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MIR domain superfamily domain assignments
in
Ostreococcus lucimarinus CCE9901

Assignment details

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Ostreococcus lucimarinus CCE9901 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Ost9901_3|35662|e_gwEuk.7.425.1   1.44e-47   29-196   MIR domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   16934 16934
No Yes Homo sapiens 76_38 Human 46 30
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 17 11
No Yes Gorilla gorilla 76_3.1 Western gorilla 24 14
No Yes Pongo abelii 76_2 Sumatran orangutan 15 10
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 11 8
No Yes Papio anubis 76 Olive baboon 15 10
No Yes Macaca mulatta 76_1 Rhesus monkey 30 20
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 22 15
No Yes Otolemur garnettii 76_3 Small-eared galago 18 11
No Yes Microcebus murinus 76_1 Gray mouse lemur 14 10
No Yes Rattus norvegicus 76_5.0 Norway rat 21 14
No Yes Mus musculus 76_38 House mouse 29 18
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 14 9
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 11 9
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 15 9
No Yes Cavia porcellus 76_3 Domestic guinea pig 14 9
No Yes Oryctolagus cuniculus 76_2 Rabbit 12 9
No Yes Ochotona princeps 76 American pika 13 8
No Yes Tupaia belangeri 76 Northern tree shrew 11 8
No Yes Sus scrofa 76_10.2 Pig 10 9
No Yes Bos taurus 76_3.1 Cattle 20 12
No Yes Ovis aries 76_3.1 Sheep 16 10
No Yes Vicugna pacos 76_1 Alpaca 8 5
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 16 10
No Yes Mustela putorius furo 76_1.0 Domestic ferret 18 11
No Yes Ailuropoda melanoleuca 76_1 Giant panda 18 11
No Yes Canis familiaris 76_3.1 Dog 22 14
No Yes Felis catus 76_6.2 Domestic cat 17 11
No Yes Equus caballus 76_2 Horse 40 22
No Yes Myotis lucifugus 76_2.0 Little brown bat 15 10
No Yes Pteropus vampyrus 76_1 Large flying fox 15 10
No Yes Sorex araneus 76_1 European shrew 7 6
No Yes Erinaceus europaeus 76 Western European hedgehog 15 10
No Yes Procavia capensis 76_1 Cape rock hyrax 13 10
No Yes Loxodonta africana 76_3 African savanna elephant 14 10
No Yes Echinops telfairi 76 Small Madagascar hedgehog 14 9
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 15 9
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 10 7
No Yes Macropus eugenii 76_1.0 Tammar wallaby 14 9
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 17 10
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 16 10
No Yes Ornithorhynchus anatinus 76_5 Platypus 17 14
No Yes Saccoglossus kowalevskii v3.0   21 18
No Yes Petromyzon marinus 76_7.0 Sea lamprey 5 3
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 13 9
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 12 8
No Yes Meleagris gallopavo 76_2 Turkey 15 10
No Yes Gallus gallus 76_4 Chicken 11 8
No Yes Anas platyrhynchos 76_1.0 Mallard 12 9
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 15 11
No Yes Anolis carolinensis 76_2.0 Green anole 14 9
No Yes Xenopus laevis African clawed frog 12 10
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 12 8
No Yes Latimeria chalumnae 76_1 Coelacanth 16 11
No Yes Lepisosteus oculatus 76 Spotted gar 22 13
No Yes Gadus morhua 76_1 Atlantic cod 20 13
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 43 27
No Yes Takifugu rubripes 76_4 Torafugu 113 68
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 25 17
No Yes Oryzias latipes 76_1 Japanese medaka 29 18
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 22 13
No Yes Poecilia formosa 76 Amazon molly 21 13
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 24 15
No Yes Astyanax mexicanus 76 Mexican tetra 22 16
No Yes Danio rerio 76_9 Zebrafish 30 19
No Yes Oikopleura dioica   5 3
