SUPERFAMILY 1.75 HMM library and genome assignments server

Biological Process (BP): regulation of ion transmembrane transport

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Root: GO Hierarchy Containing Three Sub-Ontologies (BP, MF, CC)

Shortest distance to current term (+ for parents, - for children) GO term [GO ID] <#Children> #High-quality
(SF|FA)
#Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   biological_process [GO:0008150] <22>
+ + + + 4:   biological regulation [GO:0065007] <5>(209|239) (743|902|527)
+ + + 3:   regulation of biological process [GO:0050789] <33>(196|222) (697|841|494)
+ + + 3:   regulation of localization [GO:0032879] <9>(49|53) (287|262|159)
+ + 2:   regulation of cellular process [GO:0050794] <74>(167|193) (660|781|448)
+ + 2:   regulation of transport [GO:0051049] <36>(40|44) (236|186|103)
+ 1:   regulation of ion transport [GO:0043269] <13>(15|14) (92|54|29)
+ 1:   regulation of transmembrane transport [GO:0034762] <7>(7|8) (53|28|14)
0:   regulation of ion transmembrane transport [GO:0034765] <16>(5|6) (45|27|14)
- 1:   regulation of ion transmembrane transporter activity [GO:0032412] <16>(4|4) (31|22|11)
- 1:   negative regulation of ion transmembrane transport [GO:0034766] <13>(2|2) (8|2|1)
- 1:   positive regulation of ion transmembrane transport [GO:0034767] <11>(2|3) (14|12|5)
- 1:   regulation of potassium ion transmembrane transport [GO:1901379] <5>(2|2) (4|1|0)
- 1:   regulation of sodium ion transmembrane transport [GO:1902305] <5>(2|2) (5|4|5)
- 1:   regulation of calcium ion import [GO:0090279] <3>(0|1) (4|6|4)
- 1:   regulation of calcium ion transmembrane transport [GO:1903169] <3>(1|1) (10|4|1)
- 1:   regulation of membrane repolarization [GO:0060306] <3>(0|0) (4|0|0)
- 1:   regulation of (R)-carnitine transmembrane transport [GO:1902272] <2>(0|0) (0|0|0)
- 1:   regulation of copper ion transmembrane transport [GO:1902311] <2>(0|0) (0|0|0)
- 1:   regulation of gluconate transmembrane transport [GO:0035430] <2>(0|0) (0|0|0)
- 1:   regulation of iron ion transmembrane transport [GO:0034759] <2>(0|0) (0|0|0)
- 1:   regulation of leucine import into cell [GO:1903128] <2>(0|0) (0|0|0)
- 1:   regulation of phosphate transmembrane transport [GO:2000185] <2>(1|1) (1|0|0)
- 1:   regulation of plasma membrane long-chain fatty acid transport [GO:0010746] <2>(0|0) (1|0|0)
- 1:   regulation of zinc ion transmembrane transport [GO:0071580] <2>(0|0) (2|0|0)


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Superfamily

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
EF-hand0.000044150.00002132Direct
PhoU-like00Direct
WD40 repeat-like0.25381Inherited
NAD(P)-linked oxidoreductase0.013010.002878Inherited
4-helical cytokines0.016910.00000000001429Inherited


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Family

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
Calmodulin-like0.00065430.00005989Direct
PhoU-like00Direct
WD40-repeat0.28430.8009Inherited
Aldo-keto reductases (NADP)0.021760.004573Inherited
Nucleotide and nucleoside kinases0.028080.0005672Inherited
Long-chain cytokines0.0043820.000000000000279Inherited


