SUPERFAMILY 1.75 HMM library and genome assignments server

Cellular Component (CC): photoreceptor outer segment

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Root: GO Hierarchy Containing Three Sub-Ontologies (BP, MF, CC)

Shortest distance to current term (+ for parents, - for children) GO term [GO ID] <#Children> #High-quality
(SF|FA)
#Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   intracellular [GO:0005622] <1>(263|326) (932|948|466)
+ + + + + + 6:   intracellular part [GO:0044424] <146>(263|325) (932|948|465)
+ + + + + + 6:   organelle [GO:0043226] <6>(231|281) (881|838|408)
+ + + + + 5:   intracellular organelle [GO:0043229] <4>(226|273) (866|813|388)
+ + + + + 5:   membrane-bounded organelle [GO:0043227] <5>(182|217) (805|749|350)
+ + + + 4:   cell projection [GO:0042995] <26>(35|32) (206|210|134)
+ + + + 4:   intracellular membrane-bounded organelle [GO:0043231] <34>(178|212) (787|723|333)
+ + + 3:   cell [GO:0005623] <2>(298|371) (993|1059|555)
+ + + 3:   cellular_component [GO:0005575] <20>
+ + + 3:   cilium [GO:0005929] <3>(4|6) (61|44|20)
+ + 2:   cell part [GO:0044464] <98>(298|371) (993|1059|555)
+ + 2:   primary cilium [GO:0072372] <2>(2|2) (30|22|8)
+ 1:   neuron part [GO:0097458] <42>(15|15) (157|144|80)
+ 1:   nonmotile primary cilium [GO:0031513] <4>(2|2) (24|17|5)
0:   photoreceptor outer segment [GO:0001750] <2>(1|1) (11|5|1)
- 1:   photoreceptor disc membrane [GO:0097381](0|0) (4|2|1)
- 1:   photoreceptor outer segment membrane [GO:0042622](1|1) (3|1|0)


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Superfamily

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
Family A G protein-coupled receptor-like00Direct


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Family

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
Rhodopsin-like00Direct


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Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Family A G protein-coupled receptor-like0Direct
Dimerization cofactor of HNF-1 alpha8.287e-11Direct
Doublecortin (DC)2.002e-07Direct
Transducin (alpha subunit), insertion domain4.908e-06Direct
E set domains5.938e-06Direct
cAMP-binding domain-like0.0001444Direct
Heme-dependent peroxidases0.0004323Direct
Transducin (heterotrimeric G protein), gamma chain0.0008856Direct
GAF domain-like0.007061Inherited
HD-domain/PDEase-like0.01635Inherited
Regulator of G-protein signaling, RGS0.05731Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
89837,89837
  • 89837 - Doublecortin (DC)
  • 89837 - Doublecortin (DC)
  • 2.002e-07Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 4.908e-06Direct
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 7.563e-05Direct
    55781,109604
  • 55781 - GAF domain-like
  • 109604 - HD-domain/PDEase-like
  • 0.005799Inherited
    55781,55781
  • 55781 - GAF domain-like
  • 55781 - GAF domain-like
  • 0.005799Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    55781,55781,109604
  • 55781 - GAF domain-like
  • 55781 - GAF domain-like
  • 109604 - HD-domain/PDEase-like
  • 0.004679Inherited


    Plot distribution on phylogenetic tree for Individual Supra-domains annotated by this GO term
    Plot tree as:   Download Newick format tree:   Browsing in Tree_gateway:
    (show help)