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 36 19
No Yes Ciona intestinalis 76 Vase tunicate 9 6
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 10 8
No Yes Adineta vaga   21 16
No Yes Octopus bimaculoides 280   10 7
No Yes Crassostrea gigas 22 Pacific oyster 14 9
No Yes Lottia gigantea Owl limpet 13 8
No Yes Helobdella robusta   9 6
No Yes Capitella sp. I   15 10
No Yes Danaus plexippus OGS1.0 Monarch butterfly 9 6
No Yes Heliconius melpomene Postman butterfly 5 4
No Yes Bombyx mori Domestic silkworm 4 4
No Yes Nasonia vitripennis Jewel wasp 5 4
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 18 10
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 6 5
No Yes Linepithema humile v1.1 Argentine ant 7 5
No Yes Solenopsis invicta v.2.2.3 Red fire ant 5 4
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 6 5
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 7 5
No Yes Atta cephalotes v1.1   6 5
No Yes Camponotus floridanus v3.3 Florida carpenter ant 6 5
No Yes Lucilia cuprina Australian sheep blowfly 7 5
No Yes Drosophila grimshawi 1.3   7 5
No Yes Drosophila willistoni 1.3   7 5
No Yes Drosophila pseudoobscura 2.13   7 5
No Yes Drosophila persimilis 1.3   7 5
No Yes Drosophila suzukii   14 8
No Yes Drosophila yakuba 1.3   7 5
No Yes Drosophila simulans 1.3   7 5
No Yes Drosophila sechellia 1.3   8 6
No Yes Drosophila melanogaster 76_5 Fruit fly 27 15
No Yes Drosophila erecta 1.3   7 5
No Yes Drosophila ananassae 1.3   7 5
No Yes Drosophila virilis 1.2   7 5
No Yes Drosophila mojavensis 1.3   7 5
No Yes Megaselia scalaris 22   4 4
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 8 6
No Yes Culex pipiens quinquefasciatus Southern house mosquito 6 5
No Yes Anopheles darlingi 22 American malaria mosquito 4 3
No Yes Anopheles gambiae 49_3j African malaria mosquito 7 5
No Yes Tribolium castaneum 3.0 Red flour beetle 7 5
No Yes Pediculus humanus corporis (Early assembly) Human body louse 7 5
No Yes Rhodnius prolixus 22   6 5
No Yes Acyrthosiphon pisum Pea aphid 5 4
No Yes Daphnia pulex Common water flea 10 8
No Yes Strigamia maritima 22   7 5
No Yes Sarcoptes scabiei   6 5
No Yes Tetranychus urticae Two-spotted spider mite 6 4
No Yes Ixodes scapularis (Preliminary) Black-legged tick 5 4
No Yes Pristionchus pacificus   5 3
No Yes Meloidogyne incognita Southern root-knot nematode 2 1
No Yes Meloidogyne hapla   3 2
No Yes Onchocerca volvulus 22   4 3
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 9 5
No Yes Caenorhabditis japonica   4 3
No Yes Caenorhabditis brenneri   11 7
No Yes Caenorhabditis remanei   5 3
No Yes Caenorhabditis elegans 76_235 Roundworm 21 11
No Yes Caenorhabditis briggsae 2   7 4
No Yes Trichinella spiralis 22   8 5
No Yes Hymenolepis microstoma   3 2
No Yes Echinococcus multilocularis   3 2
No Yes Echinococcus granulosus   3 2
No Yes Taenia solium Pork tapeworm 3 3
No Yes Schistosoma mansoni   5 3
No Yes Mnemiopsis leidyi Sea walnut 5 4
No Yes Thelohanellus kitauei   1 1
No Yes Acropora digitifera v1.0   4 3
No Yes Nematostella vectensis 1.0 Starlet sea anemone 8 6
No Yes Hydra vulgaris   5 4
No Yes Amphimedon queenslandica   20 15
No Yes Trichoplax adhaerens   10 7
No Yes Proterospongia sp. ATCC 50818   13 12
No Yes Monosiga brevicollis   9 7
No Yes Sphaeroforma arctica JP610   9 9
No Yes Capsaspora owczarzaki ATCC 30864   8 7
No Yes Conidiobolus coronatus NRRL28638 v1.0   12 10
No Yes Malassezia globosa CBS 7966   6 6
No Yes Sporisorium reilianum 22   3 3
No Yes Ustilago maydis   3 3
No Yes Wallemia sebi v1.0   3 3
No Yes Mixia osmundae IAM 14324 v1.0   3 3
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   3 3
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   3 3
No Yes Melampsora laricis-populina   3 3
No Yes Rhodotorula graminis WP1 v1.0   3 3
No Yes Sporobolomyces roseus IAM 13481   3 3
