SUPERFAMILY 1.75 HMM library and genome assignments server

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MPP-like family domain assignments
in
PDB chains (SCOP 1.75)

Assignment details

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PDB chains (SCOP 1.75) (PDB) has 38 significant domains in 17 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
1bccA   3.19e-65   0.0000754   14-217   1bcc A:4-232  
  1.52e-39   0.0000304   237-437   1bcc A:233-445  
1ezvA   6.85e-35   0.0000000287   2-210   1ezv A:27-239  
  5.71e-32   0.0000000678   215-421   1ezv A:240-456  
1hr6A   1.16e-42   0.000000011   6-216   1hr6 A:14-233  
  2.68e-41   0.00000000498   222-446   1hr6 A:234-470  
1hr6B   5.28e-74   0.000000666   8-211   1hr6 B:24-245  
  1.25e-41   0.000000105   237-436   1hr6 B:246-462  
1hr7B   3.39e-71   0.000000871   8-211   1hr6 B:24-245  
  1.25e-41   0.000000105   237-436   1hr6 B:246-462  
  1.19e-37   0.0000692   237-437   1be3 A:234-446  
1q2lA   4.53e-66   0.000000000585   242-479   1q2l A:264-503  
  2.09e-62   0.00000001   17-234   1q2l A:24-263  
  1.45e-48   0.00000000131   481-705   1q2l A:504-732  
  7.47e-45   0.0000000011   712-934   1q2l A:733-960  
  8.66e-38   0.0000692   237-437   1be3 A:234-446  
  1.41e-37   0.0000692   271-471   1be3 A:234-446  
2fgeA   1.49e-75   0.000000000208   540-796   2fge A:540-797  
  5.14e-65   0.000000000184   273-538   2fge A:272-539  
  5.18e-50   0.000000000283   21-265   2fge A:15-271  
  4.48e-33   0.0000000247   798-966   2fge A:798-993  
3cx5A   8.9e-35   0.0000000287   2-211   1ezv A:27-239  
  5.71e-32   0.0000000678   216-422   1ezv A:240-456  
3cx5B   2.49e-37   0.000000181   205-352   1ezv B:219-368  
  1.69e-30   0.0000000337   1-197   1ezv B:17-218  
 
Weak hits:
1bccB   1.69e-38   0.00026   5-207   1bcc B:18-235  
  3.83e-38   0.00028   219-363,392-422   1bcc B:236-439  
1ppjA   4.38e-66   0.00012   14-217   1be3 A:1-233  
1ppjB   2.09e-39   0.00016   22-224   1be3 B:21-235  
  9.2e-39   0.0003   236-380,409-439   1be3 B:236-439  
1qcrA   4.38e-66   0.00012   14-217   1be3 A:1-233  
1qcrB   1.89e-39   0.00016   6-208   1be3 B:21-235  
  8.43e-39   0.0003   220-364,393-423   1be3 B:236-439  
1sqbA   5.18e-66   0.00012   48-251   1be3 A:1-233  
1sqbB   2.29e-39   0.00016   36-238   1be3 B:21-235  
  9.58e-39   0.0003   250-394,423-453   1be3 B:236-439  
2bccB   1.69e-38   0.00026   5-207   1bcc B:18-235  
  3.83e-38   0.00028   219-363,392-422   1bcc B:236-439  

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Select to display   Genome       Domains   Proteins
No Yes ALL   195323 195323
No Yes Homo sapiens 76_38 Human 33 23
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 12 8
No Yes Gorilla gorilla 76_3.1 Western gorilla 15 9
No Yes Pongo abelii 76_2 Sumatran orangutan 12 7
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 12 8
No Yes Papio anubis 76 Olive baboon 13 8
No Yes Macaca mulatta 76_1 Rhesus monkey 23 15
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 29 19
No Yes Otolemur garnettii 76_3 Small-eared galago 19 11
No Yes Microcebus murinus 76_1 Gray mouse lemur 8 5
No Yes Rattus norvegicus 76_5.0 Norway rat 14 9
No Yes Mus musculus 76_38 House mouse 15 11
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 3 3
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 12 7
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 13 8
No Yes Cavia porcellus 76_3 Domestic guinea pig 14 8
No Yes Oryctolagus cuniculus 76_2 Rabbit 14 8
No Yes Ochotona princeps 76 American pika 9 6
No Yes Tupaia belangeri 76 Northern tree shrew 10 7
No Yes Sus scrofa 76_10.2 Pig 14 9
No Yes Bos taurus 76_3.1 Cattle 11 7
No Yes Ovis aries 76_3.1 Sheep 12 8
No Yes Vicugna pacos 76_1 Alpaca 9 6
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 12 7
No Yes Mustela putorius furo 76_1.0 Domestic ferret 10 7
No Yes Ailuropoda melanoleuca 76_1 Giant panda 12 8
No Yes Canis familiaris 76_3.1 Dog 13 9
No Yes Felis catus 76_6.2 Domestic cat 11 7
No Yes Equus caballus 76_2 Horse 12 7
No Yes Myotis lucifugus 76_2.0 Little brown bat 13 8
No Yes Pteropus vampyrus 76_1 Large flying fox 11 7
No Yes Sorex araneus 76_1 European shrew 7 5
No Yes Erinaceus europaeus 76 Western European hedgehog 10 5
No Yes Procavia capensis 76_1 Cape rock hyrax 10 6
No Yes Loxodonta africana 76_3 African savanna elephant 15 9
No Yes Echinops telfairi 76 Small Madagascar hedgehog 10 6
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 12 7
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 8 5
No Yes Macropus eugenii 76_1.0 Tammar wallaby 9 6
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 15 9
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 12 7
No Yes Ornithorhynchus anatinus 76_5 Platypus 16 11
No Yes Saccoglossus kowalevskii v3.0   15 9
No Yes Petromyzon marinus 76_7.0 Sea lamprey 7 5
No Yes Meleagris gallopavo 76_2 Turkey 13 9
No Yes Gallus gallus 76_4 Chicken 12 7
No Yes Anas platyrhynchos 76_1.0 Mallard 13 8
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 12 7
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 12 7
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 12 8
No Yes Anolis carolinensis 76_2.0 Green anole 13 8
No Yes Xenopus laevis African clawed frog 36 18
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 15 9
No Yes Latimeria chalumnae 76_1 Coelacanth 13 9
No Yes Lepisosteus oculatus 76 Spotted gar 14 9
No Yes Gadus morhua 76_1 Atlantic cod 13 8
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 16 11
No Yes Takifugu rubripes 76_4 Torafugu 31 19
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 29 16
No Yes Oryzias latipes 76_1 Japanese medaka 21 13
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 9 6
No Yes Poecilia formosa 76 Amazon molly 14 10
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 20 12
No Yes Astyanax mexicanus 76 Mexican tetra 14 9
No Yes Danio rerio 76_9 Zebrafish 17 11
No Yes Oikopleura dioica   2 2
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 14 11
No Yes Ciona intestinalis 76 Vase tunicate 8 5
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 10 8
No Yes Adineta vaga   22 15
No Yes Octopus bimaculoides 280   15 12
No Yes Crassostrea gigas 22 Pacific oyster 7 5
No Yes Lottia gigantea Owl limpet 9 6
No Yes Helobdella robusta   10 6
No Yes Capitella sp. I   9 7
No Yes Danaus plexippus OGS1.0 Monarch butterfly 8 7
No Yes Heliconius melpomene Postman butterfly 13 9
No Yes Bombyx mori Domestic silkworm 7 4
No Yes Nasonia vitripennis Jewel wasp 10 7
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 23 17
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 10 7
No Yes Linepithema humile v1.1 Argentine ant 10 6
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 13 10
No Yes Solenopsis invicta v.2.2.3 Red fire ant 8 5
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 10 8
No Yes Atta cephalotes v1.1   9 7
No Yes Camponotus floridanus v3.3 Florida carpenter ant 9 6
No Yes Lucilia cuprina Australian sheep blowfly 8 5
No Yes Drosophila grimshawi 1.3   11 9
No Yes Drosophila willistoni 1.3   10 7
No Yes Drosophila pseudoobscura 2.13   16 12
No Yes Drosophila persimilis 1.3   12 9
No Yes Drosophila suzukii   10 7
No Yes Drosophila yakuba 1.3   9 7
No Yes Drosophila simulans 1.3   8 6
No Yes Drosophila sechellia 1.3   9 7
No Yes Drosophila melanogaster 76_5 Fruit fly 14 11
No Yes Drosophila erecta 1.3   9 7
No Yes Drosophila ananassae 1.3   10 6
No Yes Drosophila virilis 1.2   8 7
No Yes Drosophila mojavensis 1.3   10 8
No Yes Megaselia scalaris 22   7 4
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 14 11
No Yes Culex pipiens quinquefasciatus Southern house mosquito 8 6
No Yes Anopheles darlingi 22 American malaria mosquito 12 8
No Yes Anopheles gambiae 49_3j African malaria mosquito 12 8
No Yes Tribolium castaneum 3.0 Red flour beetle 9 6
No Yes Pediculus humanus corporis (Early assembly) Human body louse 8 6
No Yes Acyrthosiphon pisum Pea aphid 11 6
No Yes Rhodnius prolixus 22   9 6
No Yes Daphnia pulex Common water flea 9 6
No Yes Strigamia maritima 22   13 8
No Yes Sarcoptes scabiei   10 6
No Yes Tetranychus urticae Two-spotted spider mite 8 6
No Yes Ixodes scapularis (Preliminary) Black-legged tick 6 4
No Yes Pristionchus pacificus   5 5
No Yes Meloidogyne incognita Southern root-knot nematode 5 3
No Yes Meloidogyne hapla   2 2
No Yes Onchocerca volvulus 22   7 4
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 7 4
No Yes Caenorhabditis japonica   7 6
No Yes Caenorhabditis brenneri   9 5
No Yes Caenorhabditis remanei   8 5
No Yes Caenorhabditis elegans 76_235 Roundworm 20 13
No Yes Caenorhabditis briggsae 2   8 5
No Yes Trichinella spiralis 22   3 3
No Yes Hymenolepis microstoma   7 5
No Yes Echinococcus multilocularis   9 7
No Yes Echinococcus granulosus   8 6
No Yes Taenia solium Pork tapeworm 9 7
No Yes Schistosoma mansoni   10 7
No Yes Mnemiopsis leidyi Sea walnut 8 6
No Yes Thelohanellus kitauei   1 1
No Yes Acropora digitifera v1.0   7 7
No Yes Nematostella vectensis 1.0 Starlet sea anemone 10 6
No Yes Hydra vulgaris   6 5
No Yes Amphimedon queenslandica   14 11
No Yes Trichoplax adhaerens   9 5
No Yes Proterospongia sp. ATCC 50818   7 6
No Yes Monosiga brevicollis   6 5
No Yes Sphaeroforma arctica JP610   10 6
No Yes Capsaspora owczarzaki ATCC 30864   10 7
No Yes Conidiobolus coronatus NRRL28638 v1.0   6 3
No Yes Mortierella verticillata NRRL 6337   9 7
No Yes Phycomyces blakesleeanus   13 8
No Yes Rhizopus oryzae RA 99-880   13 8
No Yes Mucor circinelloides   11 7
No Yes Rhizomucor miehei CAU432   13 8
No Yes Malassezia globosa CBS 7966   12 8
No Yes Sporisorium reilianum 22   6 4
No Yes Ustilago maydis   6 4
No Yes Mixia osmundae IAM 14324 v1.0   6 4
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   6 4
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   6 4
No Yes Melampsora laricis-populina   6 4
No Yes Rhodotorula graminis WP1 v1.0   6 4
No Yes Sporobolomyces roseus IAM 13481   7 5
No Yes Microbotryum violaceum 22   7 5
No Yes Wallemia sebi v1.0   6 4
No Yes Sphaerobolus stellatus v1.0   7 6
No Yes Piloderma croceum F 1598 v1.0   6 4
No Yes Serpula lacrymans var. lacrymans S7.9   7 5
No Yes Coniophora puteana   6 4
No Yes Hydnomerulius pinastri v2.0   7 5
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   6 4
No Yes Pisolithus microcarpus 441 v1.0   6 4
No Yes Pisolithus tinctorius Marx 270 v1.0   6 4
No Yes Scleroderma citrinum Foug A v1.0   6 4
No Yes Coprinopsis cinerea okayama7 130 v3   6 4
No Yes Pleurotus ostreatus Oyster mushroom 6 4
No Yes Amanita thiersii Skay4041 v1.0   6 4
No Yes Amanita muscaria Koide v1.0 Fly agaric 6 4
No Yes Galerina marginata v1.0   6 4
No Yes Hebeloma cylindrosporum h7 v2.0   6 4
No Yes Laccaria bicolor S238N-H82   6 4
No Yes Agaricus bisporus var. bisporus   8 5
No Yes Schizophyllum commune   6 4
No Yes Stereum hirsutum FP-91666 SS1 v1.0   6 4
No Yes Heterobasidion annosum   5 3
No Yes Gloeophyllum trabeumv1.0   6 4
No Yes Punctularia strigosozonata v1.0   6 4
No Yes Sebacina vermifera MAFF 305830 v1.0   11 8
No Yes Fomitiporia mediterranea v1.0   19 17
No Yes Tulasnella calospora AL13/4D v1.0   6 4
No Yes Postia placenta   9 6
No Yes Wolfiporia cocos MD-104 SS10 v1.0   8 6
No Yes Fomitopsis pinicolav1.0   7 5
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   7 5
No Yes Phanerochaete chrysosporium RP-78 2.1   7 5
No Yes Dichomitus squalens   6 4
No Yes Trametes versicolor v1.0   7 5
No Yes Tremella mesenterica Witches' butter 6 4
No Yes Daldinia eschscholzii EC12 v1.0   7 4
No Yes Apiospora montagnei NRRL 25634 v1.0   8 5
No Yes Magnaporthe poae ATCC 64411 22   8 5
No Yes Magnaporthe grisea 70-15   8 5
No Yes Podospora anserina   8 5
No Yes Sporotrichum thermophile ATCC 42464   9 5
No Yes Thielavia terrestris NRRL 8126   6 3
No Yes Chaetomium globosum CBS 148.51   7 4
No Yes Neurospora tetrasperma   10 5
No Yes Neurospora discreta FGSC 8579   9 5
No Yes Neurospora crassa OR74A   10 5
No Yes Cryphonectria parasitica Chestnut blight fungus 8 4
No Yes Verticillium albo-atrum VaMs.102   7 4
No Yes Verticillium dahliae VdLs.17   8 5
No Yes Acremonium alcalophilumv 1.0   8 5
No Yes Glomerella graminicola 22   8 4
No Yes Fusarium graminearum   7 4
No Yes Nectria haematococca mpVI   9 5
No Yes Fusarium oxysporum f. sp. lycopersici 4286   11 8
No Yes Fusarium verticillioides 7600   9 5
No Yes Trichoderma asperellum CBS 433.97 v1.0   8 4
