SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Biological Process (BP): synaptic vesicle transport

(show info)

Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Root: GO Hierarchy Containing Three Sub-Ontologies (BP, MF, CC)

Shortest distance to current term (+ for parents, - for children) GO term [GO ID] <#Children> #High-quality
(SF|FA)
#Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   biological_process [GO:0008150] <24>
+ + + + 4:   establishment of localization [GO:0051234] <6>(78|88) (409|348|184)
+ + + + 4:   localization [GO:0051179] <10>(91|101) (503|489|298)
+ + + + 4:   single-organism process [GO:0044699] <23>(290|375) (996|1199|711)
+ + + 3:   cellular localization [GO:0051641] <12>(36|37) (304|235|116)
+ + + 3:   establishment of localization in cell [GO:0051649] <23>(30|31) (237|169|72)
+ + + 3:   establishment of organelle localization [GO:0051656] <13>(8|6) (83|51|18)
+ + + 3:   organelle localization [GO:0051640] <18>(11|9) (101|59|20)
+ + + 3:   single-organism localization [GO:1902578] <6>(57|66) (333|243|124)
+ + + 3:   transport [GO:0006810] <14>(76|87) (402|340|182)
+ + 2:   establishment of vesicle localization [GO:0051650] <9>(1|2) (48|25|9)
+ + 2:   intracellular transport [GO:0046907] <21>(27|28) (209|144|62)
+ + 2:   single-organism cellular localization [GO:1902580] <23>(13|14) (137|94|48)
+ + 2:   single-organism transport [GO:0044765] <63>(53|60) (319|232|118)
+ + 2:   vesicle localization [GO:0051648] <6>(2|2) (49|25|9)
+ + 2:   vesicle-mediated transport [GO:0016192] <28>(22|21) (164|165|99)
+ 1:   establishment of synaptic vesicle localization [GO:0097480] <1>(0|0) (28|15|5)
+ 1:   single-organism intracellular transport [GO:1902582] <38>(10|11) (124|84|40)
+ 1:   synaptic vesicle localization [GO:0097479] <3>(0|0) (28|15|5)
+ 1:   vesicle-mediated transport in synapse [GO:0099003] <4>(0|0) (27|15|5)
0:   synaptic vesicle transport [GO:0048489] <4>(0|0) (27|15|5)
- 1:   synaptic vesicle exocytosis [GO:0016079] <7>(0|0) (11|3|0)
- 1:   synaptic vesicle budding [GO:0070142] <2>(0|0) (2|0|0)
- 1:   synaptic vesicle cytoskeletal transport [GO:0099514] <2>(0|0) (5|2|1)
- 1:   synaptic vesicle recycling [GO:0036465] <2>(0|0) (12|10|4)


Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
C2 domain (Calcium/lipid-binding domain, CaLB)0Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0Direct
t-snare proteins0.000000000000003737Direct
PDZ domain-like0.00000000002626Direct
Cysteine-rich domain0.00000000005978Direct
SNARE fusion complex0.0000000000673Direct
FYVE/PHD zinc finger0.00000000009061Direct
BAR/IMD domain-like0.0000000002366Direct
SNARE-like0.00000002017Direct
SH3-domain0.0000002206Direct
ENTH/VHS domain0.0000002914Direct
P-domain of calnexin/calreticulin0.000007414Direct
Sec1/munc18-like (SM) proteins0.000008221Direct
Cullin repeat-like0.00005407Direct
Tropomyosin0.0001337Direct
SAM/Pointed domain0.008631Inherited
ARM repeat1Inherited
Concanavalin A-like lectins/glucanases0.01543Inherited
EF-hand0.004145Inherited
Subdomain of clathrin and coatomer appendage domain0.00562Inherited
DNase I-like0.02584Inherited
GAT-like domain0.02983Inherited
(Phosphotyrosine protein) phosphatases II0.169Inherited
P-loop containing nucleoside triphosphate hydrolases1Inherited
WD40 repeat-like0.9656Inherited
PH domain-like0.03071Inherited
alpha/beta-Hydrolases0.8122Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47473,47473
  • 47473 - EF-hand
  • 47473 - EF-hand
  • 0Direct
    49562,49562
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 0Direct
    47473,57997
  • 47473 - EF-hand
  • 57997 - Tropomyosin
  • 0Direct
    56219,54928
  • 56219 - DNase I-like
  • 54928 - RNA-binding domain, RBD
  • 0.000000000000005554Direct
    103657,50044
  • 103657 - BAR/IMD domain-like
  • 50044 - SH3-domain
  • 0.00000000000007234Direct
    64356,49447
  • 64356 - SNARE-like
  • 49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
  • 0.0000000000005933Direct
    50044,50044
  • 50044 - SH3-domain
  • 50044 - SH3-domain
  • 0.000000000005776Direct
    50729,74788
  • 50729 - PH domain-like
  • 74788 - Cullin repeat-like
  • 0.0000000171Direct
    47769,47769
  • 47769 - SAM/Pointed domain
  • 47769 - SAM/Pointed domain
  • 0.00000004352Direct
    49899,49899
  • 49899 - Concanavalin A-like lectins/glucanases
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.000005621Direct
    49899,63887
  • 49899 - Concanavalin A-like lectins/glucanases
  • 63887 - P-domain of calnexin/calreticulin
  • 0.000007414Direct
    52799,49562
  • 52799 - (Phosphotyrosine protein) phosphatases II
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 0.00005306Direct
    49348,55711
  • 49348 - Clathrin adaptor appendage domain
  • 55711 - Subdomain of clathrin and coatomer appendage domain
  • 0.00562Inherited
    48464,89009
  • 48464 - ENTH/VHS domain
  • 89009 - GAT-like domain
  • 0.00562Inherited
    50156,50156
  • 50156 - PDZ domain-like
  • 50156 - PDZ domain-like
  • 0.001038Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    47473,47473,47473
  • 47473 - EF-hand
  • 47473 - EF-hand
  • 47473 - EF-hand
  • 0Direct
    47473,47473,57997
  • 47473 - EF-hand
  • 47473 - EF-hand
  • 57997 - Tropomyosin
  • 0Direct
    50044,50044,50044
  • 50044 - SH3-domain
  • 50044 - SH3-domain
  • 50044 - SH3-domain
  • 0.00000008959Direct
    47769,47769,47769
  • 47769 - SAM/Pointed domain
  • 47769 - SAM/Pointed domain
  • 47769 - SAM/Pointed domain
  • 0.00000008959Direct
    49899,49899,63887
  • 49899 - Concanavalin A-like lectins/glucanases
  • 49899 - Concanavalin A-like lectins/glucanases
  • 63887 - P-domain of calnexin/calreticulin
  • 0.0000002756Direct


    Plot distribution on phylogenetic tree for Individual Supra-domains annotated by this GO term
    Plot tree as:   Download Newick format tree:   Browsing in Tree_gateway:
    (show help)