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Biological Process (BP): germ cell development

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Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Root: GO Hierarchy Containing Three Sub-Ontologies (BP, MF, CC)

Shortest distance to current term (+ for parents, - for children) GO term [GO ID] <#Children> #High-quality
(SF|FA)
#Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   multi-organism process [GO:0051704] <17>(58|54) (383|283|130)
+ + + 3:   biological_process [GO:0008150] <24>
+ + + 3:   cellular process [GO:0009987] <21>(372|486) (1162|1371|744)
+ + + 3:   multi-organism reproductive process [GO:0044703] <15>(14|15) (214|138|64)
+ + + 3:   multicellular organismal process [GO:0032501] <6>(93|111) (573|658|432)
+ + + 3:   reproduction [GO:0000003] <6>(37|41) (304|189|85)
+ + + 3:   single-organism developmental process [GO:0044767] <413>(85|101) (556|628|408)
+ + + 3:   single-organism process [GO:0044699] <23>(290|375) (996|1199|711)
+ + 2:   anatomical structure development [GO:0048856] <208>(86|100) (540|615|406)
+ + 2:   cell differentiation [GO:0030154] <91>(51|53) (394|430|283)
+ + 2:   cellular developmental process [GO:0048869] <17>(54|55) (410|441|290)
+ + 2:   developmental process [GO:0032502] <12>(88|106) (562|634|415)
+ + 2:   multicellular organism reproduction [GO:0032504] <3>(20|21) (213|135|54)
+ + 2:   multicellular organismal reproductive process [GO:0048609] <23>(11|13) (193|127|53)
+ + 2:   reproductive process [GO:0022414] <78>(33|37) (289|181|83)
+ + 2:   sexual reproduction [GO:0019953] <6>(13|15) (198|125|52)
+ + 2:   single organism reproductive process [GO:0044702] <186>(27|29) (259|162|73)
+ + 2:   single-organism cellular process [GO:0044763] <194>(233|302) (895|984|562)
+ 1:   cell development [GO:0048468] <46>(25|24) (312|303|203)
+ 1:   cellular process involved in reproduction in multicellular organism [GO:0022412] <63>(11|9) (148|79|29)
+ 1:   developmental process involved in reproduction [GO:0003006] <171>(20|22) (213|118|56)
+ 1:   gamete generation [GO:0007276] <8>(8|9) (161|108|44)
0:   germ cell development [GO:0007281] <6>(3|3) (117|67|26)
- 1:   oogenesis [GO:0048477] <12>(2|2) (94|56|23)
- 1:   spermatid development [GO:0007286] <9>(1|1) (32|12|4)
- 1:   oocyte development [GO:0048599] <4>(2|2) (34|15|4)
- 1:   germ-line cyst formation [GO:0048134] <2>(0|0) (11|6|2)
- 1:   germ-line stem cell division [GO:0042078] <2>(0|0) (7|3|1)
- 1:   cystoblast division [GO:0007282] <1>(0|0) (2|0|0)


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Superfamily

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
Defensin-like00.0000000000000538Direct
Phospholipase D/nuclease00.0003693Direct
Cystine-knot cytokines0.052760.4811Inherited


Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
Defensin00Direct
Nuclease00.0000000000000456Direct
Gonadodropin/Follitropin0.031790.04314Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this GO term
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Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
ABC transporter transmembrane region0Direct
RNA-binding domain, RBD0Direct
dsRNA-binding domain-like9.676e-16Direct
Defensin-like0.0000000000000284Direct
HR1 repeat0.0000000000002237Direct
P-loop containing nucleoside triphosphate hydrolases0.0000000001196Direct
Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit0.0000000002189Direct
Chromo domain-like0.0000000002447Direct
The spindle assembly checkpoint protein mad20.00000001237Direct