No Yes Microbotryum violaceum 22   3 3
No Yes Sphaerobolus stellatus v1.0   3 3
No Yes Piloderma croceum F 1598 v1.0   4 3
No Yes Serpula lacrymans var. lacrymans S7.9   3 3
No Yes Coniophora puteana   3 3
No Yes Hydnomerulius pinastri v2.0   3 3
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   3 3
No Yes Pisolithus microcarpus 441 v1.0   3 3
No Yes Pisolithus tinctorius Marx 270 v1.0   4 4
No Yes Scleroderma citrinum Foug A v1.0   5 5
No Yes Coprinopsis cinerea okayama7 130 v3   3 3
No Yes Pleurotus ostreatus Oyster mushroom 3 3
No Yes Amanita thiersii Skay4041 v1.0   3 3
No Yes Amanita muscaria Koide v1.0 Fly agaric 3 3
No Yes Galerina marginata v1.0   3 3
No Yes Hebeloma cylindrosporum h7 v2.0   3 3
No Yes Laccaria bicolor S238N-H82   4 4
No Yes Agaricus bisporus var. bisporus   3 3
No Yes Schizophyllum commune   3 3
No Yes Stereum hirsutum FP-91666 SS1 v1.0   3 3
No Yes Heterobasidion annosum   3 3
No Yes Gloeophyllum trabeumv1.0   3 3
No Yes Punctularia strigosozonata v1.0   3 3
No Yes Phanerochaete chrysosporium RP-78 2.1   3 3
No Yes Sebacina vermifera MAFF 305830 v1.0   4 4
No Yes Fomitiporia mediterranea v1.0   3 3
No Yes Tulasnella calospora AL13/4D v1.0   3 3
No Yes Postia placenta   5 5
No Yes Wolfiporia cocos MD-104 SS10 v1.0   3 3
No Yes Fomitopsis pinicolav1.0   3 3
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   3 3
No Yes Trametes versicolor v1.0   3 3
No Yes Dichomitus squalens   3 3
No Yes Tremella mesenterica Witches' butter 3 3
No Yes Apiospora montagnei NRRL 25634 v1.0   3 3
No Yes Daldinia eschscholzii EC12 v1.0   3 3
No Yes Magnaporthe poae ATCC 64411 22   3 3
No Yes Magnaporthe grisea 70-15   3 3
No Yes Podospora anserina   3 3
No Yes Sporotrichum thermophile ATCC 42464   3 3
No Yes Thielavia terrestris NRRL 8126   3 3
No Yes Chaetomium globosum CBS 148.51   3 3
No Yes Neurospora tetrasperma   3 3
No Yes Neurospora discreta FGSC 8579   3 3
No Yes Neurospora crassa OR74A   3 3
No Yes Cryphonectria parasitica Chestnut blight fungus 3 3
No Yes Verticillium albo-atrum VaMs.102   3 3
No Yes Verticillium dahliae VdLs.17   3 3
No Yes Acremonium alcalophilumv 1.0   3 3
No Yes Glomerella graminicola 22   3 3
No Yes Fusarium graminearum   3 3
No Yes Nectria haematococca mpVI   3 3
No Yes Fusarium oxysporum f. sp. lycopersici 4286   3 3
No Yes Fusarium verticillioides 7600   3 3
No Yes Trichoderma asperellum CBS 433.97 v1.0   3 3
No Yes Trichoderma atroviride   3 3
No Yes Trichoderma citrinoviride v1.0   3 3
No Yes Trichoderma reesei 1.2   3 3
No Yes Trichoderma virens Gv29-8   3 3
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   3 3
No Yes Trichoderma harzianum CBS 226.95 v1.0   3 3
No Yes Amorphotheca resinae v1.0 Creosote fungus 3 3
No Yes Botrytis cinerea B05.10   3 3
No Yes Sclerotinia sclerotiorum   3 3
No Yes Blumeria graminis 22   3 3
No Yes Didymella exigua CBS 183.55 v1.0   3 3
No Yes Leptosphaeria maculans 22   3 3
No Yes Setosphaeria turcica v1.0   4 4
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   3 3
No Yes Cochliobolus victoriae FI3 v1.0   3 3
No Yes Cochliobolus carbonum 26-R-13 v1.0   3 3
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 3 3
No Yes Alternaria brassicicola   3 3
No Yes Cochliobolus lunatus m118 v2.0   3 3
No Yes Pyrenophora teres f. teres 22   3 3
No Yes Pyrenophora tritici-repentis   3 3
No Yes Stagonospora nodorum   3 3
No Yes Mycosphaerella graminicola IPO323   3 3
No Yes Zasmidium cellare ATCC 36951 v1.0   3 3
No Yes Septoria musiva v1.0   3 3
No Yes Mycosphaerella fijiensis CIRAD86   3 3
No Yes Dothistroma septosporum   3 3
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   3 3
No Yes Ajellomyces dermatitidis SLH14081   3 3
No Yes Histoplasma capsulatum class NAmI strain WU24   3 3
No Yes Microsporum canis CBS 113480   3 3
