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Biological Process (BP): columnar/cuboidal epithelial cell differentiation

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Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Root: GO Hierarchy Containing Three Sub-Ontologies (BP, MF, CC)

Shortest distance to current term (+ for parents, - for children) GO term [GO ID] <#Children> #High-quality
(SF|FA)
#Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   biological_process [GO:0008150] <24>
+ + + + + 5:   cellular process [GO:0009987] <21>(372|486) (1162|1371|744)
+ + + + + 5:   developmental process [GO:0032502] <12>(88|106) (562|634|415)
+ + + + + 5:   single-organism process [GO:0044699] <23>(290|375) (996|1199|711)
+ + + + 4:   anatomical structure development [GO:0048856] <208>(86|100) (540|615|406)
+ + + + 4:   single-organism cellular process [GO:0044763] <194>(233|302) (895|984|562)
+ + + + 4:   single-organism developmental process [GO:0044767] <413>(85|101) (556|628|408)
+ + + 3:   cellular developmental process [GO:0048869] <17>(54|55) (410|441|290)
+ + + 3:   tissue development [GO:0009888] <29>(31|30) (318|310|205)
+ + 2:   cell differentiation [GO:0030154] <91>(51|53) (394|430|283)
+ + 2:   epithelium development [GO:0060429] <22>(14|14) (241|223|128)
+ 1:   epithelial cell differentiation [GO:0030855] <25>(6|6) (133|112|74)
0:   columnar/cuboidal epithelial cell differentiation [GO:0002065] <5>(3|3) (65|47|26)
- 1:   glandular epithelial cell differentiation [GO:0002067] <8>(1|1) (12|5|2)
- 1:   columnar/cuboidal epithelial cell development [GO:0002066] <5>(1|1) (58|42|21)
- 1:   neuroepithelial cell differentiation [GO:0060563] <4>(2|2) (13|9|6)
- 1:   intestinal epithelial cell differentiation [GO:0060575] <3>(0|0) (1|0|0)
- 1:   ameloblast differentiation [GO:0036305](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
Cu,Zn superoxide dismutase-like00.00000000000002102Direct
Cytokine0.0000068480.115Inherited
Homeodomain-like0.033050.1098Inherited


