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Genome Names, Identifiers and Phylogenetic Trees

Create custom lists of genome identifiers or phylogenetic trees.

These lists of genomes can be used to plot phylogenetic trees on this page, or to compare genomes on other pages. Click on the sTOL logo on the right to browse GO terms distributed over the tree.

Select a list of genome identifiers

Build a list of comma separated genome identifiers using the genome checkboxes and/or taxon links.

Selected genomes: iSI

The values in the 'Code' column are the 2-letter genome identifiers used by the SUPERFAMILY database. Some of the identifiers have a relation to the species name, but many do not.

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Select Code Name Genus Family Order Class Phylum Kingdom Superkingdom
hsHomo sapiens 76_38
xpPan troglodytes 76_2.1.4
gxGorilla gorilla 76_3.1
ofPongo abelii 76_2
NlNomascus leucogenys 76_1.0
hFlPapio anubis 76
ruMacaca mulatta 76_1
CJCallithrix jacchus 76_3.2.1
obOtolemur garnettii 76_3
ioMicrocebus murinus 76_1
rnRattus norvegicus 76_5.0
mmMus musculus 76_38
inDipodomys ordii 76_1
gbIctidomys tridecemlineatus 76_2
HgHeterocephalus glaber v1.7-2
guCavia porcellus 76_3
okOryctolagus cuniculus 76_2
oqOchotona princeps 76
tzTupaia belangeri 76
SSSus scrofa 76_10.2
bvBos taurus 76_3.1
tfIOvis aries 76_3.1
vuVicugna pacos 76_1
utTursiops truncatus 76_1
MpfMustela putorius furo 76_1.0
PAAiluropoda melanoleuca 76_1
dgCanis familiaris 76_3.1
feFelis catus 76_6.2
eqEquus caballus 76_2
luMyotis lucifugus 76_2.0
vrPteropus vampyrus 76_1
xrSorex araneus 76_1
ekErinaceus europaeus 76
vnProcavia capensis 76_1
lkLoxodonta africana 76_3
eeEchinops telfairi 76
d5Dasypus novemcinctus 76_2
GGCholoepus hoffmanni 76_1
mrMacropus eugenii 76_1.0
TdSarcophilus harrisii 76_7.0
opMonodelphis domestica 76_5
ohOrnithorhynchus anatinus 76_5
SKSaccoglossus kowalevskii v3.0
PmPetromyzon marinus 76_7.0
MLMeleagris gallopavo 76_2
ggGallus gallus 76_4
7N1Anas platyrhynchos 76_1.0
zfTaeniopygia guttata 76_3.2.4
Pr5Ficedula albicollis 76_1.0
PsiPelodiscus sinensis 76_1.0
nkAnolis carolinensis 76_2.0
xlXenopus laevis
xnXenopus tropicalis 76_4.2
LcLatimeria chalumnae 76_1
74pLepisosteus oculatus 76
CoGadus morhua 76_1
tnTetraodon nigroviridis 76_8
toTakifugu rubripes 76_4
gcGasterosteus aculeatus 76_1
olOryzias latipes 76_1
XmXiphophorus maculatus 76_4.4.2
vR2Poecilia formosa 76
OnOreochromis niloticus 76_1.0
94RAstyanax mexicanus 76
daDanio rerio 76_9
w1Oikopleura dioica
c0Ciona savignyi 76_2.0
isCiona intestinalis 76
tuStrongylocentrotus purpuratus v3.1
AvAdineta vaga
bfOctopus bimaculoides 280
UcXCrassostrea gigas 22
gyLottia gigantea
hxHelobdella robusta
i1Capitella sp. I
DpDanaus plexippus OGS1.0
HmHeliconius melpomene
omBombyx mori
nzNasonia vitripennis
aiApis mellifera 38.2d
zgHarpegnathos saltator v3.3
zlLinepithema humile v1.1
zjPogonomyrmex barbatus v1.2
znSolenopsis invicta v.2.2.3
AeAcromyrmex echinatior v3.8
zbAtta cephalotes v1.1
zdCamponotus floridanus v3.3
LCuLucilia cuprina
gdDrosophila grimshawi 1.3
gwDrosophila willistoni 1.3
doDrosophila pseudoobscura 2.13
dqDrosophila persimilis 1.3
DsDrosophila suzukii
dyDrosophila yakuba 1.3
dwDrosophila simulans 1.3
dzDrosophila sechellia 1.3
ddDrosophila melanogaster 76_5
geDrosophila erecta 1.3
dkDrosophila ananassae 1.3
duDrosophila virilis 1.2
dxDrosophila mojavensis 1.3
triTriops cancriformis
DGNMegaselia scalaris 22
axAedes aegypti 55
ieCulex pipiens quinquefasciatus
nzUAnopheles darlingi 22
agAnopheles gambiae 49_3j
tjTribolium castaneum 3.0
hvPediculus humanus corporis
qpAcyrthosiphon pisum
yk1Rhodnius prolixus 22
d7Daphnia pulex
m08Strigamia maritima 22
SScSarcoptes scabiei
TuTetranychus urticae
iiIxodes scapularis
wpPristionchus pacificus
MIMeloidogyne incognita
MhMeloidogyne hapla
SiOOnchocerca volvulus 22
r0Brugia malayi WS250
wjCaenorhabditis japonica
wnCaenorhabditis brenneri
wrCaenorhabditis remanei
clCaenorhabditis elegans 76_235
cwCaenorhabditis briggsae 2
4v4Trichinella spiralis 22
HymHymenolepis microstoma
