SUPERFAMILY 1.75 HMM library and genome assignments server

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Cellular Component (CC): photoreceptor outer segment

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Root: GO Hierarchy Containing Three Sub-Ontologies (BP, MF, CC)

Shortest distance to current term (+ for parents, - for children) GO term [GO ID] <#Children> #High-quality
(SF|FA)
#Supra-domain
(Single|Duplex|Triple)
+ + + 3:   cell [GO:0005623] <5>(262|329) (995|1058|561)
+ + + 3:   cell projection [GO:0042995] <33>(26|27) (200|196|113)
+ + + 3:   cellular_component [GO:0005575] <22>
+ + + 3:   non-motile cilium [GO:0097730] <2>(3|3) (20|13|2)
+ + + 3:   organelle [GO:0043226] <10>(201|246) (864|835|405)
+ + 2:   9+2 non-motile cilium [GO:0097732] <2>(3|3) (18|12|2)
+ + 2:   cell part [GO:0044464] <110>(262|329) (995|1058|561)
+ + 2:   cell projection part [GO:0044463] <56>(18|15) (142|96|56)
+ + 2:   cilium [GO:0005929] <5>(8|8) (61|41|14)
+ + 2:   organelle part [GO:0044422] <41>(149|169) (696|568|274)
+ 1:   ciliary part [GO:0044441] <31>(6|7) (49|28|10)
+ 1:   neuron part [GO:0097458] <90>(17|16) (153|145|85)
+ 1:   photoreceptor cell cilium [GO:0097733] <2>(2|3) (17|9|2)
0:   photoreceptor outer segment [GO:0001750] <2>(2|2) (13|8|2)
- 1:   photoreceptor disc membrane [GO:0097381](0|0) (7|5|2)
- 1:   photoreceptor outer segment membrane [GO:0042622](1|1) (4|1|0)


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Superfamily

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
Family A G protein-coupled receptor-like00Direct
NAD kinase/diacylglycerol kinase-like0.00000000000002630Direct


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Family

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
Calmodulin-like0.00014580.00004171Direct
Rhodopsin-like00Direct


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Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Cryptochrome/photolyase FAD-binding domain0Direct
NAD kinase/diacylglycerol kinase-like0Direct
Family A G protein-coupled receptor-like0Direct
Cryptochrome/photolyase, N-terminal domain0Direct
Transducin (alpha subunit), insertion domain0Direct
P-loop containing nucleoside triphosphate hydrolases0.0000001595Direct
cAMP-binding domain-like0.000008022Direct
Doublecortin (DC)0.00001367Direct
Transducin (heterotrimeric G protein), gamma chain0.00005348Direct
Regulator of G-protein signaling, RGS0.0002666Direct
GAF domain-like0.0007818Direct
Cadherin-like0.001708Inherited
HD-domain/PDEase-like0.02303Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52425,48173
  • 52425 - Cryptochrome/photolyase, N-terminal domain
  • 48173 - Cryptochrome/photolyase FAD-binding domain
  • 0Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    50978,101898
  • 50978 - WD40 repeat-like
  • 101898 - NHL repeat
  • 0.000000000664Direct
    48097,56112
  • 48097 - Regulator of G-protein signaling, RGS
  • 56112 - Protein kinase-like (PK-like)
  • 0.000005985Direct
    89837,89837
  • 89837 - Doublecortin (DC)
  • 89837 - Doublecortin (DC)
  • 0.00001367Direct
    55781,55781
  • 55781 - GAF domain-like
  • 55781 - GAF domain-like
  • 0.0007818Direct
    55781,109604
  • 55781 - GAF domain-like
  • 109604 - HD-domain/PDEase-like
  • 0.0007818Direct
    49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.0008755Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    55781,55781,109604
  • 55781 - GAF domain-like
  • 55781 - GAF domain-like
  • 109604 - HD-domain/PDEase-like
  • 0.0007818Direct
    49313,49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.0008755Direct


    Plot distribution on phylogenetic tree for Individual Supra-domains annotated by this GO term
    Plot tree as:   Download Newick format tree:   Browsing in Tree_gateway:
    (show help)