No Yes Trichoderma atroviride   7 4
No Yes Trichoderma citrinoviride v1.0   8 5
No Yes Trichoderma reesei 1.2   8 4
No Yes Trichoderma virens Gv29-8   7 4
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   6 3
No Yes Trichoderma harzianum CBS 226.95 v1.0   7 4
No Yes Amorphotheca resinae v1.0 Creosote fungus 9 5
No Yes Botrytis cinerea B05.10   6 4
No Yes Sclerotinia sclerotiorum   7 5
No Yes Blumeria graminis 22   7 5
No Yes Didymella exigua CBS 183.55 v1.0   8 5
No Yes Leptosphaeria maculans 22   7 4
No Yes Setosphaeria turcica v1.0   7 4
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   8 5
No Yes Cochliobolus victoriae FI3 v1.0   7 4
No Yes Cochliobolus carbonum 26-R-13 v1.0   7 4
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 7 4
No Yes Alternaria brassicicola   6 4
No Yes Cochliobolus lunatus m118 v2.0   8 5
No Yes Pyrenophora teres f. teres 22   8 5
No Yes Pyrenophora tritici-repentis   8 5
No Yes Stagonospora nodorum   7 5
No Yes Mycosphaerella graminicola IPO323   6 4
No Yes Zasmidium cellare ATCC 36951 v1.0   6 4
No Yes Dothistroma septosporum   6 4
No Yes Septoria musiva v1.0   7 5
No Yes Mycosphaerella fijiensis CIRAD86   6 4
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   8 5
No Yes Paracoccidioides brasiliensis Pb18   6 5
No Yes Coccidioides posadasii RMSCC 3488   7 5
No Yes Coccidioides immitis RS   7 5
No Yes Ajellomyces dermatitidis SLH14081   6 5
No Yes Histoplasma capsulatum class NAmI strain WU24   7 6
No Yes Microsporum canis CBS 113480   7 5
No Yes Trichophyton equinum CBS 127.97   7 5
No Yes Trichophyton verrucosum HKI 0517   7 5
No Yes Arthroderma benhamiae CBS 112371   7 5
No Yes Trichophyton tonsurans CBS 112818   7 5
No Yes Trichophyton rubrum CBS 118892   7 5
No Yes Uncinocarpus reesii 1704   7 5
No Yes Aspergillus zonatus v1.0   8 5
No Yes Penicillium chrysogenum Wisconsin 54-1255   7 5
No Yes Penicillium chrysogenum v1.0   7 5
No Yes Aspergillus acidus v1.0   6 4
No Yes Aspergillus fumigatus Af293   7 5
No Yes Aspergillus brasiliensis v1.0   7 5
No Yes Aspergillus nidulans FGSC A4   6 4
No Yes Aspergillus sydowii v1.0   7 5
No Yes Aspergillus versicolor v1.0   7 5
No Yes Aspergillus glaucus   6 4
No Yes Aspergillus carbonarius ITEM 5010   6 4
No Yes Neosartorya fischeri NRRL 181   7 5
No Yes Aspergillus terreus NIH2624   6 4
No Yes Aspergillus tubingensis v1.0   7 5
No Yes Aspergillus wentii v1.0   7 5
No Yes Aspergillus oryzae RIB40   7 5
No Yes Aspergillus niger 22   7 5
No Yes Aspergillus niger ATCC 1015   5 4
No Yes Aspergillus flavus NRRL3357   6 4
No Yes Aspergillus clavatus NRRL 1   6 4
No Yes Penicillium marneffei ATCC 18224   7 4
No Yes Tuber melanosporum Mel28 22   7 5
No Yes Tuber melanosporum Vittad Perigord truffle 7 5
No Yes Hansenula polymorpha v2.0   8 6
No Yes Dekkera bruxellensis CBS 2499 v2.0   8 6
No Yes Pichia membranifaciensv1.0   9 6
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   9 6
No Yes Candida dubliniensis CD36   8 6
No Yes Candida tropicalis MYA-3404   10 8
No Yes Candida parapsilosis   9 6
No Yes Candida albicans SC5314   9 6
No Yes Lodderomyces elongisporus NRRL YB-4239   9 6
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   10 7
No Yes Pichia stipitis CBS 6054   9 6
No Yes Candida guilliermondii ATCC 6260   9 6
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   10 7
No Yes Debaromyces hansenii   9 6
No Yes Wickerhamomyces anomalus   10 6
No Yes Pichia pastoris GS115   9 6
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   7 4
No Yes Yarrowia lipolytica CLIB122   9 6
No Yes Candida lusitaniae ATCC 42720   9 6
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   9 6
No Yes Vanderwaltozyma polyspora DSM 70294   10 6
No Yes Candida glabrata CBS138   10 6
No Yes Kluyveromyces thermotolerans CBS 6340   11 7
No Yes Lachancea kluyveri   10 6
No Yes Kluyveromyces waltii   11 7
No Yes Ashbya gossypii ATCC 10895   10 6
No Yes Zygosaccharomyces rouxii   11 7
No Yes Saccharomyces mikatae MIT   6 4
No Yes Saccharomyces paradoxus MIT   10 6
No Yes Saccharomyces cerevisiae 76 Baker's yeast 10 6
No Yes Saccharomyces bayanus MIT   9 6
No Yes Kluyveromyces lactis   10 6
No Yes Schizosaccharomyces cryophilus OY26 22   7 5
No Yes Schizosaccharomyces octosporus yFS286   7 5
No Yes Schizosaccharomyces japonicus yFS275   8 5
No Yes Schizosaccharomyces pombe Fission yeast 8 5
No Yes Catenaria anguillulae PL171 v1.0   8 4
No Yes Allomyces macrogynus ATCC 38327   17 10
No Yes Spizellomyces punctatus DAOM BR117   8 5
No Yes Dictyostelium discoideum   6 4
No Yes Dictyostelium purpureum   6 5
No Yes Entamoeba dispar 1.2   1 1
No Yes Entamoeba invadens 1.2   4 4
No Yes Entamoeba histolytica 1   1 1
No Yes Selaginella moellendorffii   24 11
No Yes Pinus taeda Loblolly pine 7 5
No Yes Picea abies Norway spruce 6 4
No Yes Eucalyptus grandis v201 Rose gum 27 20
No Yes Theobroma cacao B97-61/B2 v1 Cacao 12 7
No Yes Gossypium raimondii v221   51 29
No Yes Citrus clementina v165   25 15
No Yes Citrus sinensis v154 Sweet orange 46 22
No Yes Thellungiella halophila v173   19 9
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 33 16
No Yes Capsella rubella v183   21 11
No Yes Arabidopsis lyrata Lyrate rockcress 22 12
No Yes Arabidopsis thaliana 10 Thale cress 35 15
No Yes Carica papaya Papaya 11 5
No Yes Medicago truncatula Barrel medic 14 8
No Yes Phaseolus vulgaris v186 French bean 16 8
No Yes Glycine max v109 Soybean 25 12
No Yes Cucumis sativus v122 Cucumber 18 9
No Yes Fragaria vesca Wild strawberry 14 8
No Yes Malus domestica v196 Apple 37 18
No Yes Prunus persica v139 Peach 17 8
No Yes Linum usitatissimum v200 Flax 36 17
No Yes Manihot esculenta v147 Cassava 17 9
No Yes Populus trichocarpa v156 Black cottonwood 21 10
No Yes Vitis vinifera Wine grape 16 9
No Yes Mimulus guttatus v140 Spotted monkey flower 18 9
No Yes Solanum lycopersicum v.2.3 Tomato 14 7
No Yes Solanum tuberosum Potato 11 5
No Yes Actinidia chinensis Hongyang   15 7
No Yes Aquilegia coerulea v195   48 22
No Yes Triticum urartu 22   12 7
No Yes Triticum aestivum 22 Bread wheat 43 26
No Yes Aegilops tauschii 22   15 8
No Yes Brachypodium distachyon Stiff brome 22 13
No Yes Oryza barthii 22 African wild rice 24 13
No Yes Oryza meridionalis 22   23 13
No Yes Oryza glumaepatula 22   33 17
No Yes Oryza glaberrima African rice 16 8
No Yes Oryza punctata 22   23 11
No Yes Oryza nivara 22   23 13
No Yes Oryza brachyantha 22 Malo sina 18 10
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 25 15
No Yes Oryza sativa v193 Rice 25 15
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 25 14
No Yes Panicum virgatum v202 Switchgrass 33 18
No Yes Setaria italica v164 Foxtail millet 36 18
No Yes Zea mays subsp. mays Maize 24 18
No Yes Zea mays v181 Maize 34 24
No Yes Sorghum bicolor Sorghum 14 8
No Yes Musa balbisiana Balbis banana 17 8
No Yes Musa acuminata 22 Wild Malaysian banana 21 11
No Yes Amborella trichopoda 22   14 8
No Yes Physcomitrella patens   20 12
No Yes Coccomyxa subellipsoidea sp. C-169 v2   10 5
No Yes Asterochloris sp. Cgr/DA1pho v1.0   9 4
No Yes Chlorella variabilis sp. NC64A   10 5
No Yes Chlorella vulgaris   10 5
No Yes Volvox carteri f. nagariensis   9 5
No Yes Volvox carteri v199   9 5
No Yes Chlamydomonas reinhardtii 4.0   6 4
No Yes Ostreococcus sp. RCC809   11 5
No Yes Ostreococcus lucimarinus CCE9901   10 4
No Yes Ostreococcus tauri   9 4
No Yes Bathycoccus prasinos   10 4
No Yes Micromonas sp. RCC299   10 4
No Yes Micromonas pusilla CCMP1545 v3.0   11 5
No Yes Cyanidioschyzon merolae strain 10D 22   8 4
No Yes Cyanidioschyzon merolae   8 4
No Yes Porphyridium purpureum 02_2012   8 4
No Yes Thecamonas trahens ATCC 50062   7 6
No Yes Bigelowiella natans CCMP2755 22   13 9
No Yes Giardia lamblia 2.3   2 2
No Yes Cyanophora paradoxa   6 5
No Yes Leishmania mexicana 2.4   3 3
No Yes Leishmania major strain Friedlin   4 4
No Yes Leishmania infantum JPCM5 2.4   4 4
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   3 3
No Yes Trypanosoma vivax   5 5
No Yes Trypanosoma cruzi strain CL Brener   3 3
No Yes Trypanosoma congolense 2.4   7 7
No Yes Trypanosoma brucei gambiense v4.1   5 5
No Yes Trypanosoma brucei TREU927 v4.1   5 5
No Yes Ectocarpus siliculosus   11 9
No Yes Aureococcus anophagefferens   11 7
No Yes Albugo laibachii 22   11 8
No Yes Pythium iwayamai DAOM BR242034 22   10 7
No Yes Pythium arrhenomanes ATCC 12531 22   9 7
No Yes Pythium ultimum v1.7-2   8 6
No Yes Pythium aphanidermatum DAOM BR444 22   8 6
No Yes Pythium irregulare DAOM BR486 22   8 6
No Yes Pythium vexans DAOM BR484 22   11 8
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 9 7
No Yes Phytophthora sojae 1.1   7 6
No Yes Phytophthora infestans T30-4   9 7
No Yes Phytophthora capsici   8 6
No Yes Hyaloperonospora arabidopsidis 22   9 6
No Yes Phaeodactylum tricornutumCCAP 1055/1   11 7
No Yes Fragilariopsis cylindrus   27 16
No Yes Thalassiosira pseudonana CCMP1335   16 8
No Yes Perkinsus marinus ATCC 50983   10 9
No Yes Paramecium tetraurelia   17 17
No Yes Tetrahymena thermophila SB210 1   12 11
No Yes Ichthyophthirius multifiliis strain G5   9 9
No Yes Cryptosporidium hominis   4 4
No Yes Cryptosporidium muris   8 6
No Yes Cryptosporidium parvum Iowa II   7 7
No Yes Neospora caninum   10 5
No Yes Toxoplasma gondii VEG   11 6
No Yes Toxoplasma gondii ME49   11 6
No Yes Toxoplasma gondii GT1   11 6
No Yes Babesia bovis T2Bo   14 6
No Yes Theileria parva   7 4
No Yes Theileria annulata   8 4
No Yes Plasmodium falciparum 3D7   6 3
No Yes Plasmodium vivax SaI-1 7.0   5 3
No Yes Plasmodium knowlesi strain H   5 3
No Yes Plasmodium yoelii ssp. yoelii 1   6 3
No Yes Plasmodium chabaudi   6 3
No Yes Plasmodium berghei ANKA   6 3
No Yes Symbiodinium minutum clade B1 v1.2   14 11
No Yes Naegleria gruberi   7 6
No Yes Trichomonas vaginalis   10 7
No Yes Guillardia theta CCMP2712 v1.0   12 7
No Yes Emiliania huxleyi CCMP1516   25 14
No Yes Thermobaculum terrenum ATCC BAA-798   1 1
No Yes Leptolyngbya sp. PCC 7376   1 1
No Yes Pseudanabaena sp. PCC 7367   1 1
No Yes Acaryochloris marina MBIC11017   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Synechococcus elongatus PCC 7942   1 1
No Yes Microcoleus sp. PCC 7113   1 1
No Yes Trichodesmium erythraeum IMS101   3 2
No Yes Geitlerinema sp. PCC 7407   2 2
No Yes Cyanothece sp. PCC 8802   1 1
No Yes Gloeocapsa sp. PCC 7428   1 1
No Yes Microcystis aeruginosa NIES-843   1 1
No Yes Rivularia sp. PCC 7116   1 1
No Yes Calothrix sp. PCC 7507   1 1
No Yes Anabaena variabilis ATCC 29413   1 1
No Yes 'Nostoc azollae' 0708   1 1
No Yes Nostoc sp. PCC 7107   1 1
No Yes Nostoc punctiforme PCC 73102   1 1
No Yes Nostoc sp. PCC 7120   1 1
No Yes Nostoc sp. PCC 7524   1 1
No Yes Anabaena sp. 90   1 1
No Yes Conexibacter woesei DSM 14684   2 2
No Yes Cryptobacterium curtum DSM 15641   2 1
No Yes Eggerthella sp. YY7918   2 1
No Yes Eggerthella lenta DSM 2243   2 1
No Yes Slackia heliotrinireducens DSM 20476   2 1
No Yes Olsenella uli DSM 7084   2 1
No Yes Atopobium parvulum DSM 20469   2 1
No Yes Coriobacterium glomerans PW2   1 1
No Yes Rubrobacter xylanophilus DSM 9941   1 1
No Yes Thermobispora bispora DSM 43833   1 1
No Yes Nakamurella multipartita DSM 44233   1 1
No Yes Acidothermus cellulolyticus 11B   1 1
No Yes Modestobacter marinus   1 1
No Yes Blastococcus saxobsidens DD2   1 1
No Yes Geodermatophilus obscurus DSM 43160   1 1
No Yes Kineococcus radiotolerans SRS30216   1 1
No Yes Catenulispora acidiphila DSM 44928   1 1
No Yes Stackebrandtia nassauensis DSM 44728   1 1
No Yes Frankia symbiont of Datisca glomerata   1 1
No Yes Frankia sp. EAN1pec   1 1
No Yes Frankia alni ACN14a   1 1
No Yes Thermobifida fusca YX   1 1
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   1 1
No Yes Thermomonospora curvata DSM 43183   1 1
No Yes Streptosporangium roseum DSM 43021   1 1
No Yes Kitasatospora setae KM-6054   1 1
No Yes Streptomyces coelicolor A3(2)   1 1
No Yes Streptomyces sp. PAMC26508   1 1
No Yes Streptomyces flavogriseus ATCC 33331   1 1
No Yes Streptomyces sp. SirexAA-E   1 1
No Yes Streptomyces griseus subsp. griseus NBRC 13350   1 1
No Yes Streptomyces bingchenggensis BCW-1   1 1
No Yes Streptomyces violaceusniger Tu 4113   1 1
No Yes Streptomyces avermitilis MA-4680   1 1
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces scabiei 87.22   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   1 1
No Yes Actinosynnema mirum DSM 43827   1 1
