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Biological Process (BP): regulation of endocytosis

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Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Root: GO Hierarchy Containing Three Sub-Ontologies (BP, MF, CC)

Shortest distance to current term (+ for parents, - for children) GO term [GO ID] <#Children> #High-quality
(SF|FA)
#Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   biological_process [GO:0008150] <24>
+ + + + 4:   biological regulation [GO:0065007] <5>(165|190) (757|933|542)
+ + + 3:   regulation of biological process [GO:0050789] <34>(155|176) (709|883|505)
+ + + 3:   regulation of localization [GO:0032879] <12>(39|41) (298|273|160)
+ + 2:   regulation of cellular process [GO:0050794] <58>(138|154) (661|802|451)
+ + 2:   regulation of transport [GO:0051049] <38>(34|35) (239|184|102)
+ 1:   regulation of cellular component organization [GO:0051128] <52>(35|32) (311|310|174)
+ 1:   regulation of vesicle-mediated transport [GO:0060627] <18>(8|8) (85|64|38)
0:   regulation of endocytosis [GO:0030100] <8>(2|2) (54|50|31)
- 1:   regulation of phagocytosis [GO:0050764] <7>(1|1) (24|14|10)
- 1:   regulation of receptor-mediated endocytosis [GO:0048259] <6>(1|1) (24|22|16)
- 1:   negative regulation of endocytosis [GO:0045806] <5>(0|0) (9|6|1)
- 1:   positive regulation of endocytosis [GO:0045807] <5>(2|2) (35|29|15)
- 1:   regulation of pinocytosis [GO:0048548] <3>(1|1) (2|0|0)
- 1:   regulation of caveolin-mediated endocytosis [GO:2001286] <2>(0|0) (1|0|0)
- 1:   regulation of ubiquitin-dependent endocytosis [GO:2000395] <2>(0|0) (0|0|0)
- 1:   regulation of endocytosis by exocyst localization [GO:0051600](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
4-helical cytokines00Direct
alpha/beta-Hydrolases0.01470.7107Inherited


Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
Long-chain cytokines00Direct
Thioesterases0.00000000000001080.000000000002531Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this GO term
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Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
4-helical cytokines0Direct
GLA-domain0.00000000000207Direct
Heparin-binding domain from vascular endothelial growth factor0.000000000005854Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.000000000132Direct
BAR/IMD domain-like0.000000001211Direct
RAP domain-like0.000000001703Direct
SH3-domain0.000000009494Direct
TNF-like0.00000001919Direct
Cystatin/monellin0.00000004044Direct
ENTH/VHS domain0.00000005035Direct
Triple coiled coil domain of C-type lectins0.0000001784Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0.0000004426Direct
Lipoxigenase0.0000006215Direct
Anaphylotoxins (complement system)0.000000799Direct
WW domain0.0000008632Direct
Tubby C-terminal domain-like0.000002149Direct
Lipovitellin-phosvitin complex, superhelical domain0.000004873Direct
I/LWEQ domain0.000007307Direct
SH2 domain0.000007843Direct
GAT-like domain0.00001074Direct
Tetraspanin0.00001148Direct
Alpha-macroglobulin receptor domain0.00001485Direct
Mib/herc2 domain-like0.00001777Direct
Lipase/lipooxygenase domain (PLAT/LH2 domain)0.00002349Direct
Concanavalin A-like lectins/glucanases0.00003032Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.0001086Direct
E set domains0.0001504Direct
Growth factor receptor domain0.0002438Direct
Notch domain0.0002628Direct
Eukaryotic type KH-domain (KH-domain type I)0.000494Direct
Terpenoid cyclases/Protein prenyltransferases0.01038Inherited
TIMP-like0.05545Inherited
PH domain-like0.3075Inherited
Protein kinase-like (PK-like)1Inherited
ARM repeat0.6438Inherited
Quinoprotein alcohol dehydrogenase-like0.1803Inherited
Ankyrin repeat0.01049Inherited
P-loop containing nucleoside triphosphate hydrolases0.08705Inherited
L domain-like0.7712Inherited
GTPase activation domain, GAP0.3853Inherited
Cytokine0.0296Inherited
DEATH domain0.5751Inherited
Calponin-homology domain, CH-domain1Inherited
Ras GEF0.2915Inherited
Myosin rod fragments0.3631Inherited
Immunoglobulin0.6854Inherited
Integrin alpha N-terminal domain0.007633Inherited
alpha/beta-Hydrolases0.619Inherited
Wiscott-Aldrich syndrome protein, WASP, C-terminal domain0.01032Inherited
Cystine-knot cytokines0.3381Inherited
WD40 repeat-like0.09844Inherited
PDZ domain-like0.001971Inherited
Metal cation-transporting ATPase, ATP-binding domain N0.008696Inherited
PX domain0.00134Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57630,57184
  • 57630 - GLA-domain
  • 57184 - Growth factor receptor domain
  • 0Direct
    52540,51045