maaEchinococcus multilocularis
EcgEchinococcus granulosus
TsTaenia solium
hzSchistosoma mansoni
MLeMnemiopsis leidyi
TKiThelohanellus kitauei
APAcropora digitifera v1.0
nwNematostella vectensis 1.0
qmHydra vulgaris
z4Amphimedon queenslandica
rqTrichoplax adhaerens
PRProterospongia sp. ATCC 50818
ovMonosiga brevicollis
SASphaeroforma arctica JP610
wzCapsaspora owczarzaki ATCC 30864
x6lConidiobolus coronatus NRRL28638 v1.0
MvMortierella verticillata NRRL 6337
hnPhycomyces blakesleeanus
ryRhizopus oryzae RA 99-880
ulMucor circinelloides
rzmRhizomucor miehei CAU432
gzMalassezia globosa CBS 7966
IA4Sporisorium reilianum 22
umUstilago maydis
mWgMixia osmundae IAM 14324 v1.0
OwfCronartium quercuum f. sp. fusiforme G11 v1.0
p4Puccinia graminis f. sp. tritici CRL 75-36-700-3
qlMelampsora laricis-populina
qbRhodotorula graminis WP1 v1.0
yuSporobolomyces roseus IAM 13481
X4qMicrobotryum violaceum 22
qnWallemia sebi v1.0
iUFSphaerobolus stellatus v1.0
NX7Piloderma croceum F 1598 v1.0
SLSerpula lacrymans var. lacrymans S7.9
q1Coniophora puteana
dUPHydnomerulius pinastri v2.0
fu6Paxillus rubicundulus Ve08.2h10 v1.0
rAMPisolithus microcarpus 441 v1.0
i0vPisolithus tinctorius Marx 270 v1.0
KRsScleroderma citrinum Foug A v1.0
orCoprinopsis cinerea okayama7 130 v3
POPleurotus ostreatus
aIMAmanita thiersii Skay4041 v1.0
bU9Amanita muscaria Koide v1.0
GfCGalerina marginata v1.0
VL4Hebeloma cylindrosporum h7 v2.0
loLaccaria bicolor S238N-H82
ABAgaricus bisporus var. bisporus
zcSchizophyllum commune
qiStereum hirsutum FP-91666 SS1 v1.0
qaHeterobasidion annosum
q6Gloeophyllum trabeumv1.0
q9Punctularia strigosozonata v1.0
rXiSebacina vermifera MAFF 305830 v1.0
q4Fomitiporia mediterranea v1.0
1baTulasnella calospora AL13/4D v1.0
iaPostia placenta
qoWolfiporia cocos MD-104 SS10 v1.0
q5Fomitopsis pinicolav1.0
h5JFomitopsis pinicola FP-58527 SS1 v3.0
fcPhanerochaete chrysosporium RP-78 2.1
q2Dichomitus squalens
qjTrametes versicolor v1.0
lqTremella mesenterica
RxSDaldinia eschscholzii EC12 v1.0
MmmApiospora montagnei NRRL 25634 v1.0
7koMagnaporthe poae ATCC 64411 22
grMagnaporthe grisea 70-15
nqPodospora anserina
STSporotrichum thermophile ATCC 42464
TTThielavia terrestris NRRL 8126
hgChaetomium globosum CBS 148.51
n4Neurospora tetrasperma
n3Neurospora discreta FGSC 8579
nsNeurospora crassa OR74A
yhCryphonectria parasitica
veVerticillium albo-atrum VaMs.102
vdVerticillium dahliae VdLs.17
q0Acremonium alcalophilumv 1.0
lthGlomerella graminicola 22
fgFusarium graminearum
nxNectria haematococca mpVI
foFusarium oxysporum f. sp. lycopersici 4286
fvFusarium verticillioides 7600
R0RTrichoderma asperellum CBS 433.97 v1.0
wtTrichoderma atroviride
3JuTrichoderma citrinoviride v1.0
reTrichoderma reesei 1.2
njTrichoderma virens Gv29-8
hfvTrichoderma longibrachiatum ATCC 18648 v1.0
6mXTrichoderma harzianum CBS 226.95 v1.0
EPtAmorphotheca resinae v1.0
b7Botrytis cinerea B05.10
lzSclerotinia sclerotiorum
Fm1Blumeria graminis 22
FSZDidymella exigua CBS 183.55 v1.0
6z5Leptosphaeria maculans 22
qgSetosphaeria turcica v1.0
txDCochliobolus miyabeanus ATCC 44560 v1.0
ztxCochliobolus victoriae FI3 v1.0
4IZCochliobolus carbonum 26-R-13 v1.0
wcCochliobolus heterostrophus
l3Alternaria brassicicola
K5NCochliobolus lunatus m118 v2.0
UlWPyrenophora teres f. teres 22
t4Pyrenophora tritici-repentis
ndStagonospora nodorum
yoMycosphaerella graminicola IPO323
PCoZasmidium cellare ATCC 36951 v1.0
q3Dothistroma septosporum
qeSeptoria musiva v1.0
ymMycosphaerella fijiensis CIRAD86
LLdAureobasidium pullulans var. subglaciale EXF-2481 v1.0
ivParacoccidioides brasiliensis Pb18
i6Coccidioides posadasii RMSCC 3488
imCoccidioides immitis RS
j2Ajellomyces dermatitidis SLH14081
hkHistoplasma capsulatum class NAmI strain WU24
qcMicrosporum canis CBS 113480
o7Trichophyton equinum CBS 127.97
TVTrichophyton verrucosum HKI 0517
ARArthroderma benhamiae CBS 112371
TPTrichophyton tonsurans CBS 112818
TRTrichophyton rubrum CBS 118892
urUncinocarpus reesii 1704
RcyAspergillus zonatus v1.0
PCPenicillium chrysogenum Wisconsin 54-1255
qxCPenicillium chrysogenum v1.0
