SUPERFAMILY 1.75 HMM library and genome assignments server

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Cellular Component (CC): photoreceptor outer segment

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Root: GO Hierarchy Containing Three Sub-Ontologies (BP, MF, CC)

Shortest distance to current term (+ for parents, - for children) GO term [GO ID] <#Children> #High-quality
(SF|FA)
#Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   cell projection [GO:0042995] <7>(29|30) (214|222|131)
+ + + 3:   cell [GO:0005623] <1>(276|347) (1031|1098|592)
+ + + 3:   cell projection part [GO:0044463] <13>(20|16) (156|108|68)
+ + + 3:   cellular_component [GO:0005575] <22>
+ + + 3:   non-motile cilium [GO:0097730] <3>(4|3) (17|10|2)
+ + + 3:   organelle [GO:0043226] <8>(217|263) (894|862|422)
+ + + 3:   plasma membrane bounded cell projection [GO:0120025] <24>(24|24) (207|221|131)
+ + 2:   9+0 non-motile cilium [GO:0097731] <1>(4|3) (15|10|2)
+ + 2:   cell part [GO:0044464] <113>(276|347) (1031|1098|592)
+ + 2:   cilium [GO:0005929] <3>(10|9) (67|44|16)
+ + 2:   neuron projection [GO:0043005] <20>(10|11) (127|114|63)
+ + 2:   organelle part [GO:0044422] <43>(163|185) (724|597|288)
+ + 2:   plasma membrane bounded cell projection part [GO:0120038] <47>(15|14) (151|103|64)
+ 1:   ciliary part [GO:0044441] <33>(7|7) (55|28|10)
+ 1:   neuron part [GO:0097458] <87>(17|14) (158|160|96)
+ 1:   photoreceptor cell cilium [GO:0097733] <2>(3|3) (15|7|2)
0:   photoreceptor outer segment [GO:0001750] <2>(2|2) (14|7|2)
- 1:   photoreceptor disc membrane [GO:0097381](0|0) (7|5|2)
- 1:   photoreceptor outer segment membrane [GO:0042622](1|1) (4|1|0)


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Superfamily

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
Family A G protein-coupled receptor-like00Direct
NAD kinase/diacylglycerol kinase-like0.000000000000058430Direct


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Family

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
Calmodulin-like0.00006320.00003177Direct
Rhodopsin-like00Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this GO term
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Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
Family A G protein-coupled receptor-like0Direct
NAD kinase/diacylglycerol kinase-like0Direct
Cryptochrome/photolyase, N-terminal domain0Direct
Cryptochrome/photolyase FAD-binding domain0Direct
cAMP-binding domain-like0.00000008468Direct
P-loop containing nucleoside triphosphate hydrolases0.0000001868Direct
Transducin (heterotrimeric G protein), gamma chain0.00004223Direct
Doublecortin (DC)0.0000456Direct
Regulator of G-protein signaling, RGS0.0002011Direct
Tetraspanin0.0008536Direct
GAF domain-like0.0009123Direct
Cadherin-like0.003475Inherited
HD-domain/PDEase-like0.02946Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52425,48173
  • 52425 - Cryptochrome/photolyase, N-terminal domain
  • 48173 - Cryptochrome/photolyase FAD-binding domain
  • 0Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    48097,56112
  • 48097 - Regulator of G-protein signaling, RGS
  • 56112 - Protein kinase-like (PK-like)
  • 0.000004782Direct
    89837,89837
  • 89837 - Doublecortin (DC)
  • 89837 - Doublecortin (DC)
  • 0.00003234Direct
    55781,55781
  • 55781 - GAF domain-like
  • 55781 - GAF domain-like
  • 0.0009123Direct
    55781,109604
  • 55781 - GAF domain-like
  • 109604 - HD-domain/PDEase-like
  • 0.0009123Direct
    49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.002015Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    55781,55781,109604
  • 55781 - GAF domain-like
  • 55781 - GAF domain-like
  • 109604 - HD-domain/PDEase-like
  • 0.0009123Direct
    49313,49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.002015Inherited


    Plot distribution on phylogenetic tree for Individual Supra-domains annotated by this GO term
    Plot tree as:   Download Newick format tree:   Browsing in Tree_gateway:
    (show help)