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 51045 - WW domain
  • 0Direct
    50156,103657
  • 50156 - PDZ domain-like
  • 103657 - BAR/IMD domain-like
  • 0.0000000000003254Direct
    48403,74924
  • 48403 - Ankyrin repeat
  • 74924 - Cap-Gly domain
  • 0.000000000001202Direct
    57501,57593
  • 57501 - Cystine-knot cytokines
  • 57593 - Heparin-binding domain from vascular endothelial growth factor
  • 0.000000000005854Direct
    54403,54403
  • 54403 - Cystatin/monellin
  • 54403 - Cystatin/monellin
  • 0.0000000000208Direct
    51045,50156
  • 51045 - WW domain
  • 50156 - PDZ domain-like
  • 0.0000000000208Direct
    49899,49899
  • 49899 - Concanavalin A-like lectins/glucanases
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.00000000004369Direct
    51045,51045
  • 51045 - WW domain
  • 51045 - WW domain
  • 0.0000000001833Direct
    56112,50998
  • 56112 - Protein kinase-like (PK-like)
  • 50998 - Quinoprotein alcohol dehydrogenase-like
  • 0.000000001703Direct
    47045,47045
  • 47045 - RAP domain-like
  • 47045 - RAP domain-like
  • 0.000000001703Direct
    159034,57850
  • 159034 - Mib/herc2 domain-like
  • 57850 - RING/U-box
  • 0.0000000018Direct
    57850,159034
  • 57850 - RING/U-box
  • 159034 - Mib/herc2 domain-like
  • 0.0000000018Direct
    47769,57850
  • 47769 - SAM/Pointed domain
  • 57850 - RING/U-box
  • 0.000000007852Direct
    50156,50156
  • 50156 - PDZ domain-like
  • 50156 - PDZ domain-like
  • 0.00000006121Direct
    57944,56436
  • 57944 - Triple coiled coil domain of C-type lectins
  • 56436 - C-type lectin-like
  • 0.0000001784Direct
    49410,50242
  • 49410 - Alpha-macroglobulin receptor domain
  • 50242 - TIMP-like
  • 0.0000002216Direct
    49723,48484
  • 49723 - Lipase/lipooxygenase domain (PLAT/LH2 domain)
  • 48484 - Lipoxigenase
  • 0.0000006215Direct
    48431,56968
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 0.000001087Direct
    50156,52540
  • 50156 - PDZ domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00000599Direct
    48464,89009
  • 48464 - ENTH/VHS domain
  • 89009 - GAT-like domain
  • 0.00001074Direct
    55550,55550
  • 55550 - SH2 domain
  • 55550 - SH2 domain
  • 0.00001385Direct
    54791,54791
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 54791 - Eukaryotic type KH-domain (KH-domain type I)
  • 0.00004431Direct
    57184,49899
  • 57184 - Growth factor receptor domain
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.00004431Direct
    57630,57196
  • 57630 - GLA-domain
  • 57196 - EGF/Laminin
  • 0.00004853Direct
    55550,56112
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.00008193Direct
    50044,55550
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.00009334Direct
    57184,57196
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 0.0001322Direct
    50729,47912
  • 50729 - PH domain-like
  • 47912 - Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
  • 0.0001673Direct
    57196,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.0002469Direct
    90193,90193
  • 90193 - Notch domain
  • 90193 - Notch domain
  • 0.0002628Direct
    57196,90193
  • 57196 - EGF/Laminin
  • 90193 - Notch domain
  • 0.0002628Direct
    49562,56112
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 56112 - Protein kinase-like (PK-like)
  • 0.000362Direct
    49562,48371
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 48371 - ARM repeat
  • 0.0003959Direct
    57184,57184
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0.0006997Direct
    47986,47986
  • 47986 - DEATH domain
  • 47986 - DEATH domain
  • 0.001196Inherited
    57196,49899
  • 57196 - EGF/Laminin
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.02442Inherited
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.3949Inherited
    69179,69179
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.001794Inherited
    69318,69179
  • 69318 - Integrin alpha N-terminal domain
  • 69179 - Integrin domains
  • 0.007633Inherited
    50044,52540
  • 50044 - SH3-domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.1604Inherited
    50156,50044
  • 50156 - PDZ domain-like
  • 50044 - SH3-domain
  • 0.1604Inherited
    57889,49562
  • 57889 - Cysteine-rich domain
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 0.001952Inherited
    57889,57889
  • 57889 - Cysteine-rich domain
  • 57889 - Cysteine-rich domain
  • 0.1225Inherited
    49562,51045
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 51045 - WW domain
  • 0.00179Inherited
    74924,74924
  • 74924 - Cap-Gly domain
  • 74924 - Cap-Gly domain
  • 0.002672Inherited
    48371,56112
