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EGF/Laminin superfamily domain assignments
in
Echinococcus granulosus

Assignment details

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Echinococcus granulosus has 126 significant domains in 38 proteins.

     

Sequence ID   Evalue   Region   Family  
EgrG_000054270.1   0.000000419   462-510   EGF-type module  
  0.000795   416-446   EGF-type module  
  0.0247   195-225   EGF-type module  
EgrG_000054300.1   0.000000454   518-566   EGF-type module  
  0.000861   472-502   EGF-type module  
  0.0237   250-280   EGF-type module  
EgrG_000056700.1   0.0000642   806-832   EGF-type module  
  0.000726   772-797   Integrin beta EGF-like domains  
  0.00493   838-863   EGF-type module  
  0.0298   742-765   EGF-type module  
EgrG_000059400.1   0.0000706   405-443   EGF-type module  
EgrG_000068100.1   0.0000000000628   374-418   EGF-type module  
  0.000000332   338-382   EGF-type module  
  0.0000469   292-338   EGF-type module  
  0.0485   1565-1600   EGF-type module  
EgrG_000090400.1   0.000000342   290-333   EGF-type module  
EgrG_000111100.1   0.000000000963   262-318   EGF-type module  
  0.0000061   174-223   EGF-type module  
  0.0714   217-269   EGF-type module  
EgrG_000208200.1   0.000000000328   711-748   EGF-type module  
  0.000000000578   631-674   EGF-type module  
  0.00000000839   670-714   EGF-type module  
  0.0000000802   461-502   EGF-type module  
  0.000000249   500-541   EGF-type module  
  0.000000516   751-794   EGF-type module  
  0.000000559   991-1034   EGF-type module  
  0.00000399   80-118   EGF-type module  
  0.0000042   42-80   EGF-type module  
  0.0000136   546-573   Integrin beta EGF-like domains  
  0.0000168   905-954   EGF-type module  
  0.0000226   373-414   EGF-type module  
  0.0000782   958-989   EGF-type module  
  0.000205   851-894   EGF-type module  
  0.000514   414-461   EGF-type module  
  0.0578   587-635   EGF-type module  
EgrG_000252100.1   0.000000419   293-327   EGF-type module  
  0.0000806   237-285   EGF-type module  
  0.0419   200-240   EGF-type module  
EgrG_000321100.1   0.0000704   448-486   EGF-type module  
  0.000335   347-386   EGF-type module  
  0.0711   310-344   EGF-type module  
EgrG_000338500.1   0.00000531   110-147   EGF-type module  
  0.000437   70-105   EGF-type module  
EgrG_000343000.1   0.0000193   1908-1944   EGF-type module  
  0.0000331   1239-1275   EGF-type module  
  0.0000796   1537-1574   EGF-type module  
  0.0000838   1648-1684   EGF-type module  
  0.000172   1835-1872   EGF-type module  
  0.000223   1685-1721   EGF-type module  
  0.00023   1573-1611   EGF-type module  
  0.000243   1760-1794   EGF-type module  
  0.000314   1871-1908   EGF-type module  
  0.000352   1278-1314   EGF-type module  
  0.00036   1611-1647   EGF-type module  
  0.000411   1315-1351   EGF-type module  
  0.000419   1984-2019   EGF-type module  
  0.000503   1353-1388   EGF-type module  
  0.000605   2238-2278   EGF-type module  
  0.000629   1463-1499   EGF-type module  
  0.00105   1389-1425   EGF-type module  
  0.00159   1722-1758   EGF-type module  
  0.00176   1426-1462   EGF-type module  
  0.00235   1501-1536   EGF-type module  
  0.00461   1946-1982   EGF-type module  
EgrG_000373600.1   0.0000000128   95-133   EGF-type module  
  0.0000000244   233-276   EGF-type module  
  0.00000055   135-171   EGF-type module  
  0.0000254   46-99   EGF-type module  
  0.00727   212-236   EGF-type module  
EgrG_000458400.1   0.00000000156   348-398   Laminin-type module  
  0.00000000474   536-589   Laminin-type module  