BAR/IMD domain-like0.0000001794Direct
BRK domain-like0.0000009799Direct
Tudor/PWWP/MBT0.0000044Direct
Ypt/Rab-GAP domain of gyp1p0.00001739Direct
PAZ domain0.00005297Direct
SMAD/FHA domain0.00005811Direct
Cullin repeat-like0.00007829Direct
Stathmin0.0001507Direct
Ribonuclease H-like0.0001981Direct
Phospholipase D/nuclease0.0002583Direct
Kix domain of CBP (creb binding protein)0.0003036Direct
Subunits of heterodimeric actin filament capping protein Capz0.000304Direct
YWTD domain0.0005251Direct
G protein-binding domain0.0005977Direct
Cyclin-like0.01629Inherited
Insulin-like0.02398Inherited
SAICAR synthase-like0.3446Inherited
Cystine-knot cytokines0.4082Inherited
Tubulin nucleotide-binding domain-like0.7396Inherited
Tubulin C-terminal domain-like0.8199Inherited
EGF/Laminin1Inherited
N-terminal domain of cbl (N-cbl)0.001599Inherited
A DNA-binding domain in eukaryotic transcription factors0.02094Inherited
I/LWEQ domain0.00228Inherited
Tetraspanin0.005282Inherited
A middle domain of Talin 10.008269Inherited
L27 domain0.02516Inherited
alpha-catenin/vinculin-like0.2015Inherited
Ankyrin repeat0.4604Inherited
Second domain of FERM0.783Inherited
TAZ domain0.01524Inherited
Nucleoplasmin-like core domain0.001304Inherited
PDZ domain-like0.5732Inherited
Myosin S1 fragment, N-terminal domain0.01361Inherited
Activating enzymes of the ubiquitin-like proteins0.001382Inherited
Rap/Ran-GAP0.01524Inherited
E2F-DP heterodimerization region0.0284Inherited
Protease propeptides/inhibitors0.1553Inherited
Subtilisin-like0.3031Inherited
ARM repeat0.001711Inherited
EF-hand1Inherited
L domain-like1Inherited
DNase I-like0.2923Inherited
(Phosphotyrosine protein) phosphatases II0.1493Inherited
Glucocorticoid receptor-like (DNA-binding domain)1Inherited
beta-beta-alpha zinc fingers1Inherited
Caspase-like0.02094Inherited
CAD & PB1 domains0.329Inherited
WD40 repeat-like0.03529Inherited
SMAD MH1 domain0.02494Inherited
RING/U-box0.005858Inherited
Histone-fold0.3524Inherited
HMG-box0.9074Inherited
F-box domain1Inherited
SH3-domain0.1476Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)0.05626Inherited
SH2 domain0.0167Inherited
SOCS box-like0.02638Inherited
beta-sandwich domain of Sec23/240.09756Inherited
Heme-dependent peroxidases0.07424Inherited
Toll/Interleukin receptor TIR domain0.2607Inherited
p53-like transcription factors0.8286Inherited
PABC (PABP) domain0.03047Inherited
Homeodomain-like1Inherited
Trypsin-like serine proteases0.9403Inherited
GAS2 domain-like0.4713Inherited
N-terminal domain of adenylylcyclase associated protein, CAP0.001599Inherited
C-terminal domain of adenylylcyclase associated protein0.006162Inherited
KA1-like0.02094Inherited
Cysteine-rich domain0.6049Inherited
Ubiquitin-like0.3063Inherited
POZ domain0.01649Inherited
Kazal-type serine protease inhibitors0.05704Inherited
Spectrin repeat0.852Inherited
Snake toxin-like0.4167Inherited
Protein kinase-like (PK-like)0.002636Inherited
Calponin-homology domain, CH-domain1Inherited
PH domain-like0.8105Inherited
PYP-like sensor domain (PAS domain)0.7804Inherited
Blood coagulation inhibitor (disintegrin)0.1974Inherited
Actin depolymerizing proteins0.2943Inherited
SAP domain0.3446Inherited
TPR-like0.4563Inherited
CRAL/TRIO domain0.4713Inherited
Cadherin-like0.7688Inherited
"Winged helix" DNA-binding domain0.141Inherited
Cullin homology domain0.002263Inherited
RNase III domain-like0.04719Inherited
BRCT domain0.001272Inherited
DBL homology domain (DH-domain)1Inherited
Succinyl-CoA synthetase domains0.007277Inherited
Multidrug efflux transporter AcrB transmembrane domain0.1503Inherited