No Yes Saccharomonospora viridis DSM 43017   1 1
No Yes Pseudonocardia dioxanivorans CB1190   1 1
No Yes Saccharopolyspora erythraea NRRL 2338   1 1
No Yes Amycolatopsis mediterranei U32   1 1
No Yes Kribbella flavida DSM 17836   1 1
No Yes Nocardioides sp. JS614   1 1
No Yes Microlunatus phosphovorus NM-1   1 1
No Yes Salinispora arenicola CNS-205   1 1
No Yes Salinispora tropica CNB-440   1 1
No Yes Verrucosispora maris AB-18-032   1 1
No Yes Micromonospora sp. L5   1 1
No Yes Micromonospora aurantiaca ATCC 27029   1 1
No Yes Actinoplanes sp. N902-109   1 1
No Yes Actinoplanes sp. SE50/110   1 1
No Yes Actinoplanes missouriensis 431   1 1
No Yes Tsukamurella paurometabola DSM 20162   1 1
No Yes Rhodococcus jostii RHA1   1 1
No Yes Rhodococcus equi 103S   1 1
No Yes Rhodococcus opacus B4   1 1
No Yes Rhodococcus erythropolis PR4   1 1
No Yes Nocardia cyriacigeorgica GUH-2   1 1
No Yes Nocardia farcinica IFM 10152   1 1
No Yes Amycolicicoccus subflavus DQS3-9A1   1 1
No Yes Mycobacterium massiliense str. GO 06   1 1
No Yes Mycobacterium abscessus ATCC 19977   1 1
No Yes Mycobacterium sp. JLS   1 1
No Yes Mycobacterium intracellulare ATCC 13950   1 1
No Yes Mycobacterium avium 104   1 1
No Yes Mycobacterium vanbaalenii PYR-1   1 1
No Yes Mycobacterium canettii CIPT 140010059   1 1
No Yes Mycobacterium africanum GM041182   1 1
No Yes Mycobacterium tuberculosis KZN 1435   1 1
No Yes Mycobacterium tuberculosis   1 1
No Yes Mycobacterium bovis BCG str. Pasteur 1173P2   1 1
No Yes Mycobacterium rhodesiae NBB3   1 1
No Yes Mycobacterium gilvum PYR-GCK   1 1
No Yes Mycobacterium chubuense NBB4   1 1
No Yes Mycobacterium marinum M   1 1
No Yes Mycobacterium smegmatis str. MC2 155   1 1
No Yes Mycobacterium leprae Br4923   1 1
No Yes Sanguibacter keddieii DSM 10542   1 1
No Yes Beutenbergia cavernae DSM 12333   1 1
No Yes Leifsonia xyli subsp. xyli str. CTCB07   1 1
No Yes Clavibacter michiganensis subsp. michiganensis NCPPB 382   1 1
No Yes Jonesia denitrificans DSM 20603   1 1
No Yes Brachybacterium faecium DSM 4810   1 1
No Yes Isoptericola variabilis 225   1 1
No Yes Xylanimonas cellulosilytica DSM 15894   1 1
No Yes Cellulomonas flavigena DSM 20109   1 1
No Yes Cellulomonas fimi ATCC 484   1 1
No Yes [Cellvibrio] gilvus ATCC 13127   1 1
No Yes Arthrobacter phenanthrenivorans Sphe3   1 1
No Yes Arthrobacter chlorophenolicus A6   1 1
No Yes Arthrobacter aurescens TC1   1 1
No Yes Arthrobacter arilaitensis Re117   1 1
No Yes Kocuria rhizophila DC2201   1 1
No Yes Rothia mucilaginosa DY-18   1 1
No Yes Rothia dentocariosa ATCC 17931   1 1
No Yes Arthrobacter sp. Rue61a   1 1
No Yes Arthrobacter sp. FB24   1 1
No Yes Renibacterium salmoninarum ATCC 33209   1 1
No Yes Micrococcus luteus NCTC 2665   1 1
No Yes Mobiluncus curtisii ATCC 43063   1 1
No Yes Actinomyces sp. F0330   1 1
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270   4 1
No Yes Dehalococcoides ethenogenes 195   1 1
No Yes Dehalococcoides sp. BAV1   1 1
No Yes Dehalogenimonas lykanthroporepellens BL-DC-9   1 1
No Yes Anaerolinea thermophila UNI-1   4 1
No Yes Thermomicrobium roseum DSM 5159   1 1
No Yes Sphaerobacter thermophilus DSM 20745   1 1
No Yes Herpetosiphon aurantiacus DSM 785   1 1
No Yes Roseiflexus sp. RS-1   5 2
No Yes Roseiflexus castenholzii DSM 13941   5 2
No Yes Chloroflexus sp. MS-G   5 2
No Yes Chloroflexus sp. Y-400-fl   5 2
No Yes Chloroflexus aggregans DSM 9485   5 2
No Yes Chloroflexus aurantiacus J-10-fl   5 2
No Yes Truepera radiovictrix DSM 17093   1 1
No Yes Deinococcus gobiensis I-0   2 1
No Yes Deinococcus deserti VCD115   3 2
No Yes Deinococcus maricopensis DSM 21211   2 1
No Yes Deinococcus geothermalis DSM 11300   3 2
No Yes Deinococcus proteolyticus MRP   3 2
No Yes Deinococcus radiodurans R1   2 1
No Yes Oceanithermus profundus DSM 14977   1 1
No Yes Marinithermus hydrothermalis DSM 14884   1 1
No Yes Meiothermus silvanus DSM 9946   1 1
No Yes Meiothermus ruber DSM 1279   1 1
No Yes Thermus sp. CCB_US3_UF1   1 1
No Yes Thermus scotoductus SA-01   1 1
No Yes Thermus thermophilus HB27   1 1
No Yes Anaerococcus prevotii DSM 20548   1 1
No Yes Finegoldia magna ATCC 29328   1 1
No Yes Veillonella parvula DSM 2008   2 1
No Yes Megasphaera elsdenii DSM 20460   3 1
No Yes Acidaminococcus intestini RyC-MR95   3 1
No Yes Acidaminococcus fermentans DSM 20731   2 1
No Yes Megamonas hypermegale   2 1
No Yes Selenomonas sputigena ATCC 35185   4 1
No Yes Selenomonas ruminantium subsp. lactilytica TAM6421   3 1
No Yes Natranaerobius thermophilus JW/NM-WN-LF   1 1
No Yes Symbiobacterium thermophilum IAM 14863   1 1
No Yes Clostridium clariflavum DSM 19732   1 1
No Yes Clostridium cellulolyticum H10   2 2
No Yes Clostridium thermocellum ATCC 27405   1 1
No Yes Faecalibacterium prausnitzii   1 1
No Yes Ruminococcus sp.   3 1
No Yes Thermaerobacter marianensis DSM 12885   1 1
No Yes butyrate-producing bacterium SS3/4   4 1
No Yes Candidatus Desulforudis audaxviator MP104C   1 1
No Yes Thermincola potens JR   1 1
No Yes Pelotomaculum thermopropionicum SI   1 1
No Yes Desulfosporosinus acidiphilus SJ4   1 1
No Yes Desulfosporosinus orientis DSM 765   1 1
No Yes Dehalobacter sp. DCA   1 1
No Yes Dehalobacter sp. CF   1 1
No Yes Syntrophobotulus glycolicus DSM 8271   1 1
No Yes Desulfitobacterium hafniense Y51   1 1
No Yes Desulfitobacterium dehalogenans ATCC 51507   1 1
No Yes Desulfotomaculum reducens MI-1   1 1
No Yes Desulfotomaculum acetoxidans DSM 771   1 1
No Yes Desulfotomaculum kuznetsovii DSM 6115   1 1
No Yes Desulfotomaculum carboxydivorans CO-1-SRB   1 1
No Yes Desulfotomaculum ruminis DSM 2154   1 1
No Yes Acetobacterium woodii DSM 1030   4 1
No Yes Eubacterium eligens ATCC 27750   4 1
No Yes Eubacterium limosum KIST612   3 1
No Yes Clostridium difficile 630   1 1
No Yes Clostridium saccharolyticum WM1   4 1
No Yes Clostridium phytofermentans ISDg   4 2
No Yes Clostridium lentocellum DSM 5427   7 4
No Yes [Ruminococcus] obeum   4 1
No Yes [Ruminococcus] torques   4 1
No Yes Eubacterium rectale M104/1   4 1
No Yes Eubacterium rectale ATCC 33656   4 1
No Yes Roseburia hominis A2-183   2 1
No Yes Roseburia intestinalis   3 1
No Yes Butyrivibrio proteoclasticus B316   4 1
No Yes Syntrophothermus lipocalidus DSM 12680   1 1
No Yes Syntrophomonas wolfei subsp. wolfei str. Goettingen   1 1
No Yes Heliobacterium modesticaldum Ice1   1 1
No Yes Alkaliphilus oremlandii OhILAs   5 2
No Yes Alkaliphilus metalliredigens QYMF   8 3
No Yes Candidatus Arthromitus sp. SFB-mouse-Japan   1 1
No Yes Clostridium sp. BNL1100   2 2
No Yes Clostridium novyi NT   8 3
No Yes Clostridium ljungdahlii DSM 13528   8 4
No Yes Clostridium kluyveri DSM 555   7 4
No Yes Clostridium beijerinckii NCIMB 8052   2 2
No Yes Clostridium tetani E88   6 3
No Yes Clostridium perfringens ATCC 13124   5 2
No Yes Clostridium cellulovorans 743B   6 3
No Yes Clostridium botulinum A str. ATCC 3502   6 3
No Yes Clostridium acetobutylicum ATCC 824   7 3
No Yes Mahella australiensis 50-1 BON   1 1
No Yes Caldicellulosiruptor obsidiansis OB47   1 1
No Yes Caldicellulosiruptor kronotskyensis 2002   1 1
No Yes Caldicellulosiruptor hydrothermalis 108   1 1
No Yes Caldicellulosiruptor owensensis OL   1 1
No Yes Caldicellulosiruptor lactoaceticus 6A   1 1
No Yes Caldicellulosiruptor kristjanssonii 177R1B   1 1
No Yes Caldicellulosiruptor saccharolyticus DSM 8903   1 1
No Yes Caldicellulosiruptor bescii DSM 6725   1 1
No Yes Thermoanaerobacterium xylanolyticum LX-11   1 1
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571   1 1
No Yes Thermoanaerobacter tengcongensis MB4   1 1
No Yes Carboxydothermus hydrogenoformans Z-2901   1 1
No Yes Moorella thermoacetica ATCC 39073   1 1
No Yes Ammonifex degensii KC4   1 1
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   1 1
No Yes Thermoanaerobacter pseudethanolicus ATCC 33223   1 1
No Yes Thermoanaerobacter sp. X514   1 1
No Yes Thermoanaerobacter italicus Ab9   1 1
No Yes Thermoanaerobacter wiegelii Rt8.B1   1 1
No Yes Thermoanaerobacter brockii subsp. finnii Ako-1   1 1
No Yes Carnobacterium sp. 17-4   2 1
No Yes Aerococcus urinae ACS-120-V-Col10a   1 1
No Yes Exiguobacterium sp. MH3   1 1
No Yes Exiguobacterium sp. AT1b   1 1
No Yes Exiguobacterium sibiricum 255-15   1 1
No Yes Kyrpidia tusciae DSM 2912   1 1
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446   1 1
No Yes Brevibacillus brevis NBRC 100599   1 1
No Yes Paenibacillus sp. JDR-2   1 1
No Yes Paenibacillus terrae HPL-003   1 1
No Yes Paenibacillus mucilaginosus 3016   1 1
No Yes Paenibacillus polymyxa M1   1 1
No Yes Bacillus selenitireducens MLS10   1 1
No Yes Solibacillus silvestris StLB046   1 1
No Yes Geobacillus thermoglucosidasius C56-YS93   1 1
No Yes Lysinibacillus sphaericus C3-41   1 1
No Yes Oceanobacillus iheyensis HTE831   1 1
No Yes Anoxybacillus flavithermus WK1   1 1
No Yes Geobacillus thermoleovorans CCB_US3_UF5   1 1
No Yes Geobacillus kaustophilus HTA426   1 1
No Yes Geobacillus sp. GHH01   1 1
No Yes Geobacillus sp. WCH70   1 1
No Yes Geobacillus thermodenitrificans NG80-2   1 1
No Yes Bacillus sp. JS   1 1
No Yes Bacillus sp. 1NLA3E   1 1
No Yes Bacillus amyloliquefaciens FZB42   1 1
No Yes Bacillus atrophaeus 1942   1 1
No Yes Bacillus subtilis subsp. subtilis str. 168   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus halodurans C-125   1 1
No Yes Bacillus weihenstephanensis KBAB4   1 1
No Yes Bacillus thuringiensis str. Al Hakam   1 1
No Yes Bacillus cereus 03BB102   1 1
No Yes Bacillus anthracis str. A0248   1 1
No Yes Bacillus pseudofirmus OF4   1 1
No Yes Bacillus clausii KSM-K16   1 1
No Yes Bacillus cellulosilyticus DSM 2522   1 1
No Yes Bacillus pumilus SAFR-032   1 1
No Yes Bacillus megaterium DSM 319   1 1
No Yes Bacillus coagulans 2-6   1 1
No Yes Macrococcus caseolyticus JCSC5402   1 1
No Yes Candidatus Cloacamonas acidaminovorans   4 1
No Yes Gemmatimonas aurantiaca T-27   1 1
No Yes Melioribacter roseus P3M   1 1
No Yes Ignavibacterium album JCM 16511   1 1
No Yes Pelodictyon phaeoclathratiforme BU-1   1 1
No Yes Chlorobium luteolum DSM 273   1 1
No Yes Chlorobium chlorochromatii CaD3   1 1
No Yes Chlorobium phaeobacteroides DSM 266   1 1
No Yes Chlorobium phaeovibrioides DSM 265   1 1
No Yes Chlorobium limicola DSM 245   1 1
No Yes Chlorobaculum parvum NCIB 8327   1 1
No Yes Chlorobium tepidum TLS   1 1
No Yes Chloroherpeton thalassium ATCC 35110   1 1
No Yes Prosthecochloris aestuarii DSM 271   1 1
No Yes Rhodothermus marinus DSM 4252   1 1
No Yes Flexibacter litoralis DSM 6794   2 2
No Yes Belliella baltica DSM 15883   1 1
No Yes Cyclobacterium marinum DSM 745   1 1
No Yes Marivirga tractuosa DSM 4126   1 1
No Yes Fibrella aestuarina   1 1
No Yes Leadbetterella byssophila DSM 17132   1 1
No Yes Dyadobacter fermentans DSM 18053   1 1
No Yes Cytophaga hutchinsonii ATCC 33406   1 1
No Yes Spirosoma linguale DSM 74   1 1
No Yes Runella slithyformis DSM 19594   1 1
No Yes Parabacteroides distasonis ATCC 8503   1 1
No Yes Tannerella forsythia ATCC 43037   1 1
No Yes Paludibacter propionicigenes WB4   1 1
No Yes Odoribacter splanchnicus DSM 20712   1 1
No Yes Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2   1 1
No Yes Bacteroides sp. CF50   1 1
No Yes Prevotella melaninogenica ATCC 25845   1 1
No Yes Prevotella intermedia 17   1 1
No Yes Prevotella denticola F0289   1 1
No Yes Prevotella ruminicola 23   1 1
No Yes Porphyromonas asaccharolytica DSM 20707   1 1
No Yes Alistipes finegoldii DSM 17242   1 1
No Yes Bacteroides salanitronis DSM 18170   1 1
No Yes Bacteroides helcogenes P 36-108   1 1
No Yes Bacteroides vulgatus ATCC 8482   1 1
No Yes Bacteroides thetaiotaomicron VPI-5482   1 1
No Yes Bacteroides fragilis YCH46   1 1
No Yes Pedobacter saltans DSM 12145   1 1
No Yes Solitalea canadensis DSM 3403   1 1
No Yes Pedobacter heparinus DSM 2366   1 1
No Yes Sphingobacterium sp. 21   1 1
No Yes Fluviicola taffensis DSM 16823   1 1
No Yes Owenweeksia hongkongensis DSM 17368   1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   1 1
No Yes Waddlia chondrophila WSU 86-1044   4 2
No Yes Candidatus Protochlamydia amoebophila UWE25   1 1
No Yes Parachlamydia acanthamoebae UV-7   3 2
No Yes Simkania negevensis Z   3 2
No Yes Chlamydophila pecorum E58   3 2
No Yes Chlamydia muridarum Nigg   4 2
No Yes Chlamydophila pneumoniae TW-183   3 2
No Yes Chlamydophila caviae GPIC   3 2
No Yes Chlamydophila felis Fe/C-56   4 2
No Yes Chlamydophila abortus S26/3   3 2
No Yes Chlamydia psittaci 01DC11   3 2
