SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Biological Process (BP): epithelial cell migration

(show info)

Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Root: GO Hierarchy Containing Three Sub-Ontologies (BP, MF, CC)

Shortest distance to current term (+ for parents, - for children) GO term [GO ID] <#Children> #High-quality
(SF|FA)
#Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   cellular process [GO:0009987] <21>(372|486) (1162|1371|744)
+ + + + + 5:   biological_process [GO:0008150] <24>
+ + + + + 5:   localization [GO:0051179] <10>(91|101) (503|489|298)
+ + + + + 5:   single-organism cellular process [GO:0044763] <194>(233|302) (895|984|562)
+ + + + 4:   localization of cell [GO:0051674] <3>(10|11) (179|174|122)
+ + + + 4:   locomotion [GO:0040011] <9>(18|18) (222|217|149)
+ + + + 4:   movement of cell or subcellular component [GO:0006928] <5>(15|17) (215|226|151)
+ + + + 4:   multicellular organismal process [GO:0032501] <6>(93|111) (573|658|432)
+ + + + 4:   single-organism process [GO:0044699] <23>(290|375) (996|1199|711)
+ + + 3:   cell motility [GO:0048870] <14>(10|11) (177|173|121)
+ + + 3:   single-multicellular organism process [GO:0044707] <74>(83|99) (548|635|419)
+ + 2:   cell migration [GO:0016477] <33>(10|10) (157|158|112)
+ + 2:   tissue migration [GO:0090130] <3>(0|1) (70|62|37)
+ 1:   ameboidal-type cell migration [GO:0001667] <12>(1|3) (91|89|60)
+ 1:   epithelium migration [GO:0090132] <4>(0|1) (68|60|37)
0:   epithelial cell migration [GO:0010631] <11>(0|1) (61|58|35)
- 1:   epithelial cell migration involved in nephron tubule morphogenesis [GO:0072155] <4>(0|0) (0|0|0)
- 1:   endothelial cell migration [GO:0043542] <3>(0|1) (19|26|20)
- 1:   ovarian follicle cell migration [GO:0007297] <3>(0|0) (31|23|11)
- 1:   intestinal epithelial cell migration [GO:0061582] <1>(0|0) (1|0|0)
- 1:   cell migration involved in mammary placode formation [GO:0060619](0|0) (0|0|0)
- 1:   cell migration involved in prostatic bud elongation [GO:0060518](0|0) (0|0|0)
- 1:   corneal epithelial cell migration [GO:0061581](0|0) (0|0|0)
- 1:   epithelial cell migration, open tracheal system [GO:0007427](0|0) (6|3|0)
- 1:   glomerular visceral epithelial cell migration [GO:0090521](0|0) (0|0|0)
- 1:   keratinocyte migration [GO:0051546](0|0) (2|2|1)
- 1:   melanocyte migration [GO:0097324](0|0) (5|3|2)


Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
G proteins0.10650.5203Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this GO term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
PAH2 domain0Direct
Heparin-binding domain from vascular endothelial growth factor0Direct
Stathmin0.000000000000117Direct
HR1 repeat0.0000000000002285Direct
SRCR-like0.00000000001002Direct
Ypt/Rab-GAP domain of gyp1p0.0000000007209Direct
A middle domain of Talin 10.0000000253Direct
DPP6 N-terminal domain-like0.00000003814Direct
I/LWEQ domain0.0000000903Direct
Tetraspanin0.0000001324Direct
N-terminal domain of cbl (N-cbl)0.000001185Direct
Myosin rod fragments0.000002077Direct
Blood coagulation inhibitor (disintegrin)0.000002987Direct
KA1-like0.000003057Direct
beta-sandwich domain of Sec23/240.00004543Direct
BAR/IMD domain-like0.0001964Direct
Kringle-like0.0002098Direct
PDZ domain-like0.000799Direct
Concanavalin A-like lectins/glucanases0.8143Inherited
Acid proteases0.03097Inherited
Immunoglobulin0.6358Inherited
Alkaline phosphatase-like0.01251Inherited
EGF/Laminin1Inherited
Tudor/PWWP/MBT0.8695Inherited
Intermediate filament protein, coiled coil region0.4491Inherited
FnI-like domain0.004438Inherited
Integrin alpha N-terminal domain0.08258Inherited
Fibronectin type III0.7799Inherited
Interleukin 8-like chemokines0.6219Inherited
Growth factor receptor domain0.6449Inherited
DBL homology domain (DH-domain)1Inherited