No Yes Arthroderma benhamiae CBS 112371   3 3
No Yes Trichophyton equinum CBS 127.97   2 2
No Yes Trichophyton verrucosum HKI 0517   3 3
No Yes Trichophyton tonsurans CBS 112818   3 3
No Yes Trichophyton rubrum CBS 118892   3 3
No Yes Paracoccidioides brasiliensis Pb18   3 3
No Yes Coccidioides posadasii RMSCC 3488   3 3
No Yes Coccidioides immitis RS   3 3
No Yes Uncinocarpus reesii 1704   3 3
No Yes Neosartorya fischeri NRRL 181   3 3
No Yes Penicillium chrysogenum Wisconsin 54-1255   3 3
No Yes Penicillium chrysogenum v1.0   3 3
No Yes Aspergillus acidus v1.0   3 3
No Yes Aspergillus fumigatus Af293   3 3
No Yes Aspergillus brasiliensis v1.0   3 3
No Yes Aspergillus nidulans FGSC A4   3 3
No Yes Aspergillus sydowii v1.0   3 3
No Yes Aspergillus versicolor v1.0   3 3
No Yes Aspergillus glaucus   3 3
No Yes Aspergillus zonatus v1.0   3 3
No Yes Aspergillus carbonarius ITEM 5010   3 3
No Yes Aspergillus terreus NIH2624   3 3
No Yes Aspergillus tubingensis v1.0   3 3
No Yes Aspergillus wentii v1.0   3 3
No Yes Aspergillus oryzae RIB40   3 3
No Yes Aspergillus niger 22   3 3
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Aspergillus flavus NRRL3357   3 3
No Yes Aspergillus clavatus NRRL 1   3 3
No Yes Penicillium marneffei ATCC 18224   3 3
No Yes Tuber melanosporum Mel28 22   3 3
No Yes Tuber melanosporum Vittad Perigord truffle 3 3
No Yes Pichia membranifaciensv1.0   5 5
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   5 5
No Yes Pichia stipitis CBS 6054   5 5
No Yes Candida guilliermondii ATCC 6260   5 5
No Yes Lodderomyces elongisporus NRRL YB-4239   5 5
No Yes Debaromyces hansenii   5 5
No Yes Hansenula polymorpha v2.0   5 5
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   5 5
No Yes Candida dubliniensis CD36   5 5
No Yes Candida tropicalis MYA-3404   5 5
No Yes Candida parapsilosis   5 5
No Yes Candida albicans SC5314   5 5
No Yes Wickerhamomyces anomalus   5 5
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   6 6
No Yes Yarrowia lipolytica CLIB122   4 4
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   5 5
No Yes Candida lusitaniae ATCC 42720   5 5
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   5 5
No Yes Pichia pastoris GS115   4 4
No Yes Vanderwaltozyma polyspora DSM 70294   7 7
No Yes Candida glabrata CBS138   7 7
No Yes Kluyveromyces thermotolerans CBS 6340   5 5
No Yes Lachancea kluyveri   5 5
No Yes Kluyveromyces waltii   5 5
No Yes Ashbya gossypii ATCC 10895   4 4
No Yes Dekkera bruxellensis CBS 2499 v2.0   5 5
No Yes Zygosaccharomyces rouxii   5 5
No Yes Saccharomyces mikatae MIT   7 7
No Yes Saccharomyces paradoxus MIT   7 7
No Yes Saccharomyces cerevisiae 76 Baker's yeast 7 7
No Yes Saccharomyces bayanus MIT   7 7
No Yes Kluyveromyces lactis   5 5
No Yes Schizosaccharomyces cryophilus OY26 22   3 3
No Yes Schizosaccharomyces octosporus yFS286   3 3
No Yes Schizosaccharomyces japonicus yFS275   3 3
No Yes Schizosaccharomyces pombe Fission yeast 3 3
No Yes Catenaria anguillulae PL171 v1.0   3 3
No Yes Allomyces macrogynus ATCC 38327   8 6
No Yes Mortierella verticillata NRRL 6337   11 11
No Yes Phycomyces blakesleeanus   12 11
No Yes Rhizopus oryzae RA 99-880   11 11
No Yes Mucor circinelloides   13 12
No Yes Rhizomucor miehei CAU432   10 9
No Yes Spizellomyces punctatus DAOM BR117   5 5
No Yes Dictyostelium discoideum   1 1
No Yes Dictyostelium purpureum   2 2
No Yes Entamoeba dispar 1.2   1 1
No Yes Entamoeba invadens 1.2   1 1
No Yes Entamoeba histolytica 1   1 1
No Yes Selaginella moellendorffii   4 4
No Yes Pinus taeda Loblolly pine 1 1
No Yes Eucalyptus grandis v201 Rose gum 1 1
No Yes Theobroma cacao B97-61/B2 v1 Cacao 1 1
No Yes Gossypium raimondii v221   5 5
No Yes Citrus clementina v165   1 1
No Yes Citrus sinensis v154 Sweet orange 2 2
