SUPERFAMILY 1.75 HMM library and genome assignments server

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Biological Process (BP): female gamete generation

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Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Root: GO Hierarchy Containing Three Sub-Ontologies (BP, MF, CC)

Shortest distance to current term (+ for parents, - for children) GO term [GO ID] <#Children> #High-quality
(SF|FA)
#Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   biological_process [GO:0008150] <24>
+ + + + 4:   multi-organism process [GO:0051704] <17>(58|54) (383|283|130)
+ + + + 4:   multicellular organismal process [GO:0032501] <6>(93|111) (573|658|432)
+ + + 3:   multi-organism reproductive process [GO:0044703] <15>(14|15) (214|138|64)
+ + + 3:   multicellular organism reproduction [GO:0032504] <3>(20|21) (213|135|54)
+ + + 3:   reproduction [GO:0000003] <6>(37|41) (304|189|85)
+ + + 3:   reproductive process [GO:0022414] <78>(33|37) (289|181|83)
+ + + 3:   single-organism process [GO:0044699] <23>(290|375) (996|1199|711)
+ + 2:   multicellular organismal reproductive process [GO:0048609] <23>(11|13) (193|127|53)
+ + 2:   sexual reproduction [GO:0019953] <6>(13|15) (198|125|52)
+ + 2:   single organism reproductive process [GO:0044702] <186>(27|29) (259|162|73)
+ 1:   gamete generation [GO:0007276] <8>(8|9) (161|108|44)
0:   female gamete generation [GO:0007292] <6>(3|3) (108|67|28)
- 1:   oogenesis [GO:0048477] <12>(2|2) (94|56|23)
- 1:   female meiotic nuclear division [GO:0007143] <6>(0|0) (10|4|2)
- 1:   female germ-line cyst encapsulation [GO:0048139] <1>(0|0) (4|1|0)
- 1:   ovulation [GO:0030728] <1>(1|2) (11|4|3)
- 1:   vitellogenesis [GO:0007296] <1>(0|0) (2|2|0)
- 1:   embryo sac egg cell differentiation [GO:0009560](0|0) (0|0|0)


Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
Phospholipase D/nuclease00.0001007Direct
Cystine-knot cytokines0.0055960.0003171Inherited
NAD(P)-binding Rossmann-fold domains0.0014921Inherited


