SUPERFAMILY 1.75 HMM library and genome assignments server

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Tudor/PWWP/MBT superfamily domain assignments
in
Archaeoglobus fulgidus DSM 4304


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Select to display   Genome       Domains   Proteins
No Yes ALL   181514 181514
No Yes Homo sapiens 76_38 Human 465 315
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 111 63
No Yes Gorilla gorilla 76_3.1 Western gorilla 163 91
No Yes Pongo abelii 76_2 Sumatran orangutan 102 66
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 110 65
No Yes Papio anubis 76 Olive baboon 126 74
No Yes Macaca mulatta 76_1 Rhesus monkey 203 124
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 287 181
No Yes Otolemur garnettii 76_3 Small-eared galago 121 66
No Yes Microcebus murinus 76_1 Gray mouse lemur 86 51
No Yes Rattus norvegicus 76_5.0 Norway rat 131 73
No Yes Mus musculus 76_38 House mouse 312 194
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 96 57
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 129 73
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 114 69
No Yes Cavia porcellus 76_3 Domestic guinea pig 107 62
No Yes Oryctolagus cuniculus 76_2 Rabbit 121 69
No Yes Ochotona princeps 76 American pika 92 54
No Yes Tupaia belangeri 76 Northern tree shrew 89 50
No Yes Sus scrofa 76_10.2 Pig 120 77
No Yes Bos taurus 76_3.1 Cattle 113 68
No Yes Ovis aries 76_3.1 Sheep 135 79
No Yes Vicugna pacos 76_1 Alpaca 67 39
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 112 61
No Yes Mustela putorius furo 76_1.0 Domestic ferret 117 64
No Yes Ailuropoda melanoleuca 76_1 Giant panda 127 75
No Yes Canis familiaris 76_3.1 Dog 167 91
No Yes Felis catus 76_6.2 Domestic cat 118 67
No Yes Equus caballus 76_2 Horse 115 72
No Yes Myotis lucifugus 76_2.0 Little brown bat 114 68
No Yes Pteropus vampyrus 76_1 Large flying fox 102 58
No Yes Sorex araneus 76_1 European shrew 85 49
No Yes Erinaceus europaeus 76 Western European hedgehog 82 48
No Yes Procavia capensis 76_1 Cape rock hyrax 87 52
No Yes Loxodonta africana 76_3 African savanna elephant 157 92
No Yes Echinops telfairi 76 Small Madagascar hedgehog 89 57
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 116 73
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 77 45
No Yes Macropus eugenii 76_1.0 Tammar wallaby 91 52
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 143 78
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 113 64
No Yes Ornithorhynchus anatinus 76_5 Platypus 105 70
No Yes Saccoglossus kowalevskii v3.0   125 74
No Yes Petromyzon marinus 76_7.0 Sea lamprey 65 39
No Yes Meleagris gallopavo 76_2 Turkey 121 63
No Yes Gallus gallus 76_4 Chicken 111 63
No Yes Anas platyrhynchos 76_1.0 Mallard 118 61
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 106 61
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 104 58
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 125 66
No Yes Anolis carolinensis 76_2.0 Green anole 113 62
No Yes Xenopus laevis African clawed frog 139 85
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 130 77
No Yes Latimeria chalumnae 76_1 Coelacanth 134 77
No Yes Lepisosteus oculatus 76 Spotted gar 162 95
No Yes Gadus morhua 76_1 Atlantic cod 109 66
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 126 71
No Yes Takifugu rubripes 76_4 Torafugu 365 215
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 126 74
No Yes Oryzias latipes 76_1 Japanese medaka 109 64