No Yes Thellungiella halophila v173   1 1
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 2 2
No Yes Capsella rubella v183   1 1
No Yes Arabidopsis lyrata Lyrate rockcress 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes Carica papaya Papaya 1 1
No Yes Medicago truncatula Barrel medic 3 3
No Yes Phaseolus vulgaris v186 French bean 1 1
No Yes Glycine max v109 Soybean 4 4
No Yes Cucumis sativus v122 Cucumber 1 1
No Yes Fragaria vesca Wild strawberry 2 2
No Yes Malus domestica v196 Apple 2 2
No Yes Linum usitatissimum v200 Flax 2 2
No Yes Manihot esculenta v147 Cassava 2 2
No Yes Populus trichocarpa v156 Black cottonwood 2 2
No Yes Vitis vinifera Wine grape 2 2
No Yes Mimulus guttatus v140 Spotted monkey flower 2 2
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Solanum tuberosum Potato 2 2
No Yes Actinidia chinensis Hongyang   1 1
No Yes Aquilegia coerulea v195   1 1
No Yes Triticum aestivum 22 Bread wheat 8 8
No Yes Aegilops tauschii 22   1 1
No Yes Brachypodium distachyon Stiff brome 3 3
No Yes Oryza barthii 22 African wild rice 2 2
No Yes Oryza meridionalis 22   1 1
No Yes Oryza glumaepatula 22   2 2
No Yes Oryza glaberrima African rice 2 2
No Yes Oryza punctata 22   2 2
No Yes Oryza nivara 22   2 2
No Yes Oryza brachyantha 22 Malo sina 2 2
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 2 2
No Yes Oryza sativa v193 Rice 2 2
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 2 2
No Yes Zea mays subsp. mays Maize 4 4
No Yes Zea mays v181 Maize 4 4
No Yes Sorghum bicolor Sorghum 2 2
No Yes Setaria italica v164 Foxtail millet 2 2
No Yes Panicum virgatum v202 Switchgrass 4 4
No Yes Musa balbisiana Balbis banana 4 3
No Yes Musa acuminata 22 Wild Malaysian banana 4 4
No Yes Amborella trichopoda 22   1 1
No Yes Physcomitrella patens   3 3
No Yes Ostreococcus sp. RCC809   1 1
No Yes Ostreococcus lucimarinus CCE9901   1 1
No Yes Ostreococcus tauri   1 1
No Yes Bathycoccus prasinos   1 1
No Yes Micromonas sp. RCC299   1 1
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Asterochloris sp. Cgr/DA1pho v1.0   1 1
No Yes Chlorella variabilis sp. NC64A   1 1
No Yes Chlorella vulgaris   1 1
No Yes Volvox carteri f. nagariensis   2 2
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   3 2
No Yes Cyanidioschyzon merolae strain 10D 22   1 1
No Yes Cyanidioschyzon merolae   1 1
No Yes Porphyridium purpureum 02_2012   1 1
No Yes Thecamonas trahens ATCC 50062   3 3
No Yes Bigelowiella natans CCMP2755 22   1 1
No Yes Cyanophora paradoxa   1 1
No Yes Leishmania mexicana 2.4   2 2
No Yes Leishmania major strain Friedlin   2 1
No Yes Leishmania infantum JPCM5 2.4   2 1
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Trypanosoma cruzi strain CL Brener   1 1
No Yes Ectocarpus siliculosus   1 1
No Yes Aureococcus anophagefferens   1 1
No Yes Albugo laibachii 22   1 1
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium arrhenomanes ATCC 12531 22   1 1
No Yes Pythium ultimum v1.7-2   1 1
No Yes Pythium aphanidermatum DAOM BR444 22   1 1
No Yes Pythium vexans DAOM BR484 22   3 2
No Yes Pythium irregulare DAOM BR486 22   2 2
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Phytophthora sojae 1.1   2 2
No Yes Phytophthora infestans T30-4   1 1
No Yes Phytophthora capsici   5 5
No Yes Hyaloperonospora arabidopsidis 22   1 1
No Yes Phaeodactylum tricornutumCCAP 1055/1   1 1
No Yes Fragilariopsis cylindrus   2 2
No Yes Thalassiosira pseudonana CCMP1335   1 1
No Yes Perkinsus marinus ATCC 50983   2 2
No Yes Paramecium tetraurelia   67 47
No Yes Tetrahymena thermophila SB210 1   32 26
No Yes Ichthyophthirius multifiliis strain G5   32 22
No Yes Cryptosporidium hominis   1 1
No Yes Cryptosporidium muris   1 1
No Yes Cryptosporidium parvum Iowa II   1 1
No Yes Neospora caninum   1 1
No Yes Toxoplasma gondii VEG   1 1