No Yes Chlamydia trachomatis B/Jali20/OT   4 2
No Yes Phycisphaera mikurensis NBRC 102666   1 1
No Yes Isosphaera pallida ATCC 43644   1 1
No Yes Planctomyces brasiliensis DSM 5305   1 1
No Yes Planctomyces limnophilus DSM 3776   1 1
No Yes Rhodopirellula baltica SH 1   1 1
No Yes Pirellula staleyi DSM 6068   1 1
No Yes Coraliomargarita akajimensis DSM 45221   1 1
No Yes Turneriella parva DSM 21527   1 1
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. L550   1 1
No Yes Leptospira interrogans serovar Lai str. IPAV   1 1
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   1 1
No Yes Brachyspira murdochii DSM 12563   1 1
No Yes Brachyspira intermedia PWS/A   1 1
No Yes Brachyspira pilosicoli 95/1000   1 1
No Yes Brachyspira hyodysenteriae WA1   1 1
No Yes Borrelia garinii PBi   1 1
No Yes Borrelia bissettii DN127   1 1
No Yes Borrelia afzelii PKo   1 1
No Yes Borrelia burgdorferi B31   1 1
No Yes Borrelia recurrentis A1   1 1
No Yes Borrelia duttonii Ly   1 1
No Yes Borrelia crocidurae str. Achema   1 1
No Yes Borrelia turicatae 91E135   1 1
No Yes Borrelia hermsii DAH   1 1
No Yes Spirochaeta smaragdinae DSM 11293   2 1
No Yes Sphaerochaeta pleomorpha str. Grapes   2 1
No Yes Sphaerochaeta globus str. Buddy   2 1
No Yes Sphaerochaeta coccoides DSM 17374   2 1
No Yes Spirochaeta caldaria DSM 7334   3 1
No Yes Treponema azotonutricium ZAS-9   2 1
No Yes Treponema primitia ZAS-2   2 1
No Yes Treponema brennaborense DSM 12168   3 2
No Yes Treponema paraluiscuniculi Cuniculi A   2 1
No Yes Treponema succinifaciens DSM 2489   1 1
No Yes Treponema pallidum subsp. pallidum SS14   4 2
No Yes Treponema denticola ATCC 35405   2 1
No Yes Spirochaeta africana DSM 8902   2 1
No Yes Spirochaeta thermophila DSM 6192   3 1
No Yes Thermodesulfatator indicus DSM 15286   2 2
No Yes Thermodesulfobacterium sp. OPB45   1 1
No Yes Desulfurispirillum indicum S5   2 1
No Yes Calditerrivibrio nitroreducens DSM 19672   1 1
No Yes Denitrovibrio acetiphilus DSM 12809   1 1
No Yes Deferribacter desulfuricans SSM1   1 1
No Yes Flexistipes sinusarabici DSM 4947   1 1
No Yes Kosmotoga olearia TBF 19.5.1   1 1
No Yes Desulfurobacterium thermolithotrophum DSM 11699   1 1
No Yes Thermocrinis albus DSM 14484   1 1
No Yes uncultured Termite group 1 bacterium phylotype Rs-D17   1 1
No Yes Dictyoglomus turgidum DSM 6724   1 1
No Yes Dictyoglomus thermophilum H-6-12   1 1
No Yes Caldisericum exile AZM16c01   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Granulicella tundricola MP5ACTX9   1 1
No Yes Granulicella mallensis MP5ACTX8   1 1
No Yes Candidatus Koribacter versatilis Ellin345   1 1
No Yes Terriglobus saanensis SP1PR4   1 1
No Yes Terriglobus roseus DSM 18391   1 1
No Yes Acidobacterium capsulatum ATCC 51196   1 1
No Yes Thermodesulfovibrio yellowstonii DSM 11347   1 1
No Yes Candidatus Nitrospira defluvii   1 1
No Yes Leptospirillum ferrooxidans C2-3   1 1
No Yes Sebaldella termitidis ATCC 33386   1 1
No Yes Leptotrichia buccalis C-1013-b   1 1
No Yes Ilyobacter polytropus DSM 2926   1 1
No Yes Fusobacterium nucleatum subsp. nucleatum ATCC 25586   1 1
No Yes Candidatus Methylomirabilis oxyfera   1 1
No Yes Acidithiobacillus ferrivorans SS3   1 1
No Yes Acidithiobacillus ferrooxidans ATCC 53993   1 1
No Yes Bacteriovorax marinus SJ   1 1
No Yes Bdellovibrio bacteriovorus HD100   1 1
No Yes Desulfarculus baarsii DSM 2075   2 2
No Yes Desulfobacca acetoxidans DSM 11109   1 1
No Yes Syntrophus aciditrophicus SB   4 1
No Yes Desulfomonile tiedjei DSM 6799   1 1
No Yes Syntrophobacter fumaroxidans MPOB   5 2
No Yes Desulfurivibrio alkaliphilus AHT2   2 2
No Yes Desulfotalea psychrophila LSv54   1 1
No Yes Desulfobulbus propionicus DSM 2032   1 1
No Yes Desulfatibacillum alkenivorans AK-01   3 2
No Yes Desulfobacterium autotrophicum HRM2   2 1
No Yes Desulfococcus oleovorans Hxd3   2 1
No Yes Desulfohalobium retbaense DSM 5692   5 2
No Yes Desulfomicrobium baculatum DSM 4028   6 2
No Yes Desulfovibrio piezophilus   5 2
No Yes Desulfovibrio aespoeensis Aspo-2   5 2
No Yes Lawsonia intracellularis PHE/MN1-00   5 2
No Yes Desulfovibrio magneticus RS-1   5 2
No Yes Desulfovibrio alaskensis G20   5 2
No Yes Desulfovibrio vulgaris subsp. vulgaris DP4   5 2
No Yes Desulfovibrio salexigens DSM 2638   5 2
No Yes Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774   4 1
No Yes Desulfovibrio africanus str. Walvis Bay   5 2
No Yes Hippea maritima DSM 10411   1 1
No Yes Geobacter daltonii FRC-32   1 1
No Yes Geobacter sp. M21   3 3
No Yes Geobacter uraniireducens Rf4   1 1
No Yes Geobacter lovleyi SZ   1 1
No Yes Geobacter bemidjiensis Bem   3 3
No Yes Geobacter sulfurreducens KN400   1 1
No Yes Geobacter metallireducens GS-15   1 1
No Yes Pelobacter propionicus DSM 2379   2 2
No Yes Pelobacter carbinolicus DSM 2380   3 2
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Anaeromyxobacter sp. Fw109-5   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-1   1 1
No Yes Stigmatella aurantiaca DW4/3-1   1 1
No Yes Corallococcus coralloides DSM 2259   1 1
No Yes Myxococcus xanthus DK 1622   1 1
No Yes Myxococcus fulvus HW-1   1 1
No Yes Rubrivivax gelatinosus IL144   1 1
No Yes Leptothrix cholodnii SP-6   1 1
No Yes Delftia sp. Cs1-4   1 1
No Yes Delftia acidovorans SPH-1   1 1
No Yes Acidovorax citrulli AAC00-1   1 1
No Yes Acidovorax avenae subsp. avenae ATCC 19860   1 1
No Yes Thiobacillus denitrificans ATCC 25259   1 1
No Yes Nitrosospira multiformis ATCC 25196   1 1
No Yes Methylobacillus flagellatus KT   1 1
No Yes Magnetococcus marinus MC-1   3 2
No Yes Brevundimonas subvibrioides ATCC 15264   1 1
No Yes Caulobacter sp. K31   1 1
No Yes Caulobacter crescentus NA1000   1 1
No Yes Caulobacter segnis ATCC 21756   1 1
No Yes Phenylobacterium zucineum HLK1   1 1
No Yes Sphingomonas sp. MM-1   1 1
No Yes Sphingomonas wittichii RW1   1 1
No Yes Zymomonas mobilis subsp. mobilis NCIMB 11163   1 1
No Yes Hirschia baltica ATCC 49814   1 1
No Yes Dinoroseobacter shibae DFL 12   1 1
No Yes Phaeobacter gallaeciensis 2.10   1 1
No Yes Pseudovibrio sp. FO-BEG1   1 1
No Yes Jannaschia sp. CCS1   1 1
No Yes Ruegeria sp. TM1040   1 1
No Yes Ruegeria pomeroyi DSS-3   1 1
No Yes Ketogulonicigenium vulgare Y25   1 1
No Yes Ketogulonigenium vulgarum WSH-001   1 1
No Yes Roseobacter litoralis Och 149   1 1
No Yes Roseobacter denitrificans OCh 114   1 1
No Yes Rhodobacter sphaeroides ATCC 17029   1 1
No Yes Rhodobacter capsulatus SB 1003   1 1
No Yes Paracoccus denitrificans PD1222   1 1
No Yes Rhodospirillum photometricum DSM 122   1 1
No Yes Tistrella mobilis KA081020-065   1 1
No Yes Magnetospirillum magneticum AMB-1   2 1
No Yes Rhodospirillum centenum SW   2 1
No Yes Rhodospirillum rubrum F11   1 1
No Yes Azospirillum lipoferum 4B   2 1
No Yes Azospirillum sp. B510   2 1
No Yes Azospirillum brasilense Sp245   3 2
No Yes Gluconacetobacter xylinus NBRC 3288   1 1
No Yes Granulibacter bethesdensis CGDNIH1   1 1
No Yes Gluconacetobacter diazotrophicus PAl 5   1 1
No Yes Acidiphilium multivorum AIU301   1 1
No Yes Acidiphilium cryptum JF-5   1 1
No Yes Gluconobacter oxydans 621H   1 1
No Yes Acetobacter pasteurianus IFO 3283-01   1 1
No Yes Polymorphum gilvum SL003B-26A1   2 2
No Yes Micavibrio aeruginosavorus ARL-13   1 1
No Yes Candidatus Puniceispirillum marinum IMCC1322   1 1
No Yes alpha proteobacterium HIMB59   1 1
No Yes Candidatus Midichloria mitochondrii IricVA   1 1
No Yes Neorickettsia sennetsu str. Miyayama   1 1
No Yes Neorickettsia risticii str. Illinois   1 1
No Yes Wolbachia endosymbiont of Culex quinquefasciatus Pel   1 1
No Yes Wolbachia sp. wRi   1 1
No Yes Ehrlichia chaffeensis str. Arkansas   1 1
No Yes Ehrlichia canis str. Jake   1 1
No Yes Ehrlichia ruminantium str. Gardel   1 1
No Yes Anaplasma phagocytophilum HZ   1 1
No Yes Anaplasma marginale str. Florida   1 1
No Yes Anaplasma centrale str. Israel   1 1
No Yes Rickettsia bellii OSU 85-389   1 1
No Yes Rickettsia canadensis str. McKiel   1 1
No Yes Rickettsia typhi str. Wilmington   1 1
No Yes Rickettsia prowazekii str. BuV67-CWPP   1 1
No Yes Rickettsia philipii str. 364D   1 1
No Yes Rickettsia heilongjiangensis 054   1 1
No Yes Rickettsia peacockii str. Rustic   1 1
No Yes Rickettsia felis URRWXCal2   1 1
No Yes Rickettsia slovaca 13-B   1 1
No Yes Rickettsia parkeri str. Portsmouth   1 1
No Yes Rickettsia massiliae MTU5   1 1
No Yes Rickettsia japonica YH   1 1
No Yes Rickettsia africae ESF-5   1 1
No Yes Rickettsia rhipicephali str. 3-7-female6-CWPP   1 1
No Yes Rickettsia montanensis str. OSU 85-930   1 1
No Yes Candidatus Rickettsia amblyommii str. GAT-30V   1 1
No Yes Rickettsia australis str. Cutlack   1 1
No Yes Rickettsia akari str. Hartford   1 1
No Yes Rickettsia rickettsii str. 'Sheila Smith'   1 1
No Yes Rickettsia conorii str. Malish 7   1 1
No Yes Starkeya novella DSM 506   1 1
No Yes Xanthobacter autotrophicus Py2   1 1
No Yes Azorhizobium caulinodans ORS 571   1 1
No Yes Methylobacterium chloromethanicum CM4   1 1
No Yes Methylobacterium extorquens AM1   1 1
No Yes Methylobacterium sp. 4-46   1 1
No Yes Methylobacterium populi BJ001   1 1
No Yes Methylobacterium nodulans ORS 2060   1 1
No Yes Methylobacterium radiotolerans JCM 2831   1 1
No Yes Parvibaculum lavamentivorans DS-1   1 1
No Yes Ochrobactrum anthropi ATCC 49188   1 1
No Yes Brucella microti CCM 4915   1 1
No Yes Brucella pinnipedialis B2/94   1 1
No Yes Brucella canis ATCC 23365   1 1
No Yes Brucella suis ATCC 23445   1 1
No Yes Brucella melitensis ATCC 23457   1 1
No Yes Brucella ovis ATCC 25840   1 1
No Yes Brucella abortus S19   1 1
No Yes Sinorhizobium fredii NGR234   1 1
No Yes Sinorhizobium medicae WSM419   1 1
No Yes Sinorhizobium meliloti AK83   1 1
No Yes Genome sequence of Rhizobium sp. strain IRBG74   1 1
No Yes Rhizobium etli CIAT 652   1 1
No Yes Rhizobium leguminosarum bv. viciae 3841   1 1
No Yes Agrobacterium tumefaciens str. C58   1 1
No Yes Agrobacterium radiobacter K84   1 1
No Yes Agrobacterium sp. H13-3   1 1
No Yes Agrobacterium vitis S4   1 1
No Yes Candidatus Liberibacter asiaticus str. psy62   1 1
No Yes Mesorhizobium sp. BNC1   1 1
No Yes Mesorhizobium opportunistum WSM2075   1 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   1 1
No Yes Mesorhizobium loti MAFF303099   1 1
No Yes Methylocella silvestris BL2   1 1
No Yes Beijerinckia indica subsp. indica ATCC 9039   1 1
No Yes Pelagibacterium halotolerans B2   5 2
No Yes Rhodomicrobium vannielii ATCC 17100   1 1
No Yes Hyphomicrobium sp. MC1   1 1
No Yes Hyphomicrobium denitrificans ATCC 51888   1 1
No Yes Oligotropha carboxidovorans OM4   1 1
No Yes Rhodopseudomonas palustris BisA53   1 1
No Yes Nitrobacter winogradskyi Nb-255   1 1
No Yes Nitrobacter hamburgensis X14   1 1
No Yes Bradyrhizobium japonicum USDA 110   1 1
No Yes Bradyrhizobium sp. ORS 278   1 1
No Yes Bartonella tribocorum CIP 105476   1 1
No Yes Bartonella clarridgeiae 73   1 1
No Yes Bartonella henselae str. Houston-1   1 1
No Yes Bartonella grahamii as4aup   1 1
No Yes Bartonella quintana str. Toulouse   1 1
No Yes Bartonella bacilliformis KC583   1 1
No Yes Saccharophagus degradans 2-40   2 1
No Yes Teredinibacter turnerae T7901   3 2
No Yes Cellvibrio japonicus Ueda107   5 3
No Yes Haemophilus parasuis SH0165   4 1
No Yes Haemophilus ducreyi 35000HP   4 1
No Yes Actinobacillus pleuropneumoniae serovar 5b str. L20   4 1
No Yes Tolumonas auensis DSM 9187   2 1
No Yes Aeromonas veronii B565   2 1
No Yes Aeromonas salmonicida subsp. salmonicida A449   1 1
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   1 1
No Yes Vibrio fischeri MJ11   1 1
No Yes Vibrio sp. Ex25   1 1
No Yes Vibrio harveyi ATCC BAA-1116   1 1
No Yes Vibrio parahaemolyticus RIMD 2210633   1 1
No Yes Vibrio splendidus LGP32   1 1
No Yes Vibrio anguillarum 775   1 1
No Yes Vibrio furnissii NCTC 11218   2 1
No Yes Vibrio vulnificus MO6-24/O   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Photobacterium profundum SS9   2 1
No Yes Psychromonas ingrahamii 37   2 1
No Yes Psychromonas sp. CNPT3   2 1
No Yes Idiomarina loihiensis L2TR   3 2
No Yes Ferrimonas balearica DSM 9799   1 1
No Yes Shewanella piezotolerans WP3   2 1
No Yes Shewanella loihica PV-4   2 1
No Yes Shewanella halifaxensis HAW-EB4   2 1
No Yes Shewanella sediminis HAW-EB3   1 1
No Yes Shewanella denitrificans OS217   2 1
No Yes Shewanella pealeana ATCC 700345   2 1
No Yes Shewanella oneidensis MR-1   2 1
No Yes Shewanella baltica OS185   2 1