Glutathione synthetase ATP-binding domain-like0.2497Inherited
Chaperone J-domain0.502Inherited
Cysteine proteinases1Inherited
FYVE/PHD zinc finger0.2073Inherited
SpoIIaa-like0.002784Inherited
Inhibitor of apoptosis (IAP) repeat0.002498Inherited
Oxysterol-binding protein-like0.02006Inherited
Nucleoside diphosphate kinase, NDK0.02695Inherited
UBC-like0.0505Inherited
Phospholipase A2, PLA20.008269Inherited
HD-domain/PDEase-like0.1464Inherited
Kelch motif0.7355Inherited
lambda repressor-like DNA-binding domains1Inherited
Galactose-binding domain-like1Inherited
Integrin alpha N-terminal domain0.2601Inherited
Integrin domains0.329Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48403,48452
  • 48403 - Ankyrin repeat
  • 48452 - TPR-like
  • 0Direct
    81995,55785
  • 81995 - beta-sandwich domain of Sec23/24
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0Direct
    103652,50729
  • 103652 - G protein-binding domain
  • 50729 - PH domain-like
  • 0Direct
    54768,54768
  • 54768 - dsRNA-binding domain-like
  • 54768 - dsRNA-binding domain-like
  • 0Direct
    90123,52540
  • 90123 - ABC transporter transmembrane region
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    109885,47220
  • 109885 - I/LWEQ domain
  • 47220 - alpha-catenin/vinculin-like
  • 0.000000004921Direct
    54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0.000000007408Direct
    54160,54160
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 0.00000001823Direct
    56112,54236
  • 56112 - Protein kinase-like (PK-like)
  • 54236 - Ubiquitin-like
  • 0.0000008152Direct
    50729,74788
  • 50729 - PH domain-like
  • 74788 - Cullin repeat-like
  • 0.000005882Direct
    52058,56219
  • 52058 - L domain-like
  • 56219 - DNase I-like
  • 0.00001456Direct
    46689,46689
  • 46689 - Homeodomain-like
  • 46689 - Homeodomain-like
  • 0.00002375Direct
    54160,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00002424Direct
    52113,52113
  • 52113 - BRCT domain
  • 52113 - BRCT domain
  • 0.00005806Direct
    101690,53098
  • 101690 - PAZ domain
  • 53098 - Ribonuclease H-like
  • 0.0001245Direct
    74788,75632
  • 74788 - Cullin repeat-like
  • 75632 - Cullin homology domain
  • 0.0002135Direct
    75632,46785
  • 75632 - Cullin homology domain
  • 46785 - "Winged helix" DNA-binding domain
  • 0.0002135Direct
    50729,57889
  • 50729 - PH domain-like
  • 57889 - Cysteine-rich domain
  • 0.0002263Direct
    160481,52540
  • 160481 - BRK domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0003036Direct
    69572,69572
  • 69572 - Activating enzymes of the ubiquitin-like proteins
  • 69572 - Activating enzymes of the ubiquitin-like proteins
  • 0.0005977Direct
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.0006482Direct
    48371,56112
  • 48371 - ARM repeat
  • 56112 - Protein kinase-like (PK-like)
  • 0.01361Inherited
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.7396Inherited
    55550,57850
  • 55550 - SH2 domain
  • 57850 - RING/U-box
  • 0.001599Inherited
    47668,47473
  • 47668 - N-terminal domain of cbl (N-cbl)
  • 47473 - EF-hand
  • 0.001599Inherited
    47473,55550
  • 47473 - EF-hand
  • 55550 - SH2 domain
  • 0.001599Inherited
    50044,51695
  • 50044 - SH3-domain
  • 51695 - PLC-like phosphodiesterases
  • 0.001599Inherited
    109885,109885
  • 109885 - I/LWEQ domain
  • 109885 - I/LWEQ domain
  • 0.008269Inherited
    109880,109885
  • 109880 - A middle domain of Talin 1
  • 109885 - I/LWEQ domain
  • 0.008269Inherited
    47220,47220
  • 47220 - alpha-catenin/vinculin-like