vXEAspergillus acidus v1.0
aoAspergillus fumigatus Af293
qYvAspergillus brasiliensis v1.0
anAspergillus nidulans FGSC A4
HlWAspergillus sydowii v1.0
GrQAspergillus versicolor v1.0
KZpAspergillus glaucus
ACAspergillus carbonarius ITEM 5010
nhNeosartorya fischeri NRRL 181
giAspergillus terreus NIH2624
oVwAspergillus tubingensis v1.0
CUlAspergillus wentii v1.0
a8Aspergillus oryzae RIB40
zmDAspergillus niger 22
a5Aspergillus niger ATCC 1015
gqAspergillus flavus NRRL3357
a7Aspergillus clavatus NRRL 1
PMPenicillium marneffei ATCC 18224
doxTuber melanosporum Mel28 22
TMTuber melanosporum Vittad
q7Hansenula polymorpha v2.0
urBDekkera bruxellensis CBS 2499 v2.0
q8Pichia membranifaciensv1.0
wfRCandida tanzawaensis NRRL Y-17324 v1.0
CDCandida dubliniensis CD36
t3Candida tropicalis MYA-3404
ikCandida parapsilosis
alCandida albicans SC5314
lyLodderomyces elongisporus NRRL YB-4239
0RmBabjeviella inositovora NRRL Y-12698 v1.0
ipPichia stipitis CBS 6054
ngCandida guilliermondii ATCC 6260
Sj2Hyphopichia burtonii NRRL Y-1933 v1.0
dhDebaromyces hansenii
zkWickerhamomyces anomalus
PPPichia pastoris GS115
WIBHanseniaspora valbyensis NRRL Y-1626 v1.1
ylYarrowia lipolytica CLIB122
iuCandida lusitaniae ATCC 42720
90jMetschnikowia bicuspidata NRRL YB-4993 v1.0
vwVanderwaltozyma polyspora DSM 70294
glCandida glabrata CBS138
yvKluyveromyces thermotolerans CBS 6340
y4Lachancea kluyveri
kwKluyveromyces waltii
goAshbya gossypii ATCC 10895
yzZygosaccharomyces rouxii
y6Saccharomyces mikatae MIT
y8Saccharomyces paradoxus MIT
xsSaccharomyces cerevisiae 76
y1Saccharomyces bayanus MIT
klKluyveromyces lactis
A8oSchizosaccharomyces cryophilus OY26 22
o9Schizosaccharomyces octosporus yFS286
hjSchizosaccharomyces japonicus yFS275
poSchizosaccharomyces pombe
C24Catenaria anguillulae PL171 v1.0
AMAllomyces macrogynus ATCC 38327
ziSpizellomyces punctatus DAOM BR117
dtDictyostelium discoideum
ydDictyostelium purpureum
EDEntamoeba dispar 1.2
EIEntamoeba invadens 1.2
enEntamoeba histolytica 1
gjSelaginella moellendorffii
PpiPinus taeda
PpaPicea abies
EgEucalyptus grandis v201
TcTheobroma cacao B97-61/B2 v1
p5lGossypium raimondii v221
CcCitrus clementina v165
CsCitrus sinensis v154
kleThellungiella halophila v173
BraBrassica rapa Chiifu-401 1.2
p06Capsella rubella v183
l4Arabidopsis lyrata
atArabidopsis thaliana 10
r6Carica papaya
mwMedicago truncatula
9UDPhaseolus vulgaris v186
ygGlycine max v109
CUCucumis sativus v122
w3Fragaria vesca
cwbMalus domestica v196
PEPrunus persica v139
ZraLinum usitatissimum v200
MEManihot esculenta v147
ptPopulus trichocarpa v156
vtVitis vinifera
MGMimulus guttatus v140
z7Solanum lycopersicum v.2.3
pTSolanum tuberosum
AChActinidia chinensis Hongyang
AcAquilegia coerulea v195
wUrTriticum urartu 22
UJcTriticum aestivum 22
Ov1Aegilops tauschii 22
BDBrachypodium distachyon
NGDOryza barthii 22
QxXOryza meridionalis 22
117Oryza glumaepatula 22
OgOryza glaberrima
jS2Oryza punctata 22
X03Oryza nivara 22
FzjOryza brachyantha 22
osOryza sativa ssp. japonica 5.0
AnKOryza sativa v193
PhePhyllostachys heterocyclavar. pubescens
LPnPanicum virgatum v202
SiSetaria italica v164
zeZea mays subsp. mays
e0IZea mays v181
ojSorghum bicolor
MbaMusa balbisiana
t09Musa acuminata 22
r9uAmborella trichopoda 22
pwPhyscomitrella patens
CXCoccomyxa subellipsoidea sp. C-169 v2
AchAsterochloris sp. Cgr/DA1pho v1.0
h2Chlorella variabilis sp. NC64A
vgChlorella vulgaris
voVolvox carteri f. nagariensis
BHKVolvox carteri v199
cyChlamydomonas reinhardtii 4.0
o8Ostreococcus sp. RCC809
ozOstreococcus lucimarinus CCE9901
ouOstreococcus tauri
BaBathycoccus prasinos
ijMicromonas sp. RCC299
iqMicromonas pusilla CCMP1545 v3.0
H7uCyanidioschyzon merolae strain 10D 22
yaCyanidioschyzon merolae
PopPorphyridium purpureum 02_2012
TtThecamonas trahens ATCC 50062
iSIBigelowiella natans CCMP2755 22
gfGiardia lamblia 2.3
CypCyanophora paradoxa
LMLeishmania mexicana 2.4
emLeishmania major strain Friedlin
lhLeishmania infantum JPCM5 2.4
ibLeishmania braziliensis MHOM/BR/75/M2904 2.4
TITrypanosoma vivax
uzTrypanosoma cruzi strain CL Brener
o6Trypanosoma congolense 2.4
