SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Biological Process (BP): cellular response to decreased oxygen levels

(show info)

Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Root: GO Hierarchy Containing Three Sub-Ontologies (BP, MF, CC)

Shortest distance to current term (+ for parents, - for children) GO term [GO ID] <#Children> #High-quality
(SF|FA)
#Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   biological_process [GO:0008150] <24>
+ + + + 4:   cellular process [GO:0009987] <21>(372|486) (1162|1371|744)
+ + + + 4:   response to stimulus [GO:0050896] <16>(133|153) (688|755|432)
+ + + 3:   cellular response to stimulus [GO:0051716] <12>(88|98) (521|550|312)
+ + + 3:   response to abiotic stimulus [GO:0009628] <15>(35|43) (277|198|78)
+ + + 3:   response to chemical [GO:0042221] <38>(71|82) (484|441|237)
+ + 2:   cellular response to chemical stimulus [GO:0070887] <34>(47|54) (352|295|150)
+ + 2:   response to oxygen levels [GO:0070482] <4>(7|8) (66|49|27)
+ 1:   cellular response to oxygen levels [GO:0071453] <2>(3|3) (32|24|13)
+ 1:   response to decreased oxygen levels [GO:0036293] <4>(7|8) (53|48|27)
0:   cellular response to decreased oxygen levels [GO:0036294] <4>(3|3) (26|23|13)
- 1:   cellular response to hypoxia [GO:0071456] <4>(3|3) (22|20|13)
- 1:   positive regulation of SREBP signaling pathway in response to decreased oxygen levels [GO:0038176] <1>(0|0) (0|0|0)
- 1:   cellular response to anoxia [GO:0071454](0|0) (0|0|0)
- 1:   cellular response to oxygen-glucose deprivation [GO:0090650](0|0) (0|0|0)


Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
Aquaporin-like0.000056290.0001002Direct
Cytochrome P45000.00000008055Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.000000000012480.000000007416Direct


Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
Aquaporin-like0.000070280.00007547Direct
Cytochrome P45000.00000005464Direct
Proteasome subunits0.0000000000072320.00000000007319Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this GO term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
DNA-binding protein LAG-1 (CSL)0.00000000007233Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.000000004469Direct
alpha-ketoacid dehydrogenase kinase, N-terminal domain0.000000004673Direct
RNA-binding domain, RBD0.00000003909Direct
Cytochrome P4500.00000004996Direct
Heparin-binding domain from vascular endothelial growth factor0.00000004996Direct
FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)0.000001339Direct
CalX-like0.000003478Direct
Notch domain0.000005255Direct
Polo-box domain0.00001536Direct
p53 tetramerization domain0.00003502Direct
Aquaporin-like0.00006847Direct
Bcl-2 inhibitors of programmed cell death0.0002934Direct
Heme-dependent peroxidases0.0003204Direct
DHS-like NAD/FAD-binding domain0.0004617Direct
BAR/IMD domain-like0.0006361Direct
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.1156Inherited
Rap/Ran-GAP0.01416Inherited
Cystine-knot cytokines1Inherited
Ankyrin repeat0.001109Inherited
p53-like transcription factors0.01852Inherited
EGF/Laminin0.09642Inherited
Growth factor receptor domain0.7019Inherited
HLH, helix-loop-helix DNA-binding domain0.3795Inherited
PYP-like sensor domain (PAS domain)0.8239Inherited
E set domains0.008524Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
50156,103657
  • 50156 - PDZ domain-like
  • 103657 - BAR/IMD domain-like
  • 0.00000000000000826Direct
    110217,81296
  • 110217 - DNA-binding protein LAG-1 (CSL)
  • 81296 - E set domains
  • 0.00000000002609Direct
    49417,110217
  • 49417 - p53-like transcription factors
  • 110217 - DNA-binding protein LAG-1 (CSL)
  • 0.00000000007233Direct
    69012,55874
  • 69012 - alpha-ketoacid dehydrogenase kinase, N-terminal domain
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 0.000000002128Direct
    57501,57593
  • 57501 - Cystine-knot cytokines
  • 57593 - Heparin-binding domain from vascular endothelial growth factor
  • 0.00000004996Direct
    56112,82615
  • 56112 - Protein kinase-like (PK-like)
  • 82615 - Polo-box domain
  • 0.000000332Direct
    141072,141072
  • 141072 - CalX-like
  • 141072 - CalX-like
  • 0.000001037Direct
    47212,56112
  • 47212 - FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
  • 56112 - Protein kinase-like (PK-like)
  • 0.000001339Direct
    90193,90193
  • 90193 - Notch domain
  • 90193 - Notch domain
  • 0.000002462Direct
    57196,90193
  • 57196 - EGF/Laminin
  • 90193 - Notch domain
  • 0.000002827Direct
    82615,82615
  • 82615 - Polo-box domain
  • 82615 - Polo-box domain
  • 0.000003229Direct
    46785,46785
  • 46785 - "Winged helix" DNA-binding domain
  • 46785 - "Winged helix" DNA-binding domain
  • 0.0000204Direct
    49417,47719
  • 49417 - p53-like transcription factors
  • 47719 - p53 tetramerization domain
  • 0.00003502Direct
    90229,90229
  • 90229 - CCCH zinc finger
  • 90229 - CCCH zinc finger
  • 0.00007604Direct
    54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0.0008888Direct
    49265,49265
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0.03088Inherited
    57440,50494
  • 57440 - Kringle-like
  • 50494 - Trypsin-like serine proteases
  • 0.1066Inherited
    47459,55785
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0.6864Inherited
    55785,55785
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0.7055Inherited
    57184,57184
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0.002705Inherited
    57184,57196
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 0.03417Inherited
    57196,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.03417Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.1066Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    46785,46785,46785
  • 46785 - "Winged helix" DNA-binding domain
  • 46785 - "Winged helix" DNA-binding domain
  • 46785 - "Winged helix" DNA-binding domain
  • 0.000000000003778Direct
    49417,110217,81296
  • 49417 - p53-like transcription factors
  • 110217 - DNA-binding protein LAG-1 (CSL)
  • 81296 - E set domains
  • 0.00000000002609Direct
    56112,82615,82615
  • 56112 - Protein kinase-like (PK-like)
  • 82615 - Polo-box domain
  • 82615 - Polo-box domain
  • 0.000000332Direct
    57196,57196,90193
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 90193 - Notch domain
  • 0.000001339Direct
    90193,90193,90193
  • 90193 - Notch domain
  • 90193 - Notch domain
  • 90193 - Notch domain
  • 0.000001339Direct
    57196,90193,90193
  • 57196 - EGF/Laminin
  • 90193 - Notch domain
  • 90193 - Notch domain
  • 0.000001839Direct
    57184,57184,57196
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 0.0001138Direct
    57196,57184,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0.000226Direct
    57196,57184,57196
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 0.03417Inherited
    57184,57196,57196
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.03417Inherited
    47459,55785,55785
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0.5273Inherited
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.03417Inherited
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.03417Inherited


    Plot distribution on phylogenetic tree for Individual Supra-domains annotated by this GO term
    Plot tree as:   Download Newick format tree:   Browsing in Tree_gateway:
    (show help)