  0.0000000391   641-685   Laminin-type module  
  0.0000000558   711-765   Laminin-type module  
  0.000000363   241-298   Laminin-type module  
  0.000000446   587-641   Laminin-type module  
  0.000000474   768-814   Laminin-type module  
  0.0000023   179-243   Laminin-type module  
  0.00000273   298-350   Laminin-type module  
  0.00181   817-863   Laminin-type module  
  0.0156   495-538   EGF-type module  
EgrG_000465800.1   0.000000000109   435-472   EGF-type module  
  0.000000242   311-358   EGF-type module  
  0.00000203   393-440   EGF-type module  
  0.00000402   355-401   EGF-type module  
  0.00419   274-315   EGF-type module  
  0.0312   240-269   EGF-type module  
EgrG_000524400.1   0.00000369   189-239   EGF-type module  
EgrG_000527100.1   0.0000213   296-341   EGF-type module  
  0.000216   339-382   EGF-type module  
  0.00377   259-301   EGF-type module  
  0.0711   190-226   Laminin-type module  
  0.0988   224-254   EGF-type module  
EgrG_000550700.1   0.0000305   822-864   EGF-type module  
EgrG_000638000.1   0.00000000014   375-446   Laminin-type module  
  0.000000046   507-560   Laminin-type module  
  0.0000000544   444-495   Laminin-type module  
  0.0000000642   570-612   Laminin-type module  
EgrG_000640700.1   0.00000000000439   805-847   EGF-type module  
  0.000000000439   957-1000   EGF-type module  
EgrG_000660400.1   0.0000419   2418-2458   EGF-type module  
EgrG_000744300.1   0.0000000000586   811-853   EGF-type module  
  0.00000000183   849-887   EGF-type module  
  0.0000000127   492-526   EGF-type module  
  0.0000000606   734-769   EGF-type module  
  0.0000000921   453-490   EGF-type module  
  0.000000129   774-815   EGF-type module  
  0.000000317   299-337   EGF-type module  
  0.00000156   684-726   EGF-type module  
  0.00000162   529-575   EGF-type module  
  0.00000218   371-409   EGF-type module  
  0.00000429   645-683   EGF-type module  
  0.0000162   608-646   EGF-type module  
  0.0000166   333-375   EGF-type module  
  0.0000699   411-458   EGF-type module  
  0.021   259-296   EGF-type module  
EgrG_000753300.1   0.0000000114   202-245   EGF-type module  
EgrG_000824500.1   0.00000225   4468-4509   EGF-type module  
  0.00000839   4534-4573   EGF-type module  
  0.0000123   4604-4638   EGF-type module  
  0.0000444   4414-4470   EGF-type module  
  0.000508   4093-4134   EGF-type module  
EgrG_000846900.1   0.0000000475   256-302   EGF-type module  
  0.00000103   336-369   EGF-type module  
  0.00578   217-245   EGF-type module  
EgrG_000847000.1   0.0000000699   213-248   EGF-type module  
  0.00000109   156-203   EGF-type module  
EgrG_000851300.1   0.0000000839   387-425   EGF-type module  
  0.0000104   295-328   EGF-type module  
  0.0000271   244-287   EGF-type module  
  0.0000765   330-376   EGF-type module  
  0.000116   206-248   EGF-type module  
EgrG_000851400.1   0.000000202   326-367   EGF-type module  
  0.000000233   236-274   EGF-type module  
  0.0000401   275-316   EGF-type module  
EgrG_000880000.1   0.00000000134   811-860   Laminin-type module  
  0.0000000184   717-758   Laminin-type module  
  0.0000000335   335-400   Laminin-type module  
  0.0000000642   765-813   Laminin-type module  
  0.0000000893   868-916   Laminin-type module  
  0.000000307   458-500   Laminin-type module  
  0.000000307   1016-1057   Laminin-type module  
  0.000000307   914-963   Laminin-type module  
  0.00000046   271-337   Laminin-type module  
  0.00000179   509-548   Laminin-type module  
  0.00000204   1066-1113   Laminin-type module  
