SUPERFAMILY 1.75 HMM library and genome assignments server

Cellular Component (CC): photoreceptor outer segment

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Root: GO Hierarchy Containing Three Sub-Ontologies (BP, MF, CC)

Shortest distance to current term (+ for parents, - for children) GO term [GO ID] <#Children> #High-quality
(SF|FA)
#Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   cell projection [GO:0042995] <29>(37|35) (212|219|138)
+ + + + 4:   organelle [GO:0043226] <8>(233|286) (881|845|415)
+ + + 3:   cell [GO:0005623] <4>(301|377) (988|1062|554)
+ + + 3:   cellular_component [GO:0005575] <22>
+ + + 3:   cilium [GO:0005929] <11>(6|8) (70|49|20)
+ + 2:   cell part [GO:0044464] <100>(301|377) (988|1062|554)
+ + 2:   primary cilium [GO:0072372] <2>(2|2) (30|21|7)
+ 1:   neuron part [GO:0097458] <45>(17|17) (164|153|85)
+ 1:   nonmotile primary cilium [GO:0031513] <4>(2|2) (24|17|5)
0:   photoreceptor outer segment [GO:0001750] <2>(1|1) (12|6|1)
- 1:   photoreceptor disc membrane [GO:0097381](0|0) (4|2|1)
- 1:   photoreceptor outer segment membrane [GO:0042622](1|1) (3|1|0)


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Superfamily

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
Family A G protein-coupled receptor-like00Direct


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Family

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
Rhodopsin-like00Direct


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Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Family A G protein-coupled receptor-like0Direct
Dimerization cofactor of HNF-1 alpha0.0000000001052Direct
cAMP-binding domain-like0.0000001184Direct
GAF domain-like0.000001239Direct
Transducin (alpha subunit), insertion domain0.000005495Direct
E set domains0.000006784Direct
HD-domain/PDEase-like0.000006784Direct
Doublecortin (DC)0.000008324Direct
Tetraspanin0.000009522Direct
Heme-dependent peroxidases0.0004549Direct
Regulator of G-protein signaling, RGS0.0009944Direct
Transducin (heterotrimeric G protein), gamma chain0.00132Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55781,55781
  • 55781 - GAF domain-like
  • 55781 - GAF domain-like
  • 0.0000008324Direct
    55781,109604
  • 55781 - GAF domain-like
  • 109604 - HD-domain/PDEase-like
  • 0.0000008324Direct
    48097,56112
  • 48097 - Regulator of G-protein signaling, RGS
  • 56112 - Protein kinase-like (PK-like)
  • 0.000001362Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.000005495Direct
    89837,89837
  • 89837 - Doublecortin (DC)
  • 89837 - Doublecortin (DC)
  • 0.000008324Direct
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.00007951Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    55781,55781,109604
  • 55781 - GAF domain-like
  • 55781 - GAF domain-like
  • 109604 - HD-domain/PDEase-like
  • 0.0000005486Direct


    Plot distribution on phylogenetic tree for Individual Supra-domains annotated by this GO term
    Plot tree as:   Download Newick format tree:   Browsing in Tree_gateway:
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