tbTrypanosoma brucei gambiense v4.1
TbTrypanosoma brucei TREU927 v4.1
EsEctocarpus siliculosus
a6Aureococcus anophagefferens
hqzAlbugo laibachii 22
zUUPythium iwayamai DAOM BR242034 22
DhkPythium arrhenomanes ATCC 12531 22
PuPythium ultimum v1.7-2
tfVPythium aphanidermatum DAOM BR444 22
cM3Pythium irregulare DAOM BR486 22
5oNPythium vexans DAOM BR484 22
raPhytophthora ramorum 1.1
sjPhytophthora sojae 1.1
iyPhytophthora infestans T30-4
yyPhytophthora capsici
V7GHyaloperonospora arabidopsidis 22
wfPhaeodactylum tricornutumCCAP 1055/1
waFragilariopsis cylindrus
wgThalassiosira pseudonana CCMP1335
PmaPerkinsus marinus ATCC 50983
irParamecium tetraurelia
hyTetrahymena thermophila SB210 1
ImIchthyophthirius multifiliis strain G5
rmCryptosporidium hominis
ucCryptosporidium muris
cvCryptosporidium parvum Iowa II
unNeospora caninum
uvToxoplasma gondii VEG
ueToxoplasma gondii ME49
ugToxoplasma gondii GT1
o0Babesia bovis T2Bo
pvTheileria parva
nuTheileria annulata
plPlasmodium falciparum 3D7
vxPlasmodium vivax SaI-1 7.0
fwPlasmodium knowlesi strain H
pyPlasmodium yoelii ssp. yoelii 1
fyPlasmodium chabaudi
fbPlasmodium berghei ANKA
SmnSymbiodinium minutum clade B1 v1.2
ebNaegleria gruberi
txTrichomonas vaginalis
GtGuillardia theta CCMP2712 v1.0
weEmiliania huxleyi CCMP1516
8EThermobaculum terrenum ATCC BAA-798
TLnLeptolyngbya sp. PCC 7376
Cy2Pseudanabaena sp. PCC 7367
81Acaryochloris marina MBIC11017
csSynechocystis sp. PCC 6803
toqThermosynechococcus sp. NK55
thThermosynechococcus elongatus BP-1
fN9Synechococcus sp. PCC 7502
qVlSynechococcus sp. PCC 6312
0hSynechococcus sp. CC9311
snSynechococcus elongatus PCC 7942
0yProchlorococcus marinus str. MIT 9515
JuKMicrocoleus sp. PCC 7113
4iTrichodesmium erythraeum IMS101
HFgGeitlerinema sp. PCC 7407
0DCyanothece sp. PCC 8802
5BTGloeocapsa sp. PCC 7428
aKcyanobacterium UCYN-A
8V2Halothece sp. PCC 7418
84Microcystis aeruginosa NIES-843
gvGloeobacter violaceus PCC 7421
ADwRivularia sp. PCC 7116
rbNCalothrix sp. PCC 7507
vaAnabaena variabilis ATCC 29413
dM'Nostoc azollae' 0708
yzNNostoc sp. PCC 7107
9jNostoc punctiforme PCC 73102
noNostoc sp. PCC 7120
Cw6Nostoc sp. PCC 7524
UByAnabaena sp. 90
9yCandidatus Phytoplasma mali
ayAster yellows witches'-broom phytoplasma AYWB
oyOnion yellows phytoplasma OY-M
mfMesoplasma florum L1
8aUreaplasma parvum serovar 3 str. ATCC 27815
uuUreaplasma urealyticum serovar 10 str. ATCC 33699
b5GMycoplasma leachii 99/014/6
hJMycoplasma mycoides subsp. capri LC str. 95010
yiMycoplasma capricolum subsp. capricolum ATCC 27343
aO3Mycoplasma haemocanis str. Illinois
bwrMycoplasma wenyonii str. Massachusetts
dUMycoplasma suis KI3806
awMycoplasma crocodyli MP145
3OMycoplasma conjunctivae HRC/581
aYrMycoplasma haemofelis Ohio2
ZlJMycoplasma bovis HB0801
meMycoplasma penetrans HF-2
bkgMycoplasma putrefaciens KS1
m0Mycoplasma mobile 163K
gLMycoplasma fermentans M64
9wMycoplasma arthritidis 158L3-1
45Mycoplasma agalactiae PG2
ycMycoplasma synoviae 53
mqMycoplasma pulmonis UAB CTIP
biyMycoplasma pneumoniae 309
b3MMycoplasma hyorhinis GDL-1
amRMycoplasma hyopneumoniae 168
6HMycoplasma hominis ATCC 23114
mgMycoplasma genitalium G37
aK2Mycoplasma gallisepticum str. F
8NConexibacter woesei DSM 14684
2UCryptobacterium curtum DSM 15641
IBJEggerthella sp. YY7918
1OEggerthella lenta DSM 2243
4CSlackia heliotrinireducens DSM 20476
cYOlsenella uli DSM 7084
0RAtopobium parvulum DSM 20469
jlCoriobacterium glomerans PW2
rwRubrobacter xylanophilus DSM 9941
D6JIlumatobacter coccineus
3DAcidimicrobium ferrooxidans DSM 10331
dDThermobispora bispora DSM 43833
2VNakamurella multipartita DSM 44233
3qAcidothermus cellulolyticus 11B
WhkModestobacter marinus
pr7Blastococcus saxobsidens DD2
7FGeodermatophilus obscurus DSM 43160
58Kineococcus radiotolerans SRS30216
4DCatenulispora acidiphila DSM 44928
9HStackebrandtia nassauensis DSM 44728
MaIFrankia symbiont of Datisca glomerata
6pFrankia sp. EAN1pec
1bFrankia alni ACN14a
tfThermobifida fusca YX
dFNocardiopsis dassonvillei subsp. dassonvillei DSM 43111
6VThermomonospora curvata DSM 43183
8UStreptosporangium roseum DSM 43021