  0.00000558   415-460   Laminin-type module  
  0.00000558   964-1013   Laminin-type module  
EgrG_000895400.1   0.0000233   459-501   EGF-type module  
  0.0000474   318-361   EGF-type module  
EgrG_000898050.1   0.0000000745   412-451   EGF-type module  
  0.00807   334-357   EGF-type module  
EgrG_000961100.1   0.000000000666   925-963   EGF-type module  
  0.00000136   884-929   EGF-type module  
  0.000524   1352-1405   EGF-type module  
  0.037   1095-1123   EGF-type module  
EgrG_000997200.1   0.0000000478   834-871   EGF-type module  
  0.000000173   610-646   EGF-type module  
  0.000000198   1374-1418   EGF-type module  
  0.000285   1342-1380   EGF-type module  
  0.00387   225-251   EGF-type module  
  0.00401   263-295   EGF-type module  
  0.00463   586-609   EGF-type module  
  0.00809   811-834   EGF-type module  
  0.0165   1068-1100   EGF-type module  
EgrG_001054000.1   0.00000000128   197-243   EGF-type module  
  0.00015   108-132   EGF-type module  
EgrG_001102200.1   0.0000754   422-456   EGF-type module  
EgrG_001132400.1   0.00000000114   1259-1309   Laminin-type module  
  0.0000000187   1687-1736   Laminin-type module  
  0.0000000586   855-907   Laminin-type module  
  0.00000067   282-330   Laminin-type module  
  0.000000949   1742-1792   Laminin-type module  
  0.00000363   1065-1119   Laminin-type module  
  0.00000474   1320-1362   Laminin-type module  
  0.00000921   336-392   Laminin-type module  
  0.0000106   1165-1211   Laminin-type module  
  0.0000363   936-973   Laminin-type module  
  0.0000502   1018-1059   Laminin-type module  
  0.0000753   428-465   Laminin-type module  
  0.000114   1124-1167   Laminin-type module  
  0.000781   796-825   Laminin-type module  
  0.00201   1210-1256   Laminin-type module  
  0.0112   980-1020   Laminin-type module  
EgrG_001164200.1   0.00000000128   325-363   EGF-type module  
  0.00000000307   246-293   EGF-type module  
  0.00814   209-238   EGF-type module  
EgrG_002003800.1   0.00000000146   197-236   EGF-type module  
  0.00144   142-191   EGF-type module  
  0.00769   105-140   EGF-type module  
 
Weak hits:
EgrG_000096200.1   0.000108   152-191   EGF-type module  
EgrG_000185800.1   0.0497   9-29   EGF-type module  
EgrG_000216000.1   0.001   374-411   EGF-type module  
  0.00712   216-248   EGF-type module  
  0.0109   241-291   EGF-type module  
EgrG_000223300.1   0.0011   644-696   EGF-type module  
EgrG_000347500.1   0.00251   781-809   EGF-type module  
EgrG_000455000.1   0.0015   254-295   EGF-type module  
  0.00838   147-185   EGF-type module  
  0.0196   104-153   EGF-type module  
EgrG_000487000.1   0.000201   227-274   EGF-type module  
  0.00553   347-377   EGF-type module  
EgrG_000514500.1   0.000597   23-68   EGF-type module  
EgrG_000528400.1   0.0012   607-633   Integrin beta EGF-like domains  
  0.0024   520-550   Integrin beta EGF-like domains  
  0.0243   549-592   Integrin beta EGF-like domains  
  0.0276   476-502   Integrin beta EGF-like domains  
EgrG_000813700.1   0.00443   598-625   EGF-type module  
  0.0598   1183-1206   EGF-type module  
EgrG_000825000.1   0.000902   142-190   EGF-type module  
  0.0322   63-85   Integrin beta EGF-like domains  
EgrG_001047600.1   0.00474   1049-1088   EGF-type module  
EgrG_001196600.1   0.000279   83-135   EGF-type module  
EgrG_001196700.1   0.00046   61-113   EGF-type module  

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Select to display   Genome       Domains   Proteins
No Yes ALL   719145 719145
No Yes Homo sapiens 76_38 Human 1736 621
