcus infantarius subsp. infantarius CJ18   1 1
No Yes Streptococcus macedonicus ACA-DC 198   1 1
No Yes Streptococcus mitis B6   1 1
No Yes Streptococcus parasanguinis ATCC 15912   1 1
No Yes Streptococcus pneumoniae P1031   1 1
No Yes Streptococcus agalactiae A909   1 1
No Yes Streptococcus mutans NN2025   1 1
No Yes Streptococcus suis P1/7   1 1
No Yes Streptococcus sanguinis SK36   1 1
No Yes Streptococcus oralis Uo5   1 1
No Yes Streptococcus gordonii str. Challis substr. CH1   1 1
No Yes Exiguobacterium sp. MH3   1 1
No Yes Exiguobacterium sp. AT1b   2 2
No Yes Exiguobacterium sibiricum 255-15   2 2
No Yes Paenibacillus sp. JDR-2   1 1
No Yes Solibacillus silvestris StLB046   1 1
No Yes Bacillus sp. JS   1 1
No Yes Bacillus sp. 1NLA3E   1 1
No Yes Bacillus amyloliquefaciens FZB42   1 1
No Yes Bacillus atrophaeus 1942   1 1
No Yes Bacillus subtilis subsp. subtilis str. 168   1 1
No Yes Bacillus clausii KSM-K16   1 1
No Yes Bacillus cellulosilyticus DSM 2522   1 1
No Yes Bacillus pumilus SAFR-032   1 1
No Yes Saprospira grandis str. Lewin   2 2
No Yes Chitinophaga pinensis DSM 2588   1 1
No Yes Flexibacter litoralis DSM 6794   1 1
No Yes Solitalea canadensis DSM 3403   1 1
No Yes Flavobacteriaceae bacterium 3519-10   1 1
No Yes Flavobacterium psychrophilum JIP02/86   1 1
No Yes Flavobacterium branchiophilum FL-15   1 1
No Yes Flavobacterium johnsoniae UW101   1 1
No Yes Planctomyces limnophilus DSM 3776   1 1
No Yes Pirellula staleyi DSM 6068   1 1
No Yes Candidatus Saccharibacteria bacterium RAAC3_TM7_1   1 1
No Yes Desulfatibacillum alkenivorans AK-01   1 1
No Yes Desulfobacterium autotrophicum HRM2   1 1
No Yes Pelobacter carbinolicus DSM 2380   1 1
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Stigmatella aurantiaca DW4/3-1   1 1
No Yes Corallococcus coralloides DSM 2259   2 2
No Yes Myxococcus xanthus DK 1622   2 2
No Yes Myxococcus fulvus HW-1   2 2
No Yes Methylotenera versatilis 301   1 1
No Yes Psychromonas sp. CNPT3   1 1
No Yes Marinomonas mediterranea MMB-1   1 1
No Yes halophilic archaeon DL31   1 1
No Yes Methanocella arvoryzae MRE50   1 1
No Yes Methanocella paludicola SANAE   1 1
No Yes Methanosarcina acetivorans C2A   1 1
No Yes Methanosarcina mazei Go1   1 1
No Yes Methanosarcina barkeri str. Fusaro   2 2
No Yes Methanoculleus bourgensis MS2   2 2
No Yes Salinarchaeum sp. Harcht-Bsk1   1 1
No Yes Haloterrigena turkmenica DSM 5511   1 1
No Yes Natrinema sp. J7-2   1 1
No Yes Halorubrum lacusprofundi ATCC 49239   1 1
No Yes Haloquadratum walsbyi DSM 16790   1 1
No Yes Halomicrobium mukohataei DSM 12286   1 1
No Yes Halorhabdus utahensis DSM 12940   1 1
No Yes Haloarcula hispanica ATCC 33960   1 1
No Yes Haloarcula marismortui ATCC 43049   1 1
No Yes Halalkalicoccus jeotgali B3   2 2
No Yes Halobacterium salinarum R1   1 1
No Yes Halobacterium sp. NRC-1   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 15 13
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 8 8
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 9 9
No Yes Ascaris suum Victoria/Ghent Pig roundworm 2 2
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 6 6
No Yes Cryptococcus neoformans var. grubii H99   1 1
No Yes Cryptococcus neoformans B-3501A   2 2
No Yes Cryptococcus neoformans JEC21   1 1
No Yes Aspergillus fumigatus A1163   3 3
No Yes Schizosaccharomyces pombe 972h-   1 1
No Yes Batrachochytrium dendrobatidis JEL423   4 4
No Yes Batrachochytrium dendrobatidis JAM81   4 4
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 27 27
No Yes Hordeum vulgare 22 Domesticated barley 66 66
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 41 40
No Yes Neospora caninum Nc-Liverpool 6.2   1 1
No Yes Plasmodium falciparum Dd2   1 1