ReIKitasatospora setae KM-6054
sfStreptomyces coelicolor A3(2)
v0VStreptomyces sp. PAMC26508
aRDStreptomyces flavogriseus ATCC 33331
rB1Streptomyces sp. SirexAA-E
7nStreptomyces griseus subsp. griseus NBRC 13350
KK0Streptomyces bingchenggensis BCW-1
uODStreptomyces violaceusniger Tu 4113
s9Streptomyces avermitilis MA-4680
RxhStreptomyces cattleya NRRL 8057 = DSM 46488
7EStreptomyces scabiei 87.22
InzStreptomyces hygroscopicus subsp. jinggangensis 5008
1ZActinosynnema mirum DSM 43827
1QSaccharomonospora viridis DSM 43017
gIPseudonocardia dioxanivorans CB1190
18Saccharopolyspora erythraea NRRL 2338
cWAmycolatopsis mediterranei U32
7AKribbella flavida DSM 17836
0jNocardioides sp. JS614
fvtPropionibacterium propionicum F0230a
8FPropionibacterium acnes SK137
WeFMicrolunatus phosphovorus NM-1
cNPropionibacterium freudenreichii subsp. shermanii CIRM-BIA1
61Salinispora arenicola CNS-205
1hSalinispora tropica CNB-440
lGVerrucosispora maris AB-18-032
iCMicromonospora sp. L5
aYMicromonospora aurantiaca ATCC 27029
JDbActinoplanes sp. N902-109
lrfActinoplanes sp. SE50/110
lqDActinoplanes missouriensis 431
dGSegniliparus rotundus DSM 44985
bMTsukamurella paurometabola DSM 20162
RdpGordonia sp. KTR9
NY6Gordonia polyisoprenivorans VH2
8GGordonia bronchialis DSM 43247
3rRhodococcus jostii RHA1
eLRhodococcus equi 103S
3ERhodococcus opacus B4
2TRhodococcus erythropolis PR4
dV7Nocardia cyriacigeorgica GUH-2
nfNocardia farcinica IFM 10152
dTAmycolicicoccus subflavus DQS3-9A1
XmdMycobacterium massiliense str. GO 06
8cMycobacterium abscessus ATCC 19977
22Mycobacterium sp. JLS
XJqMycobacterium intracellulare ATCC 13950
59Mycobacterium avium 104
28Mycobacterium vanbaalenii PYR-1
XCAMycobacterium canettii CIPT 140010059
X2BMycobacterium africanum GM041182
1RMycobacterium tuberculosis KZN 1435
7EOMycobacterium tuberculosis
07Mycobacterium bovis BCG str. Pasteur 1173P2
XyFMycobacterium rhodesiae NBB3
5oMycobacterium ulcerans Agy99
4hMycobacterium gilvum PYR-GCK
XIJMycobacterium chubuense NBB4
8uMycobacterium marinum M
3eMycobacterium smegmatis str. MC2 155
4YMycobacterium leprae Br4923
GFzCorynebacterium resistens DSM 45100
4ZCorynebacterium aurimucosum ATCC 700975
2HCorynebacterium kroppenstedtii DSM 44385
coCorynebacterium efficiens YS-314
GJnCorynebacterium ulcerans 0102
7hCorynebacterium urealyticum DSM 7109
jkCorynebacterium jeikeium K411
GdiCorynebacterium variabile DSM 44702
FP7Corynebacterium pseudotuberculosis 316
4eCorynebacterium glutamicum R
cdCorynebacterium diphtheriae NCTC 13129
t8Tropheryma whipplei TW08/27
aRSanguibacter keddieii DSM 10542
2GKytococcus sedentarius DSM 20547
5UBeutenbergia cavernae DSM 12333
lxLeifsonia xyli subsp. xyli str. CTCB07
jFMicrobacterium testaceum StLB037
32Clavibacter michiganensis subsp. michiganensis NCPPB 382
2XJonesia denitrificans DSM 20603
fDIntrasporangium calvum DSM 43043
3GBrachybacterium faecium DSM 4810
gRIsoptericola variabilis 225
7IXylanimonas cellulosilytica DSM 15894
cRCellulomonas flavigena DSM 20109
gGCellulomonas fimi ATCC 484
tsl[Cellvibrio] gilvus ATCC 13127
jhArthrobacter phenanthrenivorans Sphe3
6EArthrobacter chlorophenolicus A6
56Arthrobacter aurescens TC1
gnArthrobacter arilaitensis Re117
98Kocuria rhizophila DC2201
6QRothia mucilaginosa DY-18
idRothia dentocariosa ATCC 17931
B4bArthrobacter sp. Rue61a
1fArthrobacter sp. FB24
7fRenibacterium salmoninarum ATCC 33209
2QMicrococcus luteus NCTC 2665
7JGardnerella vaginalis 409-05
bLBifidobacterium longum subsp. longum JDM301
4EBifidobacterium animalis subsp. lactis Bl-04
7QBifidobacterium dentium Bd1
pUGBifidobacterium breve ACS-071-V-Sch8b
dQBifidobacterium bifidum S17
5gBifidobacterium adolescentis ATCC 15703
bTArcanobacterium haemolyticum DSM 20595
bNMobiluncus curtisii ATCC 43063
AcfActinomyces sp. F0330
sZNCaldilinea aerophila DSM 14535 = NBRC 104270
etDehalococcoides ethenogenes 195
10Dehalococcoides sp. BAV1
bGDehalogenimonas lykanthroporepellens BL-DC-9
gBAnaerolinea thermophila UNI-1
4MThermomicrobium roseum DSM 5159
7ZSphaerobacter thermophilus DSM 20745
5uHerpetosiphon aurantiacus DSM 785