Sema domain1Inherited
LDL receptor-like module0.03038Inherited
Cystine-knot cytokines0.05628Inherited
Cupredoxins0.4491Inherited
Galactose-binding domain-like1Inherited
SAM/Pointed domain0.002384Inherited
Bet v1-like0.009939Inherited
GTPase activation domain, GAP0.2484Inherited
Cytokine0.3485Inherited
beta-beta-alpha zinc fingers1Inherited
Protein kinase-like (PK-like)0.001143Inherited
PYP-like sensor domain (PAS domain)0.09898Inherited
A DNA-binding domain in eukaryotic transcription factors0.001109Inherited
Chromo domain-like0.09966Inherited
PH domain-like0.8926Inherited
Second domain of FERM0.03357Inherited
SOCS box-like0.002454Inherited
SAP domain0.007439Inherited
BRK domain-like0.03556Inherited
TPR-like0.03837Inherited
L27 domain0.09754Inherited
Actin depolymerizing proteins0.1633Inherited
Ankyrin repeat0.2033Inherited
alpha-catenin/vinculin-like0.2114Inherited
CRAL/TRIO domain0.2114Inherited
SH2 domain0.4924Inherited
Toll/Interleukin receptor TIR domain0.001034Inherited
SH3-domain0.009745Inherited
(Phosphotyrosine protein) phosphatases II0.04959Inherited
Integrin domains0.5415Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
56487,56487
  • 56487 - SRCR-like
  • 56487 - SRCR-like
  • 0Direct
    46585,46585
  • 46585 - HR1 repeat
  • 46585 - HR1 repeat
  • 0Direct
    48403,48452
  • 48403 - Ankyrin repeat
  • 48452 - TPR-like
  • 0Direct
    81995,55785
  • 81995 - beta-sandwich domain of Sec23/24
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0Direct
    57501,57593
  • 57501 - Cystine-knot cytokines
  • 57593 - Heparin-binding domain from vascular endothelial growth factor
  • 0Direct
    49899,57424
  • 49899 - Concanavalin A-like lectins/glucanases
  • 57424 - LDL receptor-like module
  • 0.0000000000001593Direct
    57424,49899
  • 57424 - LDL receptor-like module
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.0000000000001593Direct
    82171,53474
  • 82171 - DPP6 N-terminal domain-like
  • 53474 - alpha/beta-Hydrolases
  • 0.000000000004644Direct
    109885,47220
  • 109885 - I/LWEQ domain
  • 47220 - alpha-catenin/vinculin-like
  • 0.00000000001935Direct
    57440,57603
  • 57440 - Kringle-like
  • 57603 - FnI-like domain
  • 0.00000000008217Direct
    57603,49265
  • 57603 - FnI-like domain
  • 49265 - Fibronectin type III
  • 0.0000000001239Direct
    57603,57440
  • 57603 - FnI-like domain
  • 57440 - Kringle-like
  • 0.0000000003649Direct
    48726,49899
  • 48726 - Immunoglobulin
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.0000000006735Direct
    57424,48726
  • 57424 - LDL receptor-like module
  • 48726 - Immunoglobulin
  • 0.0000000007988Direct
    48350,55961
  • 48350 - GTPase activation domain, GAP
  • 55961 - Bet v1-like
  • 0.000000003182Direct
    49265,57603
  • 49265 - Fibronectin type III
  • 57603 - FnI-like domain
  • 0.0000000253Direct
    109880,109885
  • 109880 - A middle domain of Talin 1
  • 109885 - I/LWEQ domain
  • 0.0000000253Direct
    90257,90257
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 0.0000000373Direct
    109885,109885
  • 109885 - I/LWEQ domain
  • 109885 - I/LWEQ domain
  • 0.00000004281Direct
    55550,57850
  • 55550 - SH2 domain
  • 57850 - RING/U-box
  • 0.0000009237Direct
    47668,47473
  • 47668 - N-terminal domain of cbl (N-cbl)
  • 47473 - EF-hand
  • 0.0000009237Direct
    47473,55550
  • 47473 - EF-hand
  • 55550 - SH2 domain
  • 0.000001185Direct
    55486,57552
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 57552 - Blood coagulation inhibitor (disintegrin)
  • 0.000001415Direct
    50044,51695
  • 50044 - SH3-domain
  • 51695 - PLC-like phosphodiesterases
  • 0.000001864Direct
    47923,47923
  • 47923 - Ypt/Rab-GAP domain of gyp1p
  • 47923 - Ypt/Rab-GAP domain of gyp1p
  • 0.000003044Direct
    57440,57440
  • 57440 - Kringle-like