  • 48371 - ARM repeat
  • 56112 - Protein kinase-like (PK-like)
  • 0.005305Inherited
    51045,56204
  • 51045 - WW domain
  • 56204 - Hect, E3 ligase catalytic domain
  • 0.007633Inherited
    81660,56784
  • 81660 - Metal cation-transporting ATPase, ATP-binding domain N
  • 56784 - HAD-like
  • 0.007773Inherited
    49562,49562
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 0.01076Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57630,57196,57184
  • 57630 - GLA-domain
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0Direct
    48403,74924,74924
  • 48403 - Ankyrin repeat
  • 74924 - Cap-Gly domain
  • 74924 - Cap-Gly domain
  • 0Direct
    52540,51045,51045
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 51045 - WW domain
  • 51045 - WW domain
  • 0Direct
    51045,51045,50156
  • 51045 - WW domain
  • 51045 - WW domain
  • 50156 - PDZ domain-like
  • 0Direct
    57630,57184,49899
  • 57630 - GLA-domain
  • 57184 - Growth factor receptor domain
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.0000000000003167Direct
    47045,47045,47045
  • 47045 - RAP domain-like
  • 47045 - RAP domain-like
  • 47045 - RAP domain-like
  • 0.000000001703Direct
    159034,57850,159034
  • 159034 - Mib/herc2 domain-like
  • 57850 - RING/U-box
  • 159034 - Mib/herc2 domain-like
  • 0.0000000018Direct
    57184,49899,49899
  • 57184 - Growth factor receptor domain
  • 49899 - Concanavalin A-like lectins/glucanases
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.000000002038Direct
    57184,57196,49899
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.000000007852Direct
    57630,57184,57196
  • 57630 - GLA-domain
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 0.000000007852Direct
    50156,52540,51045
  • 50156 - PDZ domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 51045 - WW domain
  • 0.000001139Direct
    50044,55550,56112
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.000008382Direct
    49899,49899,49899
  • 49899 - Concanavalin A-like lectins/glucanases
  • 49899 - Concanavalin A-like lectins/glucanases
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.00009421Direct
    49562,48371,56112
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 48371 - ARM repeat
  • 56112 - Protein kinase-like (PK-like)
  • 0.0002054Direct
    57889,57889,49562
  • 57889 - Cysteine-rich domain
  • 57889 - Cysteine-rich domain
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 0.0002504Direct
    57196,57196,90193
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 90193 - Notch domain
  • 0.0002628Direct
    57196,90193,90193
  • 57196 - EGF/Laminin
  • 90193 - Notch domain
  • 90193 - Notch domain
  • 0.0002628Direct
    90193,90193,90193
  • 90193 - Notch domain
  • 90193 - Notch domain
  • 90193 - Notch domain
  • 0.0002628Direct
    57889,49562,56112
  • 57889 - Cysteine-rich domain
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 56112 - Protein kinase-like (PK-like)
  • 0.000267Direct
    57196,49899,49899
  • 57196 - EGF/Laminin
  • 49899 - Concanavalin A-like lectins/glucanases
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.002111Inherited
    57196,57184,49899
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.03877Inherited
    69318,69179,69179
  • 69318 - Integrin alpha N-terminal domain
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.007633Inherited
    69179,69179,69179
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.01544Inherited
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.6494Inherited
    50156,50044,52540
  • 50156 - PDZ domain-like
  • 50044 - SH3-domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.1604Inherited
    57184,57184,57196
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 0.00365Inherited
    57196,57184,57196
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 0.00365Inherited
    57196,57184,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0.00365Inherited
    57184,57196,57196
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.003731Inherited
    81660,56784,81665
  • 81660 - Metal cation-transporting ATPase, ATP-binding domain N
  • 56784 - HAD-like
  • 81665 - Calcium ATPase, transmembrane domain M
  • 0.006747Inherited
    51045,51045,56204
  • 51045 - WW domain
  • 51045 - WW domain
  • 56204 - Hect, E3 ligase catalytic domain
  • 0.007633Inherited


    Plot distribution on phylogenetic tree for Individual Supra-domains annotated by this GO term
    Plot tree as:   Download Newick format tree:   Browsing in Tree_gateway:
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