No Yes Shewanella woodyi ATCC 51908   1 1
No Yes Shewanella sp. MR-4   2 1
No Yes Shewanella amazonensis SB2B   2 1
No Yes Shewanella violacea DSS12   2 1
No Yes Shewanella frigidimarina NCIMB 400   2 1
No Yes Shewanella putrefaciens CN-32   2 1
No Yes Colwellia psychrerythraea 34H   2 2
No Yes Pseudoalteromonas sp. SM9913   3 2
No Yes Pseudoalteromonas atlantica T6c   1 1
No Yes Pseudoalteromonas haloplanktis TAC125   3 2
No Yes Glaciecola sp. 4H-3-7+YE-5   1 1
No Yes Glaciecola nitratireducens FR1064   1 1
No Yes Marinobacter adhaerens HP15   3 2
No Yes Marinobacter sp. BSs20148   4 2
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   3 2
No Yes Marinobacter aquaeolei VT8   3 2
No Yes Alteromonas sp. SN2   1 1
No Yes Alteromonas macleodii str. 'Deep ecotype'   1 1
No Yes Hahella chejuensis KCTC 2396   5 3
No Yes Marinomonas posidonica IVIA-Po-181   3 2
No Yes Marinomonas sp. MWYL1   3 2
No Yes Marinomonas mediterranea MMB-1   2 1
No Yes Chromohalobacter salexigens DSM 3043   2 1
No Yes Halomonas elongata DSM 2581   1 1
No Yes Halothiobacillus neapolitanus c2   2 1
No Yes Nitrosococcus watsonii C-113   2 1
No Yes Nitrosococcus halophilus Nc4   2 1
No Yes Nitrosococcus oceani ATCC 19707   2 1
No Yes gamma proteobacterium HdN1   2 1
No Yes Photorhabdus asymbiotica   4 1
No Yes Photorhabdus luminescens subsp. laumondii TTO1   4 1
No Yes Xenorhabdus bovienii SS-2004   4 1
No Yes Xenorhabdus nematophila ATCC 19061   4 1
No Yes Providencia stuartii MRSN 2154   4 1
No Yes Proteus mirabilis HI4320   4 1
No Yes Edwardsiella ictaluri 93-146   4 1
No Yes Edwardsiella tarda EIB202   4 1
No Yes Rahnella sp. Y9602   4 1
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   4 1
No Yes Yersinia pseudotuberculosis IP 31758   4 1
No Yes Yersinia pestis Pestoides F   4 1
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   4 1
No Yes Serratia sp. AS12   4 1
No Yes Serratia sp. ATCC 39006   4 1
No Yes Serratia plymuthica AS9   4 1
No Yes Serratia proteamaculans 568   4 1
No Yes Dickeya dadantii Ech703   4 1
No Yes Dickeya zeae Ech1591   4 1
No Yes Pectobacterium wasabiae WPP163   4 1
No Yes Pectobacterium sp. SCC3193   4 1
No Yes Pectobacterium atrosepticum SCRI1043   4 1
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   4 1
No Yes Sodalis glossinidius str. 'morsitans'   4 1
No Yes Pantoea sp. At-9b   4 1
No Yes Pantoea vagans C9-1   4 1
No Yes Pantoea ananatis LMG 20103   4 1
No Yes Erwinia tasmaniensis Et1/99   4 1
No Yes Erwinia sp. Ejp617   4 1
No Yes Erwinia billingiae Eb661   4 1
No Yes Erwinia pyrifoliae Ep1/96   4 1
No Yes Erwinia amylovora ATCC 49946   4 1
No Yes Escherichia blattae DSM 4481   4 1
No Yes Cronobacter turicensis z3032   4 1
No Yes Cronobacter sakazakii ES15   4 1
No Yes Enterobacteriaceae bacterium strain FGI 57   4 1
No Yes Shigella sonnei Ss046   4 1
No Yes Shigella flexneri 5 str. 8401   4 1
No Yes Shigella dysenteriae Sd197   4 1
No Yes Shigella boydii CDC 3083-94   4 1
No Yes Salmonella bongori NCTC 12419   4 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   4 1
No Yes Klebsiella oxytoca E718   4 1
No Yes Klebsiella variicola At-22   4 1
No Yes Klebsiella pneumoniae NTUH-K2044   4 1
No Yes Enterobacter aerogenes KCTC 2190   4 1
No Yes Escherichia fergusonii ATCC 35469   4 1
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   4 1
No Yes Enterobacter sp. R4-368   4 1
No Yes Enterobacter sp. 638   4 1
No Yes Enterobacter asburiae LF7a   4 1
No Yes Enterobacter cloacae subsp. dissolvens SDM   4 1
No Yes Citrobacter rodentium ICC168   4 1
No Yes Citrobacter koseri ATCC BAA-895   4 1
No Yes Azotobacter vinelandii DJ   1 1
No Yes Pseudomonas sp. UW4   1 1
No Yes Pseudomonas syringae pv. tomato str. DC3000   1 1
No Yes Pseudomonas putida F1   1 1
No Yes Pseudomonas aeruginosa UCBPP-PA14   1 1
No Yes Pseudomonas sp. VLB120   1 1
No Yes Psychrobacter sp. G   2 1
No Yes Psychrobacter sp. PRwf-1   2 1
No Yes Psychrobacter arcticus 273-4   2 1
No Yes Psychrobacter cryohalolentis K5   2 1
No Yes Moraxella catarrhalis RH4   2 1
No Yes Acinetobacter oleivorans DR1   2 1
No Yes Acinetobacter calcoaceticus PHEA-2   2 1
No Yes Acinetobacter baumannii ATCC 17978   2 1
No Yes Acinetobacter sp. ADP1   2 1
No Yes Thiomicrospira crunogena XCL-2   2 1
No Yes Thioalkalimicrobium cyclicum ALM1   2 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 23 15
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 13 10
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 12 8
No Yes Ascaris suum Victoria/Ghent Pig roundworm 8 5
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 18 12
No Yes Cryptococcus neoformans var. grubii H99   6 4
No Yes Cryptococcus neoformans B-3501A   6 4
No Yes Cryptococcus neoformans JEC21   4 2
No Yes Paracoccidioides brasiliensis Pb01   8 5
No Yes Paracoccidioides brasiliensis Pb03   7 5
No Yes Coccidioides posadasii str. Silveira   6 4
No Yes Coccidioides immitis RMSCC 3703   5 4
No Yes Coccidioides immitis RMSCC 2394   7 5
No Yes Coccidioides immitis H538.4   7 5
No Yes Ajellomyces dermatitidis ER-3   7 5
No Yes Histoplasma capsulatum H143   5 4
No Yes Histoplasma capsulatum H88   7 5
No Yes Histoplasma capsulatum G186AR   7 5
No Yes Aspergillus fumigatus A1163   7 5
No Yes Candida albicans WO-1   8 6
No Yes Saccharomyces cerevisiae UC5   9 5
No Yes Saccharomyces cerevisiae PW5   10 6
No Yes Saccharomyces cerevisiae FL100   2 1
No Yes Saccharomyces cerevisiae CLIB324   5 3
No Yes Saccharomyces cerevisiae CBS7960   10 6
No Yes Saccharomyces cerevisiae YJM269   9 5
No Yes Saccharomyces cerevisiae T7   10 6
No Yes Saccharomyces cerevisiae FostersB   8 6
No Yes Saccharomyces cerevisiae FostersO   8 5
No Yes Saccharomyces cerevisiae VL3   7 5
No Yes Saccharomyces cerevisiae Vin13   8 5
No Yes Saccharomyces cerevisiae LalvinQA23   8 5
No Yes Saccharomyces cerevisiae AWRI796   7 5
No Yes Saccharomyces cerevisiae Sigma1278b   10 6
No Yes Saccharomyces cerevisiae W303   10 6
No Yes Saccharomyces cerevisiae JAY291   9 5
No Yes Saccharomyces cerevisiae AWRI1631   3 2
No Yes Saccharomyces cerevisiae YPS163   2 1
No Yes Saccharomyces cerevisiae M22   3 2
No Yes Saccharomyces cerevisiae T73   5 3
No Yes Saccharomyces cerevisiae CLIB215   6 3
No Yes Saccharomyces cerevisiae Y10   2 1
No Yes Saccharomyces cerevisiae YJM789   10 6
No Yes Saccharomyces cerevisiae YJM789   10 6
No Yes Saccharomyces cerevisiae RM11-1a   10 6
No Yes Saccharomyces cerevisiae RM11-1a   10 6
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 10 6
No Yes Schizosaccharomyces pombe 972h-   8 5
No Yes Batrachochytrium dendrobatidis JEL423   6 4
No Yes Batrachochytrium dendrobatidis JAM81   6 4
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 12 6
No Yes Hordeum vulgare 22 Domesticated barley 33 16
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 21 13
No Yes Trypanosoma brucei Lister 427 v4.1   5 5
No Yes Neospora caninum Nc-Liverpool 6.2   10 5
No Yes Plasmodium falciparum HB3   5 3
No Yes Plasmodium falciparum Dd2   5 3
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   1 1
No Yes Synechocystis sp. PCC 6803 substr. GT-I   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Synechococcus sp. PCC 7002   1 1
No Yes Synechococcus elongatus PCC 6301   1 1
No Yes Crinalium epipsammum PCC 9333   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Oscillatoria acuminata PCC 6304   1 1
No Yes Arthrospira platensis NIES-39   1 1
No Yes Cyanothece sp. PCC 7822   1 1
No Yes Cyanothece sp. PCC 7424   1 1
No Yes Cyanothece sp. ATCC 51142   1 1
No Yes Cyanothece sp. PCC 8801   1 1
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   1 1
No Yes Stanieria cyanosphaera PCC 7437   1 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   1 1
No Yes Cylindrospermum stagnale PCC 7417   1 1
No Yes Anabaena cylindrica PCC 7122   1 1
No Yes Adlercreutzia equolifaciens DSM 19450   2 1
No Yes Frankia sp. EuI1c   1 1
No Yes Frankia sp. CcI3   1 1
No Yes Nocardiopsis alba ATCC BAA-2165   1 1
No Yes Streptomyces albus J1074   1 1
No Yes Streptomyces rapamycinicus NRRL 5491   1 1
No Yes Streptomyces davawensis JCM 4913   1 1
No Yes Streptomyces fulvissimus DSM 40593   1 1
No Yes Streptomyces venezuelae ATCC 10712   1 1
No Yes Streptomyces collinus Tu 365   1 1
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   1 1
No Yes Saccharothrix espanaensis DSM 44229   1 1
No Yes Amycolatopsis mediterranei RB   1 1
No Yes Amycolatopsis mediterranei S699   1 1
No Yes Amycolatopsis mediterranei S699   1 1
No Yes Amycolatopsis orientalis HCCB10007   1 1
No Yes Actinoplanes friuliensis DSM 7358   1 1
No Yes Rhodococcus pyridinivorans SB3094   1 1
No Yes Rhodococcus erythropolis CCM2595   1 1
No Yes Nocardia brasiliensis ATCC 700358   1 1
No Yes Mycobacterium sp. MOTT36Y   1 1
No Yes Mycobacterium sp. JDM601   1 1
No Yes Mycobacterium abscessus subsp. bolletii 50594   1 1
No Yes Mycobacterium liflandii 128FXT   1 1
No Yes Mycobacterium sp. KMS   1 1
No Yes Mycobacterium sp. MCS   1 1
No Yes Mycobacterium yongonense 05-1390   1 1
No Yes Mycobacterium intracellulare MOTT-64   1 1
No Yes Mycobacterium indicus pranii MTCC 9506   1 1
No Yes Mycobacterium intracellulare MOTT-02   1 1
No Yes Mycobacterium avium subsp. paratuberculosis MAP4   1 1
No Yes Mycobacterium avium subsp. paratuberculosis K-10   1 1
No Yes Mycobacterium canettii CIPT 140070017   1 1
No Yes Mycobacterium canettii CIPT 140060008   1 1
No Yes Mycobacterium canettii CIPT 140070008   1 1
No Yes Mycobacterium canettii CIPT 140070010   1 1
No Yes Mycobacterium tuberculosis EAI5/NITR206   1 1
No Yes Mycobacterium tuberculosis EAI5   1 1
No Yes Mycobacterium tuberculosis CAS/NITR204   1 1
No Yes Mycobacterium tuberculosis str. Beijing/NITR203   1 1
No Yes Mycobacterium tuberculosis UT205   1 1
No Yes Mycobacterium tuberculosis RGTB423   1 1
No Yes Mycobacterium tuberculosis RGTB327   1 1
No Yes Mycobacterium tuberculosis CTRI-2   1 1
No Yes Mycobacterium tuberculosis str. Erdman = ATCC 35801   1 1
No Yes Mycobacterium tuberculosis KZN 605   1 1
No Yes Mycobacterium tuberculosis KZN 4207   1 1
No Yes Mycobacterium tuberculosis CCDC5180   1 1
No Yes Mycobacterium tuberculosis CCDC5079   1 1
No Yes Mycobacterium tuberculosis CCDC5079   1 1
No Yes Mycobacterium tuberculosis H37Ra   1 1
No Yes Mycobacterium tuberculosis str. Haarlem/NITR202   1 1
No Yes Mycobacterium tuberculosis str. Haarlem   1 1
No Yes Mycobacterium tuberculosis F11   1 1
No Yes Mycobacterium tuberculosis H37Rv   1 1
No Yes Mycobacterium tuberculosis CDC1551   1 1
No Yes Mycobacterium bovis AF2122/97   1 1
No Yes Mycobacterium bovis BCG str. Korea 1168P   1 1
No Yes Mycobacterium bovis BCG str. Mexico   1 1
No Yes Mycobacterium bovis BCG str. Tokyo 172   1 1
No Yes Mycobacterium gilvum Spyr1   1 1
No Yes Mycobacterium smegmatis str. MC2 155   1 1
No Yes Mycobacterium leprae TN   1 1
No Yes Mycobacterium kansasii ATCC 12478   1 1
No Yes Leifsonia xyli subsp. cynodontis DSM 46306   1 1
No Yes Clavibacter michiganensis subsp. sepedonicus   1 1
No Yes Clavibacter michiganensis subsp. nebraskensis NCPPB 2581   1 1
No Yes Actinomyces graevenitzii C83   1 1
No Yes Actinomyces odontolyticus ATCC 17982   1 1
No Yes Actinomyces viscosus C505   1 1
No Yes Dehalococcoides mccartyi GY50   1 1
No Yes Dehalococcoides mccartyi DCMB5   1 1
No Yes Dehalococcoides mccartyi BTF08   1 1
No Yes Dehalococcoides sp. GT   1 1
No Yes Dehalococcoides sp. VS   1 1
No Yes Dehalococcoides sp. CBDB1   1 1
No Yes Chthonomonas calidirosea T49   4 1
No Yes Deinococcus peraridilitoris DSM 19664   3 2
No Yes Thermus oshimai JL-2   1 1
No Yes Thermus thermophilus JL-18   1 1
No Yes Thermus thermophilus SG0.5JP17-16   1 1
No Yes Thermus thermophilus HB8   1 1
No Yes Clostridium thermocellum DSM 1313   1 1
No Yes Faecalibacterium prausnitzii L2-6   1 1
No Yes Clostridium acidurici 9a   2 2
No Yes Desulfosporosinus meridiei DSM 13257   1 1
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   1 1
No Yes Desulfitobacterium hafniense DCB-2   1 1
No Yes Desulfotomaculum gibsoniae DSM 7213   1 1
No Yes Clostridium difficile BI1   1 1
No Yes Clostridium difficile R20291   1 1
No Yes Clostridium difficile CD196   1 1
No Yes Clostridium saccharolyticum Clostridium cf. saccharolyticum K10   4 1
No Yes Coprococcus catus GD/7   5 2
No Yes Roseburia intestinalis XB6B4   3 1
No Yes Candidatus Arthromitus sp. SFB-rat-Yit   1 1
No Yes Candidatus Arthromitus sp. SFB-mouse-Yit   1 1