  • 57440 - Kringle-like
  • 0.000004111Direct
    55550,55550
  • 55550 - SH2 domain
  • 55550 - SH2 domain
  • 0.000006362Direct
    57184,57603
  • 57184 - Growth factor receptor domain
  • 57603 - FnI-like domain
  • 0.00000652Direct
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.000009854Direct
    52047,52058
  • 52047 - RNI-like
  • 52058 - L domain-like
  • 0.00005788Direct
    55550,158235
  • 55550 - SH2 domain
  • 158235 - SOCS box-like
  • 0.00007328Direct
    52058,52047
  • 52058 - L domain-like
  • 52047 - RNI-like
  • 0.00007899Direct
    52058,52058
  • 52058 - L domain-like
  • 52058 - L domain-like
  • 0.00008518Direct
    55486,82895
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 82895 - TSP-1 type 1 repeat
  • 0.0001851Direct
    81383,50978
  • 81383 - F-box domain
  • 50978 - WD40 repeat-like
  • 0.0007492Direct
    49899,49899
  • 49899 - Concanavalin A-like lectins/glucanases
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.9435Inherited
    50729,50729
  • 50729 - PH domain-like
  • 50729 - PH domain-like
  • 0.004703Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.06673Inherited
    57196,69687
  • 57196 - EGF/Laminin
  • 69687 - Integrin beta tail domain
  • 0.6219Inherited
    101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 1Inherited
    48065,50729
  • 48065 - DBL homology domain (DH-domain)
  • 50729 - PH domain-like
  • 1Inherited
    57196,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.03586Inherited
    57603,57603
  • 57603 - FnI-like domain
  • 57603 - FnI-like domain
  • 0.02838Inherited
    82895,82895
  • 82895 - TSP-1 type 1 repeat
  • 82895 - TSP-1 type 1 repeat
  • 0.006312Inherited
    57196,49899
  • 57196 - EGF/Laminin
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.05174Inherited
    57424,57424
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 0.2484Inherited
    49899,57196
  • 49899 - Concanavalin A-like lectins/glucanases
  • 57196 - EGF/Laminin
  • 0.05803Inherited
    49265,49265
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 1Inherited
    57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.9933Inherited
    47031,50729
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.02223Inherited
    54160,54160
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 0.09966Inherited
    51695,49562
  • 51695 - PLC-like phosphodiesterases
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 0.003962Inherited
    50044,50044
  • 50044 - SH3-domain
  • 50044 - SH3-domain
  • 0.05269Inherited
    54160,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.09966Inherited
    47220,47220
  • 47220 - alpha-catenin/vinculin-like
  • 47220 - alpha-catenin/vinculin-like
  • 0.2114Inherited
    50156,50156
  • 50156 - PDZ domain-like
  • 50156 - PDZ domain-like
  • 0.4138Inherited
    69318,69179
  • 69318 - Integrin alpha N-terminal domain
  • 69179 - Integrin domains
  • 0.3963Inherited
    69179,69179
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.5172Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    46585,46585,46585
  • 46585 - HR1 repeat
  • 46585 - HR1 repeat
  • 46585 - HR1 repeat
  • 0Direct
    56487,56487,56487
  • 56487 - SRCR-like
  • 56487 - SRCR-like
  • 56487 - SRCR-like
  • 0Direct
    57196,49899,57196
  • 57196 - EGF/Laminin
  • 49899 - Concanavalin A-like lectins/glucanases
  • 57196 - EGF/Laminin
  • 0Direct
    49899,57424,49899
  • 49899 - Concanavalin A-like lectins/glucanases
  • 57424 - LDL receptor-like module
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.00000000000008156Direct
    109885,109885,47220
  • 109885 - I/LWEQ domain
  • 109885 - I/LWEQ domain
  • 47220 - alpha-catenin/vinculin-like
  • 0.00000000001935Direct
    109885,47220,47220
  • 109885 - I/LWEQ domain