No Yes Toxoplasma gondii ME49   1 1
No Yes Toxoplasma gondii GT1   2 2
No Yes Plasmodium falciparum 3D7   1 1
No Yes Plasmodium vivax SaI-1 7.0   1 1
No Yes Plasmodium knowlesi strain H   1 1
No Yes Plasmodium chabaudi   1 1
No Yes Plasmodium berghei ANKA   1 1
No Yes Symbiodinium minutum clade B1 v1.2   3 3
No Yes Naegleria gruberi   12 7
No Yes Trichomonas vaginalis   8 8
No Yes Guillardia theta CCMP2712 v1.0   13 10
No Yes Emiliania huxleyi CCMP1516   6 4
No Yes Cellulomonas fimi ATCC 484   1 1
No Yes Chlamydophila felis Fe/C-56   1 1
No Yes Chlamydophila pecorum E58   1 1
No Yes Chlamydophila pneumoniae TW-183   1 1
No Yes Chlamydia psittaci 01DC11   1 1
No Yes Chlamydia trachomatis B/Jali20/OT   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 24 17
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 15 9
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 7 5
No Yes Ascaris suum Victoria/Ghent Pig roundworm 5 3
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 17 9
No Yes Cryptococcus neoformans var. grubii H99   3 3
No Yes Cryptococcus neoformans B-3501A   3 3
No Yes Cryptococcus neoformans JEC21   3 3
No Yes Ajellomyces dermatitidis ER-3   3 3
No Yes Histoplasma capsulatum H143   3 3
No Yes Histoplasma capsulatum H88   3 3
No Yes Histoplasma capsulatum G186AR   3 3
No Yes Paracoccidioides brasiliensis Pb01   3 3
No Yes Paracoccidioides brasiliensis Pb03   3 3
No Yes Coccidioides posadasii str. Silveira   3 3
No Yes Coccidioides immitis RMSCC 3703   3 3
No Yes Coccidioides immitis RMSCC 2394   3 3
No Yes Coccidioides immitis H538.4   3 3
No Yes Aspergillus fumigatus A1163   3 3
No Yes Candida albicans WO-1   5 5
No Yes Saccharomyces cerevisiae UC5   6 6
No Yes Saccharomyces cerevisiae PW5   7 7
No Yes Saccharomyces cerevisiae FL100   1 1
No Yes Saccharomyces cerevisiae CLIB324   2 2
No Yes Saccharomyces cerevisiae CBS7960   2 2
No Yes Saccharomyces cerevisiae YJM269   4 4
No Yes Saccharomyces cerevisiae T7   7 7
No Yes Saccharomyces cerevisiae FostersB   6 6
No Yes Saccharomyces cerevisiae FostersO   7 7
No Yes Saccharomyces cerevisiae VL3   7 7
No Yes Saccharomyces cerevisiae Vin13   7 7
No Yes Saccharomyces cerevisiae LalvinQA23   7 7
No Yes Saccharomyces cerevisiae AWRI796   7 7
No Yes Saccharomyces cerevisiae Sigma1278b   7 7
No Yes Saccharomyces cerevisiae W303   7 7
No Yes Saccharomyces cerevisiae JAY291   7 7
No Yes Saccharomyces cerevisiae AWRI1631   3 3
No Yes Saccharomyces cerevisiae YPS163   1 1
No Yes Saccharomyces cerevisiae M22   1 1
No Yes Saccharomyces cerevisiae CLIB215   3 3
No Yes Saccharomyces cerevisiae Y10   1 1
No Yes Saccharomyces cerevisiae YJM789   7 7
No Yes Saccharomyces cerevisiae YJM789   7 7
No Yes Saccharomyces cerevisiae RM11-1a   7 7
No Yes Saccharomyces cerevisiae RM11-1a   6 6
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 7 7
No Yes Schizosaccharomyces pombe 972h-   3 3
No Yes Batrachochytrium dendrobatidis JEL423   4 4
No Yes Batrachochytrium dendrobatidis JAM81   4 4
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 1 1
No Yes Hordeum vulgare 22 Domesticated barley 4 4
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 2 2
No Yes Neospora caninum Nc-Liverpool 6.2   1 1
No Yes Plasmodium falciparum HB3   1 1
No Yes Chlamydia pecorum P787   1 1
No Yes Chlamydia pecorum W73   1 1
No Yes Chlamydia pecorum PV3056/3   1 1
No Yes Chlamydophila pneumoniae LPCoLN   1 1
No Yes Chlamydophila pneumoniae J138   1 1
No Yes Chlamydophila pneumoniae CWL029   1 1
No Yes Chlamydophila pneumoniae AR39   1 1
No Yes Chlamydia psittaci WC   1 1
No Yes Chlamydia psittaci VS225   1 1
No Yes Chlamydia psittaci MN   1 1
No Yes Chlamydia psittaci 84/55   1 1
No Yes Chlamydia psittaci 08DC60   1 1
No Yes Chlamydia psittaci 02DC15   1 1
No Yes Chlamydia psittaci C19/98   1 1
No Yes Chlamydia psittaci NJ1   1 1