No Yes Frankia sp. EuI1c   1 1
No Yes Nocardiopsis alba ATCC BAA-2165   3 3
No Yes Streptomyces albus J1074   1 1
No Yes Streptomyces rapamycinicus NRRL 5491   1 1
No Yes Streptomyces davawensis JCM 4913   2 2
No Yes Streptomyces fulvissimus DSM 40593   2 2
No Yes Streptomyces venezuelae ATCC 10712   1 1
No Yes Streptomyces collinus Tu 365   2 2
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   2 2
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   2 2
No Yes Saccharothrix espanaensis DSM 44229   1 1
No Yes Amycolatopsis mediterranei RB   1 1
No Yes Amycolatopsis mediterranei S699   1 1
No Yes Amycolatopsis mediterranei S699   1 1
No Yes Amycolatopsis orientalis HCCB10007   1 1
No Yes Propionibacterium acidipropionici ATCC 4875   2 2
No Yes Actinoplanes friuliensis DSM 7358   2 2
No Yes Corynebacterium halotolerans YIM 70093 = DSM 44683   1 1
No Yes Corynebacterium glutamicum MB001   1 1
No Yes Corynebacterium glutamicum SCgG2   1 1
No Yes Corynebacterium glutamicum SCgG1   1 1
No Yes Corynebacterium glutamicum ATCC 13032   1 1
No Yes Corynebacterium glutamicum ATCC 13032   1 1
No Yes Corynebacterium glutamicum ATCC 13032   1 1
No Yes Erysipelothrix rhusiopathiae SY1027   1 1
No Yes Eubacterium siraeum V10Sc8a   1 1
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532   1 1
No Yes Faecalibacterium prausnitzii L2-6   1 1
No Yes Ruminococcus champanellensis 18P13   1 1
No Yes Clostridium acidurici 9a   1 1
No Yes Coprococcus catus GD/7   1 1
No Yes Roseburia intestinalis XB6B4   1 1
No Yes Clostridium botulinum H04402 065   1 1
No Yes Clostridium botulinum F str. 230613   1 1
No Yes Clostridium botulinum F str. Langeland   1 1
No Yes Clostridium botulinum B1 str. Okra   1 1
No Yes Clostridium botulinum Ba4 str. 657   1 1
No Yes Clostridium botulinum A2 str. Kyoto   1 1
No Yes Clostridium botulinum A3 str. Loch Maree   1 1
No Yes Clostridium botulinum A str. Hall   1 1
No Yes Clostridium botulinum A str. ATCC 19397   1 1
No Yes Carnobacterium maltaromaticum LMA28   1 1
No Yes Melissococcus plutonius ATCC 35311   1 1
No Yes Enterococcus mundtii QU 25   1 1
No Yes Enterococcus casseliflavus EC20   2 2
No Yes Enterococcus faecium Aus0085   1 1
No Yes Enterococcus faecium NRRL B-2354   1 1
No Yes Enterococcus faecium DO   1 1
No Yes Enterococcus faecalis str. Symbioflor 1   1 1
No Yes Enterococcus faecalis D32   1 1
No Yes Enterococcus faecalis OG1RF   1 1
No Yes Enterococcus faecalis V583   1 1
No Yes Leuconostoc carnosum JB16   1 1
No Yes Leuconostoc mesenteroides subsp. mesenteroides J18   2 2
No Yes Leuconostoc gelidum JB7   1 1
No Yes Lactobacillus paracasei subsp. paracasei 8700:2   1 1
No Yes Lactobacillus casei LOCK919   1 1
No Yes Lactobacillus casei W56   1 1
No Yes Lactobacillus casei LC2W   1 1
No Yes Lactobacillus casei BD-II   1 1
No Yes Lactobacillus casei BL23   1 1
No Yes Lactobacillus casei str. Zhang   1 1
No Yes Lactobacillus rhamnosus LOCK908   1 1
No Yes Lactobacillus rhamnosus LOCK900   1 1
No Yes Lactobacillus rhamnosus ATCC 8530   1 1
No Yes Lactobacillus rhamnosus GG   1 1
No Yes Lactobacillus rhamnosus GG   1 1
No Yes Lactobacillus johnsonii N6.2   1 1
No Yes Lactobacillus johnsonii DPC 6026   1 1
No Yes Lactobacillus johnsonii NCC 533   1 1
No Yes Lactobacillus salivarius UCC118   1 1
No Yes Lactobacillus amylovorus GRL 1112   1 1
No Yes Lactobacillus plantarum 16   1 1
No Yes Lactobacillus plantarum ZJ316   1 1
No Yes Lactobacillus plantarum subsp. plantarum ST-III   1 1
No Yes Lactobacillus plantarum subsp. plantarum P-8   1 1
No Yes Lactobacillus plantarum WCFS1   1 1
No Yes Lactobacillus helveticus R0052   1 1
No Yes Lactobacillus helveticus H10   1 1