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 532 163
No Yes Gorilla gorilla 76_3.1 Western gorilla 876 233
No Yes Pongo abelii 76_2 Sumatran orangutan 539 174
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 555 171
No Yes Papio anubis 76 Olive baboon 634 191
No Yes Macaca mulatta 76_1 Rhesus monkey 925 318
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 1183 386
No Yes Otolemur garnettii 76_3 Small-eared galago 551 171
No Yes Microcebus murinus 76_1 Gray mouse lemur 455 139
No Yes Rattus norvegicus 76_5.0 Norway rat 613 207
No Yes Mus musculus 76_38 House mouse 1015 344
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 515 145
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 529 164
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 521 161
No Yes Cavia porcellus 76_3 Domestic guinea pig 580 173
No Yes Oryctolagus cuniculus 76_2 Rabbit 478 160
No Yes Ochotona princeps 76 American pika 469 142
No Yes Tupaia belangeri 76 Northern tree shrew 407 132
No Yes Sus scrofa 76_10.2 Pig 585 211
No Yes Bos taurus 76_3.1 Cattle 632 189
No Yes Ovis aries 76_3.1 Sheep 602 193
No Yes Vicugna pacos 76_1 Alpaca 260 102
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 526 156
No Yes Mustela putorius furo 76_1.0 Domestic ferret 583 186
No Yes Ailuropoda melanoleuca 76_1 Giant panda 634 192
No Yes Canis familiaris 76_3.1 Dog 761 226
No Yes Felis catus 76_6.2 Domestic cat 592 185
No Yes Equus caballus 76_2 Horse 806 230
No Yes Myotis lucifugus 76_2.0 Little brown bat 502 169
No Yes Pteropus vampyrus 76_1 Large flying fox 529 164
No Yes Sorex araneus 76_1 European shrew 286 102
No Yes Erinaceus europaeus 76 Western European hedgehog 383 118
No Yes Procavia capensis 76_1 Cape rock hyrax 460 149
No Yes Loxodonta africana 76_3 African savanna elephant 690 216
No Yes Echinops telfairi 76 Small Madagascar hedgehog 391 135
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 616 199
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 271 99
No Yes Macropus eugenii 76_1.0 Tammar wallaby 454 139
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 621 199
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 616 176
No Yes Ornithorhynchus anatinus 76_5 Platypus 511 184
No Yes Saccoglossus kowalevskii v3.0   3261 466
No Yes Petromyzon marinus 76_7.0 Sea lamprey 221 94
No Yes Meleagris gallopavo 76_2 Turkey 509 175
No Yes Gallus gallus 76_4 Chicken 523 155
No Yes Anas platyrhynchos 76_1.0 Mallard 519 172
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 513 170
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 533 157
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 592 196
No Yes Anolis carolinensis 76_2.0 Green anole 539 160
No Yes Xenopus laevis African clawed frog 514 207
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 694 186
No Yes Latimeria chalumnae 76_1 Coelacanth 738 218
No Yes Lepisosteus oculatus 76 Spotted gar 888 241
No Yes Gadus morhua 76_1 Atlantic cod 618 198
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 995 299
No Yes Takifugu rubripes 76_4 Torafugu 2323 723
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 771 242
No Yes Oryzias latipes 76_1 Japanese medaka 740 228
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 627 196
No Yes Poecilia formosa 76 Amazon molly 687 203
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 1051 282
No Yes Astyanax mexicanus 76 Mexican tetra 752 239
No Yes Danio rerio 76_9 Zebrafish 1139 389
No Yes Oikopleura dioica   459 149
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 1671 332
No Yes Ciona intestinalis 76 Vase tunicate 438 155