4aRoseiflexus sp. RS-1
77Roseiflexus castenholzii DSM 13941
CfMChloroflexus sp. MS-G
2RChloroflexus sp. Y-400-fl
jbChloroflexus aggregans DSM 9485
6wChloroflexus aurantiacus J-10-fl
dcTruepera radiovictrix DSM 17093
H47Deinococcus gobiensis I-0
1BDeinococcus deserti VCD115
iLDeinococcus maricopensis DSM 21211
d4Deinococcus geothermalis DSM 11300
jCDeinococcus proteolyticus MRP
drDeinococcus radiodurans R1
fEOceanithermus profundus DSM 14977
gPMarinithermus hydrothermalis DSM 14884
dAMeiothermus silvanus DSM 9946
aLMeiothermus ruber DSM 1279
vmtThermus sp. CCB_US3_UF1
l8Thermus scotoductus SA-01
t0Thermus thermophilus HB27
1HAnaerococcus prevotii DSM 20548
8gFinegoldia magna ATCC 29328
8LVeillonella parvula DSM 2008
VntMegasphaera elsdenii DSM 20460
lNAAcidaminococcus intestini RyC-MR95
8KAcidaminococcus fermentans DSM 20731
kkKMegamonas hypermegale
dSSelenomonas sputigena ATCC 35185
4DqSelenomonas ruminantium subsp. lactilytica TAM6421
eVErysipelothrix rhusiopathiae str. Fujisawa
j0Natranaerobius thermophilus JW/NM-WN-LF
sbSymbiobacterium thermophilum IAM 14863
9ZClostridiales genomosp. BVAB3 str. UPII9-5
wq1Clostridium clariflavum DSM 19732
ymIEubacterium siraeum
0ZClostridium cellulolyticum H10
4xClostridium thermocellum ATCC 27405
jQEthanoligenens harbinense YUAN-3
lDwFaecalibacterium prausnitzii
JCGRuminococcus sp.
WK3Ruminococcus bromii
fFRuminococcus albus 7
gZThermaerobacter marianensis DSM 12885
ZDKSulfobacillus acidophilus DSM 10332
dwDOscillibacter valericigenes Sjm18-20
Vqpbutyrate-producing bacterium SS3/4
gSibutyrate-producing bacterium SM4/1
7uCandidatus Desulforudis audaxviator MP104C
bFThermincola potens JR
09Pelotomaculum thermopropionicum SI
Hj4Desulfosporosinus acidiphilus SJ4
HkcDesulfosporosinus orientis DSM 765
OuLDehalobacter sp. DCA
A1KDehalobacter sp. CF
kKSyntrophobotulus glycolicus DSM 8271
d2Desulfitobacterium hafniense Y51
H7hDesulfitobacterium dehalogenans ATCC 51507
0cDesulfotomaculum reducens MI-1
2PDesulfotomaculum acetoxidans DSM 771
4QDesulfotomaculum kuznetsovii DSM 6115
jEDesulfotomaculum carboxydivorans CO-1-SRB
eBDesulfotomaculum ruminis DSM 2154
kj6Acetobacterium woodii DSM 1030
3NEubacterium eligens ATCC 27750
iXEubacterium limosum KIST612
3xClostridium difficile 630
eOClostridium sticklandii DSM 519
LrxFilifactor alocis ATCC 35896
d3Clostridium saccharolyticum WM1
5zClostridium phytofermentans ISDg
hEClostridium lentocellum DSM 5427
eOU[Ruminococcus] obeum
XAI[Ruminococcus] torques
kzUEubacterium rectale M104/1
4PEubacterium rectale ATCC 33656
PSRCoprococcus sp. ART55/1
EPTRoseburia hominis A2-183
1vpRoseburia intestinalis
dBButyrivibrio proteoclasticus B316
mNeButyrivibrio fibrisolvens
bUSyntrophothermus lipocalidus DSM 12680
2lSyntrophomonas wolfei subsp. wolfei str. Goettingen
8jHeliobacterium modesticaldum Ice1
68Alkaliphilus oremlandii OhILAs
0nAlkaliphilus metalliredigens QYMF
sqRCandidatus Arthromitus sp. SFB-mouse-Japan
wLlClostridium sp. BNL1100
12Clostridium novyi NT
cFClostridium ljungdahlii DSM 13528
16Clostridium kluyveri DSM 555
03Clostridium beijerinckii NCIMB 8052
teClostridium tetani E88
2fClostridium perfringens ATCC 13124
aVClostridium cellulovorans 743B
0iClostridium botulinum A str. ATCC 3502
caClostridium acetobutylicum ATCC 824
ahMahella australiensis 50-1 BON
cZThermosediminibacter oceani DSM 16646
bVCaldicellulosiruptor obsidiansis OB47
fACaldicellulosiruptor kronotskyensis 2002
iHCaldicellulosiruptor hydrothermalis 108
eJCaldicellulosiruptor owensensis OL
sTuCaldicellulosiruptor lactoaceticus 6A
hNCaldicellulosiruptor kristjanssonii 177R1B
1qCaldicellulosiruptor saccharolyticus DSM 8903
5ECaldicellulosiruptor bescii DSM 6725
gUThermoanaerobacterium xylanolyticum LX-11
cLThermoanaerobacterium thermosaccharolyticum DSM 571
kcThermodesulfobium narugense DSM 14796
h3Coprothermobacter proteolyticus DSM 5265
eATepidanaerobacter acetatoxydans Re1
ttThermoanaerobacter tengcongensis MB4
c9Carboxydothermus hydrogenoformans Z-2901
m8Moorella thermoacetica ATCC 39073
a1Ammonifex degensii KC4
aXThermoanaerobacter mathranii subsp. mathranii str. A3
