SUPERFAMILY 1.75 HMM library and genome assignments server

Biological Process (BP): regulation of ion transmembrane transport

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Root: GO Hierarchy Containing Three Sub-Ontologies (BP, MF, CC)

Shortest distance to current term (+ for parents, - for children) GO term [GO ID] <#Children> #High-quality
(SF|FA)
#Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   biological_process [GO:0008150] <20>
+ + + + 4:   biological regulation [GO:0065007] <3>(206|235) (732|896|528)
+ + + 3:   regulation of biological process [GO:0050789] <31>(194|219) (682|832|491)
+ + + 3:   regulation of localization [GO:0032879] <8>(49|52) (283|254|149)
+ + 2:   regulation of cellular process [GO:0050794] <75>(161|182) (641|764|443)
+ + 2:   regulation of transport [GO:0051049] <36>(40|43) (235|180|98)
+ 1:   regulation of ion transport [GO:0043269] <13>(14|13) (93|54|29)
+ 1:   regulation of transmembrane transport [GO:0034762] <7>(6|7) (52|29|14)
0:   regulation of ion transmembrane transport [GO:0034765] <14>(4|5) (45|27|14)
- 1:   regulation of ion transmembrane transporter activity [GO:0032412] <14>(3|3) (31|22|11)
- 1:   negative regulation of ion transmembrane transport [GO:0034766] <10>(1|1) (2|0|0)
- 1:   positive regulation of ion transmembrane transport [GO:0034767] <9>(0|1) (7|7|4)
- 1:   regulation of potassium ion transmembrane transport [GO:1901379] <4>(1|1) (6|2|0)
- 1:   regulation of calcium ion import [GO:0090279] <3>(0|1) (5|6|4)
- 1:   regulation of sodium ion transmembrane transport [GO:1902305] <3>(1|1) (6|5|5)
- 1:   regulation of (R)-carnitine transmembrane transport [GO:1902272] <2>(0|0) (0|0|0)
- 1:   regulation of copper ion transmembrane transport [GO:1902311] <2>(0|0) (0|0|0)
- 1:   regulation of gluconate transmembrane transport [GO:0035430] <2>(0|0) (0|0|0)
- 1:   regulation of iron ion transmembrane transport [GO:0034759] <2>(0|0) (0|0|0)
- 1:   regulation of membrane repolarization [GO:0060306] <2>(0|0) (5|0|0)
- 1:   regulation of phosphate transmembrane transport [GO:2000185] <2>(1|1) (1|0|0)
- 1:   regulation of plasma membrane long-chain fatty acid transport [GO:0010746] <2>(0|0) (1|0|0)
- 1:   regulation of zinc ion transmembrane transport [GO:0071580] <2>(0|0) (0|0|0)


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Superfamily

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
EF-hand0.000042780.000006337Direct
PhoU-like00Direct
WD40 repeat-like0.073440.9233Inherited
NAD(P)-linked oxidoreductase0.011850.001724Inherited


Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
Calmodulin-like0.000710.00002989Direct
PhoU-like00Direct
WD40-repeat0.068120.6819Inherited
Aldo-keto reductases (NADP)0.020230.002721Inherited
Nucleotide and nucleoside kinases0.028970.0003247Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this GO term
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Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
PhoU-like0Direct
Ankyrin repeat0.00000000001434Direct
Prion-like0.00000000812Direct
DEATH domain0.00000001104Direct
Bactericidal permeability-increasing protein, BPI0.0000000829Direct
AF0104/ALDC/Ptd012-like0.0000001836Direct
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain0.0000005145Direct
SAM/Pointed domain0.0000008225Direct
FAT domain of focal adhesion kinase0.0000009859Direct
PDZ domain-like0.000001315Direct
Ras GEF0.000002561Direct
EF-hand0.000004156Direct
WW domain0.0007208Direct
Spermadhesin, CUB domain0.000988Direct
Protein kinase-like (PK-like)0.464Inherited
RING/U-box0.5147Inherited
Second domain of FERM0.01745Inherited
Immunoglobulin0.6691Inherited
Calponin-homology domain, CH-domain0.07592Inherited
WD40 repeat-like0.8215Inherited
DPP6 N-terminal domain-like0.003611Inherited
alpha/beta-Hydrolases0.01446Inherited
NAD(P)-linked oxidoreductase0.001235Inherited
Voltage-gated potassium channels0.06472Inherited
E set domains0.1921Inherited
Family A G protein-coupled receptor-like1Inherited
HD-domain/PDEase-like0.01329Inherited
GST C-terminal domain-like0.08898Inherited
Thioredoxin-like0.2184Inherited
SH3-domain0.001721Inherited
P-loop containing nucleoside triphosphate hydrolases1Inherited
Periplasmic binding protein-like I0.7585Inherited
FKBP-like0.164Inherited
Spectrin repeat0.06516Inherited
Connexin430.003611Inherited
cAMP-binding domain-like0.6926Inherited
PYP-like sensor domain (PAS domain)0.7Inherited
L27 domain0.003611Inherited
Cystine-knot cytokines0.367Inherited
Hect, E3 ligase catalytic domain0.004887Inherited
DBL homology domain (DH-domain)0.002768Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)0.2226Inherited
Cyclophilin-like0.009481Inherited
PH domain-like0.1065Inherited
L domain-like0.6611Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48403,48403
  • 48403 - Ankyrin repeat
  • 48403 - Ankyrin repeat
  • 0Direct
    50044,50156
  • 50044 - SH3-domain
  • 50156 - PDZ domain-like
  • 0.000000000000001982Direct
    56112,101288
  • 56112 - Protein kinase-like (PK-like)
  • 101288 - L27 domain
  • 0.00000000001384Direct
    46966,51045
  • 46966 - Spectrin repeat
  • 51045 - WW domain
  • 0.000000005452Direct
    51045,47473
  • 51045 - WW domain
  • 47473 - EF-hand
  • 0.000000005452Direct
    101288,101288
  • 101288 - L27 domain
  • 101288 - L27 domain
  • 0.00000003563Direct
    56112,47473
  • 56112 - Protein kinase-like (PK-like)
  • 47473 - EF-hand
  • 0.0000002993Direct
    47473,57850
  • 47473 - EF-hand
  • 57850 - RING/U-box
  • 0.000001193Direct
    81324,81296
  • 81324 - Voltage-gated potassium channels
  • 81296 - E set domains
  • 0.000005338Direct
    101288,50156
  • 101288 - L27 domain
  • 50156 - PDZ domain-like
  • 0.00005278Direct
    50156,50044
  • 50156 - PDZ domain-like
  • 50044 - SH3-domain
  • 0.0001977Direct
    51045,51045
  • 51045 - WW domain
  • 51045 - WW domain
  • 0.0004863Direct
    47473,47473
  • 47473 - EF-hand
  • 47473 - EF-hand
  • 0.0006945Direct
    50044,52540
  • 50044 - SH3-domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0007903Direct
    54236,47031
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 0.005602Inherited
    47031,50729
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.008957Inherited
    50729,56112
  • 50729 - PH domain-like
  • 56112 - Protein kinase-like (PK-like)
  • 0.2828Inherited
    82171,53474
  • 82171 - DPP6 N-terminal domain-like
  • 53474 - alpha/beta-Hydrolases
  • 0.003611Inherited
    52833,47616
  • 52833 - Thioredoxin-like
  • 47616 - GST C-terminal domain-like
  • 0.04606Inherited
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.824Inherited
    52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0.2324Inherited
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.03934Inherited
    51045,56204
  • 51045 - WW domain
  • 56204 - Hect, E3 ligase catalytic domain
  • 0.001793Inherited
    49562,51045
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 51045 - WW domain
  • 0.02088Inherited
    51695,49562
  • 51695 - PLC-like phosphodiesterases
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 0.164Inherited
    50729,47473
  • 50729 - PH domain-like
  • 47473 - EF-hand
  • 0.164Inherited
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.4117Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48403,48403,48403
  • 48403 - Ankyrin repeat
  • 48403 - Ankyrin repeat
  • 48403 - Ankyrin repeat
  • 0.000000000002279Direct
    56112,101288,101288
  • 56112 - Protein kinase-like (PK-like)
  • 101288 - L27 domain
  • 101288 - L27 domain
  • 0.000000002964Direct
    46966,46966,51045
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 51045 - WW domain
  • 0.00000000409Direct
    46966,51045,47473
  • 46966 - Spectrin repeat
  • 51045 - WW domain
  • 47473 - EF-hand
  • 0.000000005452Direct
    51045,47473,47473
  • 51045 - WW domain
  • 47473 - EF-hand
  • 47473 - EF-hand
  • 0.000000005452Direct
    101288,101288,50156
  • 101288 - L27 domain
  • 101288 - L27 domain
  • 50156 - PDZ domain-like
  • 0.00000003563Direct
    47031,50729,56112
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 56112 - Protein kinase-like (PK-like)
  • 0.00000005447Direct
    47473,47473,57850
  • 47473 - EF-hand
  • 47473 - EF-hand
  • 57850 - RING/U-box
  • 0.000001096Direct
    101288,50156,50044
  • 101288 - L27 domain
  • 50156 - PDZ domain-like
  • 50044 - SH3-domain
  • 0.00001336Direct
    50156,50044,52540
  • 50156 - PDZ domain-like
  • 50044 - SH3-domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0001977Direct
    51045,51045,56204
  • 51045 - WW domain
  • 51045 - WW domain
  • 56204 - Hect, E3 ligase catalytic domain
  • 0.0004863Direct
    54236,47031,50729
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.004496Inherited
    52833,52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0.2324Inherited
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.1225Inherited


    Plot distribution on phylogenetic tree for Individual Supra-domains annotated by this GO term
    Plot tree as:   Download Newick format tree:   Browsing in Tree_gateway:
    (show help)