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 2661 612
No Yes Adineta vaga   1146 278
No Yes Octopus bimaculoides 280   748 217
No Yes Crassostrea gigas 22 Pacific oyster 874 287
No Yes Lottia gigantea Owl limpet 627 164
No Yes Helobdella robusta   407 130
No Yes Capitella sp. I   916 309
No Yes Danaus plexippus OGS1.0 Monarch butterfly 197 52
No Yes Heliconius melpomene Postman butterfly 184 46
No Yes Bombyx mori Domestic silkworm 149 65
No Yes Nasonia vitripennis Jewel wasp 168 39
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 745 159
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 213 49
No Yes Linepithema humile v1.1 Argentine ant 160 66
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 182 59
No Yes Solenopsis invicta v.2.2.3 Red fire ant 111 54
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 220 46
No Yes Atta cephalotes v1.1   189 65
No Yes Camponotus floridanus v3.3 Florida carpenter ant 206 46
No Yes Lucilia cuprina Australian sheep blowfly 189 47
No Yes Drosophila grimshawi 1.3   235 55
No Yes Drosophila willistoni 1.3   203 47
No Yes Drosophila pseudoobscura 2.13   219 52
No Yes Drosophila persimilis 1.3   189 52
No Yes Drosophila suzukii   233 53
No Yes Drosophila yakuba 1.3   214 47
No Yes Drosophila simulans 1.3   145 43
No Yes Drosophila sechellia 1.3   187 41
No Yes Drosophila melanogaster 76_5 Fruit fly 696 152
No Yes Drosophila erecta 1.3   215 44
No Yes Drosophila ananassae 1.3   210 48
No Yes Drosophila virilis 1.2   216 49
No Yes Drosophila mojavensis 1.3   212 46
No Yes Megaselia scalaris 22   77 32
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 222 54
No Yes Culex pipiens quinquefasciatus Southern house mosquito 204 55
No Yes Anopheles darlingi 22 American malaria mosquito 125 29
No Yes Anopheles gambiae 49_3j African malaria mosquito 196 51
No Yes Tribolium castaneum 3.0 Red flour beetle 229 58
No Yes Pediculus humanus corporis (Early assembly) Human body louse 220 55
No Yes Acyrthosiphon pisum Pea aphid 185 35
No Yes Rhodnius prolixus 22   183 44
No Yes Daphnia pulex Common water flea 256 74
No Yes Strigamia maritima 22   230 60
No Yes Sarcoptes scabiei   166 48
No Yes Tetranychus urticae Two-spotted spider mite 224 64
No Yes Ixodes scapularis (Preliminary) Black-legged tick 156 55
No Yes Pristionchus pacificus   229 96
No Yes Meloidogyne incognita Southern root-knot nematode 119 42
No Yes Meloidogyne hapla   76 37
No Yes Onchocerca volvulus 22   185 53
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 433 107
No Yes Caenorhabditis japonica   193 64
No Yes Caenorhabditis brenneri   302 105
No Yes Caenorhabditis remanei   276 100
No Yes Caenorhabditis elegans 76_235 Roundworm 528 152
No Yes Caenorhabditis briggsae 2   242 82
No Yes Trichinella spiralis 22   313 92
No Yes Hymenolepis microstoma   122 36
No Yes Echinococcus multilocularis   133 38
No Yes Echinococcus granulosus   126 38
No Yes Taenia solium Pork tapeworm 127 41
No Yes Schistosoma mansoni   123 45
No Yes Mnemiopsis leidyi Sea walnut 178 50
No Yes Thelohanellus kitauei   26 25
No Yes Acropora digitifera v1.0   831 347
No Yes Nematostella vectensis 1.0 Starlet sea anemone 1039 372
No Yes Hydra vulgaris   350 115
No Yes Amphimedon queenslandica   433 151
No Yes Trichoplax adhaerens   574 125
No Yes Proterospongia sp. ATCC 50818   129 59
No Yes Monosiga brevicollis   53 30
No Yes Sphaeroforma arctica JP610   120 34
No Yes Capsaspora owczarzaki ATCC 30864   28 22
No Yes Amorphotheca resinae v1.0 Creosote fungus 1 1
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Trichophyton verrucosum HKI 0517   1 1