No Yes Clostridium sp. SY8519   2 1
No Yes Clostridium saccharobutylicum DSM 13864   2 2
No Yes Clostridium autoethanogenum DSM 10061   8 4
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   2 2
No Yes Clostridium kluyveri NBRC 12016   7 4
No Yes Clostridium tetani genome 12124569   6 3
No Yes Clostridium perfringens SM101   5 2
No Yes Clostridium perfringens str. 13   5 2
No Yes Clostridium pasteurianum BC1   5 2
No Yes Clostridium botulinum H04402 065   6 3
No Yes Clostridium botulinum BKT015925   8 3
No Yes Clostridium botulinum F str. 230613   6 3
No Yes Clostridium botulinum F str. Langeland   6 3
No Yes Clostridium botulinum E3 str. Alaska E43   2 2
No Yes Clostridium botulinum B1 str. Okra   6 3
No Yes Clostridium botulinum Ba4 str. 657   6 3
No Yes Clostridium botulinum A2 str. Kyoto   6 3
No Yes Clostridium botulinum A3 str. Loch Maree   6 3
No Yes Clostridium botulinum A str. Hall   6 3
No Yes Clostridium botulinum A str. ATCC 19397   6 3
No Yes Clostridium acetobutylicum DSM 1731   7 3
No Yes Clostridium acetobutylicum EA 2018   7 3
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   1 1
No Yes Thermoanaerobacterium thermosaccharolyticum M0795   1 1
No Yes Thermacetogenium phaeum DSM 12270   1 1
No Yes Thermoanaerobacter sp. X513   1 1
No Yes Exiguobacterium antarcticum B7   1 1
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1   1 1
No Yes Thermobacillus composti KWC4   1 1
No Yes Paenibacillus sp. Y412MC10   1 1
No Yes Paenibacillus mucilaginosus KNP414   1 1
No Yes Paenibacillus mucilaginosus K02   1 1
No Yes Paenibacillus larvae subsp. larvae DSM 25430   1 1
No Yes Paenibacillus polymyxa CR1   1 1
No Yes Paenibacillus polymyxa SC2   1 1
No Yes Paenibacillus polymyxa E681   1 1
No Yes Geobacillus sp. C56-T3   1 1
No Yes Geobacillus sp. Y4.1MC1   1 1
No Yes Geobacillus sp. Y412MC52   1 1
No Yes Geobacillus sp. Y412MC61   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5113   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   1 1
No Yes Bacillus amyloliquefaciens LFB112   1 1
No Yes Bacillus amyloliquefaciens CC178   1 1
No Yes Bacillus amyloliquefaciens Y2   1 1
No Yes Bacillus amyloliquefaciens IT-45   1 1
No Yes Bacillus amyloliquefaciens XH7   1 1
No Yes Bacillus amyloliquefaciens LL3   1 1
No Yes Bacillus amyloliquefaciens TA208   1 1
No Yes Bacillus amyloliquefaciens DSM 7   1 1
No Yes Bacillus licheniformis 9945A   1 1
No Yes Bacillus subtilis PY79   1 1
No Yes Bacillus subtilis XF-1   1 1
No Yes Bacillus subtilis QB928   1 1
No Yes Bacillus subtilis BSn5   1 1
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   1 1
No Yes Bacillus subtilis subsp. subtilis str. BSP1   1 1
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   1 1
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   1 1
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   1 1
No Yes Bacillus subtilis subsp. spizizenii str. W23   1 1
No Yes Bacillus subtilis subsp. natto BEST195   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus infantis NRRL B-14911   1 1
No Yes Bacillus cereus subsp. cytotoxis NVH 391-98   1 1
No Yes Bacillus toyonensis BCT-7112   1 1
No Yes Bacillus thuringiensis HD-771   1 1
No Yes Bacillus thuringiensis HD-789   1 1
No Yes Bacillus thuringiensis MC28   1 1
No Yes Bacillus thuringiensis serovar chinensis CT-43   1 1
No Yes Bacillus thuringiensis YBT-1518   1 1
No Yes Bacillus thuringiensis Bt407   1 1
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   1 1
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   1 1
No Yes Bacillus thuringiensis BMB171   1 1
No Yes Bacillus thuringiensis serovar finitimus YBT-020   1 1
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   1 1
No Yes Bacillus cereus FRI-35   1 1
No Yes Bacillus cereus biovar anthracis str. CI   1 1
No Yes Bacillus cereus AH820   1 1
No Yes Bacillus cereus AH187   1 1
No Yes Bacillus cereus B4264   1 1
No Yes Bacillus cereus G9842   1 1
No Yes Bacillus cereus Q1   1 1
No Yes Bacillus cereus F837/76   1 1
No Yes Bacillus cereus NC7401   1 1
No Yes Bacillus cereus E33L   1 1
No Yes Bacillus cereus ATCC 14579   1 1
No Yes Bacillus cereus ATCC 10987   1 1
No Yes Bacillus anthracis str. H9401   1 1
No Yes Bacillus anthracis str. CDC 684   1 1
No Yes Bacillus anthracis str. 'Ames Ancestor'   1 1
No Yes Bacillus anthracis str. Sterne   1 1
No Yes Bacillus anthracis str. Ames   1 1
No Yes Bacillus megaterium QM B1551   1 1
No Yes Bacillus coagulans 36D1   1 1
No Yes Chlorobium phaeobacteroides BS1   1 1
No Yes Rhodothermus marinus SG0.5JP17-172   1 1
No Yes Echinicola vietnamensis DSM 17526   1 1
No Yes Emticicia oligotrophica DSM 17448   1 1
No Yes Prevotella sp. oral taxon 299 str. F0039   1 1
No Yes Prevotella dentalis DSM 3688   1 1
No Yes Alistipes shahii WAL 8301   1 1
No Yes Bacteroides xylanisolvens XB1A   1 1
No Yes Bacteroides fragilis 638R   1 1
No Yes Bacteroides fragilis NCTC 9343   1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   1 1
No Yes Chlamydia pecorum P787   3 2
No Yes Chlamydia pecorum W73   3 2
No Yes Chlamydia pecorum PV3056/3   3 2
No Yes Chlamydophila pneumoniae LPCoLN   3 2
No Yes Chlamydophila pneumoniae J138   3 2
No Yes Chlamydophila pneumoniae CWL029   3 2
No Yes Chlamydophila pneumoniae AR39   3 2
No Yes Chlamydia psittaci 01DC12   3 2
No Yes Chlamydia psittaci WC   3 2
No Yes Chlamydia psittaci M56   3 2
No Yes Chlamydia psittaci WS/RT/E30   2 1
No Yes Chlamydia psittaci VS225   3 2
No Yes Chlamydia psittaci MN   3 2
No Yes Chlamydia psittaci GR9   2 1
No Yes Chlamydia psittaci 84/55   3 2
No Yes Chlamydia psittaci 08DC60   3 2
No Yes Chlamydia psittaci 02DC15   3 2
No Yes Chlamydia psittaci C19/98   3 2
No Yes Chlamydia psittaci NJ1   3 2
No Yes Chlamydia psittaci CP3   3 2
No Yes Chlamydophila psittaci RD1   3 2
No Yes Chlamydia psittaci Mat116   2 1
No Yes Chlamydophila psittaci 6BC   3 2
No Yes Chlamydophila psittaci 6BC   3 2
No Yes Chlamydia trachomatis C/TW-3   4 2
No Yes Chlamydia trachomatis L2/434/Bu(f)   4 2
No Yes Chlamydia trachomatis L2/434/Bu(i)   4 2
No Yes Chlamydia trachomatis IU888   3 1
No Yes Chlamydia trachomatis IU824   3 1
No Yes Chlamydia trachomatis L2b/Canada2   4 2
No Yes Chlamydia trachomatis L2b/Canada1   4 2
No Yes Chlamydia trachomatis L3/404/LN   4 2
No Yes Chlamydia trachomatis L2b/Ams5   4 2
No Yes Chlamydia trachomatis L2b/Ams4   4 2
No Yes Chlamydia trachomatis L2b/Ams3   4 2
No Yes Chlamydia trachomatis L2b/Ams2   4 2
No Yes Chlamydia trachomatis L2b/Ams1   4 2
No Yes Chlamydia trachomatis L2b/795   4 2
No Yes Chlamydia trachomatis L2b/CV204   4 2
No Yes Chlamydia trachomatis L2b/LST   4 2
No Yes Chlamydia trachomatis L2b/UCH-2   4 2
No Yes Chlamydia trachomatis L2b/8200/07   4 2
No Yes Chlamydia trachomatis L2/25667R   4 2
No Yes Chlamydia trachomatis L1/224   4 2
No Yes Chlamydia trachomatis L1/115   4 2
No Yes Chlamydia trachomatis L1/440/LN   4 2
No Yes Chlamydia trachomatis K/SotonK1   4 2
No Yes Chlamydia trachomatis Ia/SotonIa3   4 2
No Yes Chlamydia trachomatis Ia/SotonIa1   4 2
No Yes Chlamydia trachomatis G/SotonG1   4 2
No Yes Chlamydia trachomatis F/SotonF3   4 2
No Yes Chlamydia trachomatis F/SW5   3 1
No Yes Chlamydia trachomatis F/SW4   3 1
No Yes Chlamydia trachomatis E/SotonE8   4 2
No Yes Chlamydia trachomatis E/SotonE4   4 2
No Yes Chlamydia trachomatis E/SW3   3 1
No Yes Chlamydia trachomatis D/SotonD6   4 2
No Yes Chlamydia trachomatis D/SotonD5   4 2
No Yes Chlamydia trachomatis D/SotonD1   4 2
No Yes Chlamydia trachomatis A/5291   4 2
No Yes Chlamydia trachomatis A/363   4 2
No Yes Chlamydia trachomatis RC-J/971   4 2
No Yes Chlamydia trachomatis RC-L2/55   4 2
No Yes Chlamydia trachomatis J/6276tet1   4 2
No Yes Chlamydia trachomatis RC-J/966   4 2
No Yes Chlamydia trachomatis RC-J(s)/122   4 2
No Yes Chlamydia trachomatis RC-F(s)/342   4 2
No Yes Chlamydia trachomatis RC-L2(s)/3   4 2
No Yes Chlamydia trachomatis RC-J/953   4 2
No Yes Chlamydia trachomatis RC-J943   4 2
No Yes Chlamydia trachomatis RC-Fs852   4 2
No Yes Chlamydia trachomatis RC-L2s46   4 2
No Yes Chlamydia trachomatis RC-F69   4 2
No Yes Chlamydia trachomatis L2c   4 2
No Yes Chlamydia trachomatis D-LC   4 2
No Yes Chlamydia trachomatis D-EC   4 2
No Yes Chlamydia trachomatis G/9301   4 2
No Yes Chlamydia trachomatis G/11074   4 2
No Yes Chlamydia trachomatis G/11222   4 2
No Yes Chlamydia trachomatis G/9768   4 2
No Yes Chlamydia trachomatis E/150   4 2
No Yes Chlamydia trachomatis E/11023   4 2
No Yes Chlamydia trachomatis B/TZ1A828/OT   4 2
No Yes Chlamydia trachomatis Sweden2   3 1
No Yes Chlamydia trachomatis E/Bour   4 2
No Yes Chlamydia trachomatis A2497   4 2
No Yes Chlamydia trachomatis A2497   4 2
No Yes Chlamydia trachomatis L2b/UCH-1/proctitis   4 2
No Yes Chlamydia trachomatis 434/Bu   4 2
No Yes Chlamydia trachomatis A/HAR-13   4 2
No Yes Chlamydia trachomatis D/UW-3/CX   4 2
No Yes Singulisphaera acidiphila DSM 18658   1 1
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. JB197   1 1
No Yes Leptospira interrogans serovar Lai str. 56601   1 1
No Yes Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130   1 1
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'   1 1
No Yes Brachyspira pilosicoli WesB   1 1
No Yes Brachyspira pilosicoli B2904   1 1
No Yes Brachyspira pilosicoli P43/6/78   1 1
No Yes Borrelia garinii NMJW1   1 1
No Yes Borrelia garinii BgVir   1 1
No Yes Borrelia afzelii HLJ01   1 1
No Yes Borrelia afzelii PKo   1 1
No Yes Borrelia burgdorferi CA382   1 1
No Yes Borrelia burgdorferi JD1   1 1
No Yes Borrelia burgdorferi N40   1 1
No Yes Borrelia burgdorferi ZS7   1 1
No Yes Borrelia miyamotoi LB-2001   1 1
No Yes Treponema pedis str. T A4   2 1
No Yes Treponema pallidum str. Fribourg-Blanc   2 1
No Yes Treponema pallidum subsp. pertenue str. Gauthier   2 1
No Yes Treponema pallidum subsp. pertenue str. CDC2   2 1
No Yes Treponema pallidum subsp. pertenue str. SamoaD   2 1
No Yes Treponema pallidum subsp. pallidum str. Mexico A   2 1
No Yes Treponema pallidum subsp. pallidum str. Chicago   2 1
No Yes Treponema pallidum subsp. pallidum DAL-1   2 1
No Yes Treponema pallidum subsp. pallidum str. Nichols   2 1
No Yes Spirochaeta thermophila DSM 6578   3 1
No Yes Leptospirillum ferriphilum ML-04   1 1
No Yes Fusobacterium nucleatum subsp. vincentii 3_1_36A2   1 1
No Yes Fusobacterium nucleatum subsp. animalis 4_8   1 1
No Yes Acidithiobacillus ferrooxidans ATCC 23270   1 1
No Yes Bdellovibrio exovorus JSS   1 1
No Yes Bdellovibrio bacteriovorus str. Tiberius   1 1
No Yes Desulfocapsa sulfexigens DSM 10523   2 1
No Yes Desulfobacula toluolica Tol2   2 1
No Yes Lawsonia intracellularis N343   5 2
No Yes Desulfovibrio hydrothermalis AM13 = DSM 14728   10 4
No Yes Desulfovibrio vulgaris RCH1   5 2
No Yes Desulfovibrio vulgaris str. 'Miyazaki F'   5 2
No Yes Desulfovibrio vulgaris str. Hildenborough   5 2
No Yes Desulfovibrio gigas DSM 1382 = ATCC 19364   4 1
No Yes Desulfovibrio desulfuricans ND132   4 1
No Yes Geobacter sp. M18   2 2
No Yes Geobacter sulfurreducens PCA   1 1
No Yes Anaeromyxobacter sp. K   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-C   1 1
No Yes Nitrosomonas sp. AL212   1 1
No Yes Caulobacter crescentus CB15   1 1
No Yes Zymomonas mobilis subsp. mobilis ATCC 29191   1 1
No Yes Zymomonas mobilis subsp. mobilis CP4   1 1
No Yes Zymomonas mobilis subsp. mobilis ATCC 10988   1 1
No Yes Zymomonas mobilis subsp. mobilis ZM4   1 1
No Yes Zymomonas mobilis subsp. pomaceae ATCC 29192   1 1
No Yes Phaeobacter gallaeciensis DSM 17395   1 1
No Yes Phaeobacter gallaeciensis DSM 26640   1 1
No Yes Leisingera methylohalidivorans DSM 14336   1 1
No Yes Octadecabacter antarcticus 307   1 1
No Yes Octadecabacter arcticus 238   1 1
No Yes Rhodobacter sphaeroides KD131   1 1
No Yes Rhodobacter sphaeroides ATCC 17025   1 1
No Yes Rhodobacter sphaeroides 2.4.1   1 1
No Yes Paracoccus aminophilus JCM 7686   1 1
No Yes Candidatus Endolissoclinum faulkneri L2   1 1
No Yes Magnetospirillum gryphiswaldense MSR-1 v2   2 1
No Yes Rhodospirillum rubrum ATCC 11170   1 1
No Yes Gluconacetobacter diazotrophicus PAl 5   1 1
No Yes Gluconobacter oxydans H24   2 1
No Yes Acetobacter pasteurianus 386B   1 1
No Yes Acetobacter pasteurianus IFO 3283-12   1 1
No Yes Acetobacter pasteurianus IFO 3283-01-42C   1 1
No Yes Acetobacter pasteurianus IFO 3283-32   1 1
No Yes Acetobacter pasteurianus IFO 3283-26   1 1
No Yes Acetobacter pasteurianus IFO 3283-22   1 1