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Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
PhoU-like0Direct
DEATH domain0.00000000000000962Direct
4-helical cytokines0.000000000008412Direct
Ankyrin repeat0.0000000001406Direct
Prion-like0.00000002061Direct
Bactericidal permeability-increasing protein, BPI0.0000003029Direct
AF0104/ALDC/Ptd012-like0.0000003603Direct
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain0.000001356Direct
FAT domain of focal adhesion kinase0.000001696Direct
SAM/Pointed domain0.000001723Direct
PDZ domain-like0.000002077Direct
Ras GEF0.000005117Direct
EF-hand0.00001431Direct
Protein kinase-like (PK-like)0.3321Inherited
Immunoglobulin0.9074Inherited
alpha/beta-Hydrolases0.03869Inherited
SH3-domain0.01378Inherited
Family A G protein-coupled receptor-like1Inherited
Second domain of FERM0.005971Inherited
DPP6 N-terminal domain-like0.004723Inherited
HD-domain/PDEase-like0.02317Inherited
FKBP-like0.1888Inherited
Thioredoxin-like0.3767Inherited
GST C-terminal domain-like0.1267Inherited
P-loop containing nucleoside triphosphate hydrolases1Inherited
Cystine-knot cytokines0.4607Inherited
L27 domain0.004723Inherited
Periplasmic binding protein-like I0.8284Inherited
Ubiquitin-like0.03563Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)0.04853Inherited
Connexin430.004723Inherited
cAMP-binding domain-like0.5431Inherited
PYP-like sensor domain (PAS domain)0.7675Inherited
Flavoproteins0.5356Inherited
WD40 repeat-like0.9088Inherited
Hect, E3 ligase catalytic domain0.007147Inherited
Calponin-homology domain, CH-domain0.09556Inherited
Spermadhesin, CUB domain0.001943Inherited
DBL homology domain (DH-domain)0.005083Inherited
NAD(P)-linked oxidoreductase0.002086Inherited
Spectrin repeat0.08566Inherited
Cyclophilin-like0.01186Inherited
WW domain0.001251Inherited
PH domain-like0.1199Inherited
L domain-like0.7776Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48403,48403
  • 48403 - Ankyrin repeat
  • 48403 - Ankyrin repeat
  • 0Direct
    50044,50156
  • 50044 - SH3-domain
  • 50156 - PDZ domain-like
  • 0.000000000000004908Direct
    56112,101288
  • 56112 - Protein kinase-like (PK-like)
  • 101288 - L27 domain
  • 0.00000000002754Direct
    51045,47473
  • 51045 - WW domain
  • 47473 - EF-hand
  • 0.00000001077Direct
    46966,51045
  • 46966 - Spectrin repeat
  • 51045 - WW domain
  • 0.00000001077Direct
    101288,101288
  • 101288 - L27 domain
  • 101288 - L27 domain
  • 0.00000006175Direct
    56112,47473
  • 56112 - Protein kinase-like (PK-like)
  • 47473 - EF-hand
  • 0.000000586Direct
    47473,57850
  • 47473 - EF-hand
  • 57850 - RING/U-box
  • 0.000002321Direct
    81324,81296
  • 81324 - Voltage-gated potassium channels
  • 81296 - E set domains
  • 0.00001031Direct
    101288,50156
  • 101288 - L27 domain
  • 50156 - PDZ domain-like
  • 0.00008395Direct
    50156,50044
  • 50156 - PDZ domain-like
  • 50044 - SH3-domain
  • 0.0002957Direct
    51045,51045
  • 51045 - WW domain
  • 51045 - WW domain
  • 0.0007426Direct
    50729,56112
  • 50729 - PH domain-like
  • 56112 - Protein kinase-like (PK-like)
  • 0.3297Inherited
    82171,53474
  • 82171 - DPP6 N-terminal domain-like
  • 53474 - alpha/beta-Hydrolases
  • 0.004723Inherited
    52833,47616
  • 52833 - Thioredoxin-like
  • 47616 - GST C-terminal domain-like
  • 0.06777Inherited
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.8702Inherited
    50044,52540
  • 50044 - SH3-domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.001232Inherited
    51045,56204
  • 51045 - WW domain
  • 56204 - Hect, E3 ligase catalytic domain
  • 0.002678Inherited
    49562,51045
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 51045 - WW domain
  • 0.02798Inherited
    47473,47473
  • 47473 - EF-hand
  • 47473 - EF-hand
  • 0.001092Inherited
    54236,47031
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 0.001486Inherited
    47031,50729
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.002648Inherited
    52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0.5717Inherited
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.05279Inherited
    50729,47473
  • 50729 - PH domain-like
  • 47473 - EF-hand
  • 0.1888Inherited
    51695,49562
  • 51695 - PLC-like phosphodiesterases
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 0.1888Inherited
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.475Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48403,48403,48403
  • 48403 - Ankyrin repeat
  • 48403 - Ankyrin repeat
  • 48403 - Ankyrin repeat
  • 0.000000000008101Direct
    56112,101288,101288
  • 56112 - Protein kinase-like (PK-like)
  • 101288 - L27 domain
  • 101288 - L27 domain
  • 0.000000005137Direct
    46966,46966,51045
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 51045 - WW domain
  • 0.000000008094Direct
    46966,51045,47473
  • 46966 - Spectrin repeat
  • 51045 - WW domain
  • 47473 - EF-hand
  • 0.00000001077Direct
    51045,47473,47473
  • 51045 - WW domain
  • 47473 - EF-hand
  • 47473 - EF-hand
  • 0.00000001077Direct
    101288,101288,50156
  • 101288 - L27 domain
  • 101288 - L27 domain
  • 50156 - PDZ domain-like
  • 0.00000006175Direct
    47031,50729,56112
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 56112 - Protein kinase-like (PK-like)
  • 0.00000009442Direct
    47473,47473,57850
  • 47473 - EF-hand
  • 47473 - EF-hand
  • 57850 - RING/U-box
  • 0.000002132Direct
    101288,50156,50044
  • 101288 - L27 domain
  • 50156 - PDZ domain-like
  • 50044 - SH3-domain
  • 0.00002084Direct
    50156,50044,52540
  • 50156 - PDZ domain-like
  • 50044 - SH3-domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0002957Direct
    51045,51045,56204
  • 51045 - WW domain
  • 51045 - WW domain
  • 56204 - Hect, E3 ligase catalytic domain
  • 0.0007426Direct
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.1512Inherited
    54236,47031,50729
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.001134Inherited
    52833,52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0.5717Inherited


    Plot distribution on phylogenetic tree for Individual Supra-domains annotated by this GO term
    Plot tree as:   Download Newick format tree:   Browsing in Tree_gateway:
    (show help)