No Yes Arthroderma benhamiae CBS 112371   1 1
No Yes Trichophyton tonsurans CBS 112818   1 1
No Yes Trichophyton rubrum CBS 118892   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Yarrowia lipolytica CLIB122   1 1
No Yes Spizellomyces punctatus DAOM BR117   1 1
No Yes Dictyostelium discoideum   19 9
No Yes Dictyostelium purpureum   9 6
No Yes Pinus taeda Loblolly pine 1 1
No Yes Picea abies Norway spruce 1 1
No Yes Eucalyptus grandis v201 Rose gum 17 17
No Yes Theobroma cacao B97-61/B2 v1 Cacao 6 6
No Yes Gossypium raimondii v221   17 17
No Yes Citrus clementina v165   4 4
No Yes Citrus sinensis v154 Sweet orange 10 10
No Yes Thellungiella halophila v173   3 3
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 11 11
No Yes Capsella rubella v183   6 6
No Yes Arabidopsis lyrata Lyrate rockcress 4 4
No Yes Arabidopsis thaliana 10 Thale cress 5 5
No Yes Carica papaya Papaya 4 4
No Yes Medicago truncatula Barrel medic 18 18
No Yes Phaseolus vulgaris v186 French bean 8 8
No Yes Glycine max v109 Soybean 12 12
No Yes Cucumis sativus v122 Cucumber 6 5
No Yes Fragaria vesca Wild strawberry 15 13
No Yes Malus domestica v196 Apple 25 25
No Yes Prunus persica v139 Peach 11 11
No Yes Linum usitatissimum v200 Flax 1 1
No Yes Populus trichocarpa v156 Black cottonwood 10 10
No Yes Vitis vinifera Wine grape 19 12
No Yes Mimulus guttatus v140 Spotted monkey flower 2 2
No Yes Solanum lycopersicum v.2.3 Tomato 6 6
No Yes Solanum tuberosum Potato 20 20
No Yes Actinidia chinensis Hongyang   5 5
No Yes Aquilegia coerulea v195   14 14
No Yes Triticum urartu 22   42 42
No Yes Triticum aestivum 22 Bread wheat 122 122
No Yes Aegilops tauschii 22   64 64
No Yes Brachypodium distachyon Stiff brome 26 25
No Yes Oryza barthii 22 African wild rice 59 49
No Yes Oryza meridionalis 22   53 44
No Yes Oryza glumaepatula 22   66 64
No Yes Oryza glaberrima African rice 31 31
No Yes Oryza punctata 22   44 41
No Yes Oryza nivara 22   56 52
No Yes Oryza brachyantha 22 Malo sina 38 38
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 50 49
No Yes Oryza sativa v193 Rice 51 50
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 16 16
No Yes Panicum virgatum v202 Switchgrass 77 76
No Yes Setaria italica v164 Foxtail millet 40 40
No Yes Zea mays subsp. mays Maize 18 17
No Yes Zea mays v181 Maize 20 19
No Yes Sorghum bicolor Sorghum 26 26
No Yes Musa balbisiana Balbis banana 14 13
No Yes Musa acuminata 22 Wild Malaysian banana 29 26
No Yes Amborella trichopoda 22   4 4
No Yes Physcomitrella patens   2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   4 4
No Yes Asterochloris sp. Cgr/DA1pho v1.0   2 2
No Yes Chlorella variabilis sp. NC64A   7 6
No Yes Chlorella vulgaris   5 5
No Yes Volvox carteri f. nagariensis   2 2
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   5 5
No Yes Ostreococcus lucimarinus CCE9901   4 4
No Yes Ostreococcus tauri   2 2
No Yes Bathycoccus prasinos   4 4
No Yes Micromonas sp. RCC299   3 2
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   18 12
No Yes Giardia lamblia 2.3   26 14
No Yes Cyanophora paradoxa   4 4
No Yes Ectocarpus siliculosus   10 9
No Yes Albugo laibachii 22   3 3
No Yes Pythium iwayamai DAOM BR242034 22   4 4
No Yes Pythium arrhenomanes ATCC 12531 22   7 6
No Yes Pythium ultimum v1.7-2   2 2
No Yes Pythium aphanidermatum DAOM BR444 22   5 4
No Yes Pythium irregulare DAOM BR486 22   2 2
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 3 3
No Yes Phaeodactylum tricornutumCCAP 1055/1   6 4
No Yes Fragilariopsis cylindrus   14 10
No Yes Thalassiosira pseudonana CCMP1335   6 4
No Yes Perkinsus marinus ATCC 50983   3 3