No Yes Acetobacter pasteurianus IFO 3283-07   1 1
No Yes Acetobacter pasteurianus IFO 3283-03   1 1
No Yes Micavibrio aeruginosavorus EPB   1 1
No Yes Wolbachia endosymbiont of Drosophila melanogaster   1 1
No Yes Wolbachia endosymbiont of Onchocerca ochengi str. Adamawa_Cameroon   1 1
No Yes Wolbachia endosymbiont strain TRS of Brugia malayi   1 1
No Yes Wolbachia endosymbiont of Drosophila simulans wHa   1 1
No Yes Wolbachia endosymbiont of Drosophila simulans wNo   1 1
No Yes Ehrlichia muris AS145   1 1
No Yes Ehrlichia ruminantium str. Welgevonden   1 1
No Yes Ehrlichia ruminantium str. Welgevonden   1 1
No Yes Anaplasma phagocytophilum str. Dog2   1 1
No Yes Anaplasma phagocytophilum str. HZ2   1 1
No Yes Anaplasma phagocytophilum str. JM   1 1
No Yes Anaplasma marginale str. Dawn   1 1
No Yes Anaplasma marginale str. St. Maries   1 1
No Yes Rickettsia bellii RML369-C   1 1
No Yes Rickettsia canadensis str. CA410   1 1
No Yes Rickettsia typhi str. B9991CWPP   1 1
No Yes Rickettsia typhi str. TH1527   1 1
No Yes Rickettsia prowazekii str. Breinl   1 1
No Yes Rickettsia prowazekii str. NMRC Madrid E   1 1
No Yes Rickettsia prowazekii str. RpGvF24   1 1
No Yes Rickettsia prowazekii str. GvV257   1 1
No Yes Rickettsia prowazekii str. Dachau   1 1
No Yes Rickettsia prowazekii str. Katsinyian   1 1
No Yes Rickettsia prowazekii str. Chernikova   1 1
No Yes Rickettsia prowazekii Rp22   1 1
No Yes Rickettsia prowazekii str. Madrid E   1 1
No Yes Rickettsia slovaca str. D-CWPP   1 1
No Yes Rickettsia massiliae str. AZT80   1 1
No Yes Rickettsia rickettsii str. Arizona   1 1
No Yes Rickettsia rickettsii str. Brazil   1 1
No Yes Rickettsia rickettsii str. Hauke   1 1
No Yes Rickettsia rickettsii str. Colombia   1 1
No Yes Rickettsia rickettsii str. Hlp#2   1 1
No Yes Rickettsia rickettsii str. Hino   1 1
No Yes Rickettsia rickettsii str. Iowa   1 1
No Yes Methylobacterium extorquens DM4   1 1
No Yes Methylobacterium extorquens PA1   1 1
No Yes Brucella ceti TE10759-12   1 1
No Yes Brucella ceti TE28753-12   1 1
No Yes Brucella canis HSK A52141   1 1
No Yes Brucella suis VBI22   1 1
No Yes Brucella suis 1330   1 1
No Yes Brucella suis 1330   1 1
No Yes Brucella melitensis NI   1 1
No Yes Brucella melitensis M5-90   1 1
No Yes Brucella melitensis M28   1 1
No Yes Brucella melitensis bv. 1 str. 16M   1 1
No Yes Brucella abortus A13334   1 1
No Yes Brucella melitensis biovar Abortus 2308   1 1
No Yes Brucella abortus bv. 1 str. 9-941   1 1
No Yes Sinorhizobium fredii USDA 257   1 1
No Yes Sinorhizobium fredii HH103   1 1
No Yes Sinorhizobium meliloti 2011   1 1
No Yes Sinorhizobium meliloti GR4   1 1
No Yes Sinorhizobium meliloti Rm41   1 1
No Yes Sinorhizobium meliloti SM11   1 1
No Yes Sinorhizobium meliloti BL225C   1 1
No Yes Sinorhizobium meliloti 1021   1 1
No Yes Rhizobium etli CFN 42   1 1
No Yes Rhizobium etli bv. mimosae str. Mim1   1 1
No Yes Rhizobium tropici CIAT 899   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   1 1
No Yes Liberibacter crescens BT-1   1 1
No Yes Candidatus Liberibacter solanacearum CLso-ZC1   1 1
No Yes Candidatus Liberibacter americanus str. Sao Paulo   1 1
No Yes Candidatus Liberibacter asiaticus str. gxpsy   1 1
No Yes Mesorhizobium australicum WSM2073   1 1
No Yes Hyphomicrobium nitrativorans NL23   1 1
No Yes Hyphomicrobium denitrificans 1NES1   1 1
No Yes Oligotropha carboxidovorans OM5   1 1
No Yes Oligotropha carboxidovorans OM5   1 1
No Yes Rhodopseudomonas palustris DX-1   1 1
No Yes Rhodopseudomonas palustris TIE-1   1 1
No Yes Rhodopseudomonas palustris HaA2   1 1
No Yes Rhodopseudomonas palustris BisB5   1 1
No Yes Rhodopseudomonas palustris BisB18   1 1
No Yes Rhodopseudomonas palustris CGA009   1 1
No Yes Bradyrhizobium sp. S23321   1 1
No Yes Bradyrhizobium sp. BTAi1   1 1
No Yes Bradyrhizobium oligotrophicum S58   1 1
No Yes Bradyrhizobium japonicum USDA 6   1 1
No Yes Bartonella australis Aust/NH1   1 1
No Yes Bartonella vinsonii subsp. berkhoffii str. Winnie   1 1
No Yes Bartonella quintana RM-11   1 1
No Yes Simiduia agarivorans SA1 = DSM 21679   3 2
No Yes Bibersteinia trehalosi USDA-ARS-USMARC-192   4 1
No Yes Mannheimia haemolytica USMARC_2286   4 1
No Yes Mannheimia haemolytica M42548   4 1
No Yes Mannheimia haemolytica D174   4 1
No Yes Mannheimia haemolytica D171   4 1
No Yes Mannheimia haemolytica D153   4 1
No Yes Mannheimia haemolytica USDA-ARS-USMARC-183   4 1
No Yes Mannheimia haemolytica USDA-ARS-USMARC-185   4 1
No Yes Actinobacillus suis H91-0380   4 1
No Yes Actinobacillus pleuropneumoniae serovar 3 str. JL03   4 1
No Yes Actinobacillus pleuropneumoniae serovar 7 str. AP76   4 1
No Yes Aeromonas hydrophila ML09-119   1 1
No Yes Vibrio fischeri ES114   1 1
No Yes Vibrio sp. EJY3   1 1
No Yes Vibrio parahaemolyticus BB22OP   1 1
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   1 1
No Yes Vibrio anguillarum Listonella anguillarum M3   1 1
No Yes Vibrio nigripulchritudo VibrioScope   1 1
No Yes Vibrio vulnificus CMCP6   1 1
No Yes Vibrio vulnificus YJ016   1 1
No Yes Vibrio cholerae LMA3984-4   1 1
No Yes Vibrio cholerae M66-2   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Vibrio cholerae IEC224   1 1
No Yes Vibrio cholerae O1 str. 2010EL-1786   1 1
No Yes Vibrio cholerae MJ-1236   1 1
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   1 1
No Yes Idiomarina loihiensis GSL 199   3 2
No Yes Shewanella sp. W3-18-1   2 1
No Yes Shewanella sp. ANA-3   2 1
No Yes Shewanella baltica BA175   2 1
No Yes Shewanella baltica OS678   2 1
No Yes Shewanella baltica OS117   2 1
No Yes Shewanella baltica OS223   2 1
No Yes Shewanella baltica OS195   2 1
No Yes Shewanella baltica OS155   2 1
No Yes Shewanella sp. MR-7   2 1
No Yes Shewanella putrefaciens 200   2 1
No Yes Glaciecola psychrophila 170   3 2
No Yes Alteromonas macleodii str. 'Ionian Sea UM4b'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea UM7'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea U8'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea U7'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea U4'   1 1
No Yes Alteromonas macleodii str. 'Aegean Sea MED64'   1 1
No Yes Alteromonas macleodii str. 'English Channel 615'   1 1
No Yes Alteromonas macleodii AltDE1   1 1
No Yes Alteromonas macleodii str. 'English Channel 673'   1 1
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   1 1
No Yes Alteromonas macleodii str. 'Black Sea 11'   1 1
No Yes Alteromonas macleodii ATCC 27126   1 1
No Yes Thalassolituus oleivorans MIL-1   3 2
No Yes Proteus mirabilis BB2000   4 1
No Yes Morganella morganii subsp. morganii KT   4 1
No Yes Edwardsiella tarda C07-087   4 1
No Yes Edwardsiella tarda FL6-60   4 1
No Yes Rahnella aquatilis HX2   4 1
No Yes Yersinia pseudotuberculosis PB1/+   4 1
No Yes Yersinia pseudotuberculosis YPIII   4 1
No Yes Yersinia pseudotuberculosis IP 32953   4 1
No Yes Yersinia pestis biovar Microtus str. 91001   4 1
No Yes Yersinia pestis A1122   4 1
No Yes Yersinia pestis Z176003   4 1
No Yes Yersinia pestis D182038   4 1
No Yes Yersinia pestis D106004   4 1
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   4 1
No Yes Yersinia pestis Nepal516   4 1
No Yes Yersinia pestis Antiqua   4 1
No Yes Yersinia pestis Angola   4 1
No Yes Yersinia pestis CO92   4 1
No Yes Yersinia pestis KIM10+   4 1
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   4 1
No Yes Yersinia enterocolitica subsp. palearctica Y11   4 1
No Yes Serratia sp. AS13   4 1
No Yes Serratia plymuthica S13   4 1
No Yes Serratia plymuthica 4Rx13   4 1
No Yes Serratia marcescens FGI94   4 1
No Yes Serratia marcescens WW4   4 1
No Yes Serratia liquefaciens ATCC 27592   4 1
No Yes Dickeya dadantii Ech586   4 1
No Yes Dickeya dadantii 3937   4 1
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   4 1
No Yes Pantoea ananatis LMG 5342   4 1
No Yes Pantoea ananatis PA13   4 1
No Yes Pantoea ananatis AJ13355   4 1
No Yes Erwinia pyrifoliae DSM 12163   4 1
No Yes Erwinia amylovora CFBP1430   4 1
No Yes Cronobacter sakazakii CMCC 45402   4 1
No Yes Cronobacter sakazakii SP291   4 1
No Yes Cronobacter sakazakii ATCC BAA-894   4 1
No Yes Raoultella ornithinolytica B6   4 1
No Yes Shigella sonnei 53G   4 1
No Yes Shigella flexneri 2002017   4 1
No Yes Shigella flexneri 2a str. 2457T   4 1
No Yes Shigella flexneri 2a str. 301   4 1
No Yes Shigella dysenteriae 1617   4 1
No Yes Shigella boydii Sb227   4 1
No Yes Salmonella bongori N268-08   4 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   4 1
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   4 1
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   4 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   4 1
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   4 1
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   4 1
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   4 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   4 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   4 1
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   4 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   4 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   4 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   4 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   4 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   4 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   4 1
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   4 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   4 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   4 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   4 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   4 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   4 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   4 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   4 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   4 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   4 1
No Yes Salmonella enterica serovar Bovismorbificans genomics   4 1
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   4 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   4 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   4 1
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   5 2
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   4 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   4 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   4 1
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   4 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   4 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   4 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   4 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   4 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   4 1
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   4 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   4 1
No Yes Klebsiella oxytoca KCTC 1686   4 1
No Yes Klebsiella pneumoniae JM45   4 1
No Yes Klebsiella pneumoniae CG43   4 1
No Yes Klebsiella pneumoniae KCTC 2242   4 1
No Yes Klebsiella pneumoniae 342   4 1
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   4 1
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   4 1
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   4 1
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   4 1
No Yes Enterobacter aerogenes EA1509E   4 1
No Yes Escherichia coli E24377A   4 1
No Yes Escherichia coli E. coli PMV-1   4 1
No Yes Escherichia coli JJ1886   4 1
No Yes Escherichia coli LY180   4 1
No Yes Escherichia coli APEC O78   4 1
No Yes Escherichia coli O7:K1 str. CE10   4 1
No Yes Escherichia coli O104:H4 str. 2009EL-2050   4 1
No Yes Escherichia coli O104:H4 str. 2009EL-2071   4 1
No Yes Escherichia coli O104:H4 str. 2011C-3493   4 1
No Yes Escherichia coli NA114   4 1
No Yes Escherichia coli P12b   4 1
No Yes Escherichia coli str. 'clone D i2'   4 1
No Yes Escherichia coli str. 'clone D i14'   4 1
No Yes Escherichia coli UM146   4 1
No Yes Escherichia coli 042   4 1
No Yes Escherichia coli Xuzhou21   4 1
No Yes Escherichia coli IHE3034   4 1
No Yes Escherichia coli UMNK88   4 1
No Yes Escherichia coli O83:H1 str. NRG 857C   4 1
No Yes Escherichia coli ABU 83972   4 1
No Yes Escherichia coli KO11FL   4 1
No Yes Escherichia coli KO11FL   4 1
No Yes Escherichia coli LF82   4 1
No Yes Escherichia coli ED1a   4 1
No Yes Escherichia coli IAI39   4 1
