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Biological Process (BP): biological regulation

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Root: GO Hierarchy Containing Three Sub-Ontologies (BP, MF, CC)

Shortest distance to current term (+ for parents, - for children) GO term [GO ID] <#Children> #High-quality
(SF|FA)
#Supra-domain
(Single|Duplex|Triple)
+ 1:   biological_process [GO:0008150] <24>
0:   biological regulation [GO:0065007] <5>(165|190) (757|933|542)
- 1:   regulation of biological quality [GO:0065008] <46>(62|65) (453|402|258)
- 1:   regulation of biological process [GO:0050789] <34>(155|176) (709|883|505)
- 1:   regulation of molecular function [GO:0065009] <12>(42|40) (274|255|136)
- 1:   negative regulation of growth factor dependent skeletal muscle satellite cell proliferation [GO:1902727](0|0) (0|0|0)
- 1:   positive regulation of growth factor dependent skeletal muscle satellite cell proliferation [GO:1902728](0|0) (0|0|0)


Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
"Winged helix" DNA-binding domain00Direct
14-3-3 protein0.0000000000001280.0000034Direct
4-helical cytokines00Direct
ARM repeat0.00030960.00000006075Direct
Bcl-2 inhibitors of programmed cell death00Direct
Caspase-like0.000093520.00008367Direct
CheY-like0.00029250Direct
Core binding factor beta, CBF0.00000029610.000007287Direct
Cystine-knot cytokines00Direct
Cytokine00Direct
DEATH domain0.00030240Direct
E set domains0.0000015330.000000000031Direct
EF-hand0.0000000000044390.0000000002432Direct
Family A G protein-coupled receptor-like0.0000000004410Direct
HLH, helix-loop-helix DNA-binding domain0.0000000001880Direct
Homeodomain-like0.00000095910Direct
Immunoglobulin00Direct
Inhibitor of apoptosis (IAP) repeat00Direct
Insulin-like0.00000046460.000000000009485Direct
Interleukin 8-like chemokines00Direct
Metallothionein00.00000000005858Direct
Nuclear receptor ligand-binding domain0.00015170Direct
PhoU-like0.000000000092740.00002678Direct
Protein kinase-like (PK-like)00Direct
Putative DNA-binding domain0.0000025840.00000000006341Direct
Regulator of G-protein signaling, RGS0.0000000042790Direct
Roadblock/LC7 domain0.0000000000033720.0001669Direct
Serpins00.000000000948Direct
SH2 domain0.00074070Direct
Spermadhesin, CUB domain00.000000000001894Direct
Subunits of heterodimeric actin filament capping protein Capz0.0000000093920.00006244Direct
The spindle assembly checkpoint protein mad20.00000000060850.000004159Direct
TIMP-like0.00000067690Direct
Toll/Interleukin receptor TIR domain0.00030240Direct
Transducin (heterotrimeric G protein), gamma chain0.000000024070.0000000004741Direct
Trypsin-like serine proteases0.00000062660Direct
Ubiquitin-like0.23660.0000000000009644Inherited
Carbonic anhydrase0.000098580.01165Inherited
NAD(P)-linked oxidoreductase11Inherited
UBC-like0.2811Inherited
Metalloproteases ("zincins"), catalytic domain11Inherited
Galactose-binding domain-like0.015160.000000007467Inherited
Class I glutamine amidotransferase-like11Inherited
(Trans)glycosidases11Inherited
HIT-like0.5511Inherited
Gamma-glutamyl cyclotransferase-like11Inherited
Phospholipase A2, PLA20.0000048140.2639Inherited
TPR-like11Inherited
L30e-like0.52021Inherited
PX domain0.00016490.09071Inherited
SNARE fusion complex0.0014060.9828Inherited
Defensin-like0.16891Inherited
Acid proteases0.04371Inherited
RNase A-like0.00021560.007754Inherited
SNF-like0.37931Inherited
HMA, heavy metal-associated domain0.0033770.08421Inherited