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 122 67
No Yes Poecilia formosa 76 Amazon molly 129 71
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 191 98
No Yes Astyanax mexicanus 76 Mexican tetra 152 82
No Yes Danio rerio 76_9 Zebrafish 271 148
No Yes Oikopleura dioica   39 28
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 49 39
No Yes Ciona intestinalis 76 Vase tunicate 38 31
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 65 44
No Yes Adineta vaga   138 96
No Yes Octopus bimaculoides 280   113 80
No Yes Crassostrea gigas 22 Pacific oyster 82 41
No Yes Lottia gigantea Owl limpet 85 44
No Yes Helobdella robusta   53 37
No Yes Capitella sp. I   80 42
No Yes Danaus plexippus OGS1.0 Monarch butterfly 63 35
No Yes Heliconius melpomene Postman butterfly 63 35
No Yes Bombyx mori Domestic silkworm 48 28
No Yes Nasonia vitripennis Jewel wasp 33 22
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 66 42
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 68 41
No Yes Linepithema humile v1.1 Argentine ant 54 36
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 58 32
No Yes Solenopsis invicta v.2.2.3 Red fire ant 70 39
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 66 37
No Yes Atta cephalotes v1.1   56 36
No Yes Camponotus floridanus v3.3 Florida carpenter ant 66 37
No Yes Lucilia cuprina Australian sheep blowfly 54 28
No Yes Drosophila grimshawi 1.3   59 37
No Yes Drosophila willistoni 1.3   63 37
No Yes Drosophila pseudoobscura 2.13   67 40
No Yes Drosophila persimilis 1.3   61 36
No Yes Drosophila suzukii   56 33
No Yes Drosophila yakuba 1.3   56 32
No Yes Drosophila simulans 1.3   50 31
No Yes Drosophila sechellia 1.3   60 35
No Yes Drosophila melanogaster 76_5 Fruit fly 103 61
No Yes Drosophila erecta 1.3   56 33
No Yes Drosophila ananassae 1.3   57 32
No Yes Drosophila virilis 1.2   60 35
No Yes Drosophila mojavensis 1.3   56 33
No Yes Megaselia scalaris 22   12 11
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 57 34
No Yes Culex pipiens quinquefasciatus Southern house mosquito 62 42
No Yes Anopheles darlingi 22 American malaria mosquito 47 31
No Yes Anopheles gambiae 49_3j African malaria mosquito 49 31
No Yes Tribolium castaneum 3.0 Red flour beetle 59 33
No Yes Pediculus humanus corporis (Early assembly) Human body louse 49 30
No Yes Acyrthosiphon pisum Pea aphid 69 37
No Yes Rhodnius prolixus 22   51 33
No Yes Daphnia pulex Common water flea 145 73
No Yes Strigamia maritima 22   67 37
No Yes Sarcoptes scabiei   24 18
No Yes Tetranychus urticae Two-spotted spider mite 56 39
No Yes Ixodes scapularis (Preliminary) Black-legged tick 55 38
No Yes Pristionchus pacificus   22 14
No Yes Meloidogyne incognita Southern root-knot nematode 14 14
No Yes Meloidogyne hapla   9 6
No Yes Onchocerca volvulus 22   35 24
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 49 36
No Yes Caenorhabditis japonica   20 15
No Yes Caenorhabditis brenneri   33 23
No Yes Caenorhabditis remanei   33 20
No Yes Caenorhabditis elegans 76_235 Roundworm 41 23
No Yes Caenorhabditis briggsae 2   37 20
No Yes Trichinella spiralis 22   19 19
No Yes Hymenolepis microstoma   22 18
No Yes Echinococcus multilocularis   20 14
No Yes Echinococcus granulosus   20 14
No Yes Taenia solium Pork tapeworm 20 15
No Yes Schistosoma mansoni   29 20
No Yes Mnemiopsis leidyi Sea walnut 51 33
No Yes Thelohanellus kitauei   3 2
No Yes Acropora digitifera v1.0   63 42
No Yes Nematostella vectensis 1.0 Starlet sea anemone 78 39