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Family

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
Nuclease00.00000000000001031Direct
Gonadodropin/Follitropin0.00730.02418Inherited
Tyrosine-dependent oxidoreductases0.0018121Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this GO term
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Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Spectrin repeat0Direct
HR1 repeat0.00000000000002667Direct
Stathmin0.0000000001943Direct
G protein-binding domain0.0000000002701Direct
SH3-domain0.000000002226Direct
Calponin-homology domain, CH-domain0.00000001776Direct
BAR/IMD domain-like0.0000001442Direct
Myosin S1 fragment, N-terminal domain0.0000004558Direct
DNA mismatch repair protein MutL0.0000008814Direct
SH2 domain0.000001233Direct
A middle domain of Talin 10.000002361Direct
I/LWEQ domain0.0000182Direct
DNA topoisomerase IV, alpha subunit0.00001977Direct
N-terminal domain of cbl (N-cbl)0.00004355Direct
Phospholipase D/nuclease0.00006884Direct
EGF/Laminin0.00009593Direct
N-terminal domain of adenylylcyclase associated protein, CAP0.0001001Direct
GAS2 domain-like0.0001942Direct
Cystine-knot cytokines0.0002212Direct
PH domain-like0.0003402Direct
RNA-binding domain, RBD0.0004244Direct
C-terminal domain of adenylylcyclase associated protein0.0004369Direct
KA1-like0.000489Direct
alpha-catenin/vinculin-like0.0005655Direct
YWTD domain0.000637Direct
Nucleoplasmin-like core domain0.0006822Direct
Ypt/Rab-GAP domain of gyp1p0.0007029Direct
A DNA-binding domain in eukaryotic transcription factors0.0009543Direct
EF-hand0.3019Inherited
Cadherin-like1Inherited
Rap/Ran-GAP0.001073Inherited
Activating enzymes of the ubiquitin-like proteins0.02126Inherited
E2F-DP heterodimerization region0.09832Inherited
beta-beta-alpha zinc fingers1Inherited
Protein kinase-like (PK-like)0.01291Inherited
"Winged helix" DNA-binding domain0.9764Inherited
DNase I-like0.08129Inherited
(Phosphotyrosine protein) phosphatases II0.001396Inherited
CAD & PB1 domains0.02862Inherited
Caspase-like0.05322Inherited
FYVE/PHD zinc finger0.8271Inherited
L domain-like0.08507Inherited
Hemopexin-like domain0.04778Inherited
PGBD-like0.07486Inherited
Spermadhesin, CUB domain0.1785Inherited
Riboflavin synthase domain-like0.191Inherited
Ferredoxin reductase-like, C-terminal NADP-linked domain0.2048Inherited
Nuclear receptor ligand-binding domain0.4565Inherited
Metalloproteases ("zincins"), catalytic domain0.5677Inherited
NAD(P)-binding Rossmann-fold domains1Inherited
RNase III domain-like0.09832Inherited
PAZ domain0.9538Inherited
dsRNA-binding domain-like0.1103Inherited
F-box domain1Inherited
Ribonuclease H-like0.721Inherited
ARM repeat0.8361Inherited
PDZ domain-like0.03851Inherited
Kix domain of CBP (creb binding protein)0.02872Inherited
TAZ domain0.05322Inherited
SMAD MH1 domain0.05806Inherited
SMAD/FHA domain0.2531Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)0.0046Inherited
Chromo domain-like0.656Inherited
p53-like transcription factors0.1199Inherited
SAICAR synthase-like0.08325Inherited
alpha/beta-Hydrolases1Inherited
PABC (PABP) domain0.264Inherited
Tudor/PWWP/MBT1Inherited
POZ domain0.0517Inherited
Homeodomain-like0.9019Inherited
Trypsin-like serine proteases0.9902Inherited
Ubiquitin-like0.1375Inherited
WD40 repeat-like0.1424Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.0569Inherited
Heme-dependent peroxidases0.004423Inherited
Kazal-type serine protease inhibitors0.3151Inherited
Cysteine-rich domain0.9602Inherited
Snake toxin-like0.3153Inherited
PYP-like sensor domain (PAS domain)1Inherited
Toll/Interleukin receptor TIR domain0.0254Inherited
L27 domain0.001282Inherited
Second domain of FERM0.001365Inherited
Tetraspanin0.004518Inherited
Ankyrin repeat1Inherited
SOCS box-like0.01338Inherited
beta-sandwich domain of Sec23/240.0139Inherited
BRK domain-like0.119Inherited
CRAL/TRIO domain0.01131Inherited
Actin depolymerizing proteins0.02872Inherited
TPR-like0.3291Inherited
SAP domain0.4515Inherited
Blood coagulation inhibitor (disintegrin)0.4953Inherited
Cullin homology domain0.2133Inherited
Cullin repeat-like0.6303Inherited
BRCT domain0.1199Inherited
DBL homology domain (DH-domain)0.4174Inherited
Polo-box domain0.02872Inherited
Tubulin C-terminal domain-like0.03511Inherited
Tubulin nucleotide-binding domain-like0.05121Inherited
Inhibitor of apoptosis (IAP) repeat0.02264Inherited
Cyclin-like0.09643Inherited
Insulin-like0.2133Inherited
lambda repressor-like DNA-binding domains0.528Inherited
HD-domain/PDEase-like0.06847Inherited
Kelch motif0.1703Inherited
Galactose-binding domain-like0.7682Inherited
Integrin alpha N-terminal domain0.02599Inherited
Integrin domains0.02872Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48403,48452
  • 48403 - Ankyrin repeat
  • 48452 - TPR-like
  • 0Direct
    81995,55785
  • 81995 - beta-sandwich domain of Sec23/24
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0Direct
    103652,50729