  • 47220 - alpha-catenin/vinculin-like
  • 0.2015Inherited
    55550,55550
  • 55550 - SH2 domain
  • 55550 - SH2 domain
  • 0.004611Inherited
    46966,50044
  • 46966 - Spectrin repeat
  • 50044 - SH3-domain
  • 0.01352Inherited
    57850,57933
  • 57850 - RING/U-box
  • 57933 - TAZ domain
  • 0.01524Inherited
    50044,46966
  • 50044 - SH3-domain
  • 46966 - Spectrin repeat
  • 0.04246Inherited
    52058,52058
  • 52058 - L domain-like
  • 52058 - L domain-like
  • 0.6813Inherited
    47031,50729
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.7916Inherited
    69065,54768
  • 69065 - RNase III domain-like
  • 54768 - dsRNA-binding domain-like
  • 0.04719Inherited
    46785,144074
  • 46785 - "Winged helix" DNA-binding domain
  • 144074 - E2F-DP heterodimerization region
  • 0.0284Inherited
    54236,48366
  • 54236 - Ubiquitin-like
  • 48366 - Ras GEF
  • 0.05511Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 1Inherited
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.02404Inherited
    57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 1Inherited
    81383,50978
  • 81383 - F-box domain
  • 50978 - WD40 repeat-like
  • 0.04719Inherited
    47923,47923
  • 47923 - Ypt/Rab-GAP domain of gyp1p
  • 47923 - Ypt/Rab-GAP domain of gyp1p
  • 0.001351Inherited
    55550,158235
  • 55550 - SH2 domain
  • 158235 - SOCS box-like
  • 0.0284Inherited
    50044,50044
  • 50044 - SH3-domain
  • 50044 - SH3-domain
  • 0.07424Inherited
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 1Inherited
    52058,52047
  • 52058 - L domain-like
  • 52047 - RNI-like
  • 0.2541Inherited
    52047,52058
  • 52047 - RNI-like
  • 52058 - L domain-like
  • 0.3907Inherited
    47473,143575
  • 47473 - EF-hand
  • 143575 - GAS2 domain-like
  • 0.8137Inherited
    50156,50156
  • 50156 - PDZ domain-like
  • 50156 - PDZ domain-like
  • 0.7503Inherited
    46785,46785
  • 46785 - "Winged helix" DNA-binding domain
  • 46785 - "Winged helix" DNA-binding domain
  • 0.1333Inherited
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.973Inherited
    55550,56112
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.01141Inherited
    50044,55550
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.4572Inherited
    51695,49562
  • 51695 - PLC-like phosphodiesterases
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 0.04335Inherited
    55486,57552
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 57552 - Blood coagulation inhibitor (disintegrin)
  • 0.1974Inherited
    48065,50729
  • 48065 - DBL homology domain (DH-domain)
  • 50729 - PH domain-like
  • 1Inherited
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.001052Inherited
    52799,49562
  • 52799 - (Phosphotyrosine protein) phosphatases II
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 0.001098Inherited
    56059,52210
  • 56059 - Glutathione synthetase ATP-binding domain-like
  • 52210 - Succinyl-CoA synthetase domains
  • 0.001046Inherited
    56112,52799
  • 56112 - Protein kinase-like (PK-like)
  • 52799 - (Phosphotyrosine protein) phosphatases II
  • 0.001599Inherited
    47095,47095
  • 47095 - HMG-box
  • 47095 - HMG-box
  • 0.2218Inherited
    52743,49785
  • 52743 - Subtilisin-like
  • 49785 - Galactose-binding domain-like
  • 0.0284Inherited
    54897,52743
  • 54897 - Protease propeptides/inhibitors
  • 52743 - Subtilisin-like
  • 0.05963Inherited
    69318,69179
  • 69318 - Integrin alpha N-terminal domain
  • 69179 - Integrin domains
  • 0.1885Inherited
    69179,69179