No Yes Lactobacillus helveticus CNRZ32   1 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus ND02   1 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842   1 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus 2038   1 1
No Yes Lactobacillus brevis KB290   1 1
No Yes Pediococcus pentosaceus SL4   1 1
No Yes Streptococcus constellatus subsp. pharyngis C1050   1 1
No Yes Streptococcus constellatus subsp. pharyngis C818   1 1
No Yes Streptococcus constellatus subsp. pharyngis C232   1 1
No Yes Streptococcus intermedius B196   1 1
No Yes Streptococcus intermedius C270   1 1
No Yes Streptococcus anginosus C238   1 1
No Yes Streptococcus anginosus C1051   1 1
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069   1 1
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC 43143   1 1
No Yes Streptococcus lutetiensis 033   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis ATCC 12394   1 1
No Yes Streptococcus dysgalactiae subsp. equisimilis RE378   1 1
No Yes Streptococcus oligofermentans AS 1.3089   1 1
No Yes Streptococcus parasanguinis FW213   1 1
No Yes Streptococcus pneumoniae A026   1 1
No Yes Streptococcus pneumoniae ST556   1 1
No Yes Streptococcus pneumoniae SPNA45   1 1
No Yes Streptococcus pneumoniae SPN994039   1 1
No Yes Streptococcus pneumoniae SPN994038   1 1
No Yes Streptococcus pneumoniae SPN034183   1 1
No Yes Streptococcus pneumoniae SPN034156   1 1
No Yes Streptococcus pneumoniae INV104   1 1
No Yes Streptococcus pneumoniae INV200   1 1
No Yes Streptococcus pneumoniae OXC141   1 1
No Yes Streptococcus pneumoniae gamPNI0373   1 1
No Yes Streptococcus pneumoniae AP200   1 1
No Yes Streptococcus pneumoniae ATCC 700669   1 1
No Yes Streptococcus pneumoniae TCH8431/19A   1 1
No Yes Streptococcus pneumoniae CGSP14   1 1
No Yes Streptococcus pneumoniae G54   1 1
No Yes Streptococcus pneumoniae JJA   1 1
No Yes Streptococcus pneumoniae 70585   1 1
No Yes Streptococcus pneumoniae Hungary19A-6   1 1
No Yes Streptococcus pneumoniae Taiwan19F-14   1 1
No Yes Streptococcus pneumoniae D39   1 1
No Yes Streptococcus pneumoniae 670-6B   1 1
No Yes Streptococcus pneumoniae R6   1 1
No Yes Streptococcus pneumoniae TIGR4   1 1
No Yes Streptococcus agalactiae ILRI112   1 1
No Yes Streptococcus agalactiae ILRI005   1 1
No Yes Streptococcus agalactiae 09mas018883   1 1
No Yes Streptococcus agalactiae 2-22   1 1
No Yes Streptococcus agalactiae SA20-06   1 1
No Yes Streptococcus agalactiae GD201008-001   1 1
No Yes Streptococcus agalactiae NEM316   1 1
No Yes Streptococcus agalactiae 2603V/R   1 1
No Yes Streptococcus mutans GS-5   1 1
No Yes Streptococcus mutans LJ23   1 1
No Yes Streptococcus mutans UA159   1 1
No Yes Streptococcus suis T15   1 1
No Yes Streptococcus suis TL13   1 1
No Yes Streptococcus suis SC070731   1 1
No Yes Streptococcus suis S735   1 1
No Yes Streptococcus suis ST3   1 1
No Yes Streptococcus suis D9   1 1
No Yes Streptococcus suis SS12   1 1
No Yes Streptococcus suis D12   1 1
No Yes Streptococcus suis ST1   1 1
No Yes Streptococcus suis A7   1 1
No Yes Streptococcus suis JS14   1 1
No Yes Streptococcus suis BM407   1 1
No Yes Streptococcus suis SC84   1 1
No Yes Streptococcus suis GZ1   1 1
No Yes Streptococcus suis 98HAH33   2 2
No Yes Streptococcus suis 05ZYH33   1 1
No Yes Streptococcus salivarius CCHSS3   1 1
No Yes Streptococcus salivarius JIM8777   1 1
No Yes Exiguobacterium antarcticum B7   2 2
No Yes Amphibacillus xylanus NBRC 15112   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5113   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   1 1
No Yes Bacillus amyloliquefaciens LFB112   1 1
No Yes Bacillus amyloliquefaciens CC178   1 1
No Yes Bacillus amyloliquefaciens Y2   1 1
No Yes Bacillus amyloliquefaciens IT-45   1 1