No Yes Hydra vulgaris   53 32
No Yes Amphimedon queenslandica   58 34
No Yes Trichoplax adhaerens   27 20
No Yes Proterospongia sp. ATCC 50818   13 11
No Yes Monosiga brevicollis   15 14
No Yes Sphaeroforma arctica JP610   6 6
No Yes Capsaspora owczarzaki ATCC 30864   15 13
No Yes Conidiobolus coronatus NRRL28638 v1.0   4 4
No Yes Mortierella verticillata NRRL 6337   9 8
No Yes Phycomyces blakesleeanus   5 5
No Yes Rhizopus oryzae RA 99-880   6 6
No Yes Mucor circinelloides   6 6
No Yes Rhizomucor miehei CAU432   5 5
No Yes Malassezia globosa CBS 7966   4 4
No Yes Sporisorium reilianum 22   4 4
No Yes Ustilago maydis   3 3
No Yes Mixia osmundae IAM 14324 v1.0   4 4
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   5 5
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   5 5
No Yes Melampsora laricis-populina   4 4
No Yes Rhodotorula graminis WP1 v1.0   5 5
No Yes Sporobolomyces roseus IAM 13481   5 5
No Yes Microbotryum violaceum 22   5 5
No Yes Wallemia sebi v1.0   4 4
No Yes Sphaerobolus stellatus v1.0   5 5
No Yes Piloderma croceum F 1598 v1.0   6 6
No Yes Serpula lacrymans var. lacrymans S7.9   3 3
No Yes Coniophora puteana   4 4
No Yes Hydnomerulius pinastri v2.0   5 5
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   5 5
No Yes Pisolithus microcarpus 441 v1.0   3 3
No Yes Pisolithus tinctorius Marx 270 v1.0   5 5
No Yes Scleroderma citrinum Foug A v1.0   6 6
No Yes Coprinopsis cinerea okayama7 130 v3   5 5
No Yes Pleurotus ostreatus Oyster mushroom 4 4
No Yes Amanita thiersii Skay4041 v1.0   6 6
No Yes Amanita muscaria Koide v1.0 Fly agaric 6 6
No Yes Galerina marginata v1.0   5 5
No Yes Hebeloma cylindrosporum h7 v2.0   5 5
No Yes Laccaria bicolor S238N-H82   12 12
No Yes Agaricus bisporus var. bisporus   5 5
No Yes Schizophyllum commune   3 3
No Yes Stereum hirsutum FP-91666 SS1 v1.0   4 4
No Yes Heterobasidion annosum   4 4
No Yes Gloeophyllum trabeumv1.0   4 4
No Yes Punctularia strigosozonata v1.0   5 5
No Yes Sebacina vermifera MAFF 305830 v1.0   5 5
No Yes Fomitiporia mediterranea v1.0   4 4
No Yes Tulasnella calospora AL13/4D v1.0   5 5
No Yes Postia placenta   10 10
No Yes Wolfiporia cocos MD-104 SS10 v1.0   5 5
No Yes Fomitopsis pinicolav1.0   5 5
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   5 5
No Yes Phanerochaete chrysosporium RP-78 2.1   3 3
No Yes Dichomitus squalens   4 4
No Yes Trametes versicolor v1.0   5 5
No Yes Tremella mesenterica Witches' butter 4 4
No Yes Daldinia eschscholzii EC12 v1.0   3 3
No Yes Apiospora montagnei NRRL 25634 v1.0   3 3
No Yes Magnaporthe poae ATCC 64411 22   2 2
No Yes Magnaporthe grisea 70-15   3 3
No Yes Podospora anserina   2 2
No Yes Sporotrichum thermophile ATCC 42464   3 3
No Yes Thielavia terrestris NRRL 8126   3 3
No Yes Chaetomium globosum CBS 148.51   3 3
No Yes Neurospora tetrasperma   3 3
No Yes Neurospora discreta FGSC 8579   3 3
No Yes Neurospora crassa OR74A   3 3
No Yes Cryphonectria parasitica Chestnut blight fungus 3 3
No Yes Verticillium albo-atrum VaMs.102   2 2
No Yes Verticillium dahliae VdLs.17   3 3
No Yes Acremonium alcalophilumv 1.0   3 3
No Yes Glomerella graminicola 22   3 3
No Yes Fusarium graminearum   3 3
No Yes Nectria haematococca mpVI   3 3
No Yes Fusarium oxysporum f. sp. lycopersici 4286   3 3
No Yes Fusarium verticillioides 7600   3 3
No Yes Trichoderma asperellum CBS 433.97 v1.0   3 3
No Yes Trichoderma atroviride   2 2
No Yes Trichoderma citrinoviride v1.0   2 2
No Yes Trichoderma reesei 1.2   3 3
No Yes Trichoderma virens Gv29-8   3 3