  • 103652 - G protein-binding domain
  • 50729 - PH domain-like
  • 0Direct
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.00000000000001092Direct
    46966,50044
  • 46966 - Spectrin repeat
  • 50044 - SH3-domain
  • 0.00000000134Direct
    109885,47220
  • 109885 - I/LWEQ domain
  • 47220 - alpha-catenin/vinculin-like
  • 0.000000002022Direct
    50729,57889
  • 50729 - PH domain-like
  • 57889 - Cysteine-rich domain
  • 0.00000002555Direct
    56112,82615
  • 56112 - Protein kinase-like (PK-like)
  • 82615 - Polo-box domain
  • 0.00000003088Direct
    56112,54236
  • 56112 - Protein kinase-like (PK-like)
  • 54236 - Ubiquitin-like
  • 0.000000404Direct
    50044,46966
  • 50044 - SH3-domain
  • 46966 - Spectrin repeat
  • 0.0000004558Direct
    82615,82615
  • 82615 - Polo-box domain
  • 82615 - Polo-box domain
  • 0.000001079Direct
    109880,109885
  • 109880 - A middle domain of Talin 1
  • 109885 - I/LWEQ domain
  • 0.000002361Direct
    109885,109885
  • 109885 - I/LWEQ domain
  • 109885 - I/LWEQ domain
  • 0.000003939Direct
    52058,56219
  • 52058 - L domain-like
  • 56219 - DNase I-like
  • 0.000006234Direct
    54236,48366
  • 54236 - Ubiquitin-like
  • 48366 - Ras GEF
  • 0.00001142Direct
    55550,57850
  • 55550 - SH2 domain
  • 57850 - RING/U-box
  • 0.00003409Direct
    47668,47473
  • 47668 - N-terminal domain of cbl (N-cbl)
  • 47473 - EF-hand
  • 0.00003409Direct
    47473,55550
  • 47473 - EF-hand
  • 55550 - SH2 domain
  • 0.00004355Direct
    55550,55550
  • 55550 - SH2 domain
  • 55550 - SH2 domain
  • 0.000046Direct
    50044,51695
  • 50044 - SH3-domain
  • 51695 - PLC-like phosphodiesterases
  • 0.00006767Direct
    57196,48113
  • 57196 - EGF/Laminin
  • 48113 - Heme-dependent peroxidases
  • 0.0001421Direct
    48371,56112
  • 48371 - ARM repeat
  • 56112 - Protein kinase-like (PK-like)
  • 0.0003672Direct
    47220,47220
  • 47220 - alpha-catenin/vinculin-like
  • 47220 - alpha-catenin/vinculin-like
  • 0.0003961Direct
    103657,50044
  • 103657 - BAR/IMD domain-like
  • 50044 - SH3-domain
  • 0.0004908Direct
    47473,143575
  • 47473 - EF-hand
  • 143575 - GAS2 domain-like
  • 0.0006134Direct
    55550,50044
  • 55550 - SH2 domain
  • 50044 - SH3-domain
  • 0.0006358Direct
    69572,69572
  • 69572 - Activating enzymes of the ubiquitin-like proteins
  • 69572 - Activating enzymes of the ubiquitin-like proteins
  • 0.01552Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.02271Inherited
    46785,144074
  • 46785 - "Winged helix" DNA-binding domain
  • 144074 - E2F-DP heterodimerization region
  • 0.09832Inherited
    54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0.003367Inherited
    52058,57184
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0.01552Inherited
    57184,52058
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.01552Inherited
    57184,57184
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0.02872Inherited
    47090,55486
  • 47090 - PGBD-like
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 0.03305Inherited
    69065,54768
  • 69065 - RNase III domain-like
  • 54768 - dsRNA-binding domain-like
  • 0.09832Inherited
    81383,50978
  • 81383 - F-box domain
  • 50978 - WD40 repeat-like
  • 0.01876Inherited
    54768,54768
  • 54768 - dsRNA-binding domain-like
  • 54768 - dsRNA-binding domain-like
  • 0.1712Inherited
    57850,57933
  • 57850 - RING/U-box
  • 57933 - TAZ domain
  • 0.05322Inherited
    52799,49562
  • 52799 - (Phosphotyrosine protein) phosphatases II
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 0.2507Inherited
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 1Inherited
    50156,50156
  • 50156 - PDZ domain-like
  • 50156 - PDZ domain-like
  • 0.1669Inherited
    46689,46689
  • 46689 - Homeodomain-like
  • 46689 - Homeodomain-like
  • 0.0342Inherited
    46785,46785
  • 46785 - "Winged helix" DNA-binding domain
  • 46785 - "Winged helix" DNA-binding domain
  • 0.02644Inherited
    57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.1875Inherited
    55550,56112
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.02126Inherited
    50044,55550
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.01552Inherited
    47031,50729
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.001269Inherited
    54160,54160
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 0.8307Inherited
    52058,52058
  • 52058 - L domain-like
  • 52058 - L domain-like
  • 0.3054Inherited
    52047,52058
  • 52047 - RNI-like
  • 52058 - L domain-like
  • 0.00181Inherited
    52058,52047
  • 52058 - L domain-like
  • 52047 - RNI-like
  • 0.002421Inherited
    55550,158235
  • 55550 - SH2 domain
  • 158235 - SOCS box-like
  • 0.002258Inherited
    47923,47923
  • 47923 - Ypt/Rab-GAP domain of gyp1p
  • 47923 - Ypt/Rab-GAP domain of gyp1p
  • 0.008358Inherited
    50044,50044
  • 50044 - SH3-domain
  • 50044 - SH3-domain
  • 0.05322Inherited
    51695,49562
