SUPERFAMILY 1.75 HMM library and genome assignments server

Biological Process (BP): SMAD protein signal transduction

(show info)

Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Root: GO Hierarchy Containing Three Sub-Ontologies (BP, MF, CC)

Shortest distance to current term (+ for parents, - for children) GO term [GO ID] <#Children> #High-quality
(SF|FA)
#Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   biological regulation [GO:0065007] <5>(209|239) (743|902|527)
+ + + + 4:   biological_process [GO:0008150] <22>
+ + + 3:   cell surface receptor signaling pathway [GO:0007166] <29>(33|37) (223|225|140)
+ + + 3:   cellular process [GO:0009987] <10>(383|504) (1133|1327|713)
+ + + 3:   regulation of biological process [GO:0050789] <33>(196|222) (697|841|494)
+ + + 3:   response to stimulus [GO:0050896] <17>(156|176) (670|753|448)
+ + + 3:   signaling [GO:0023052] <3>(75|75) (384|418|252)
+ + + 3:   single-organism cellular process [GO:0044763] <224>(292|358) (958|1102|618)
+ + + 3:   single-organism process [GO:0044699] <29>(333|421) (1020|1225|712)
+ + 2:   cell communication [GO:0007154] <16>(75|79) (403|433|259)
+ + 2:   cellular response to stimulus [GO:0051716] <10>(98|109) (506|538|309)
+ + 2:   enzyme linked receptor protein signaling pathway [GO:0007167] <5>(11|11) (125|130|74)
+ + 2:   regulation of cellular process [GO:0050794] <74>(167|193) (660|781|448)
+ + 2:   single organism signaling [GO:0044700] <7>(73|74) (384|412|249)
+ 1:   signal transduction [GO:0007165] <33>(52|56) (327|351|208)
+ 1:   transmembrane receptor protein serine/threonine kinase signaling pathway [GO:0007178] <12>(1|2) (47|36|19)
0:   SMAD protein signal transduction [GO:0060395](0|1) (15|11|4)


Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
Transferrin0.0000000000000011440.0000000000001483Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this GO term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
beta-N-acetylhexosaminidase-like domain0Direct
Cystine-knot cytokines0Direct
WW domain0.0000000000001998Direct
Dimerization cofactor of HNF-1 alpha0.00000000001836Direct
Intermediate filament protein, coiled coil region0.0000000000294Direct
SMAD MH1 domain0.0000000007684Direct
Serum albumin-like0.0000000007832Direct
SMAD/FHA domain0.0000005562Direct
PDZ domain-like0.0000007223Direct
(Trans)glycosidases0.0000009759Direct
Leukotriene A4 hydrolase N-terminal domain0.000001096Direct
SAND domain-like0.00001803Direct
Glucocorticoid receptor-like (DNA-binding domain)0.00002026Direct
Putative DNA-binding domain0.00004531Direct
lambda repressor-like DNA-binding domains0.0008175Direct

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55545,51445
  • 55545 - beta-N-acetylhexosaminidase-like domain
  • 51445 - (Trans)glycosidases
  • 0Direct
    52540,51045
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 51045 - WW domain
  • 0Direct
    51045,51045
  • 51045 - WW domain
  • 51045 - WW domain
  • 0Direct
    51045,50156
  • 51045 - WW domain
  • 50156 - PDZ domain-like
  • 0Direct
    50156,50156
  • 50156 - PDZ domain-like
  • 50156 - PDZ domain-like
  • 0.0000000000002548Direct
    48552,48552
  • 48552 - Serum albumin-like
  • 48552 - Serum albumin-like
  • 0.0000000007832Direct
    50156,52540
  • 50156 - PDZ domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0000002571Direct
    63737,55486
  • 63737 - Leukotriene A4 hydrolase N-terminal domain
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 0.000000952Direct
    46955,63763
  • 46955 - Putative DNA-binding domain
  • 63763 - SAND domain-like
  • 0.000008214Direct
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.00001803Direct
    57716,48508
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 48508 - Nuclear receptor ligand-binding domain
  • 0.0005529Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    52540,51045,51045
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 51045 - WW domain
  • 51045 - WW domain
  • 0Direct
    51045,51045,50156
  • 51045 - WW domain
  • 51045 - WW domain
  • 50156 - PDZ domain-like
  • 0Direct
    48552,48552,48552
  • 48552 - Serum albumin-like
  • 48552 - Serum albumin-like
  • 48552 - Serum albumin-like
  • 0.0000000001863Direct
    50156,52540,51045
  • 50156 - PDZ domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 51045 - WW domain
  • 0.0000002571Direct


    Plot distribution on phylogenetic tree for Individual Supra-domains annotated by this GO term
    Plot tree as:   Download Newick format tree:   Browsing in Tree_gateway:
    (show help)