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   2 2
No Yes Trichoderma harzianum CBS 226.95 v1.0   3 3
No Yes Amorphotheca resinae v1.0 Creosote fungus 3 3
No Yes Botrytis cinerea B05.10   3 3
No Yes Sclerotinia sclerotiorum   3 3
No Yes Blumeria graminis 22   3 3
No Yes Didymella exigua CBS 183.55 v1.0   3 3
No Yes Leptosphaeria maculans 22   3 3
No Yes Setosphaeria turcica v1.0   4 4
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   3 3
No Yes Cochliobolus victoriae FI3 v1.0   4 4
No Yes Cochliobolus carbonum 26-R-13 v1.0   4 4
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 3 3
No Yes Alternaria brassicicola   3 3
No Yes Cochliobolus lunatus m118 v2.0   4 4
No Yes Pyrenophora teres f. teres 22   3 3
No Yes Pyrenophora tritici-repentis   4 4
No Yes Stagonospora nodorum   3 3
No Yes Mycosphaerella graminicola IPO323   3 3
No Yes Zasmidium cellare ATCC 36951 v1.0   4 4
No Yes Dothistroma septosporum   3 3
No Yes Septoria musiva v1.0   3 3
No Yes Mycosphaerella fijiensis CIRAD86   2 2
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   4 4
No Yes Paracoccidioides brasiliensis Pb18   3 3
No Yes Coccidioides posadasii RMSCC 3488   3 3
No Yes Coccidioides immitis RS   4 4
No Yes Ajellomyces dermatitidis SLH14081   3 3
No Yes Histoplasma capsulatum class NAmI strain WU24   3 3
No Yes Microsporum canis CBS 113480   3 3
No Yes Trichophyton equinum CBS 127.97   3 3
No Yes Trichophyton verrucosum HKI 0517   3 3
No Yes Arthroderma benhamiae CBS 112371   3 3
No Yes Trichophyton tonsurans CBS 112818   3 3
No Yes Trichophyton rubrum CBS 118892   3 3
No Yes Uncinocarpus reesii 1704   3 3
No Yes Aspergillus zonatus v1.0   3 3
No Yes Penicillium chrysogenum Wisconsin 54-1255   3 3
No Yes Penicillium chrysogenum v1.0   3 3
No Yes Aspergillus acidus v1.0   3 3
No Yes Aspergillus fumigatus Af293   3 3
No Yes Aspergillus brasiliensis v1.0   3 3
No Yes Aspergillus nidulans FGSC A4   3 3
No Yes Aspergillus sydowii v1.0   3 3
No Yes Aspergillus versicolor v1.0   3 3
No Yes Aspergillus glaucus   3 3
No Yes Aspergillus carbonarius ITEM 5010   3 3
No Yes Neosartorya fischeri NRRL 181   3 3
No Yes Aspergillus terreus NIH2624   3 3
No Yes Aspergillus tubingensis v1.0   3 3
No Yes Aspergillus wentii v1.0   3 3
No Yes Aspergillus oryzae RIB40   3 3
No Yes Aspergillus niger 22   3 3
No Yes Aspergillus niger ATCC 1015   3 3
No Yes Aspergillus flavus NRRL3357   3 3
No Yes Aspergillus clavatus NRRL 1   3 3
No Yes Penicillium marneffei ATCC 18224   3 3
No Yes Tuber melanosporum Mel28 22   3 3
No Yes Tuber melanosporum Vittad Perigord truffle 3 3
No Yes Hansenula polymorpha v2.0   2 2
No Yes Dekkera bruxellensis CBS 2499 v2.0   2 2
No Yes Pichia membranifaciensv1.0   2 2
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   3 3
No Yes Candida dubliniensis CD36   3 3
No Yes Candida tropicalis MYA-3404   3 3
No Yes Candida parapsilosis   3 3
No Yes Candida albicans SC5314   3 3
No Yes Lodderomyces elongisporus NRRL YB-4239   3 3
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   3 3
No Yes Pichia stipitis CBS 6054   3 3
No Yes Candida guilliermondii ATCC 6260   3 3
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   3 3
No Yes Debaromyces hansenii   3 3
No Yes Wickerhamomyces anomalus   1 1
No Yes Pichia pastoris GS115   3 3
No Yes Yarrowia lipolytica CLIB122   2 2
No Yes Candida lusitaniae ATCC 42720   3 3
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   3 3
No Yes Vanderwaltozyma polyspora DSM 70294   3 3