No Yes Bacillus amyloliquefaciens XH7   1 1
No Yes Bacillus amyloliquefaciens LL3   1 1
No Yes Bacillus amyloliquefaciens TA208   1 1
No Yes Bacillus amyloliquefaciens DSM 7   1 1
No Yes Bacillus subtilis PY79   1 1
No Yes Bacillus subtilis XF-1   1 1
No Yes Bacillus subtilis QB928   1 1
No Yes Bacillus subtilis BSn5   1 1
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   1 1
No Yes Bacillus subtilis subsp. subtilis str. BSP1   1 1
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   1 1
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   1 1
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   1 1
No Yes Bacillus subtilis subsp. spizizenii str. W23   1 1
No Yes Bacillus subtilis subsp. natto BEST195   1 1
No Yes Bacillus megaterium WSH-002   1 1
No Yes Bacillus megaterium QM B1551   1 1
No Yes Sorangium cellulosum So0157-2   1 1
No Yes Myxococcus stipitatus DSM 14675   1 1
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   1 1
No Yes Methanolobus psychrophilus R15   1 1
No Yes Methanosarcina mazei Tuc01   1 1
No Yes Natrinema pellirubrum DSM 15624   3 3
No Yes Haloquadratum walsbyi C23   1 1
No Yes Halorhabdus tiamatea SARL4B   1 1
No Yes Natronomonas moolapensis 8.8.11   1 1
No Yes Haloarcula hispanica N601   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 18 18
No Yes Homo sapiens (NCBI version) Human 9 9
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 6 6
No Yes Loa loa v3.3 (Request) Eye worm 2 2
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 2 2
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 2 2
No Yes Moniliophthora perniciosa FA553 (Genome survey)   1 1
No Yes Encephalitozoon intestinalis (endoparasite)   1 1
No Yes Encephalitozoon cuniculi (endoparasite)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 5 5
No Yes Lotus japonicus (Early assembly)   24 24
No Yes Malus x domestica (Duplicate) Apple 43 42
No Yes Ricinus communis (Early assembly) Castor bean 22 22
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   56 51
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 30 29
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 31 30
No Yes Phoenix dactylifera (Early draft) Date palm 17 16
No Yes Homo sapiens 69_37 Human 6 6
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 6 6
No Yes Gorilla gorilla 69_3.1 Western gorilla 6 6
No Yes Pongo abelii 69_2 Sumatran orangutan 5 5
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 5 5
No Yes Macaca mulatta 69_1 Rhesus monkey 5 5
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 7 7
No Yes Otolemur garnettii 69_3 Small-eared galago 8 8
No Yes Microcebus murinus 69_1 Gray mouse lemur 5 5
No Yes Rattus norvegicus 69_3.4 Norway rat 5 5
No Yes Mus musculus 69_38 House mouse 8 8
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 5 4
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 6 6
No Yes Cavia porcellus 69_3 Domestic guinea pig 7 7
No Yes Oryctolagus cuniculus 69_2 Rabbit 8 8
No Yes Ochotona princeps 69 American pika 5 5
No Yes Tupaia belangeri 69 Northern tree shrew 4 4
No Yes Sus scrofa 69_10.2 Pig 4 4
No Yes Bos taurus 69_3.1 Cattle 6 6
No Yes Vicugna pacos 69_1 Alpaca 3 3
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 5 5
No Yes Mustela putorius furo 69_1.0 Domestic ferret 7 7
No Yes Ailuropoda melanoleuca 69_1 Giant panda 7 7
No Yes Canis familiaris 69_3.1 Dog 7 7
No Yes Felis catus 69 Domestic cat 6 5
No Yes Equus caballus 69_2 Horse 6 6
No Yes Myotis lucifugus 69_2.0 Little brown bat 6 6
No Yes Pteropus vampyrus 69_1 Large flying fox 5 5
No Yes Sorex araneus 69_1 European shrew 5 4
No Yes Erinaceus europaeus 69 Western European hedgehog 6 5
No Yes Procavia capensis 69_1 Cape rock hyrax 6 5