No Yes Chlamydia psittaci CP3   1 1
No Yes Chlamydophila psittaci RD1   1 1
No Yes Chlamydia psittaci Mat116   1 1
No Yes Chlamydophila psittaci 6BC   1 1
No Yes Chlamydophila psittaci 6BC   1 1
No Yes Chlamydia trachomatis C/TW-3   1 1
No Yes Chlamydia trachomatis L2/434/Bu(f)   1 1
No Yes Chlamydia trachomatis L2/434/Bu(i)   1 1
No Yes Chlamydia trachomatis IU888   1 1
No Yes Chlamydia trachomatis IU824   1 1
No Yes Chlamydia trachomatis L2b/Canada2   1 1
No Yes Chlamydia trachomatis L2b/Canada1   1 1
No Yes Chlamydia trachomatis L3/404/LN   1 1
No Yes Chlamydia trachomatis L2b/Ams5   1 1
No Yes Chlamydia trachomatis L2b/Ams4   1 1
No Yes Chlamydia trachomatis L2b/Ams3   1 1
No Yes Chlamydia trachomatis L2b/Ams2   1 1
No Yes Chlamydia trachomatis L2b/Ams1   1 1
No Yes Chlamydia trachomatis L2b/795   1 1
No Yes Chlamydia trachomatis L2b/CV204   1 1
No Yes Chlamydia trachomatis L2b/LST   1 1
No Yes Chlamydia trachomatis L2b/UCH-2   1 1
No Yes Chlamydia trachomatis L2b/8200/07   1 1
No Yes Chlamydia trachomatis L2/25667R   1 1
No Yes Chlamydia trachomatis L1/224   1 1
No Yes Chlamydia trachomatis L1/115   1 1
No Yes Chlamydia trachomatis L1/440/LN   1 1
No Yes Chlamydia trachomatis K/SotonK1   1 1
No Yes Chlamydia trachomatis Ia/SotonIa3   1 1
No Yes Chlamydia trachomatis Ia/SotonIa1   1 1
No Yes Chlamydia trachomatis G/SotonG1   1 1
No Yes Chlamydia trachomatis F/SotonF3   1 1
No Yes Chlamydia trachomatis F/SW5   1 1
No Yes Chlamydia trachomatis F/SW4   1 1
No Yes Chlamydia trachomatis E/SotonE8   1 1
No Yes Chlamydia trachomatis E/SotonE4   1 1
No Yes Chlamydia trachomatis E/SW3   1 1
No Yes Chlamydia trachomatis D/SotonD6   1 1
No Yes Chlamydia trachomatis D/SotonD5   1 1
No Yes Chlamydia trachomatis D/SotonD1   1 1
No Yes Chlamydia trachomatis A/5291   1 1
No Yes Chlamydia trachomatis A/363   1 1
No Yes Chlamydia trachomatis RC-J/971   1 1
No Yes Chlamydia trachomatis RC-L2/55   1 1
No Yes Chlamydia trachomatis J/6276tet1   1 1
No Yes Chlamydia trachomatis RC-J/966   1 1
No Yes Chlamydia trachomatis RC-J(s)/122   1 1
No Yes Chlamydia trachomatis RC-F(s)/342   1 1
No Yes Chlamydia trachomatis RC-L2(s)/3   1 1
No Yes Chlamydia trachomatis RC-J/953   1 1
No Yes Chlamydia trachomatis RC-J943   1 1
No Yes Chlamydia trachomatis RC-Fs852   1 1
No Yes Chlamydia trachomatis RC-L2s46   1 1
No Yes Chlamydia trachomatis RC-F69   1 1
No Yes Chlamydia trachomatis L2c   1 1
No Yes Chlamydia trachomatis D-LC   1 1
No Yes Chlamydia trachomatis D-EC   1 1
No Yes Chlamydia trachomatis G/9301   1 1
No Yes Chlamydia trachomatis G/11074   1 1
No Yes Chlamydia trachomatis G/11222   1 1
No Yes Chlamydia trachomatis G/9768   1 1
No Yes Chlamydia trachomatis E/150   1 1
No Yes Chlamydia trachomatis E/11023   1 1
No Yes Chlamydia trachomatis B/TZ1A828/OT   1 1
No Yes Chlamydia trachomatis Sweden2   1 1
No Yes Chlamydia trachomatis E/Bour   1 1
No Yes Chlamydia trachomatis A2497   1 1
No Yes Chlamydia trachomatis A2497   1 1
No Yes Chlamydia trachomatis L2b/UCH-1/proctitis   1 1
No Yes Chlamydia trachomatis 434/Bu   1 1
No Yes Chlamydia trachomatis A/HAR-13   1 1
No Yes Chlamydia trachomatis D/UW-3/CX   1 1
No Yes Homo sapiens (NCBI version) Human 26 17
No Yes Homo sapiens 75_37 (old version GRC) Human 51 34
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 17 11
No Yes Heliconius numata (Incomplete)   3 3
No Yes Loa loa v3.3 (Request) Eye worm 6 4
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 4 3
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 5 3
No Yes Moniliophthora perniciosa FA553 (Genome survey)   4 4
No Yes Encephalitozoon intestinalis (endoparasite)   2 2
No Yes Encephalitozoon cuniculi (endoparasite)   2 2
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Lotus japonicus (Early assembly)   1 1