Ferritin-like0.0000020080.4788Inherited
Cell cycle regulatory proteins0.0023920.02737Inherited
KRAB domain (Kruppel-associated box)0.93121Inherited
Proteasome activator0.00094620.02737Inherited
Thioredoxin-like0.64651Inherited
Activating enzymes of the ubiquitin-like proteins0.72371Inherited
Cytochrome P4500.37411Inherited
Nudix11Inherited
Cytidine deaminase-like0.14211Inherited
Aquaporin-like0.40471Inherited
Blood coagulation inhibitor (disintegrin)0.30360.6112Inherited
VHL0.00021740.00186Inherited
Concanavalin A-like lectins/glucanases0.7310.0002752Inherited
Snake toxin-like0.0055020Inherited
Nucleoside diphosphate kinase, NDK0.00021350.7547Inherited
Ammonium transporter0.00087060.643Inherited
ERO1-like0.060830.1331Inherited
N-(deoxy)ribosyltransferase-like0.015450.05051Inherited
PEBP-like0.038271Inherited
RNA-binding domain, RBD0.67580Inherited
Carbohydrate phosphatase0.63591Inherited
p53-like transcription factors0.01850Inherited
SRF-like0.033220.00000001454Inherited
YefM-like0.021890.6257Inherited
UDP-Glycosyltransferase/glycogen phosphorylase11Inherited
HAD-like11Inherited
Histone-fold0.54890.8314Inherited
FAD/NAD(P)-binding domain0.54271Inherited
Ribonuclease H-like0.10011Inherited
Metallo-dependent hydrolases0.029091Inherited
Kazal-type serine protease inhibitors0.057240.006331Inherited
Cystatin/monellin0.0064970.001454Inherited
Sec1/munc18-like (SM) proteins0.0046780.7573Inherited
Arp2/3 complex 21 kDa subunit ARPC30.075770.5268Inherited
Actin depolymerizing proteins0.00058280.001065Inherited
Arp2/3 complex subunits0.01060.07164Inherited
Tropomyosin11Inherited
Troponin coil-coiled subunits0.27420.008928Inherited
Cyclophilin-like0.058031Inherited
Clavaminate synthase-like11Inherited
FKBP-like0.030050.1943Inherited
Ankyrin repeat0.032560.001065Inherited
beta and beta-prime subunits of DNA dependent RNA-polymerase0.097651Inherited
Lysozyme-like11Inherited
Cell growth inhibitor/plasmid maintenance toxic component0.000024520.007581Inherited
Casein kinase II beta subunit0.000022190.00698Inherited
P-loop containing nucleoside triphosphate hydrolases0.0000000000000031441Inherited
Globin-like0.62041Inherited
PRTase-like0.60161Inherited
Arginase/deacetylase0.86030.000102Inherited
Calponin-homology domain, CH-domain0.095450.001075Inherited
Profilin (actin-binding protein)0.0001290.07937Inherited
Stathmin0.000016120.08797Inherited
Nucleic acid-binding proteins0.024730.8978Inherited
N-acetylmuramoyl-L-alanine amidase-like0.0015020.1487Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)11Inherited
Pentein0.17891Inherited
Phosphoglycerate mutase-like0.0072091Inherited
beta-beta-alpha zinc fingers0.0014090Inherited
ssDNA-binding transcriptional regulator domain0.0080390.05158Inherited
Ribbon-helix-helix0.041410.3319Inherited
Formate/glycerate dehydrogenase catalytic domain-like0.0039421Inherited
Cysteine proteinases0.28520.0001313Inherited
Mitochondrial carrier0.37621Inherited
Nqo5-like0.075770.9855Inherited
alpha/beta-Hydrolases11Inherited
SNARE-like11Inherited
C-type lectin-like0.0051670.00009955Inherited
Acyl-CoA N-acyltransferases (Nat)11Inherited
NAD(P)-binding Rossmann-fold domains11Inherited
ALDH-like11Inherited
Transthyretin (synonym: prealbumin)0.11250.5482Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)0.013270Inherited
(Phosphotyrosine protein) phosphatases II0.29930Inherited
RING/U-box0.28210Inherited
RelE-like0.033850.4086Inherited
Sm-like ribonucleoproteins0.7071Inherited