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.2234Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    103652,50729,57889
  • 103652 - G protein-binding domain
  • 50729 - PH domain-like
  • 57889 - Cysteine-rich domain
  • 0Direct
    46689,46689,46689
  • 46689 - Homeodomain-like
  • 46689 - Homeodomain-like
  • 46689 - Homeodomain-like
  • 0.0000000000001722Direct
    54768,54768,54768
  • 54768 - dsRNA-binding domain-like
  • 54768 - dsRNA-binding domain-like
  • 54768 - dsRNA-binding domain-like
  • 0.0000000000009498Direct
    109885,109885,47220
  • 109885 - I/LWEQ domain
  • 109885 - I/LWEQ domain
  • 47220 - alpha-catenin/vinculin-like
  • 0.000000004921Direct
    109885,47220,47220
  • 109885 - I/LWEQ domain
  • 47220 - alpha-catenin/vinculin-like
  • 47220 - alpha-catenin/vinculin-like
  • 0.000000004921Direct
    109885,109885,109885
  • 109885 - I/LWEQ domain
  • 109885 - I/LWEQ domain
  • 109885 - I/LWEQ domain
  • 0.00000001602Direct
    50044,46966,46966
  • 50044 - SH3-domain
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.0000001636Direct
    54160,52540,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00002424Direct
    54160,54160,52540
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00002424Direct
    74788,75632,46785
  • 74788 - Cullin repeat-like
  • 75632 - Cullin homology domain
  • 46785 - "Winged helix" DNA-binding domain
  • 0.0002135Direct
    160481,52540,52540
  • 160481 - BRK domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0003036Direct
    47668,47473,55550
  • 47668 - N-terminal domain of cbl (N-cbl)
  • 47473 - EF-hand
  • 55550 - SH2 domain
  • 0.001599Inherited
    47473,55550,57850
  • 47473 - EF-hand
  • 55550 - SH2 domain
  • 57850 - RING/U-box
  • 0.001599Inherited
    50044,51695,49562
  • 50044 - SH3-domain
  • 51695 - PLC-like phosphodiesterases
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 0.001599Inherited
    109880,109885,109885
  • 109880 - A middle domain of Talin 1
  • 109885 - I/LWEQ domain
  • 109885 - I/LWEQ domain
  • 0.008269Inherited
    46966,46966,50044
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 50044 - SH3-domain
  • 0.01352Inherited
    46966,50044,46966
  • 46966 - Spectrin repeat
  • 50044 - SH3-domain
  • 46966 - Spectrin repeat
  • 0.04246Inherited
    52047,52058,52058
  • 52047 - RNI-like
  • 52058 - L domain-like
  • 52058 - L domain-like
  • 0.001599Inherited
    52058,52047,52058
  • 52058 - L domain-like
  • 52047 - RNI-like
  • 52058 - L domain-like
  • 0.01487Inherited
    57716,57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.05244Inherited
    50156,50044,52540
  • 50156 - PDZ domain-like
  • 50044 - SH3-domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.7852Inherited
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 1Inherited
    50044,55550,56112
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.1258Inherited
    56112,52799,49562
  • 56112 - Protein kinase-like (PK-like)
  • 52799 - (Phosphotyrosine protein) phosphatases II
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 0.001599Inherited
    54897,52743,49785
  • 54897 - Protease propeptides/inhibitors
  • 52743 - Subtilisin-like
  • 49785 - Galactose-binding domain-like
  • 0.01487Inherited
    69318,69179,69179
  • 69318 - Integrin alpha N-terminal domain
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.1885Inherited


    Plot distribution on phylogenetic tree for Individual Supra-domains annotated by this GO term
    Plot tree as:   Download Newick format tree:   Browsing in Tree_gateway:
    (show help)