No Yes Escherichia coli UMN026   4 1
No Yes Escherichia coli 55989   4 1
No Yes Escherichia coli S88   4 1
No Yes Escherichia coli IAI1   4 1
No Yes Escherichia coli W   4 1
No Yes Escherichia coli W   4 1
No Yes Escherichia coli DH1   4 1
No Yes Escherichia coli DH1   4 1
No Yes Escherichia coli ATCC 8739   4 1
No Yes Escherichia coli BL21(DE3)   4 1
No Yes Escherichia coli BL21(DE3)   4 1
No Yes Escherichia coli SMS-3-5   4 1
No Yes Escherichia coli SE15   4 1
No Yes Escherichia coli SE11   4 1
No Yes Escherichia coli APEC O1   4 1
No Yes Escherichia coli O103:H2 str. 12009   4 1
No Yes Escherichia coli UTI89   4 1
No Yes Escherichia coli 536   4 1
No Yes Escherichia coli HS   4 1
No Yes Escherichia coli ETEC H10407   4 1
No Yes Escherichia coli O55:H7 str. RM12579   4 1
No Yes Escherichia coli O55:H7 str. CB9615   4 1
No Yes Escherichia coli O26:H11 str. 11368   4 1
No Yes Escherichia coli CFT073   4 1
No Yes Escherichia coli O111:H- str. 11128   4 1
No Yes Escherichia coli O127:H6 str. E2348/69   4 1
No Yes Escherichia coli O157:H7 str. TW14359   4 1
No Yes Escherichia coli O157:H7 str. EC4115   4 1
No Yes Escherichia coli O157:H7 str. Sakai   4 1
No Yes Escherichia coli O157:H7 str. EDL933   4 1
No Yes Escherichia coli str. K-12 substr. MDS42   4 1
No Yes Escherichia coli BW2952   4 1
No Yes Escherichia coli str. K-12 substr. MG1655   4 1
No Yes Escherichia coli str. K-12 substr. W3110   4 1
No Yes Escherichia coli str. K-12 substr. DH10B   4 1
No Yes Escherichia coli B str. REL606   4 1
No Yes Enterobacter cloacae SCF1   4 1
No Yes Enterobacter cloacae EcWSU1   4 1
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   4 1
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   4 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   4 1
No Yes Azotobacter vinelandii CA6   1 1
No Yes Azotobacter vinelandii CA   1 1
No Yes Pseudomonas syringae pv. phaseolicola 1448A   1 1
No Yes Pseudomonas syringae pv. syringae B728a   1 1
No Yes Pseudomonas monteilii SB3101   1 1
No Yes Pseudomonas monteilii SB3078   1 1
No Yes Pseudomonas putida H8234   1 1
No Yes Pseudomonas putida HB3267   1 1
No Yes Pseudomonas putida NBRC 14164   1 1
No Yes Pseudomonas putida DOT-T1E   1 1
No Yes Pseudomonas putida S16   1 1
No Yes Pseudomonas putida BIRD-1   1 1
No Yes Pseudomonas putida W619   1 1
No Yes Pseudomonas putida ND6   1 1
No Yes Pseudomonas putida KT2440   1 1
No Yes Pseudomonas putida GB-1   1 1
No Yes Pseudomonas poae RE*1-1-14   1 1
No Yes Pseudomonas fluorescens R124   1 1
No Yes Pseudomonas fluorescens Pf0-1   1 1
No Yes Pseudomonas aeruginosa SCV20265   1 1
No Yes Pseudomonas aeruginosa MTB-1   1 1
No Yes Pseudomonas aeruginosa LES431   1 1
No Yes Pseudomonas aeruginosa RP73   1 1
No Yes Pseudomonas aeruginosa B136-33   1 1
No Yes Pseudomonas aeruginosa DK2   1 1
No Yes Pseudomonas aeruginosa NCGM2.S1   1 1
No Yes Pseudomonas aeruginosa LESB58   1 1
No Yes Pseudomonas aeruginosa PAO1   1 1
No Yes Acinetobacter genomosp. 13TU RUH2624   2 1
No Yes Acinetobacter sp. SH024   2 1
No Yes Acinetobacter calcoaceticus ruh2202   2 1
No Yes Acinetobacter baumannii ZW85-1   2 1
No Yes Acinetobacter baumannii TYTH-1   2 1
No Yes Acinetobacter baumannii BJAB0868   2 1
No Yes Acinetobacter baumannii BJAB0715   2 1
No Yes Acinetobacter baumannii BJAB07104   2 1
No Yes Acinetobacter baumannii TCDC-AB0715   2 1
No Yes Acinetobacter baumannii D1279779   2 1
No Yes Acinetobacter baumannii MDR-TJ   2 1
No Yes Acinetobacter baumannii 1656-2   2 1
No Yes Acinetobacter baumannii ATCC 19606   2 1
No Yes Acinetobacter baumannii AB307-0294   2 1
No Yes Acinetobacter baumannii AYE   2 1
No Yes Acinetobacter baumannii SDF   2 1
No Yes Acinetobacter baumannii MDR-ZJ06   2 1
No Yes Acinetobacter baumannii AB0057   2 1
No Yes Acinetobacter baumannii ACICU   2 1
No Yes Acinetobacter radioresistens SH164   2 1
No Yes Acinetobacter junii SH205   2 1
No Yes Acinetobacter johnsonii SH046   2 1
No Yes Acinetobacter lwoffii SH145   2 1
No Yes Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 34 23
No Yes Homo sapiens (NCBI version) Human 18 11
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 11 7
No Yes Heliconius numata (Incomplete)   4 3
No Yes Loa loa v3.3 (Request) Eye worm 8 5
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 5 4
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 8 5
No Yes Moniliophthora perniciosa FA553 (Genome survey)   1 1
No Yes Encephalitozoon intestinalis (endoparasite)   1 1
No Yes Encephalitozoon cuniculi (endoparasite)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Lotus japonicus (Early assembly)   5 4
No Yes Malus x domestica (Duplicate) Apple 37 18
No Yes Ricinus communis (Early assembly) Castor bean 13 8
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   29 14
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 14 7
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 14 7
No Yes Phoenix dactylifera (Early draft) Date palm 7 7
No Yes Mycobacterium tuberculosis H37Rv (Duplicate of ex)   1 1
No Yes Wolbachia endosymbiont of Brugia malayi v1.0 (Broad Institute)   1 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   1 1
No Yes Homo sapiens 69_37 Human 12 7
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 12 8
No Yes Gorilla gorilla 69_3.1 Western gorilla 12 7
No Yes Pongo abelii 69_2 Sumatran orangutan 12 7
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 11 7
No Yes Macaca mulatta 69_1 Rhesus monkey 13 8
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 14 8
No Yes Otolemur garnettii 69_3 Small-eared galago 17 10
No Yes Microcebus murinus 69_1 Gray mouse lemur 8 5
No Yes Rattus norvegicus 69_3.4 Norway rat 11 7
No Yes Mus musculus 69_38 House mouse 11 7
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 3 3
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 12 7
No Yes Cavia porcellus 69_3 Domestic guinea pig 12 7
No Yes Oryctolagus cuniculus 69_2 Rabbit 12 7
No Yes Ochotona princeps 69 American pika 9 6
No Yes Tupaia belangeri 69 Northern tree shrew 10 7
No Yes Sus scrofa 69_10.2 Pig 12 8
No Yes Bos taurus 69_3.1 Cattle 11 7
No Yes Vicugna pacos 69_1 Alpaca 9 6
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 12 7
No Yes Mustela putorius furo 69_1.0 Domestic ferret 10 7
No Yes Ailuropoda melanoleuca 69_1 Giant panda 11 7
No Yes Canis familiaris 69_3.1 Dog 11 7
No Yes Felis catus 69 Domestic cat 8 4
No Yes Equus caballus 69_2 Horse 12 7
No Yes Myotis lucifugus 69_2.0 Little brown bat 13 8
No Yes Pteropus vampyrus 69_1 Large flying fox 11 7
No Yes Sorex araneus 69_1 European shrew 7 5
No Yes Erinaceus europaeus 69 Western European hedgehog 10 5
No Yes Procavia capensis 69_1 Cape rock hyrax 10 6
No Yes Loxodonta africana 69_3 African savanna elephant 12 7
No Yes Echinops telfairi 69 Small Madagascar hedgehog 10 6
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 10 5
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 8 5
No Yes Macropus eugenii 69_1.0 Tammar wallaby 9 6
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 13 8
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 12 7
No Yes Ornithorhynchus anatinus 69_5 Platypus 11 8
No Yes Petromyzon marinus 69_7.0 Sea lamprey 7 5
No Yes Meleagris gallopavo 69_2 Turkey 12 8
No Yes Gallus gallus 69_2 Chicken 12 7
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 12 7
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 11 7
No Yes Anolis carolinensis 69_2.0 Green anole 13 8
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 12 7
No Yes Latimeria chalumnae 69_1 Coelacanth 8 6
No Yes Gadus morhua 69_1 Atlantic cod 13 8
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 14 9
No Yes Takifugu rubripes 69_4 Torafugu 15 9
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 17 10
No Yes Oryzias latipes 69_1 Japanese medaka 16 10
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 9 6
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 15 9
No Yes Danio rerio 69_9 Zebrafish 15 9
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 5 4
No Yes Ciona intestinalis 69 Vase tunicate 8 5
No Yes Drosophila melanogaster 69_5 Fruit fly 9 7
No Yes Caenorhabditis elegans 69_215 Roundworm 12 9
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 10 6
No Yes Arabidopsis thaliana 10 Thale cress 17 8
No Yes 1_050719N (meta-genome)   3 3
No Yes 2_050719S (meta-genome)   4 3
No Yes 2_Base_of_chrolophyll_max (meta-genome)   1 1
No Yes 3_050719R (meta-genome)   6 6
No Yes 4_050719Q (meta-genome)   28 23
No Yes 5_050719P (meta-genome)   25 18
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   3 3
No Yes 7_Oxygen_minimum_layer (meta-genome)   2 2
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   2 2
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   2 2
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   33 21
No Yes Bath Hot Springs, planktonic community (meta-genome)   3 3
No Yes Combined (meta-genome)   49 39
No Yes Core Eukaryotic Genes 458 (CEGMA)   29 18
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   54 38
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   13 10
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   16 9
No Yes Dump bottom (Dump bottom) (meta-genome)   8 8
No Yes Dump top (Dump top) (meta-genome)   12 12
No Yes Endophytic microbiome from Rice (meta-genome)   3 3
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   3 3
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   7 6
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   6 6
No Yes Fungus garden combined (combined) (meta-genome)   42 31
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   65 48
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   77 56
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   10 8
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   37 33
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   13 12
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   12 10
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   9 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   12 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   6 3
No Yes Human Gut Community Subject 7 (meta-genome)   6 5
No Yes Human Gut Community Subject 8 (meta-genome)   9 6
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   14 13
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   22 20
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   12 11
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   1 1
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   5 3
No Yes NCBI 2017_08 genome   137164 61169
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   22 21
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   3 2
No Yes Olavius algarvensis endosymbiont metagenome Delta4 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   188 133
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   12 12
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   8 8
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   14 14
No Yes Sludge/US, Jazz Assembly (meta-genome)   1 1
No Yes Sludge/US, Phrap Assembly (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   15 15
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   13 13
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   8 8
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   6 6
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   6 6
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   5 5
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   8 8
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   22 16
No Yes STRING v9.0.5 (STRING)   2304 1408
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   2 2
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   3 3
No Yes Termite Protist Endosymbiont Community (meta-genome)   8 5
No Yes Uniprot 2018_03 genome   37804 24833
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   19 16
No Yes Global Ocean Sampling Expedition (GOS)   684 643
No Yes NCBI plasmid sequences (Plasmids)   2 2
No Yes NCBI viral sequences (Viral)   3 3
No Yes PDB chains (SCOP 1.75) (PDB)   38 17
No Yes Protein Data Bank (all PDB sequenc)   293 223
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1197 1197
No Yes TargetDB (Targets)   65 42
No Yes The Salmonella enterica Pan-genome (meta-genome)   124 31
No Yes UniProt viral sequences (Viral)   1 1

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