  • 47220 - alpha-catenin/vinculin-like
  • 47220 - alpha-catenin/vinculin-like
  • 0.00000000001935Direct
    48726,49899,57196
  • 48726 - Immunoglobulin
  • 49899 - Concanavalin A-like lectins/glucanases
  • 57196 - EGF/Laminin
  • 0.0000000000548Direct
    109885,109885,109885
  • 109885 - I/LWEQ domain
  • 109885 - I/LWEQ domain
  • 109885 - I/LWEQ domain
  • 0.00000000006403Direct
    49899,57196,49899
  • 49899 - Concanavalin A-like lectins/glucanases
  • 57196 - EGF/Laminin
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.00000000007202Direct
    57440,57440,57603
  • 57440 - Kringle-like
  • 57440 - Kringle-like
  • 57603 - FnI-like domain
  • 0.00000000008217Direct
    57440,57603,57603
  • 57440 - Kringle-like
  • 57603 - FnI-like domain
  • 57603 - FnI-like domain
  • 0.00000000008217Direct
    57603,57603,57440
  • 57603 - FnI-like domain
  • 57603 - FnI-like domain
  • 57440 - Kringle-like
  • 0.00000000008217Direct
    57603,57603,49265
  • 57603 - FnI-like domain
  • 57603 - FnI-like domain
  • 49265 - Fibronectin type III
  • 0.00000000008217Direct
    57603,57440,57440
  • 57603 - FnI-like domain
  • 57440 - Kringle-like
  • 57440 - Kringle-like
  • 0.0000000003649Direct
    48726,48726,49899
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.000000000565Direct
    57424,57424,48726
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 48726 - Immunoglobulin
  • 0.0000000006735Direct
    52047,52058,52058
  • 52047 - RNI-like
  • 52058 - L domain-like
  • 52058 - L domain-like
  • 0.000000003598Direct
    52058,52047,52058
  • 52058 - L domain-like
  • 52047 - RNI-like
  • 52058 - L domain-like
  • 0.00000002269Direct
    109880,109885,109885
  • 109880 - A middle domain of Talin 1
  • 109885 - I/LWEQ domain
  • 109885 - I/LWEQ domain
  • 0.0000000253Direct
    49265,57603,57603
  • 49265 - Fibronectin type III
  • 57603 - FnI-like domain
  • 57603 - FnI-like domain
  • 0.0000000253Direct
    47031,50729,50729
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 50729 - PH domain-like
  • 0.00000007592Direct
    47668,47473,55550
  • 47668 - N-terminal domain of cbl (N-cbl)
  • 47473 - EF-hand
  • 55550 - SH2 domain
  • 0.0000009237Direct
    47473,55550,57850
  • 47473 - EF-hand
  • 55550 - SH2 domain
  • 57850 - RING/U-box
  • 0.0000009237Direct
    90257,90257,90257
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 0.0000009618Direct
    50044,51695,49562
  • 50044 - SH3-domain
  • 51695 - PLC-like phosphodiesterases
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 0.000001864Direct
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.00112Inherited
    69179,69179,69179
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.6272Inherited
    57196,57196,69687
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 69687 - Integrin beta tail domain
  • 0.6219Inherited
    57603,57603,57603
  • 57603 - FnI-like domain
  • 57603 - FnI-like domain
  • 57603 - FnI-like domain
  • 0.02838Inherited
    49265,49265,49265
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 1Inherited
    82895,82895,82895
  • 82895 - TSP-1 type 1 repeat
  • 82895 - TSP-1 type 1 repeat
  • 82895 - TSP-1 type 1 repeat
  • 0.002651Inherited
    57424,57424,57424
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 0.2484Inherited
    54160,52540,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.09966Inherited
    54160,54160,52540
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.09966Inherited
    69318,69179,69179
  • 69318 - Integrin alpha N-terminal domain
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.3963Inherited


    Plot distribution on phylogenetic tree for Individual Supra-domains annotated by this GO term
    Plot tree as:   Download Newick format tree:   Browsing in Tree_gateway:
    (show help)