No Yes Candida glabrata CBS138   3 3
No Yes Kluyveromyces thermotolerans CBS 6340   3 3
No Yes Lachancea kluyveri   2 2
No Yes Kluyveromyces waltii   2 2
No Yes Ashbya gossypii ATCC 10895   3 3
No Yes Zygosaccharomyces rouxii   2 2
No Yes Saccharomyces mikatae MIT   2 2
No Yes Saccharomyces paradoxus MIT   2 2
No Yes Saccharomyces cerevisiae 76 Baker's yeast 2 2
No Yes Saccharomyces bayanus MIT   2 2
No Yes Kluyveromyces lactis   2 2
No Yes Schizosaccharomyces cryophilus OY26 22   5 5
No Yes Schizosaccharomyces octosporus yFS286   5 5
No Yes Schizosaccharomyces japonicus yFS275   5 5
No Yes Schizosaccharomyces pombe Fission yeast 5 5
No Yes Catenaria anguillulae PL171 v1.0   4 4
No Yes Allomyces macrogynus ATCC 38327   8 8
No Yes Spizellomyces punctatus DAOM BR117   8 8
No Yes Dictyostelium discoideum   6 6
No Yes Dictyostelium purpureum   4 4
No Yes Entamoeba dispar 1.2   2 2
No Yes Entamoeba invadens 1.2   4 4
No Yes Entamoeba histolytica 1   2 2
No Yes Selaginella moellendorffii   15 15
No Yes Pinus taeda Loblolly pine 20 20
No Yes Picea abies Norway spruce 13 13
No Yes Eucalyptus grandis v201 Rose gum 48 45
No Yes Theobroma cacao B97-61/B2 v1 Cacao 26 25
No Yes Gossypium raimondii v221   110 110
No Yes Citrus clementina v165   47 45
No Yes Citrus sinensis v154 Sweet orange 80 79
No Yes Thellungiella halophila v173   36 35
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 43 43
No Yes Capsella rubella v183   42 41
No Yes Arabidopsis lyrata Lyrate rockcress 29 28
No Yes Arabidopsis thaliana 10 Thale cress 48 47
No Yes Carica papaya Papaya 17 17
No Yes Medicago truncatula Barrel medic 52 51
No Yes Phaseolus vulgaris v186 French bean 36 36
No Yes Glycine max v109 Soybean 76 76
No Yes Cucumis sativus v122 Cucumber 38 38
No Yes Fragaria vesca Wild strawberry 27 27
No Yes Malus domestica v196 Apple 43 43
No Yes Prunus persica v139 Peach 21 20
No Yes Linum usitatissimum v200 Flax 46 46
No Yes Manihot esculenta v147 Cassava 32 32
No Yes Populus trichocarpa v156 Black cottonwood 43 42
No Yes Vitis vinifera Wine grape 25 24
No Yes Mimulus guttatus v140 Spotted monkey flower 22 21
No Yes Solanum lycopersicum v.2.3 Tomato 32 28
No Yes Solanum tuberosum Potato 24 24
No Yes Actinidia chinensis Hongyang   33 33
No Yes Aquilegia coerulea v195   76 75
No Yes Triticum urartu 22   20 20
No Yes Triticum aestivum 22 Bread wheat 46 44
No Yes Aegilops tauschii 22   22 21
No Yes Brachypodium distachyon Stiff brome 43 42
No Yes Oryza barthii 22 African wild rice 37 31
No Yes Oryza meridionalis 22   32 32
No Yes Oryza glumaepatula 22   45 44
No Yes Oryza glaberrima African rice 29 28
No Yes Oryza punctata 22   43 39
No Yes Oryza nivara 22   47 43
No Yes Oryza brachyantha 22 Malo sina 24 23
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 41 40
No Yes Oryza sativa v193 Rice 39 38
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 42 40
No Yes Panicum virgatum v202 Switchgrass 56 55
No Yes Setaria italica v164 Foxtail millet 40 38
No Yes Zea mays subsp. mays Maize 51 50
No Yes Zea mays v181 Maize 63 59
No Yes Sorghum bicolor Sorghum 27 26
No Yes Musa balbisiana Balbis banana 43 43
No Yes Musa acuminata 22 Wild Malaysian banana 39 39
No Yes Amborella trichopoda 22   20 19
No Yes Physcomitrella patens   14 13
No Yes Coccomyxa subellipsoidea sp. C-169 v2   13 9
No Yes Asterochloris sp. Cgr/DA1pho v1.0   7 7
No Yes Chlorella variabilis sp. NC64A   11 11
No Yes Chlorella vulgaris   11 9
No Yes Volvox carteri f. nagariensis   9 7