No Yes Loxodonta africana 69_3 African savanna elephant 8 8
No Yes Echinops telfairi 69 Small Madagascar hedgehog 5 5
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 5 5
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 3 3
No Yes Macropus eugenii 69_1.0 Tammar wallaby 6 6
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 6 6
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 7 7
No Yes Ornithorhynchus anatinus 69_5 Platypus 6 6
No Yes Petromyzon marinus 69_7.0 Sea lamprey 2 2
No Yes Meleagris gallopavo 69_2 Turkey 5 5
No Yes Gallus gallus 69_2 Chicken 5 5
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 4 4
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 8 8
No Yes Anolis carolinensis 69_2.0 Green anole 7 7
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 8 7
No Yes Latimeria chalumnae 69_1 Coelacanth 8 7
No Yes Gadus morhua 69_1 Atlantic cod 8 8
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 10 9
No Yes Takifugu rubripes 69_4 Torafugu 9 8
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 9 8
No Yes Oryzias latipes 69_1 Japanese medaka 7 7
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 9 8
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 9 8
No Yes Danio rerio 69_9 Zebrafish 13 12
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 4 4
No Yes Ciona intestinalis 69 Vase tunicate 3 3
No Yes Drosophila melanogaster 69_5 Fruit fly 4 4
No Yes Caenorhabditis elegans 69_215 Roundworm 5 5
No Yes Arabidopsis thaliana 10 Thale cress 32 32
No Yes 2_050719S (meta-genome)   1 1
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 4_Deep_abyss (meta-genome)   1 1
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   1 1
No Yes Combined (meta-genome)   1 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   3 3
No Yes Dump top (Dump top) (meta-genome)   2 2
No Yes Endophytic microbiome from Rice (meta-genome)   2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   2 2
No Yes Fungus garden combined (combined) (meta-genome)   4 4
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   1 1
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   1 1
No Yes Human Gut Community Subject 7 (meta-genome)   2 2
No Yes Human Gut Community Subject 8 (meta-genome)   1 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   3 3
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   2 2
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   5 5
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   1 1
No Yes NCBI 2017_08 genome   26572 26456
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   2 2
No Yes Protozoadb 2010_08 (Protozoadb)   49 49
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   2 2
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   2 2
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   5 5
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   9 9
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   5 5
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   7 7
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   8 8
No Yes STRING v9.0.5 (STRING)   802 794
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   1 1
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   2 2
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   2 2
No Yes Uniprot 2018_03 genome   11979 11837
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   1 1
No Yes Global Ocean Sampling Expedition (GOS)   28 28
No Yes NCBI plasmid sequences (Plasmids)   2 2
No Yes PDB chains (SCOP 1.75) (PDB)   3 3
No Yes Protein Data Bank (all PDB sequenc)   9 9
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   25 25
No Yes TargetDB (Targets)   49 49

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