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Biological Process (BP): peptidoglycan biosynthetic process

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Root: GO Hierarchy Containing Three Sub-Ontologies (BP, MF, CC)

Shortest distance to current term (+ for parents, - for children) GO term [GO ID] <#Children> #High-quality
(SF|FA)
#Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   biological_process [GO:0008150] <24>
+ + + + + 5:   biosynthetic process [GO:0009058] <45>(161|204) (590|433|190)
+ + + + + 5:   metabolic process [GO:0008152] <15>(297|411) (979|1020|485)
+ + + + + 5:   nitrogen compound metabolic process [GO:0006807] <15>(204|254) (734|582|253)
+ + + + + 5:   organic substance metabolic process [GO:0071704] <43>(275|383) (946|982|459)
+ + + + 4:   carbohydrate derivative metabolic process [GO:1901135] <39>(67|77) (270|141|52)
+ + + + 4:   cellular biosynthetic process [GO:0044249] <43>(154|189) (574|417|187)
+ + + + 4:   cellular component organization or biogenesis [GO:0071840] <2>(110|109) (650|619|353)
+ + + + 4:   cellular metabolic process [GO:0044237] <40>(274|373) (920|926|412)
+ + + + 4:   cellular process [GO:0009987] <17>(361|468) (1158|1346|734)
+ + + + 4:   macromolecule metabolic process [GO:0043170] <18>(158|208) (676|685|313)
+ + + + 4:   organic substance biosynthetic process [GO:1901576] <36>(152|194) (568|419|185)
+ + + + 4:   organonitrogen compound metabolic process [GO:1901564] <70>(153|184) (501|330|136)
+ + + 3:   aminoglycan metabolic process [GO:0006022] <5>(6|8) (49|24|7)
+ + + 3:   carbohydrate derivative biosynthetic process [GO:1901137] <28>(33|43) (165|82|37)
+ + + 3:   cell wall organization or biogenesis [GO:0071554] <6>(8|7) (72|32|9)
+ + + 3:   cellular component biogenesis [GO:0044085] <13>(61|56) (377|276|159)
+ + + 3:   cellular macromolecule biosynthetic process [GO:0034645] <15>(61|74) (323|212|94)
+ + + 3:   cellular macromolecule metabolic process [GO:0044260] <14>(142|186) (623|607|261)
+ + + 3:   macromolecule biosynthetic process [GO:0009059] <21>(62|77) (334|224|102)
+ + + 3:   organonitrogen compound biosynthetic process [GO:1901566] <60>(106|126) (342|221|94)
+ + 2:   aminoglycan biosynthetic process [GO:0006023] <3>(3|4) (32|18|7)
+ + 2:   cell wall biogenesis [GO:0042546] <7>(5|4) (42|22|7)
+ + 2:   cell wall macromolecule metabolic process [GO:0044036] <7>(5|5) (37|17|5)
+ + 2:   cellular component macromolecule biosynthetic process [GO:0070589] <2>(4|2) (26|12|4)
+ + 2:   glycosaminoglycan metabolic process [GO:0030203] <6>(6|7) (37|22|6)
+ 1:   cell wall macromolecule biosynthetic process [GO:0044038] <6>(2|2) (25|12|4)
+ 1:   glycosaminoglycan biosynthetic process [GO:0006024] <8>(3|4) (25|17|6)
+ 1:   peptidoglycan metabolic process [GO:0000270] <3>(3|3) (21|14|3)
+ 1:   peptidoglycan-based cell wall biogenesis [GO:0009273] <5>(3|4) (27|18|6)
0:   peptidoglycan biosynthetic process [GO:0009252] <1>(1|1) (17|11|3)
- 1:   peptidoglycan-protein cross-linking [GO:0018104] <3>(0|0) (1|0|0)


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Superfamily

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
beta-lactamase/transpeptidase-like0.000080660Direct


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Family

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
beta-Lactamase/D-ala carboxypeptidase0.00013820Direct


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Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Penicillin binding protein dimerisation domain0Direct
MurD-like peptide ligases, peptide-binding domain0Direct
MurE/MurF N-terminal domain0Direct
beta-lactamase/transpeptidase-like0Direct
MurCD N-terminal domain0Direct
MurD-like peptide ligases, catalytic domain0Direct
Penicillin-binding protein 2x (pbp-2x), c-terminal domain0.000000000001158Direct
Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain0.00000000001565Direct
Aspartate/glutamate racemase0.0000000004452Direct
EPT/RTPC-like0.00000008356Direct
Alanine racemase C-terminal domain-like0.0000005469Direct
PreATP-grasp domain0.000001591Direct
Penicillin-binding protein associated domain0.00000312Direct
PLP-binding barrel0.000004204Direct
Glutathione synthetase ATP-binding domain-like0.00004332Direct
Lysozyme-like0.0001395Direct
L,D-transpeptidase catalytic domain-like0.01128Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
53955,56601
  • 53955 - Lysozyme-like
  • 56601 - beta-lactamase/transpeptidase-like
  • 0Direct
    51984,53623
  • 51984 - MurCD N-terminal domain
  • 53623 - MurD-like peptide ligases, catalytic domain
  • 0Direct
    63418,53623
  • 63418 - MurE/MurF N-terminal domain
  • 53623 - MurD-like peptide ligases, catalytic domain
  • 0Direct
    56519,56601
  • 56519 - Penicillin binding protein dimerisation domain
  • 56601 - beta-lactamase/transpeptidase-like
  • 0Direct
    53623,53244
  • 53623 - MurD-like peptide ligases, catalytic domain
  • 53244 - MurD-like peptide ligases, peptide-binding domain
  • 0Direct
    56601,54184
  • 56601 - beta-lactamase/transpeptidase-like
  • 54184 - Penicillin-binding protein 2x (pbp-2x), c-terminal domain
  • 0.000000000001158Direct
    56176,56194
  • 56176 - FAD-binding/transporter-associated domain-like
  • 56194 - Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
  • 0.000000000005474Direct
    53681,53681
  • 53681 - Aspartate/glutamate racemase
  • 53681 - Aspartate/glutamate racemase
  • 0.0000000003025Direct
    51419,50621
  • 51419 - PLP-binding barrel
  • 50621 - Alanine racemase C-terminal domain-like
  • 0.0000003434Direct
    52440,56059
  • 52440 - PreATP-grasp domain
  • 56059 - Glutathione synthetase ATP-binding domain-like
  • 0.0000007665Direct
    56601,69189
  • 56601 - beta-lactamase/transpeptidase-like
  • 69189 - Penicillin-binding protein associated domain
  • 0.00000312Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    63418,53623,53244
  • 63418 - MurE/MurF N-terminal domain
  • 53623 - MurD-like peptide ligases, catalytic domain
  • 53244 - MurD-like peptide ligases, peptide-binding domain
  • 0Direct
    51984,53623,53244
  • 51984 - MurCD N-terminal domain
  • 53623 - MurD-like peptide ligases, catalytic domain
  • 53244 - MurD-like peptide ligases, peptide-binding domain
  • 0Direct
    56519,56601,54184
  • 56519 - Penicillin binding protein dimerisation domain
  • 56601 - beta-lactamase/transpeptidase-like
  • 54184 - Penicillin-binding protein 2x (pbp-2x), c-terminal domain
  • 0.000000000001158Direct


    Plot distribution on phylogenetic tree for Individual Supra-domains annotated by this GO term
    Plot tree as:   Download Newick format tree:   Browsing in Tree_gateway:
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