82Thermoanaerobacter pseudethanolicus ATCC 33223
8dThermoanaerobacter sp. X514
6OThermoanaerobacter italicus Ab9
wFtThermoanaerobacter wiegelii Rt8.B1
fJThermoanaerobacter brockii subsp. finnii Ako-1
cDAcetohalobium arabaticum DSM 5501
5DHalothermothrix orenii H 168
hMHalanaerobium hydrogeniformans
O3vHalanaerobium praevalens DSM 2228
jSCarnobacterium sp. 17-4
EnMCarnobacterium sp. WN1359
kJAerococcus urinae ACS-120-V-Col10a
FimTetragenococcus halophilus NBRC 12172
VtYMelissococcus plutonius DAT561
TQcEnterococcus sp. 7L76
IzOEnterococcus hirae ATCC 9790
IkZEnterococcus faecium Aus0004
Ib9Enterococcus faecalis 62
AcoWeissella koreensis KACC 15510
4mOenococcus oeni PSU-1
Ur6Leuconostoc sp. C2
cKLeuconostoc kimchii IMSNU 11154
7xLeuconostoc citreum KM20
2sLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293
cULeuconostoc gasicomitatum LMG 18811
1oLactobacillus casei ATCC 334
fXLactobacillus kefiranofaciens ZW3
8ZLactobacillus crispatus ST1
5RLactobacillus rhamnosus Lc 705
8CLactobacillus johnsonii FI9785
TqGLactobacillus sanfranciscensis TMW 1.1304
ToTLactobacillus salivarius CECT 5713
TnrLactobacillus ruminis ATCC 27782
9bLactobacillus fermentum IFO 3956
SdsLactobacillus amylovorus GRL1118
lsLactobacillus sakei subsp. sakei 23K
49Lactobacillus reuteri DSM 20016
13Lactobacillus gasseri ATCC 33323
4LLactobacillus plantarum JDM1
79Lactobacillus helveticus DPC 4571
50Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
gKLactobacillus buchneri NRRL B-30929
9SOLactobacillus buchneri
52Lactobacillus brevis ATCC 367
kQLactobacillus acidophilus 30SC
fEhPediococcus claussenii ATCC BAA-344
0dPediococcus pentosaceus ATCC 25745
U1NLactococcus garvieae ATCC 49156
39Lactococcus lactis subsp. cremoris MG1363
SgbStreptococcus sp. I-P16
gbwStreptococcus sp. I-G2
OZ0Streptococcus intermedius JTH08
7DStreptococcus gallolyticus UCN34
YMlStreptococcus pseudopneumoniae IS7493
lBStreptococcus pasteurianus ATCC 43144
0SStreptococcus equi subsp. equi 4047
4JStreptococcus dysgalactiae subsp. equisimilis GGS_124
gyKStreptococcus infantarius subsp. infantarius CJ18
gZlStreptococcus macedonicus ACA-DC 198
aPStreptococcus mitis B6
5HStreptococcus uberis 0140J
kFStreptococcus parauberis KCTC 11537
hB8Streptococcus parasanguinis ATCC 15912
4zStreptococcus pyogenes str. Manfredo
1UStreptococcus pneumoniae P1031
a9Streptococcus agalactiae A909
6IStreptococcus mutans NN2025
4wStreptococcus thermophilus LMD-9
0LStreptococcus suis P1/7
5bStreptococcus sanguinis SK36
3SxStreptococcus salivarius 57.I
adStreptococcus oralis Uo5
6sStreptococcus gordonii str. Challis substr. CH1
6imExiguobacterium sp. MH3
0HExiguobacterium sp. AT1b
7rExiguobacterium sibiricum 255-15
8DKyrpidia tusciae DSM 2912
4AAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
2FBrevibacillus brevis NBRC 100599
3HPaenibacillus sp. JDR-2
eYGPaenibacillus terrae HPL-003
e8iPaenibacillus mucilaginosus 3016
ePDPaenibacillus polymyxa M1
cGBacillus selenitireducens MLS10
2gListeria welshimeri serovar 6b str. SLCC5334
liListeria innocua Clip11262
6WListeria seeligeri serovar 1/2b str. SLCC3954
4UListeria monocytogenes serotype 4b str. CLIP 80459
Uu9Listeria ivanovii subsp. ivanovii PAM 55
EibSolibacillus silvestris StLB046
MiGGeobacillus thermoglucosidasius C56-YS93
7zLysinibacillus sphaericus C3-41
oiOceanobacillus iheyensis HTE831
j6Anoxybacillus flavithermus WK1
MuLGeobacillus thermoleovorans CCB_US3_UF5
gkGeobacillus kaustophilus HTA426
n8rGeobacillus sp. GHH01
1LGeobacillus sp. WCH70
1uGeobacillus thermodenitrificans NG80-2
OEoHalobacillus halophilus DSM 2266
nHIBacillus sp. JS
CA3Bacillus sp. 1NLA3E
2oBacillus amyloliquefaciens FZB42
gDBacillus atrophaeus 1942
bsBacillus subtilis subsp. subtilis str. 168
lfBacillus licheniformis DSM 13 = ATCC 14580
bhBacillus halodurans C-125
62Bacillus weihenstephanensis KBAB4
31Bacillus thuringiensis str. Al Hakam
0BBacillus cereus 03BB102
2NBacillus anthracis str. A0248
aNBacillus pseudofirmus OF4
x4Bacillus clausii KSM-K16
jZBacillus cellulosilyticus DSM 2522
6fBacillus pumilus SAFR-032