No Yes Volvox carteri v199   9 7
No Yes Chlamydomonas reinhardtii 4.0   11 9
No Yes Ostreococcus sp. RCC809   10 8
No Yes Ostreococcus lucimarinus CCE9901   11 9
No Yes Ostreococcus tauri   9 8
No Yes Bathycoccus prasinos   9 9
No Yes Micromonas sp. RCC299   10 10
No Yes Micromonas pusilla CCMP1545 v3.0   13 13
No Yes Cyanidioschyzon merolae strain 10D 22   3 3
No Yes Cyanidioschyzon merolae   3 3
No Yes Porphyridium purpureum 02_2012   14 14
No Yes Thecamonas trahens ATCC 50062   7 7
No Yes Bigelowiella natans CCMP2755 22   36 32
No Yes Cyanophora paradoxa   6 6
No Yes Leishmania mexicana 2.4   4 4
No Yes Leishmania major strain Friedlin   4 4
No Yes Leishmania infantum JPCM5 2.4   4 4
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   4 4
No Yes Trypanosoma vivax   5 5
No Yes Trypanosoma cruzi strain CL Brener   3 3
No Yes Trypanosoma congolense 2.4   5 5
No Yes Trypanosoma brucei gambiense v4.1   2 2
No Yes Trypanosoma brucei TREU927 v4.1   2 2
No Yes Ectocarpus siliculosus   14 13
No Yes Aureococcus anophagefferens   23 12
No Yes Albugo laibachii 22   11 11
No Yes Pythium iwayamai DAOM BR242034 22   16 14
No Yes Pythium arrhenomanes ATCC 12531 22   16 13
No Yes Pythium ultimum v1.7-2   21 19
No Yes Pythium aphanidermatum DAOM BR444 22   14 13
No Yes Pythium irregulare DAOM BR486 22   19 17
No Yes Pythium vexans DAOM BR484 22   22 19
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 17 16
No Yes Phytophthora sojae 1.1   21 16
No Yes Phytophthora infestans T30-4   18 16
No Yes Phytophthora capsici   11 10
No Yes Hyaloperonospora arabidopsidis 22   9 8
No Yes Phaeodactylum tricornutumCCAP 1055/1   6 6
No Yes Fragilariopsis cylindrus   11 11
No Yes Thalassiosira pseudonana CCMP1335   1 1
No Yes Paramecium tetraurelia   17 17
No Yes Tetrahymena thermophila SB210 1   7 6
No Yes Ichthyophthirius multifiliis strain G5   8 7
No Yes Cryptosporidium hominis   2 2
No Yes Cryptosporidium muris   1 1
No Yes Cryptosporidium parvum Iowa II   1 1
No Yes Neospora caninum   4 4
No Yes Toxoplasma gondii VEG   4 4
No Yes Toxoplasma gondii ME49   4 4
No Yes Toxoplasma gondii GT1   4 4
No Yes Babesia bovis T2Bo   2 2
No Yes Theileria parva   1 1
No Yes Theileria annulata   1 1
No Yes Plasmodium falciparum 3D7   2 2
No Yes Plasmodium vivax SaI-1 7.0   2 2
No Yes Plasmodium knowlesi strain H   2 2
No Yes Plasmodium yoelii ssp. yoelii 1   2 2
No Yes Plasmodium chabaudi   2 2
No Yes Plasmodium berghei ANKA   2 2
No Yes Symbiodinium minutum clade B1 v1.2   12 10
No Yes Naegleria gruberi   2 2
No Yes Trichomonas vaginalis   5 5
No Yes Guillardia theta CCMP2712 v1.0   15 15
No Yes Emiliania huxleyi CCMP1516   25 23
No Yes Pirellula staleyi DSM 6068   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 206 128
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 91 52
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 61 40
No Yes Ascaris suum Victoria/Ghent Pig roundworm 33 26
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 35 20
No Yes Cryptococcus neoformans var. grubii H99   3 3
No Yes Cryptococcus neoformans B-3501A   3 3
No Yes Cryptococcus neoformans JEC21   5 5
No Yes Paracoccidioides brasiliensis Pb01   3 3
No Yes Paracoccidioides brasiliensis Pb03   3 3
No Yes Coccidioides posadasii str. Silveira   3 3
No Yes Coccidioides immitis RMSCC 3703   2 2
No Yes Coccidioides immitis RMSCC 2394   3 3
No Yes Coccidioides immitis H538.4   3 3
No Yes Ajellomyces dermatitidis ER-3   3 3
No Yes Histoplasma capsulatum H143   3 3
