SUPERFAMILY 1.75 HMM library and genome assignments server

Biological Process (BP): SMAD protein signal transduction

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Root: GO Hierarchy Containing Three Sub-Ontologies (BP, MF, CC)

Shortest distance to current term (+ for parents, - for children) GO term [GO ID] <#Children> #High-quality
(SF|FA)
#Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   biological regulation [GO:0065007] <3>(208|234) (739|901|526)
+ + + + 4:   biological_process [GO:0008150] <20>
+ + + + 4:   cellular process [GO:0009987] <5>(385|515) (1146|1338|724)
+ + + 3:   cell surface receptor signaling pathway [GO:0007166] <27>(33|36) (223|225|140)
+ + + 3:   regulation of biological process [GO:0050789] <31>(196|218) (691|840|491)
+ + + 3:   response to stimulus [GO:0050896] <17>(155|175) (670|748|446)
+ + + 3:   signaling [GO:0023052] <2>(76|77) (390|423|254)
+ + + 3:   single-organism cellular process [GO:0044763] <70>(212|237) (815|951|551)
+ + + 3:   single-organism process [GO:0044699] <27>(244|273) (870|1053|621)
+ + 2:   cell communication [GO:0007154] <16>(76|81) (411|439|261)
+ + 2:   cellular response to stimulus [GO:0051716] <8>(96|110) (508|536|308)
+ + 2:   enzyme linked receptor protein signaling pathway [GO:0007167] <5>(11|11) (125|130|74)
+ + 2:   regulation of cellular process [GO:0050794] <75>(163|184) (650|775|444)
+ + 2:   single organism signaling [GO:0044700] <7>(71|75) (390|418|251)
+ 1:   signal transduction [GO:0007165] <32>(53|57) (329|351|208)
+ 1:   transmembrane receptor protein serine/threonine kinase signaling pathway [GO:0007178] <12>(1|2) (47|35|19)
0:   SMAD protein signal transduction [GO:0060395](0|1) (15|11|4)


Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
Transferrin1.151e-151.515e-13Direct


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Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Cystine-knot cytokines0Direct
beta-N-acetylhexosaminidase-like domain0Direct
WW domain2.21e-13Direct
Dimerization cofactor of HNF-1 alpha1.856e-11Direct
Intermediate filament protein, coiled coil region3.008e-11Direct
Serum albumin-like8.087e-10Direct
SMAD MH1 domain8.305e-10Direct
SMAD/FHA domain5.949e-07Direct
PDZ domain-like6.623e-07Direct
(Trans)glycosidases9.485e-07Direct
Leukotriene A4 hydrolase N-terminal domain1.103e-06Direct
SAND domain-like1.848e-05Direct
Glucocorticoid receptor-like (DNA-binding domain)2.129e-05Direct
Putative DNA-binding domain4.65e-05Direct
lambda repressor-like DNA-binding domains0.0008305Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
51045,50156
  • 51045 - WW domain
  • 50156 - PDZ domain-like
  • 0Direct
    55545,51445
  • 55545 - beta-N-acetylhexosaminidase-like domain
  • 51445 - (Trans)glycosidases
  • 0Direct
    52540,51045
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 51045 - WW domain
  • 0Direct
    51045,51045
  • 51045 - WW domain
  • 51045 - WW domain
  • 1.016e-15Direct
    50156,50156
  • 50156 - PDZ domain-like
  • 50156 - PDZ domain-like
  • 2.822e-13Direct
    48552,48552
  • 48552 - Serum albumin-like
  • 48552 - Serum albumin-like
  • 8.087e-10Direct
    50156,52540
  • 50156 - PDZ domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 2.634e-07Direct
    63737,55486
  • 63737 - Leukotriene A4 hydrolase N-terminal domain
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 9.585e-07Direct
    46955,63763
  • 46955 - Putative DNA-binding domain
  • 63763 - SAND domain-like
  • 8.425e-06Direct
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 1.848e-05Direct
    57716,48508
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 48508 - Nuclear receptor ligand-binding domain
  • 0.0005574Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    51045,51045,50156
  • 51045 - WW domain
  • 51045 - WW domain
  • 50156 - PDZ domain-like
  • 0Direct
    52540,51045,51045
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 51045 - WW domain
  • 51045 - WW domain
  • 0Direct
    48552,48552,48552
  • 48552 - Serum albumin-like
  • 48552 - Serum albumin-like
  • 48552 - Serum albumin-like
  • 1.88e-10Direct
    50156,52540,51045
  • 50156 - PDZ domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 51045 - WW domain
  • 2.634e-07Direct


    Plot distribution on phylogenetic tree for Individual Supra-domains annotated by this GO term
    Plot tree as:   Download Newick format tree:   Browsing in Tree_gateway:
    (show help)