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Family

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
Cu,Zn superoxide dismutase-like00.00000000000009112Direct
Fibroblast growth factors (FGF)0.0000043310.04232Inherited
Paired domain00.1792Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this GO term
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Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
HR1 repeat0Direct
Cu,Zn superoxide dismutase-like0.00000000000001092Direct
Stathmin0.000000000002022Direct
Kix domain of CBP (creb binding protein)0.000000004131Direct
A middle domain of Talin 10.0000001444Direct
SH3-domain0.0000006916Direct
I/LWEQ domain0.0000007024Direct
TAZ domain0.000000869Direct
N-terminal domain of cbl (N-cbl)0.000004735Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.00001538Direct
KA1-like0.00002232Direct
Zn-finger domain of Sec23/240.00004294Direct
dsRNA-binding domain-like0.0000509Direct
beta-sandwich domain of Sec23/240.00005725Direct
Ypt/Rab-GAP domain of gyp1p0.00007817Direct
BAR/IMD domain-like0.00009074Direct
L27 domain0.00009714Direct
RNA-binding domain, RBD0.0001219Direct
Protein kinase-like (PK-like)0.0004588Direct
Chromo domain-like0.00069Direct
CRAL/TRIO domain0.0007028Direct
LuxS/MPP-like metallohydrolase0.0009844Direct
FAD-linked reductases, C-terminal domain0.131Inherited
Cytokine0.09156Inherited
Immunoglobulin0.1698Inherited
Tudor/PWWP/MBT1Inherited
Cadherin-like0.5181Inherited
HLH, helix-loop-helix DNA-binding domain1Inherited
HMG-box0.2888Inherited
lambda repressor-like DNA-binding domains0.2488Inherited
F-box domain0.8295Inherited
Snake toxin-like0.04933Inherited
SH2 domain0.003046Inherited
SOCS box-like0.1603Inherited
BRK domain-like0.001964Inherited
alpha-catenin/vinculin-like0.09156Inherited
Tetraspanin0.1705Inherited
Second domain of FERM1Inherited
Ankyrin repeat1Inherited
A DNA-binding domain in eukaryotic transcription factors0.07514Inherited
(Phosphotyrosine protein) phosphatases II0.2518Inherited
SMAD MH1 domain0.004759Inherited
SMAD/FHA domain0.003046Inherited
p53-like transcription factors1Inherited
Growth factor receptor domain0.9182Inherited
EGF/Laminin1Inherited
"Winged helix" DNA-binding domain1Inherited
WD40 repeat-like0.3447Inherited
Heme-dependent peroxidases0.1432Inherited
Kazal-type serine protease inhibitors0.4113Inherited
Blood coagulation inhibitor (disintegrin)0.009709Inherited
SAP domain0.04786Inherited
Actin depolymerizing proteins0.07514Inherited
TPR-like0.1852Inherited
PYP-like sensor domain (PAS domain)0.03938Inherited
PH domain-like1Inherited
Toll/Interleukin receptor TIR domain0.009709Inherited
vWA-like0.1031Inherited
PDZ domain-like0.004873Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.1436Inherited
beta-beta-alpha zinc fingers0.8621Inherited
DHS-like NAD/FAD-binding domain0.02474Inherited
Cystine-knot cytokines0.1067Inherited
Homeodomain-like0.0872Inherited
Nuclear receptor ligand-binding domain0.8374Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48403,48452
  • 48403 - Ankyrin repeat
  • 48452 - TPR-like
  • 0Direct
    81995,55785
  • 81995 - beta-sandwich domain of Sec23/24
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0Direct
    63825,49265
  • 63825 - YWTD domain
  • 49265 - Fibronectin type III
  • 0Direct
    49265,63825
  • 49265 - Fibronectin type III
  • 63825 - YWTD domain
  • 0.00000000002074Direct
    109885,47220
  • 109885 - I/LWEQ domain
  • 47220 - alpha-catenin/vinculin-like
  • 0.0000000001145Direct
    54768,54768
  • 54768 - dsRNA-binding domain-like
  • 54768 - dsRNA-binding domain-like
  • 0.00000007937Direct
    109880,109885
  • 109880 - A middle domain of Talin 1
  • 109885 - I/LWEQ domain
  • 0.0000001444Direct
    57850,57933
  • 57850 - RING/U-box
  • 57933 - TAZ domain
  • 0.0000001887Direct
    109885,109885
  • 109885 - I/LWEQ domain
  • 109885 - I/LWEQ domain
  • 0.0000002429Direct
    81995,82919
  • 81995 - beta-sandwich domain of Sec23/24
  • 82919 - Zn-finger domain of Sec23/24
  • 0.000001041Direct
    54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0.000001244Direct
    54160,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.000003208Direct
    55550,57850
  • 55550 - SH2 domain
  • 57850 - RING/U-box
  • 0.000003694Direct
    47668,47473
  • 47668 - N-terminal domain of cbl (N-cbl)
  • 47473 - EF-hand
  • 0.000003694Direct
    47473,55550
  • 47473 - EF-hand
  • 55550 - SH2 domain
  • 0.000004735Direct
    50044,51695
  • 50044 - SH3-domain
  • 51695 - PLC-like phosphodiesterases
  • 0.000007431Direct
    54160,54160
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 0.00001032Direct
    55550,55550
  • 55550 - SH2 domain
  • 55550 - SH2 domain
  • 0.00003401Direct
    69572,69572
  • 69572 - Activating enzymes of the ubiquitin-like proteins
  • 69572 - Activating enzymes of the ubiquitin-like proteins
  • 0.00003902Direct
    82919,53300
  • 82919 - Zn-finger domain of Sec23/24
  • 53300 - vWA-like
  • 0.00004294Direct
    52047,52058
  • 52047 - RNI-like
  • 52058 - L domain-like
  • 0.0002207Direct
    52058,52047
  • 52058 - L domain-like
  • 52047 - RNI-like
  • 0.0002993Direct
    52058,52058
  • 52058 - L domain-like
  • 52058 - L domain-like
  • 0.0003934Direct
    63411,63411