HMG-box0.09480Inherited
FMN-linked oxidoreductases11Inherited
Bet v1-like0.94041Inherited
Histidine-containing phosphotransfer domain, HPT domain0.00001120.001918Inherited
Nucleotide-diphospho-sugar transferases11Inherited
PDZ domain-like0.013420Inherited
LanC-like0.000066070.006359Inherited
Cupredoxins0.82591Inherited
WD40 repeat-like0.00000000000015920.3402Inherited
MFS general substrate transporter11Inherited
V-type ATP synthase subunit C0.032840.3698Inherited
Calcium-dependent phosphotriesterase0.25911Inherited
AtpF-like0.000074060.00402Inherited
GlnB-like0.24691Inherited
S-adenosyl-L-methionine-dependent methyltransferases11Inherited
eIF4e-like0.43221Inherited
PIN domain-like0.000000000066690.3134Inherited
YjgF-like0.60141Inherited
Ribosome inactivating proteins (RIP)0.010420.114Inherited
CSL zinc finger0.001290.00586Inherited
Tetrapyrrole methylase0.13821Inherited
Prefoldin0.13241Inherited
IHF-like DNA-binding proteins0.035560.3698Inherited
lambda repressor-like DNA-binding domains0.97950.00000000000161Inherited
NTF2-like11Inherited
RNI-like0.60551Inherited
L domain-like0.0039740Inherited
Radical SAM enzymes11Inherited
Cu,Zn superoxide dismutase-like0.00015180.1311Inherited
Apolipoprotein A-II0.000050530.00186Inherited
Annexin0.0000009160.2732Inherited
Lipocalins0.0000000026850.4426Inherited


Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
14-3-3 protein0.0000000000027340.00003486Direct
B56-like0.000000013410.0000001076Direct
Bcl-2 inhibitors of programmed cell death00Direct
Bee venom hyaluronidase0.000000050570.00002311Direct
CAF1-like ribonuclease0.000000037740.000001942Direct
Capz beta-1 subunit0.0000000080830.000006335Direct
Caspase catalytic domain0.00028280.000023Direct
Cell cycle arrest protein BUB30.0000000012670.00009354Direct
CheY-related0.00057340Direct
Core binding factor beta, CBF0.0000010640.00002257Direct
DNA-binding N-terminal domain of transcription activators0.00000045010.00008631Direct
Ephrin ectodomain0.00012530.00000003975Direct
Eukaryotic proteases0.000009330.000000000001449Direct
Ferritin0.0000000000000055430.000007624Direct
Fibroblast growth factors (FGF)00Direct
FIS-like00.00002686Direct
FUR-like00.0000000000004454Direct
Histamine methyltransferase0.00000012250.00003714Direct
HLH, helix-loop-helix DNA-binding domain0.0000000035190Direct
Inhibitor of apoptosis (IAP) repeat00Direct
Insulin-like0.0000036110.000000002283Direct
Interferons/interleukin-10 (IL-10)00Direct
Interleukin 8-like chemokines00Direct
Interleukin-1 (IL-1)0.0000015370.000000005344Direct
Long-chain cytokines00Direct
MarR-like transcriptional regulators0.000000003430.0000003601Direct
Metallothionein00.000000004011Direct
Nuclear receptor ligand-binding domain0.00034160Direct
Paired domain00.00000000000247Direct
Phosphorelay protein-like0.00000018510.00006753Direct
PhoU-like0.00000000001870.000001947Direct
Platelet-derived growth factor-like0.00026640Direct
Protein kinases, catalytic subunit00Direct
Regulator of G-protein signaling, RGS0.000000022230Direct
Renal dipeptidase0.00000000010590.000334Direct
Rhodopsin-like0.000000000000012870Direct
RPF-like00Direct
Serpins0.0000000000000011680.0000001332Direct
Short-chain cytokines00Direct
Spermadhesin, CUB domain00.000000002299Direct
The spindle assembly checkpoint protein mad20.0000000043940.0001501Direct
Toll/Interleukin receptor TIR domain0.0005670Direct
Transducin (heterotrimeric G protein), gamma chain0.00000024930.0000001564Direct
