SUPERFAMILY 1.75 HMM library and genome assignments server

Biological Process (BP): SMAD protein signal transduction

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Root: GO Hierarchy Containing Three Sub-Ontologies (BP, MF, CC)

Shortest distance to current term (+ for parents, - for children) GO term [GO ID] <#Children> #High-quality
(SF|FA)
#Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   biological regulation [GO:0065007] <3>(206|235) (732|896|528)
+ + + + 4:   biological_process [GO:0008150] <20>
+ + + + 4:   cellular process [GO:0009987] <5>(380|506) (1134|1324|715)
+ + + 3:   cell surface receptor signaling pathway [GO:0007166] <27>(33|35) (220|224|142)
+ + + 3:   regulation of biological process [GO:0050789] <31>(194|219) (682|832|491)
+ + + 3:   response to stimulus [GO:0050896] <17>(156|175) (663|732|439)
+ + + 3:   signaling [GO:0023052] <2>(76|76) (389|423|256)
+ + + 3:   single-organism cellular process [GO:0044763] <70>(212|238) (798|933|542)
+ + + 3:   single-organism process [GO:0044699] <27>(243|275) (858|1037|610)
+ + 2:   cell communication [GO:0007154] <16>(77|81) (409|436|262)
+ + 2:   cellular response to stimulus [GO:0051716] <8>(98|109) (499|521|301)
+ + 2:   enzyme linked receptor protein signaling pathway [GO:0007167] <5>(12|11) (121|128|74)
+ + 2:   regulation of cellular process [GO:0050794] <75>(161|182) (641|764|443)
+ + 2:   single organism signaling [GO:0044700] <7>(71|75) (389|417|253)
+ 1:   signal transduction [GO:0007165] <32>(54|57) (325|347|208)
+ 1:   transmembrane receptor protein serine/threonine kinase signaling pathway [GO:0007178] <12>(2|2) (41|32|18)
0:   SMAD protein signal transduction [GO:0060395](1|1) (10|10|4)


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Superfamily

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
Periplasmic binding protein-like II0.00000000070830.0001464Direct


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Family

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
Transferrin00.000000000000007467Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this GO term
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Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Cystine-knot cytokines0Direct
WW domain0.000000000000001013Direct
Dimerization cofactor of HNF-1 alpha0.000000000002484Direct
Serum albumin-like0.00000000009688Direct
PDZ domain-like0.000000003952Direct
Glucocorticoid receptor-like (DNA-binding domain)0.000000633Direct
SAND domain-like0.000003549Direct
Putative DNA-binding domain0.000009026Direct
Periplasmic binding protein-like II0.0001004Direct
lambda repressor-like DNA-binding domains0.0001534Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
51045,50156
  • 51045 - WW domain
  • 50156 - PDZ domain-like
  • 0Direct
    52540,51045
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 51045 - WW domain
  • 0Direct
    51045,51045
  • 51045 - WW domain
  • 51045 - WW domain
  • 0Direct
    50156,50156
  • 50156 - PDZ domain-like
  • 50156 - PDZ domain-like
  • 0.000000000000001013Direct
    48552,48552
  • 48552 - Serum albumin-like
  • 48552 - Serum albumin-like
  • 0.00000000009688Direct
    50156,52540
  • 50156 - PDZ domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00000004897Direct
    46955,63763
  • 46955 - Putative DNA-binding domain
  • 63763 - SAND domain-like
  • 0.000001606Direct
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.000003549Direct
    57716,48508
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 48508 - Nuclear receptor ligand-binding domain
  • 0.0001555Direct
    57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.0001972Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    51045,51045,50156
  • 51045 - WW domain
  • 51045 - WW domain
  • 50156 - PDZ domain-like
  • 0Direct
    52540,51045,51045
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 51045 - WW domain
  • 51045 - WW domain
  • 0Direct
    48552,48552,48552
  • 48552 - Serum albumin-like
  • 48552 - Serum albumin-like
  • 48552 - Serum albumin-like
  • 0.00000000001908Direct
    50156,52540,51045
  • 50156 - PDZ domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 51045 - WW domain
  • 0.00000004897Direct


    Plot distribution on phylogenetic tree for Individual Supra-domains annotated by this GO term
    Plot tree as:   Download Newick format tree:   Browsing in Tree_gateway:
    (show help)