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Biological Process (BP): endosomal transport

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Root: GO Hierarchy Containing Three Sub-Ontologies (BP, MF, CC)

Shortest distance to current term (+ for parents, - for children) GO term [GO ID] <#Children> #High-quality
(SF|FA)
#Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   biological_process [GO:0008150] <24>
+ + + 3:   establishment of localization [GO:0051234] <6>(78|88) (409|348|184)
+ + + 3:   localization [GO:0051179] <10>(91|101) (503|489|298)
+ + 2:   cellular localization [GO:0051641] <12>(36|37) (304|235|116)
+ + 2:   establishment of localization in cell [GO:0051649] <23>(30|31) (237|169|72)
+ + 2:   transport [GO:0006810] <14>(76|87) (402|340|182)
+ 1:   intracellular transport [GO:0046907] <21>(27|28) (209|144|62)
0:   endosomal transport [GO:0016197] <15>(2|2) (45|35|13)
- 1:   endocytic recycling [GO:0032456] <3>(1|1) (7|5|3)
- 1:   endosome to lysosome transport [GO:0008333] <3>(0|0) (11|7|2)
- 1:   endosome transport via multivesicular body sorting pathway [GO:0032509] <3>(0|0) (18|12|7)
- 1:   retrograde transport, endosome to Golgi [GO:0042147] <3>(2|2) (7|5|0)
- 1:   synaptic vesicle endosomal processing [GO:0099532] <3>(0|0) (0|0|0)
- 1:   late endosome to vacuole transport [GO:0045324] <2>(0|0) (9|3|1)
- 1:   Golgi to endosome transport [GO:0006895] <1>(0|0) (2|2|0)
- 1:   endosome to pigment granule transport [GO:0043485] <1>(0|0) (1|0|0)
- 1:   late endosome to lysosome transport [GO:1902774] <1>(0|0) (0|0|0)
- 1:   retrograde transport, endosome to plasma membrane [GO:1990126] <1>(1|1) (6|6|3)
- 1:   early endosome to late endosome transport [GO:0045022](0|0) (5|3|1)
- 1:   early endosome to recycling endosome transport [GO:0061502](0|0) (1|0|0)
- 1:   neurotransmitter receptor transport postsynaptic membrane to endosome [GO:0098968](0|0) (0|0|0)
- 1:   neurotransmitter receptor transport, plasma membrane to endosome [GO:0099646](0|0) (0|0|0)
- 1:   trans-Golgi network to recycling endosome transport [GO:0044795](0|0) (1|0|0)


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Superfamily

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
P-loop containing nucleoside triphosphate hydrolases00.000001159Direct
Metallo-dependent phosphatases0.000007660.001865Inherited


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Family

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
G proteins00.000000000003371Direct
YfcE-like0.000000001850.000000002479Direct


