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Biological Process (BP): cytosolic transport

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Root: GO Hierarchy Containing Three Sub-Ontologies (BP, MF, CC)

Shortest distance to current term (+ for parents, - for children) GO term [GO ID] <#Children> #High-quality
(SF|FA)
#Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   biological_process [GO:0008150] <24>
+ + + 3:   establishment of localization [GO:0051234] <6>(78|88) (409|348|184)
+ + + 3:   localization [GO:0051179] <10>(91|101) (503|489|298)
+ + 2:   cellular localization [GO:0051641] <12>(36|37) (304|235|116)
+ + 2:   establishment of localization in cell [GO:0051649] <23>(30|31) (237|169|72)
+ + 2:   transport [GO:0006810] <14>(76|87) (402|340|182)
+ 1:   intracellular transport [GO:0046907] <21>(27|28) (209|144|62)
0:   cytosolic transport [GO:0016482] <10>(2|2) (19|12|2)
- 1:   retrograde transport, endosome to Golgi [GO:0042147] <3>(2|2) (7|5|0)
- 1:   vesicle-mediated cholesterol transport [GO:0090119] <3>(0|0) (1|1|0)
- 1:   Golgi to endosome transport [GO:0006895] <1>(0|0) (2|2|0)
- 1:   cytoplasmic transport, nurse cell to oocyte [GO:0007303] <1>(0|0) (2|1|1)
- 1:   dense core granule transport [GO:1901950] <1>(0|0) (0|0|0)
- 1:   Golgi to lysosome transport [GO:0090160](0|0) (0|0|0)
- 1:   cytoplasmic streaming [GO:0099636](0|0) (0|0|0)
- 1:   early endosome to late endosome transport [GO:0045022](0|0) (5|3|1)
- 1:   early endosome to recycling endosome transport [GO:0061502](0|0) (1|0|0)
- 1:   plastid to vacuole vesicle-mediated transport [GO:1904962](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
Metallo-dependent phosphatases0.00086670.01538Inherited
P-loop containing nucleoside triphosphate hydrolases0.000000013510.01684Inherited


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Family

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
G proteins0.0000000096760.0000009879Direct
YfcE-like0.000043770.00005285Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this GO term
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Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
PX domain0Direct
BAR/IMD domain-like0.000000002187Direct
UBC-like0.00000006931Direct
Spectrin repeat0.0000001747Direct
Ypt/Rab-GAP domain of gyp1p0.0000008688Direct
Hook domain0.000008936Direct
Myosin rod fragments0.0001744Direct
POZ domain0.0001906Direct
Galactose oxidase, central domain0.0004985Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.8361Inherited
Acetyl-CoA synthetase-like0.002789Inherited
BEACH domain0.001144Inherited
WD40 repeat-like0.001258Inherited
Protein kinase-like (PK-like)0.1795Inherited
Metallo-dependent phosphatases0.01156Inherited
P-loop containing nucleoside triphosphate hydrolases0.01268Inherited
SNARE fusion complex0.03536Inherited
t-snare proteins0.05093Inherited
Calponin-homology domain, CH-domain0.001239Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
64268,103657
  • 64268 - PX domain
  • 103657 - BAR/IMD domain-like
  • 0Direct
    56112,50998
  • 56112 - Protein kinase-like (PK-like)
  • 50998 - Quinoprotein alcohol dehydrogenase-like
  • 0.00000000008017Direct
    47923,47923
  • 47923 - Ypt/Rab-GAP domain of gyp1p
  • 47923 - Ypt/Rab-GAP domain of gyp1p
  • 0.0000008688Direct
    56112,81837
  • 56112 - Protein kinase-like (PK-like)
  • 81837 - BEACH domain
  • 0.0000116Direct
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.00006943Direct
    47661,58038
  • 47661 - t-snare proteins
  • 58038 - SNARE fusion complex
  • 0.0001354Direct
    49562,48371
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 48371 - ARM repeat
  • 0.0004055Direct
    54695,50965
  • 54695 - POZ domain
  • 50965 - Galactose oxidase, central domain
  • 0.0004985Direct
    49562,49562
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 0.5377Inherited
    48371,56112
  • 48371 - ARM repeat
  • 56112 - Protein kinase-like (PK-like)
  • 0.001432Inherited
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.008301Inherited
    64356,49447
  • 64356 - SNARE-like
  • 49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
  • 0.06525Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    49562,48371,56112
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 48371 - ARM repeat
  • 56112 - Protein kinase-like (PK-like)
  • 0.0004055Direct
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.006878Inherited


    Plot distribution on phylogenetic tree for Individual Supra-domains annotated by this GO term
    Plot tree as:   Download Newick format tree:   Browsing in Tree_gateway:
    (show help)