SUPERFAMILY 1.75 HMM library and genome assignments server

Cellular Component (CC): spectrin

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Root: GO Hierarchy Containing Three Sub-Ontologies (BP, MF, CC)

Shortest distance to current term (+ for parents, - for children) GO term [GO ID] <#Children> #High-quality
(SF|FA)
#Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   cell [GO:0005623] <2>(297|371) (993|1063|556)
+ + + + 4:   cell part [GO:0044464] <98>(297|371) (993|1063|556)
+ + + + 4:   cellular_component [GO:0005575] <20>
+ + + + 4:   intracellular [GO:0005622] <1>(262|327) (931|951|467)
+ + + + 4:   non-membrane-bounded organelle [GO:0043228] <2>(84|98) (405|320|152)
+ + + + 4:   organelle [GO:0043226] <6>(230|282) (876|834|402)
+ + + 3:   cell periphery [GO:0071944] <3>(53|61) (300|304|196)
+ + + 3:   cytoplasm [GO:0005737] <3>(196|234) (728|683|339)
+ + + 3:   intracellular non-membrane-bounded organelle [GO:0043232] <25>(84|98) (404|320|152)
+ + + 3:   intracellular organelle [GO:0043229] <4>(225|275) (861|809|382)
+ + + 3:   intracellular part [GO:0044424] <146>(262|326) (931|951|466)
+ + + 3:   organelle part [GO:0044422] <21>(155|163) (693|574|270)
+ + 2:   actin cytoskeleton [GO:0015629] <12>(13|14) (59|44|32)
+ + 2:   cell cortex [GO:0005938] <1>(8|9) (54|42|19)
+ + 2:   cortical cytoskeleton [GO:0030863] <3>(4|5) (26|21|9)
+ + 2:   cytoplasmic part [GO:0044444] <196>(192|223) (721|650|320)
+ + 2:   cytoskeleton [GO:0005856] <9>(32|33) (189|161|86)
+ + 2:   intracellular organelle part [GO:0044446] <23>(148|155) (672|546|251)
+ 1:   cell cortex part [GO:0044448] <22>(7|8) (45|27|14)
+ 1:   cortical actin cytoskeleton [GO:0030864] <5>(2|2) (19|11|5)
+ 1:   cytoskeletal part [GO:0044430] <54>(27|27) (171|149|76)
0:   spectrin [GO:0008091](0|0) (4|4|5)


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Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Spectrin repeat0Direct
PH domain-like9.053e-12Direct
Calponin-homology domain, CH-domain2.958e-11Direct
SH3-domain5.38e-08Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
46966,50044
  • 46966 - Spectrin repeat
  • 50044 - SH3-domain
  • 0Direct
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0Direct
    50044,46966
  • 50044 - SH3-domain
  • 46966 - Spectrin repeat
  • 0Direct
    46966,47473
  • 46966 - Spectrin repeat
  • 47473 - EF-hand
  • 1.386e-08Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    46966,50044,46966
  • 46966 - Spectrin repeat
  • 50044 - SH3-domain
  • 46966 - Spectrin repeat
  • 0Direct
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0Direct
    46966,46966,50044
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 50044 - SH3-domain
  • 0Direct
    46966,46966,47473
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 47473 - EF-hand
  • 7.82e-09Direct
    50044,46966,46966
  • 50044 - SH3-domain
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 9.069e-09Direct


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