SUPERFAMILY 1.75 HMM library and genome assignments server

Cellular Component (CC): spectrin

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Root: GO Hierarchy Containing Three Sub-Ontologies (BP, MF, CC)

Shortest distance to current term (+ for parents, - for children) GO term [GO ID] <#Children> #High-quality
(SF|FA)
#Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   cell [GO:0005623] <4>(301|377) (988|1062|554)
+ + + + 4:   cell part [GO:0044464] <100>(301|377) (988|1062|554)
+ + + + 4:   cellular_component [GO:0005575] <22>
+ + + + 4:   intracellular [GO:0005622] <6>(263|329) (925|938|462)
+ + + + 4:   non-membrane-bounded organelle [GO:0043228] <4>(87|100) (436|343|166)
+ + + + 4:   organelle [GO:0043226] <8>(233|286) (881|845|415)
+ + + 3:   cell periphery [GO:0071944] <3>(55|63) (299|307|194)
+ + + 3:   cytoplasm [GO:0005737] <4>(195|237) (729|691|342)
+ + + 3:   intracellular non-membrane-bounded organelle [GO:0043232] <27>(86|98) (432|343|166)
+ + + 3:   intracellular organelle [GO:0043229] <5>(227|276) (854|803|386)
+ + + 3:   intracellular part [GO:0044424] <151>(263|329) (925|938|461)
+ + + 3:   organelle part [GO:0044422] <35>(156|166) (694|578|275)
+ + 2:   actin cytoskeleton [GO:0015629] <12>(12|14) (58|44|32)
+ + 2:   cell cortex [GO:0005938] <1>(8|9) (55|43|18)
+ + 2:   cortical cytoskeleton [GO:0030863] <4>(4|5) (25|21|9)
+ + 2:   cytoplasmic part [GO:0044444] <203>(191|226) (723|660|326)
+ + 2:   cytoskeleton [GO:0005856] <10>(32|33) (185|162|87)
+ + 2:   intracellular organelle part [GO:0044446] <21>(147|157) (673|547|252)
+ 1:   cell cortex part [GO:0044448] <29>(7|8) (45|28|14)
+ 1:   cortical actin cytoskeleton [GO:0030864] <6>(2|2) (18|11|5)
+ 1:   cytoskeletal part [GO:0044430] <60>(28|28) (170|150|79)
0:   spectrin [GO:0008091](0|0) (4|4|5)


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Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Spectrin repeat0Direct
PH domain-like0.00000000002706Direct
Calponin-homology domain, CH-domain0.00000000009119Direct
SH3-domain0.00000005763Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
50044,46966
  • 50044 - SH3-domain
  • 46966 - Spectrin repeat
  • 0Direct
    46966,50044
  • 46966 - Spectrin repeat
  • 50044 - SH3-domain
  • 0Direct
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0Direct
    46966,47473
  • 46966 - Spectrin repeat
  • 47473 - EF-hand
  • 0.000000009643Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    46966,50044,46966
  • 46966 - Spectrin repeat
  • 50044 - SH3-domain
  • 46966 - Spectrin repeat
  • 0Direct
    46966,46966,50044
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 50044 - SH3-domain
  • 0Direct
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0Direct
    46966,46966,47473
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 47473 - EF-hand
  • 0.000000005356Direct
    50044,46966,46966
  • 50044 - SH3-domain
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.000000006909Direct


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