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 0.0005908Direct
    51905,54373
  • 51905 - FAD/NAD(P)-binding domain
  • 54373 - FAD-linked reductases, C-terminal domain
  • 0.09729Inherited
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.1464Inherited
    49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.5181Inherited
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.1018Inherited
    55550,158235
  • 55550 - SH2 domain
  • 158235 - SOCS box-like
  • 0.2712Inherited
    47923,47923
  • 47923 - Ypt/Rab-GAP domain of gyp1p
  • 47923 - Ypt/Rab-GAP domain of gyp1p
  • 0.001964Inherited
    50044,50044
  • 50044 - SH3-domain
  • 50044 - SH3-domain
  • 0.004343Inherited
    47220,47220
  • 47220 - alpha-catenin/vinculin-like
  • 47220 - alpha-catenin/vinculin-like
  • 0.09156Inherited
    52799,49562
  • 52799 - (Phosphotyrosine protein) phosphatases II
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 0.004377Inherited
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.04376Inherited
    46966,50044
  • 46966 - Spectrin repeat
  • 50044 - SH3-domain
  • 0.05987Inherited
    50044,46966
  • 50044 - SH3-domain
  • 46966 - Spectrin repeat
  • 0.1682Inherited
    57196,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.3347Inherited
    57184,57196
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 0.6849Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.9243Inherited
    57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.1345Inherited
    81383,50978
  • 81383 - F-box domain
  • 50978 - WD40 repeat-like
  • 0.002675Inherited
    55486,57552
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 57552 - Blood coagulation inhibitor (disintegrin)
  • 0.009709Inherited
    51695,49562
  • 51695 - PLC-like phosphodiesterases
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 0.01316Inherited
    47031,50729
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 1Inherited
    50156,50156
  • 50156 - PDZ domain-like
  • 50156 - PDZ domain-like
  • 0.02596Inherited
    57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.9054Inherited
    57716,48508
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 48508 - Nuclear receptor ligand-binding domain
  • 0.6516Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    63825,49265,63825
  • 63825 - YWTD domain
  • 49265 - Fibronectin type III
  • 63825 - YWTD domain
  • 0Direct
    109885,109885,47220
  • 109885 - I/LWEQ domain
  • 109885 - I/LWEQ domain
  • 47220 - alpha-catenin/vinculin-like
  • 0.0000000001145Direct
    109885,47220,47220
  • 109885 - I/LWEQ domain
  • 47220 - alpha-catenin/vinculin-like
  • 47220 - alpha-catenin/vinculin-like
  • 0.0000000001145Direct
    109885,109885,109885
  • 109885 - I/LWEQ domain
  • 109885 - I/LWEQ domain
  • 109885 - I/LWEQ domain
  • 0.0000000003766Direct
    50044,46966,46966
  • 50044 - SH3-domain
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.000000003972Direct
    52047,52058,52058
  • 52047 - RNI-like
  • 52058 - L domain-like
  • 52058 - L domain-like
  • 0.00000001478Direct
    52058,52047,52058
  • 52058 - L domain-like
  • 52047 - RNI-like
  • 52058 - L domain-like
  • 0.00000009247Direct
    109880,109885,109885
  • 109880 - A middle domain of Talin 1
  • 109885 - I/LWEQ domain
  • 109885 - I/LWEQ domain
  • 0.0000001444Direct
    81995,82919,53300
  • 81995 - beta-sandwich domain of Sec23/24
  • 82919 - Zn-finger domain of Sec23/24
  • 53300 - vWA-like
  • 0.000001041Direct
    54160,54160,52540
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.000002682Direct
    54160,52540,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.000003208Direct
    47668,47473,55550
  • 47668 - N-terminal domain of cbl (N-cbl)
  • 47473 - EF-hand
  • 55550 - SH2 domain
  • 0.000003694Direct
    47473,55550,57850
  • 47473 - EF-hand
  • 55550 - SH2 domain
  • 57850 - RING/U-box
  • 0.000003694Direct
    63411,63411,63411
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 0.000006683Direct
    50044,51695,49562
  • 50044 - SH3-domain
  • 51695 - PLC-like phosphodiesterases
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 0.000007431Direct
    57716,57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.0001756Direct
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.7108Inherited
    49313,49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.5181Inherited
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.04376Inherited
    46966,46966,50044
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 50044 - SH3-domain
  • 0.05987Inherited
    46966,50044,46966
  • 46966 - Spectrin repeat
  • 50044 - SH3-domain
  • 46966 - Spectrin repeat
  • 0.1682Inherited
    50156,50044,52540
  • 50156 - PDZ domain-like
  • 50044 - SH3-domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.2712Inherited
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.1618Inherited
    57196,57184,57196
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 0.4257Inherited
    57184,57196,57196
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.5166Inherited
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.8329Inherited


    Plot distribution on phylogenetic tree for Individual Supra-domains annotated by this GO term
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