No Yes Paramecium tetraurelia   10 10
No Yes Tetrahymena thermophila SB210 1   4 4
No Yes Ichthyophthirius multifiliis strain G5   1 1
No Yes Cryptosporidium hominis   7 6
No Yes Cryptosporidium muris   13 7
No Yes Cryptosporidium parvum Iowa II   12 7
No Yes Neospora caninum   12 7
No Yes Toxoplasma gondii VEG   12 6
No Yes Toxoplasma gondii ME49   14 8
No Yes Toxoplasma gondii GT1   8 5
No Yes Babesia bovis T2Bo   4 2
No Yes Theileria parva   1 1
No Yes Plasmodium falciparum 3D7   10 7
No Yes Plasmodium vivax SaI-1 7.0   12 8
No Yes Plasmodium knowlesi strain H   13 9
No Yes Plasmodium yoelii ssp. yoelii 1   8 5
No Yes Plasmodium chabaudi   9 6
No Yes Plasmodium berghei ANKA   10 6
No Yes Symbiodinium minutum clade B1 v1.2   10 7
No Yes Naegleria gruberi   15 13
No Yes Guillardia theta CCMP2712 v1.0   24 18
No Yes Emiliania huxleyi CCMP1516   3 3
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Odoribacter splanchnicus DSM 20712   1 1
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Stigmatella aurantiaca DW4/3-1   1 1
No Yes Myxococcus xanthus DK 1622   1 1
No Yes Myxococcus fulvus HW-1   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 774 252
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 393 99
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 218 56
No Yes Ascaris suum Victoria/Ghent Pig roundworm 227 76
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 360 114
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 6 6
No Yes Hordeum vulgare 22 Domesticated barley 56 56
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 42 42
No Yes Neospora caninum Nc-Liverpool 6.2   12 7
No Yes Plasmodium falciparum HB3   9 6
No Yes Plasmodium falciparum Dd2   6 4
No Yes Myxococcus stipitatus DSM 14675   2 2
No Yes Homo sapiens 75_37 (old version GRC) Human 1814 677
No Yes Homo sapiens (NCBI version) Human 877 288
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 556 169
No Yes Heliconius numata (Incomplete)   14 9
No Yes Loa loa v3.3 (Request) Eye worm 185 61
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 186 80
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 169 51
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Lotus japonicus (Early assembly)   3 3
No Yes Malus x domestica (Duplicate) Apple 25 25
No Yes Ricinus communis (Early assembly) Castor bean 5 5
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   4 4
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 6 6
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 6 6
No Yes Phoenix dactylifera (Early draft) Date palm 4 4
No Yes Homo sapiens 69_37 Human 710 195
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 517 157
No Yes Gorilla gorilla 69_3.1 Western gorilla 571 161
No Yes Pongo abelii 69_2 Sumatran orangutan 519 168
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 495 156
No Yes Macaca mulatta 69_1 Rhesus monkey 556 172
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 578 165
No Yes Otolemur garnettii 69_3 Small-eared galago 549 170
No Yes Microcebus murinus 69_1 Gray mouse lemur 455 139
No Yes Rattus norvegicus 69_3.4 Norway rat 574 173
No Yes Mus musculus 69_38 House mouse 554 169
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 513 143
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 502 156
No Yes Cavia porcellus 69_3 Domestic guinea pig 558 163
No Yes Oryctolagus cuniculus 69_2 Rabbit 463 150
No Yes Ochotona princeps 69 American pika 469 142
No Yes Tupaia belangeri 69 Northern tree shrew 407 132
No Yes Sus scrofa 69_10.2 Pig 467 164
No Yes Bos taurus 69_3.1 Cattle 558 165