V set domains (antibody variable domain-like)00.0000000000001141Direct
Carbonic anhydrase0.00050570.04187Inherited
Aldo-keto reductases (NADP)11Inherited
PP1699/LP2961-like0.74561Inherited
Tetratricopeptide repeat (TPR)0.74691Inherited
UBC-related0.41451Inherited
C1 set domains (antibody constant domain-like)0.24950Inherited
Fucose binding lectin0.00000030690.01652Inherited
Thioesterases0.036660.3101Inherited
DJ-1/PfpI0.99781Inherited
HIT (HINT, histidine triad) family of protein kinase-interacting proteins0.79481Inherited
Troponin I0.36180.9816Inherited
Vertebrate phospholipase A20.0000091810.08427Inherited
PX domain0.00030080.358Inherited
SNARE fusion complex0.003261Inherited
Defensin0.000056390.6255Inherited
Arginine methyltransferase0.11340.01861Inherited
Penicillinase repressor0.00038990.007114Inherited
Extracellular domain of cell surface receptors0.032830Inherited
Pepsin-like0.009981Inherited
Ribonuclease A-like0.00084920.02481Inherited
SNF-like0.56831Inherited
HMA, heavy metal-associated domain0.0067990.2176Inherited
RING finger domain, C3HC40.10580.00000476Inherited
Cell cycle regulatory proteins0.0038620.04068Inherited
KRAB domain (Kruppel-associated box)0.9671Inherited
Cofactor-dependent phosphoglycerate mutase0.33811Inherited
Thioltransferase0.00026110.5781Inherited
Cystathionine synthase-like11Inherited
Ubiquitin activating enzymes (UBA)0.0028180.8665Inherited
MutT-like0.95291Inherited
C5 cytosine-specific DNA methylase, DCM0.045790.001496Inherited
Ornithine decarboxylase antizyme-like0.025520.00006458Inherited
Aquaporin-like0.62041Inherited
Calmodulin-like0.000027180.9483Inherited
Blood coagulation inhibitor (disintegrin)0.3760.8957Inherited
LanC-like0.000047430.002896Inherited
VHL0.00038990.002982Inherited
I set domains0.0019050Inherited
Nucleoside diphosphate kinase, NDK0.0012240.9286Inherited
Ammonium transporter0.0047980.8533Inherited
Glycerol-3-phosphate transporter0.45141Inherited
ERO1-like0.082550.1891Inherited
Forkhead DNA-binding domain0.020230Inherited
AF0104-like0.082550.1661Inherited
Transforming growth factor (TGF)-beta0.016280Inherited
N-deoxyribosyltransferase0.000026680.001246Inherited
Phosphatidylethanolamine binding protein0.0013450.9801Inherited
Canonical RBD0.73590.0000000002689Inherited
Inositol monophosphatase/fructose-1,6-bisphosphatase-like0.77291Inherited
SRF-like0.020230.000001276Inherited
UDPGT-like11Inherited
NLI interacting factor-like phosphatase0.00071780.6478Inherited
Nucleosome core histones11Inherited
Homeodomain0.0044250Inherited
Cystatins0.38631Inherited
Ovomucoid domain III-like0.11270.08078Inherited
Sec1/munc18-like (SM) proteins0.0097650.8646Inherited
Arp2/3 complex subunits0.016280.1148Inherited
Arp2/3 complex 21 kDa subunit ARPC30.10360.5997Inherited
Cofilin-like0.0030440.02936Inherited
Tropomyosin11Inherited
Cyclophilin (peptidylprolyl isomerase)0.12111Inherited
Astacin0.77450.3443Inherited
TBP-associated factors, TAFs0.0059740.001114Inherited
FKBP immunophilin/proline isomerase0.30610.5398Inherited
Fatty acid binding protein-like0.0057720.7234Inherited
ML domain0.0061530.1667Inherited
Ankyrin repeat0.19850.3652Inherited
Pyridoxal-dependent decarboxylase0.3451Inherited
beta 1,4 galactosyltransferase (b4GalT1)0.029891Inherited
Kid/PemK0.000017320.002259Inherited
PIN domain0.012440.6724Inherited
Cytochrome P4500.59581Inherited
Casein kinase II beta subunit0.000086110.01733Inherited
Globins0.58831Inherited