No Yes Histoplasma capsulatum H88   3 3
No Yes Histoplasma capsulatum G186AR   3 3
No Yes Aspergillus fumigatus A1163   3 3
No Yes Candida albicans WO-1   2 2
No Yes Saccharomyces cerevisiae UC5   2 2
No Yes Saccharomyces cerevisiae PW5   1 1
No Yes Saccharomyces cerevisiae FL100   1 1
No Yes Saccharomyces cerevisiae CLIB382   1 1
No Yes Saccharomyces cerevisiae CLIB324   1 1
No Yes Saccharomyces cerevisiae CBS7960   1 1
No Yes Saccharomyces cerevisiae YJM269   2 2
No Yes Saccharomyces cerevisiae T7   2 2
No Yes Saccharomyces cerevisiae FostersB   2 2
No Yes Saccharomyces cerevisiae VL3   2 2
No Yes Saccharomyces cerevisiae Vin13   2 2
No Yes Saccharomyces cerevisiae LalvinQA23   2 2
No Yes Saccharomyces cerevisiae AWRI796   1 1
No Yes Saccharomyces cerevisiae Sigma1278b   2 2
No Yes Saccharomyces cerevisiae W303   2 2
No Yes Saccharomyces cerevisiae JAY291   2 2
No Yes Saccharomyces cerevisiae AWRI1631   2 2
No Yes Saccharomyces cerevisiae YPS163   1 1
No Yes Saccharomyces cerevisiae M22   1 1
No Yes Saccharomyces cerevisiae T73   2 2
No Yes Saccharomyces cerevisiae CLIB215   2 2
No Yes Saccharomyces cerevisiae Y10   2 2
No Yes Saccharomyces cerevisiae YJM789   2 2
No Yes Saccharomyces cerevisiae YJM789   2 2
No Yes Saccharomyces cerevisiae RM11-1a   2 2
No Yes Saccharomyces cerevisiae RM11-1a   2 2
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 2 2
No Yes Schizosaccharomyces pombe 972h-   5 5
No Yes Batrachochytrium dendrobatidis JEL423   3 3
No Yes Batrachochytrium dendrobatidis JAM81   4 4
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 27 26
No Yes Hordeum vulgare 22 Domesticated barley 68 68
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 27 27
No Yes Trypanosoma brucei Lister 427 v4.1   2 2
No Yes Neospora caninum Nc-Liverpool 6.2   4 4
No Yes Plasmodium falciparum HB3   1 1
No Yes Plasmodium falciparum Dd2   1 1
No Yes Prochlorococcus marinus str. MIT 9211   2 2
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   1 1
No Yes Acinetobacter baumannii BJAB0868   1 1
No Yes Acinetobacter baumannii AB0057   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 493 332
No Yes Homo sapiens (NCBI version) Human 226 144
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 111 66
No Yes Heliconius numata (Incomplete)   12 12
No Yes Loa loa v3.3 (Request) Eye worm 39 29
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 36 25
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 36 26
No Yes Moniliophthora perniciosa FA553 (Genome survey)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 2 2
No Yes Lotus japonicus (Early assembly)   15 15
No Yes Malus x domestica (Duplicate) Apple 43 43
No Yes Ricinus communis (Early assembly) Castor bean 20 20
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   46 46
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 30 26
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 32 28
No Yes Phoenix dactylifera (Early draft) Date palm 18 18
No Yes Homo sapiens 69_37 Human 129 76
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 111 63
No Yes Gorilla gorilla 69_3.1 Western gorilla 115 63
No Yes Pongo abelii 69_2 Sumatran orangutan 97 63
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 98 58
No Yes Macaca mulatta 69_1 Rhesus monkey 113 65
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 123 70
No Yes Otolemur garnettii 69_3 Small-eared galago 115 65
No Yes Microcebus murinus 69_1 Gray mouse lemur 86 51
No Yes Rattus norvegicus 69_3.4 Norway rat 108 63
