SUPERFAMILY 1.75 HMM library and genome assignments server

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Biological Process (BP): phagosome maturation

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Root: GO Hierarchy Containing Three Sub-Ontologies (BP, MF, CC)

Shortest distance to current term (+ for parents, - for children) GO term [GO ID] <#Children> #High-quality
(SF|FA)
#Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   biological_process [GO:0008150] <24>
+ + + 3:   cellular component organization or biogenesis [GO:0071840] <2>(123|122) (647|619|358)
+ + + 3:   cellular process [GO:0009987] <21>(372|486) (1162|1371|744)
+ + 2:   cellular component organization [GO:0016043] <33>(113|104) (617|594|349)
+ 1:   organelle organization [GO:0006996] <27>(69|66) (402|354|191)
0:   phagosome maturation [GO:0090382] <4>(1|1) (4|4|1)
- 1:   phagolysosome assembly [GO:0001845] <3>(1|1) (4|2|0)
- 1:   phagosome maturation involved in apoptotic cell clearance [GO:0090386] <2>(0|0) (2|1|0)
- 1:   phagosome acidification [GO:0090383] <1>(0|0) (0|0|0)
- 1:   phagosome reneutralization [GO:0044655](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
P-loop containing nucleoside triphosphate hydrolases0.00000000000036720.000000000002856Direct


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Family

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
G proteins0.00000000000001080Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this GO term
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Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
P-loop containing nucleoside triphosphate hydrolases0.00000000000158Direct
PX domain0.00000005661Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.0000002478Direct
BAR/IMD domain-like0.00003993Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
64268,103657
  • 64268 - PX domain
  • 103657 - BAR/IMD domain-like
  • 0.00000000008025Direct
    49562,48371
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 48371 - ARM repeat
  • 0.0000003001Direct
    48371,56112
  • 48371 - ARM repeat
  • 56112 - Protein kinase-like (PK-like)
  • 0.0000009009Direct
    49562,49562
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 0.00001693Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    49562,48371,56112
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 48371 - ARM repeat
  • 56112 - Protein kinase-like (PK-like)
  • 0.000000217Direct


    Plot distribution on phylogenetic tree for Individual Supra-domains annotated by this GO term
    Plot tree as:   Download Newick format tree:   Browsing in Tree_gateway:
    (show help)