No Yes Malus x domestica (Duplicate) Apple 2 2
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   2 2
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Phoenix dactylifera (Early draft) Date palm 3 3
No Yes Homo sapiens 69_37 Human 18 11
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 16 10
No Yes Gorilla gorilla 69_3.1 Western gorilla 18 11
No Yes Pongo abelii 69_2 Sumatran orangutan 15 10
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 9 7
No Yes Macaca mulatta 69_1 Rhesus monkey 12 8
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 9 7
No Yes Otolemur garnettii 69_3 Small-eared galago 16 10
No Yes Microcebus murinus 69_1 Gray mouse lemur 14 10
No Yes Rattus norvegicus 69_3.4 Norway rat 18 12
No Yes Mus musculus 69_38 House mouse 19 12
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 14 9
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 11 9
No Yes Cavia porcellus 69_3 Domestic guinea pig 14 9
No Yes Oryctolagus cuniculus 69_2 Rabbit 12 8
No Yes Ochotona princeps 69 American pika 13 8
No Yes Tupaia belangeri 69 Northern tree shrew 11 8
No Yes Sus scrofa 69_10.2 Pig 10 9
No Yes Bos taurus 69_3.1 Cattle 16 10
No Yes Vicugna pacos 69_1 Alpaca 8 5
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 16 10
No Yes Mustela putorius furo 69_1.0 Domestic ferret 16 10
No Yes Ailuropoda melanoleuca 69_1 Giant panda 16 10
No Yes Canis familiaris 69_3.1 Dog 16 10
No Yes Felis catus 69 Domestic cat 15 10
No Yes Equus caballus 69_2 Horse 18 11
No Yes Myotis lucifugus 69_2.0 Little brown bat 15 10
No Yes Pteropus vampyrus 69_1 Large flying fox 15 10
No Yes Sorex araneus 69_1 European shrew 7 6
No Yes Erinaceus europaeus 69 Western European hedgehog 15 10
No Yes Procavia capensis 69_1 Cape rock hyrax 13 10
No Yes Loxodonta africana 69_3 African savanna elephant 10 7
No Yes Echinops telfairi 69 Small Madagascar hedgehog 14 9
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 7 5
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 10 7
No Yes Macropus eugenii 69_1.0 Tammar wallaby 14 9
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 15 9
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 16 10
No Yes Ornithorhynchus anatinus 69_5 Platypus 12 10
No Yes Petromyzon marinus 69_7.0 Sea lamprey 5 3
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 13 9
No Yes Meleagris gallopavo 69_2 Turkey 12 8
No Yes Gallus gallus 69_2 Chicken 13 9
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 12 9
No Yes Anolis carolinensis 69_2.0 Green anole 14 10
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 12 8
No Yes Latimeria chalumnae 69_1 Coelacanth 14 10
No Yes Gadus morhua 69_1 Atlantic cod 20 13
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 23 14
No Yes Takifugu rubripes 69_4 Torafugu 21 13
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 23 15
No Yes Oryzias latipes 69_1 Japanese medaka 21 12
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 22 13
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 23 14
No Yes Danio rerio 69_9 Zebrafish 18 11
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 6 4
No Yes Ciona intestinalis 69 Vase tunicate 7 5
No Yes Drosophila melanogaster 69_5 Fruit fly 7 5
No Yes Caenorhabditis elegans 69_215 Roundworm 5 3
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 7 7
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   2 2
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   44 41
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   793 605
No Yes Uniprot 2017_06 genome   8598 6795
No Yes Global Ocean Sampling Expedition (GOS)   16 13
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   377 203
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   404 404
No Yes TargetDB (Targets)   12 12

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