  • 51695 - PLC-like phosphodiesterases
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 0.0226Inherited
    54160,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.2507Inherited
    55486,57552
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 57552 - Blood coagulation inhibitor (disintegrin)
  • 0.4953Inherited
    50729,50729
  • 50729 - PH domain-like
  • 50729 - PH domain-like
  • 0.02872Inherited
    74788,75632
  • 74788 - Cullin repeat-like
  • 75632 - Cullin homology domain
  • 0.2133Inherited
    75632,46785
  • 75632 - Cullin homology domain
  • 46785 - "Winged helix" DNA-binding domain
  • 0.2133Inherited
    52113,52113
  • 52113 - BRCT domain
  • 52113 - BRCT domain
  • 0.0526Inherited
    48065,50729
  • 48065 - DBL homology domain (DH-domain)
  • 50729 - PH domain-like
  • 0.4174Inherited
    50249,50249
  • 50249 - Nucleic acid-binding proteins
  • 50249 - Nucleic acid-binding proteins
  • 0.6303Inherited
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.02968Inherited
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.022Inherited
    69318,69179
  • 69318 - Integrin alpha N-terminal domain
  • 69179 - Integrin domains
  • 0.005477Inherited
    69179,69179
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.006352Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    103652,50729,57889
  • 103652 - G protein-binding domain
  • 50729 - PH domain-like
  • 57889 - Cysteine-rich domain
  • 0Direct
    52058,57184,57184
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0Direct
    46689,46689,46689
  • 46689 - Homeodomain-like
  • 46689 - Homeodomain-like
  • 46689 - Homeodomain-like
  • 0.00000000000002409Direct
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.000000000001501Direct
    46966,46966,50044
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 50044 - SH3-domain
  • 0.00000000134Direct
    109885,109885,47220
  • 109885 - I/LWEQ domain
  • 109885 - I/LWEQ domain
  • 47220 - alpha-catenin/vinculin-like
  • 0.000000002022Direct
    109885,47220,47220
  • 109885 - I/LWEQ domain
  • 47220 - alpha-catenin/vinculin-like
  • 47220 - alpha-catenin/vinculin-like
  • 0.000000002022Direct
    109885,109885,109885
  • 109885 - I/LWEQ domain
  • 109885 - I/LWEQ domain
  • 109885 - I/LWEQ domain
  • 0.000000006614Direct
    56112,82615,82615
  • 56112 - Protein kinase-like (PK-like)
  • 82615 - Polo-box domain
  • 82615 - Polo-box domain
  • 0.00000003088Direct
    50044,46966,46966
  • 50044 - SH3-domain
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.00000006821Direct
    52047,52058,52058
  • 52047 - RNI-like
  • 52058 - L domain-like
  • 52058 - L domain-like
  • 0.0000001444Direct
    46966,50044,46966
  • 46966 - Spectrin repeat
  • 50044 - SH3-domain
  • 46966 - Spectrin repeat
  • 0.0000004558Direct
    52058,52047,52058
  • 52058 - L domain-like
  • 52047 - RNI-like
  • 52058 - L domain-like
  • 0.0000008911Direct
    109880,109885,109885
  • 109880 - A middle domain of Talin 1
  • 109885 - I/LWEQ domain
  • 109885 - I/LWEQ domain
  • 0.000002361Direct
    47668,47473,55550
  • 47668 - N-terminal domain of cbl (N-cbl)
  • 47473 - EF-hand
  • 55550 - SH2 domain
  • 0.00003409Direct
    47473,55550,57850
  • 47473 - EF-hand
  • 55550 - SH2 domain
  • 57850 - RING/U-box
  • 0.00003409Direct
    50044,51695,49562
  • 50044 - SH3-domain
  • 51695 - PLC-like phosphodiesterases
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 0.00006767Direct
    57184,52058,57184
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0.000186Direct
    57716,57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.0003237Direct
    54768,54768,54768
  • 54768 - dsRNA-binding domain-like
  • 54768 - dsRNA-binding domain-like
  • 54768 - dsRNA-binding domain-like
  • 0.6303Inherited
    52058,57184,52058
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.01552Inherited
    50156,50044,52540
  • 50156 - PDZ domain-like
  • 50044 - SH3-domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.02569Inherited
    50044,55550,56112
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.05322Inherited
    54160,52540,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.2507Inherited
    54160,54160,52540
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.2507Inherited
    74788,75632,46785
  • 74788 - Cullin repeat-like
  • 75632 - Cullin homology domain
  • 46785 - "Winged helix" DNA-binding domain
  • 0.2133Inherited
    50249,50249,50249
  • 50249 - Nucleic acid-binding proteins
  • 50249 - Nucleic acid-binding proteins
  • 50249 - Nucleic acid-binding proteins
  • 0.264Inherited
    69318,69179,69179
  • 69318 - Integrin alpha N-terminal domain
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.005477Inherited


    Plot distribution on phylogenetic tree for Individual Supra-domains annotated by this GO term
    Plot tree as:   Download Newick format tree:   Browsing in Tree_gateway:
    (show help)