No Yes Vicugna pacos 69_1 Alpaca 260 102
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 526 156
No Yes Mustela putorius furo 69_1.0 Domestic ferret 565 183
No Yes Ailuropoda melanoleuca 69_1 Giant panda 551 166
No Yes Canis familiaris 69_3.1 Dog 552 165
No Yes Felis catus 69 Domestic cat 380 133
No Yes Equus caballus 69_2 Horse 546 178
No Yes Myotis lucifugus 69_2.0 Little brown bat 472 160
No Yes Pteropus vampyrus 69_1 Large flying fox 525 162
No Yes Sorex araneus 69_1 European shrew 286 102
No Yes Erinaceus europaeus 69 Western European hedgehog 383 118
No Yes Procavia capensis 69_1 Cape rock hyrax 458 148
No Yes Loxodonta africana 69_3 African savanna elephant 526 165
No Yes Echinops telfairi 69 Small Madagascar hedgehog 391 135
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 322 125
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 267 97
No Yes Macropus eugenii 69_1.0 Tammar wallaby 454 139
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 491 158
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 567 166
No Yes Ornithorhynchus anatinus 69_5 Platypus 452 168
No Yes Petromyzon marinus 69_7.0 Sea lamprey 203 84
No Yes Meleagris gallopavo 69_2 Turkey 471 152
No Yes Gallus gallus 69_2 Chicken 516 150
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 494 162
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 497 161
No Yes Anolis carolinensis 69_2.0 Green anole 510 157
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 553 156
No Yes Latimeria chalumnae 69_1 Coelacanth 639 183
No Yes Gadus morhua 69_1 Atlantic cod 547 170
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 693 221
No Yes Takifugu rubripes 69_4 Torafugu 677 202
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 659 191
No Yes Oryzias latipes 69_1 Japanese medaka 656 187
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 627 196
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 749 202
No Yes Danio rerio 69_9 Zebrafish 769 240
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 523 112
No Yes Ciona intestinalis 69 Vase tunicate 408 143
No Yes Drosophila melanogaster 69_5 Fruit fly 218 50
No Yes Caenorhabditis elegans 69_215 Roundworm 241 74
No Yes Arabidopsis thaliana 10 Thale cress 5 5
No Yes 1_050719N (meta-genome)   1 1
No Yes 3_Below_base_of_euphotic (meta-genome)   2 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   1 1
No Yes Combined (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   2 2
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   2 2
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   2 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   2 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   2 2
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   1 1
No Yes NCBI 2017_08 genome   302166 90591
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   242 149
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   13 7
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   6 3
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   6 3
No Yes STRING v9.0.5 (STRING)   25827 7909
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   2 1
No Yes Uniprot 2018_03 genome   214533 69342
No Yes Global Ocean Sampling Expedition (GOS)   425 226
No Yes NCBI viral sequences (Viral)   27 26
No Yes PDB chains (SCOP 1.75) (PDB)   117 88
No Yes Protein Data Bank (all PDB sequenc)   1179 857
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   2437 2434
No Yes TargetDB (Targets)   486 191
No Yes UniProt viral sequences (Viral)   82 69

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