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Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
PX domain0Direct
UBC-like0.000000000000771Direct
Eferin C-derminal domain-like0.00000001996Direct
BAR/IMD domain-like0.0000000364Direct
Endosomal sorting complex assembly domain0.00000004458Direct
Rabenosyn-5 Rab-binding domain-like0.00000009407Direct
WW domain0.0000003513Direct
P-loop containing nucleoside triphosphate hydrolases0.0000007427Direct
Hect, E3 ligase catalytic domain0.000001278Direct
BEACH domain0.000001278Direct
PUG domain-like0.000002838Direct
VPS9 domain0.000007881Direct
(Phosphotyrosine protein) phosphatases II0.000008635Direct
Tetraspanin0.0000244Direct
ENTH/VHS domain0.00002994Direct
Myosin rod fragments0.00003033Direct
Ypt/Rab-GAP domain of gyp1p0.0001499Direct
MIT domain0.0001695Direct
RING/U-box0.0002408Direct
Cullin repeat-like0.0002865Direct
Ubiquitin-like0.0009323Direct
Metallo-dependent phosphatases0.001342Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.3955Inherited
Cadherin-like0.003247Inherited
Concanavalin A-like lectins/glucanases0.04687Inherited
PDZ domain-like1Inherited
Acetyl-CoA synthetase-like0.04469Inherited
WD40 repeat-like0.001948Inherited
GAT-like domain0.01336Inherited
Hook domain0.002438Inherited
Protein kinase-like (PK-like)0.4868Inherited
SNARE fusion complex0.0097Inherited
t-snare proteins0.2528Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)1Inherited
ADC-like0.01336Inherited
Cdc48 domain 2-like0.01904Inherited
"Winged helix" DNA-binding domain0.2286Inherited
Calponin-homology domain, CH-domain0.001222Inherited
EF-hand0.09172Inherited
Spectrin repeat0.2229Inherited
PH domain-like0.005807Inherited
SH3-domain0.04131Inherited
SNARE-like0.2576Inherited
Galactose oxidase, central domain0.005233Inherited
POZ domain0.01216Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
64268,103657
  • 64268 - PX domain
  • 103657 - BAR/IMD domain-like
  • 0Direct
    48464,57903
  • 48464 - ENTH/VHS domain
  • 57903 - FYVE/PHD zinc finger
  • 0.000000000001468Direct
    47576,57716
  • 47576 - Calponin-homology domain, CH-domain
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.000000000001468Direct
    56112,50998
  • 56112 - Protein kinase-like (PK-like)
  • 50998 - Quinoprotein alcohol dehydrogenase-like
  • 0.0000000009683Direct
    143503,54236
  • 143503 - PUG domain-like
  • 54236 - Ubiquitin-like
  • 0.0000000009683Direct
    47473,90257
  • 47473 - EF-hand
  • 90257 - Myosin rod fragments
  • 0.000000001582Direct
    56112,54236
  • 56112 - Protein kinase-like (PK-like)
  • 54236 - Ubiquitin-like
  • 0.00000001268Direct
    49313,49899
  • 49313 - Cadherin-like
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.00000002485Direct
    50729,52799
  • 50729 - PH domain-like
  • 52799 - (Phosphotyrosine protein) phosphatases II
  • 0.0000000569Direct
    51045,56204
  • 51045 - WW domain
  • 56204 - Hect, E3 ligase catalytic domain
  • 0.00000006898Direct
    51045,51045
  • 51045 - WW domain
  • 51045 - WW domain
  • 0.00000006898Direct
    50729,74788
  • 50729 - PH domain-like
  • 74788 - Cullin repeat-like
  • 0.00000009407Direct
    46565,48371
  • 46565 - Chaperone J-domain
  • 48371 - ARM repeat
  • 0.00000009407Direct
    116846,52540
  • 116846 - MIT domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.000007881Direct
    46785,46785
  • 46785 - "Winged helix" DNA-binding domain
  • 46785 - "Winged helix" DNA-binding domain
  • 0.00002544Direct
    46966,50044
  • 46966 - Spectrin repeat
  • 50044 - SH3-domain
  • 0.00004798Direct
    47923,47923
  • 47923 - Ypt/Rab-GAP domain of gyp1p
  • 47923 - Ypt/Rab-GAP domain of gyp1p
  • 0.0001499Direct
    56112,81837
  • 56112 - Protein kinase-like (PK-like)
  • 81837 - BEACH domain
  • 0.0002449Direct
    50729,81837
  • 50729 - PH domain-like
  • 81837 - BEACH domain
  • 0.0007455Direct
    57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.05348Inherited
    49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.001845Inherited
    64268,54236
  • 64268 - PX domain
  • 54236 - Ubiquitin-like
  • 0.003152Inherited
    50156,64268
  • 50156 - PDZ domain-like
  • 64268 - PX domain
  • 0.003152Inherited
    49562,48371
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 48371 - ARM repeat
  • 0.006806Inherited
    48371,56112
  • 48371 - ARM repeat
  • 56112 - Protein kinase-like (PK-like)
  • 0.02101Inherited
    47661,58038
  • 47661 - t-snare proteins
  • 58038 - SNARE fusion complex
  • 0.005775Inherited
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.1918Inherited
    54585,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.003503Inherited
    50692,54585
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
  • 0.01336Inherited
    50044,46966
  • 50044 - SH3-domain
  • 46966 - Spectrin repeat
  • 0.001131Inherited
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.08546Inherited
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.9679Inherited
    64356,58038
  • 64356 - SNARE-like
  • 58038 - SNARE fusion complex
  • 0.003428Inherited
    54695,50965
  • 54695 - POZ domain
  • 50965 - Galactose oxidase, central domain
  • 0.005233Inherited
    64356,49447
  • 64356 - SNARE-like
  • 49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
  • 0.106Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    47576,57716,57716
  • 47576 - Calponin-homology domain, CH-domain
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.0000000000005103Direct
    47473,47473,90257
  • 47473 - EF-hand
  • 47473 - EF-hand
  • 90257 - Myosin rod fragments
  • 0.0000000002135Direct
    50044,46966,46966
  • 50044 - SH3-domain
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.0000000008906Direct
    49313,49313,49899
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.00000001832Direct
    51045,51045,56204
  • 51045 - WW domain
  • 51045 - WW domain
  • 56204 - Hect, E3 ligase catalytic domain
  • 0.00000006898Direct
    46966,46966,50044
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 50044 - SH3-domain
  • 0.00004798Direct
    50156,64268,54236
  • 50156 - PDZ domain-like
  • 64268 - PX domain
  • 54236 - Ubiquitin-like
  • 0.003152Inherited
    49562,48371,56112
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 48371 - ARM repeat
  • 56112 - Protein kinase-like (PK-like)
  • 0.006806Inherited
    50692,54585,52540
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.003503Inherited
    54585,52540,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.003503Inherited
    47473,47473,47473
  • 47473 - EF-hand
  • 47473 - EF-hand
  • 47473 - EF-hand
  • 0.0641Inherited
    46966,50044,46966
  • 46966 - Spectrin repeat
  • 50044 - SH3-domain
  • 46966 - Spectrin repeat
  • 0.001131Inherited
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.03604Inherited


    Plot distribution on phylogenetic tree for Individual Supra-domains annotated by this GO term
    Plot tree as:   Download Newick format tree:   Browsing in Tree_gateway:
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