Phosphoribosyltransferases (PRTases)0.7811Inherited
Molybdenum cofactor biosynthesis protein MoeB11Inherited
Histone deacetylase, HDAC0.28660.0000003839Inherited
Galectin (animal S-lectin)0.051561Inherited
Calponin-homology domain, CH-domain0.052730.05546Inherited
G proteins00.00207Inherited
Ubiquitin-related0.87311Inherited
Profilin (actin-binding protein)0.00053670.1494Inherited
Capz alpha-1 subunit0.028420.2603Inherited
Stathmin0.00005340.1469Inherited
Cold shock DNA-binding domain-like0.056550.839Inherited
N-acetylmuramoyl-L-alanine amidase-like0.0036310.2999Inherited
Proteasome subunits11Inherited
Proteasome activator0.0018310.04068Inherited
GABARAP-like0.084360.8928Inherited
Dimethylarginine dimethylaminohydrolase DDAH0.0071710.09995Inherited
ArsR-like transcriptional regulators0.0019050.02884Inherited
WD40-repeat0.000024741Inherited
Ribosome anti-association factor eIF6 (aIF6)0.012420.1464Inherited
Arylsulfatase10.8341Inherited
Glutathione peroxidase-like0.93671Inherited
FAD/NAD-linked reductases, N-terminal and central domains0.042561Inherited
Classic zinc finger, C2H20.0043980.000000000003867Inherited
GreA transcript cleavage factor, C-terminal domain0.0014830.2622Inherited
Formate/glycerate dehydrogenases, substrate-binding domain0.0055930.9886Inherited
Mitochondrial carrier0.77431Inherited
Glyoxalase I (lactoylglutathione lyase)0.088231Inherited
Nqo5-like0.10360.9618Inherited
Papain-like0.015031Inherited
C-type lectin domain0.02550.005673Inherited
N-acetyl transferase, NAT11Inherited
Tyrosine-dependent oxidoreductases11Inherited
PAPS sulfotransferase11Inherited
ALDH-like11Inherited
Transthyretin (synonym: prealbumin)0.15860.6305Inherited
Penta-EF-hand proteins0.0063520.000024Inherited
Dual specificity phosphatase-like0.48590.007091Inherited
Tissue inhibitor of metalloproteinases, TIMP0.00000055090.00172Inherited
Histidine acid phosphatase0.00000025510.7443Inherited
Gonadodropin/Follitropin0.000000019210.008583Inherited
Roadblock/LC7 domain0.00000000043380.001636Inherited
S100 proteins0.000042070.09357Inherited
SGL-like0.032550.6553Inherited
Cathelicidin motif0.023460.1565Inherited
Sm motif of small nuclear ribonucleoproteins, SNRNP0.88211Inherited
APC10-like0.0021770.2341Inherited
HEAT repeat0.009460.179Inherited
Carboxylesterase11Inherited
FMN-linked oxidoreductases11Inherited
Cyclin A/CDK2-associated p19, Skp20.0018310.006453Inherited
RhoGDI-like0.0014710.06246Inherited
AtpF-like0.00016480.006363Inherited
Prokaryotic signal transducing protein0.0020920.05004Inherited
Translation initiation factor eIF4e0.57621Inherited
YjgF/L-PSP0.69571Inherited
NOL1/NOP2/sun0.045791Inherited
Pumilio repeat0.0071710.005988Inherited
Plant cytotoxins0.005510.09995Inherited
CSL zinc finger0.0019630.01104Inherited
Tetrapyrrole methylase0.20061Inherited
Prefoldin0.13571Inherited
Prokaryotic DNA-bending protein0.050230.3843Inherited
Transcriptional coactivator PC4 C-terminal domain0.0071710.07903Inherited
SH2 domain0.0015770Inherited
Cu,Zn superoxide dismutase-like0.00084860.2928Inherited
Apolipoprotein A-II0.00010220.002982Inherited
Pentraxin (pentaxin)0.40470.9162Inherited
Interleukin 17F, IL-17F0.0012820.1469Inherited
Annexin0.0000092090.5192Inherited
Retinol binding protein-like0.0000045250.2657Inherited
MoCo biosynthesis proteins0.49431Inherited


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Supra-domain (including individual superfamily)

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