6PBacillus megaterium DSM 319
nCnBacillus coagulans 2-6
1VMacrococcus caseolyticus JCSC5402
gXStaphylococcus pseudintermedius HKU10-03
ztStaphylococcus saprophyticus subsp. saprophyticus ATCC 15305
6TStaphylococcus lugdunensis HKU09-01
zhStaphylococcus haemolyticus JCSC1435
epStaphylococcus epidermidis RP62A
5SStaphylococcus carnosus subsp. carnosus TM300
1iStaphylococcus aureus subsp. aureus JH1
brPStaphylococcus aureus
dRCandidatus Cloacamonas acidaminovorans
6BGemmatimonas aurantiaca T-27
VplMelioribacter roseus P3M
RSKIgnavibacterium album JCM 16511
9sPelodictyon phaeoclathratiforme BU-1
p7Chlorobium luteolum DSM 273
c5Chlorobium chlorochromatii CaD3
3vChlorobium phaeobacteroides DSM 266
1xChlorobium phaeovibrioides DSM 265
fpChlorobium limicola DSM 245
evChlorobaculum parvum NCIB 8327
chChlorobium tepidum TLS
9oChloroherpeton thalassium ATCC 35110
edProsthecochloris aestuarii DSM 271
eUHaliscomenobacter hydrossis DSM 1100
WOUSaprospira grandis str. Lewin
dBCNiastella koreensis GR20-10
5YChitinophaga pinensis DSM 2588
8JSalinibacter ruber M8
aDRhodothermus marinus DSM 4252
LyGFlexibacter litoralis DSM 6794
f6Candidatus Amoebophilus asiaticus 5a2
Xg7Candidatus Cardinium hertigii
o6dBelliella baltica DSM 15883
Gy3Cyclobacterium marinum DSM 745
dnMarivirga tractuosa DSM 4126
se3Fibrella aestuarina
jVLeadbetterella byssophila DSM 17132
2DDyadobacter fermentans DSM 18053
37Cytophaga hutchinsonii ATCC 33406
7PSpirosoma linguale DSM 74
0SqRunella slithyformis DSM 19594
0gParabacteroides distasonis ATCC 8503
RQbTannerella forsythia ATCC 43037
jPPaludibacter propionicigenes WB4
iOOdoribacter splanchnicus DSM 20712
h8Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2
zzVBacteroides sp. CF50
bJPrevotella melaninogenica ATCC 25845
fGjPrevotella intermedia 17
fIPrevotella denticola F0289
7YPrevotella ruminicola 23
kTPorphyromonas asaccharolytica DSM 20707
9vPorphyromonas gingivalis ATCC 33277
mELAlistipes finegoldii DSM 17242
eSBacteroides salanitronis DSM 18170
jLBacteroides helcogenes P 36-108
0rBacteroides vulgatus ATCC 8482
APvBacteroides uniformis
btBacteroides thetaiotaomicron VPI-5482
faBacteroides fragilis YCH46
iRPedobacter saltans DSM 12145
652Solitalea canadensis DSM 3403
3YPedobacter heparinus DSM 2366
kNSphingobacterium sp. 21
kUFluviicola taffensis DSM 16823
aFCandidatus Sulcia muelleri DMIN
1ICandidatus Sulcia muelleri SMDSEM
dz7Owenweeksia hongkongensis DSM 17368
9XZunongwangia profunda SM-A87
jIKrokinobacter sp. 4H-3-7-5
1sGramella forsetii KT0803
SbYLacinutrix sp. 5H-3-7-4
kSMaribacter sp. HTCC2170
6MRobiginitalea biformata HTCC2501
cQCroceibacter atlanticus HTCC2559
m02Aequorivita sublithincola DSM 14238
jIZZobellia galactanivorans
WwPMuricauda ruestringensis DSM 13258
l6Cellulophaga algicola DSM 14237
kCCellulophaga lytica DSM 7489
4VFlavobacteriaceae bacterium 3519-10
RXiPolaribacter sp. MED152
hURiemerella anatipestifer ATCC 11845 = DSM 15868
drYOrnithobacterium rhinotracheale DSM 15997
tq8Capnocytophaga canimorsus Cc5
1MCapnocytophaga ochracea DSM 7271
kXWeeksella virosa DSM 16922
LxIFlavobacterium indicum GPTSA100-9
5dFlavobacterium psychrophilum JIP02/86
Ls9Flavobacterium branchiophilum FL-15
LwWFlavobacterium columnare ATCC 49512
1zFlavobacterium johnsoniae UW101
SmKBlattabacterium sp. (Nauphoeta cinerea)
6XBlattabacterium sp. (Blattella germanica) str. Bge
LcgFibrobacter succinogenes subsp. succinogenes S85
dNWaddlia chondrophila WSU 86-1044
p0Candidatus Protochlamydia amoebophila UWE25
ebYParachlamydia acanthamoebae UV-7
iVCSimkania negevensis Z
hDChlamydophila pecorum E58
cmChlamydia muridarum Nigg
c2Chlamydophila pneumoniae TW-183
c1Chlamydophila caviae GPIC
c6Chlamydophila felis Fe/C-56
c4Chlamydophila abortus S26/3
vzjChlamydia psittaci 01DC11
0QChlamydia trachomatis B/Jali20/OT
fGgPhycisphaera mikurensis NBRC 102666
lAIsosphaera pallida ATCC 43644
gOPlanctomyces brasiliensis DSM 5305
cBPlanctomyces limnophilus DSM 3776
eFRhodopirellula baltica SH 1
aAPirellula staleyi DSM 6068
9hMethylacidiphilum infernorum V4
6LCoraliomargarita akajimensis DSM 45221
8iOpitutus terrae PB90-1