No Yes Mus musculus 69_38 House mouse 110 66
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 96 57
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 109 63
No Yes Cavia porcellus 69_3 Domestic guinea pig 106 61
No Yes Oryctolagus cuniculus 69_2 Rabbit 111 63
No Yes Ochotona princeps 69 American pika 92 54
No Yes Tupaia belangeri 69 Northern tree shrew 89 50
No Yes Sus scrofa 69_10.2 Pig 98 63
No Yes Bos taurus 69_3.1 Cattle 102 61
No Yes Vicugna pacos 69_1 Alpaca 67 39
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 112 61
No Yes Mustela putorius furo 69_1.0 Domestic ferret 117 64
No Yes Ailuropoda melanoleuca 69_1 Giant panda 114 66
No Yes Canis familiaris 69_3.1 Dog 117 65
No Yes Felis catus 69 Domestic cat 74 50
No Yes Equus caballus 69_2 Horse 99 60
No Yes Myotis lucifugus 69_2.0 Little brown bat 112 67
No Yes Pteropus vampyrus 69_1 Large flying fox 102 58
No Yes Sorex araneus 69_1 European shrew 85 49
No Yes Erinaceus europaeus 69 Western European hedgehog 82 48
No Yes Procavia capensis 69_1 Cape rock hyrax 87 52
No Yes Loxodonta africana 69_3 African savanna elephant 111 66
No Yes Echinops telfairi 69 Small Madagascar hedgehog 89 57
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 79 41
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 77 45
No Yes Macropus eugenii 69_1.0 Tammar wallaby 91 52
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 104 60
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 109 61
No Yes Ornithorhynchus anatinus 69_5 Platypus 98 66
No Yes Petromyzon marinus 69_7.0 Sea lamprey 51 30
No Yes Meleagris gallopavo 69_2 Turkey 101 55
No Yes Gallus gallus 69_2 Chicken 106 60
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 104 59
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 97 55
No Yes Anolis carolinensis 69_2.0 Green anole 104 58
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 95 53
No Yes Latimeria chalumnae 69_1 Coelacanth 111 61
No Yes Gadus morhua 69_1 Atlantic cod 107 64
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 109 61
No Yes Takifugu rubripes 69_4 Torafugu 115 65
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 105 61
No Yes Oryzias latipes 69_1 Japanese medaka 95 57
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 122 67
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 126 67
No Yes Danio rerio 69_9 Zebrafish 137 72
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 30 23
No Yes Ciona intestinalis 69 Vase tunicate 38 31
No Yes Drosophila melanogaster 69_5 Fruit fly 60 34
No Yes Caenorhabditis elegans 69_215 Roundworm 24 15
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 2 2
No Yes Arabidopsis thaliana 10 Thale cress 33 32
No Yes 3_Below_base_of_euphotic (meta-genome)   2 1
No Yes 6_Upper_euphotic (meta-genome)   2 2
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   1 1
No Yes Combined (meta-genome)   1 1
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes NCBI 2017_08 genome   89835 53149
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   77 77
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   4414 2810
No Yes Uniprot 2018_03 genome   49259 32384
No Yes Global Ocean Sampling Expedition (GOS)   104 63
No Yes NCBI plasmid sequences (Plasmids)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   34 25
No Yes Protein Data Bank (all PDB sequenc)   566 370
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1074 1060
No Yes TargetDB (Targets)   159 109

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