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Biological Process (BP): regulation of supramolecular fiber organization

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Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Root: GO Hierarchy Containing Three Sub-Ontologies (BP, MF, CC)

Shortest distance to current term (+ for parents, - for children) GO term [GO ID] <#Children> #High-quality
(SF|FA)
#Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   biological_process [GO:0008150] <24>
+ + + + 4:   biological regulation [GO:0065007] <5>(165|190) (757|933|542)
+ + + 3:   regulation of biological process [GO:0050789] <34>(155|176) (709|883|505)
+ + 2:   regulation of cellular process [GO:0050794] <58>(138|154) (661|802|451)
+ 1:   regulation of cellular component organization [GO:0051128] <52>(35|32) (311|310|174)
0:   regulation of supramolecular fiber organization [GO:1902903] <11>(8|8) (72|53|30)
- 1:   negative regulation of supramolecular fiber organization [GO:1902904] <11>(5|5) (39|22|15)
- 1:   positive regulation of supramolecular fiber organization [GO:1902905] <10>(3|4) (33|25|16)
- 1:   regulation of actin filament bundle assembly [GO:0032231] <4>(0|0) (21|16|9)
- 1:   regulation of microtubule depolymerization [GO:0031114] <3>(2|1) (10|7|4)
- 1:   regulation of microtubule polymerization [GO:0031113] <3>(1|1) (8|7|3)
- 1:   regulation of actin polymerization or depolymerization [GO:0008064] <2>(5|6) (38|29|18)
- 1:   regulation of amyloid fibril formation [GO:1905906] <2>(0|0) (1|1|1)
- 1:   regulation of cardiac myofibril assembly [GO:1905304] <2>(0|0) (0|0|0)
- 1:   regulation of collagen fibril organization [GO:1904026] <2>(0|0) (1|0|0)
- 1:   regulation of sarcomere organization [GO:0060297] <2>(0|0) (3|1|0)
- 1:   regulation of actin filament organization involved in cytokinetic actomyosin contractile ring assemb [GO:1903117] <1>(0|0) (0|0|0)


Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
Actin depolymerizing proteins0.000000027280Direct
Arp2/3 complex 21 kDa subunit ARPC30.000000000081250.000000004876Direct
Arp2/3 complex subunits0.00000000013980Direct
Calponin-homology domain, CH-domain0.000075680Direct
Profilin (actin-binding protein)0.00000000061460.000000000529Direct
Stathmin0.0000057230.000005771Direct
Subunits of heterodimeric actin filament capping protein Capz0.000000027280.000000004219Direct
EF-hand0.29450.00001152Inherited


Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (singleton)FDR (all)Annotation (direct or inherited)
Arp2/3 complex 21 kDa subunit ARPC30.00000000023420.00000000958Direct
Arp2/3 complex subunits0.00000000032550Direct
Calponin-homology domain, CH-domain0.000090090Direct
Capz alpha-1 subunit0.00000000060530.0000000006297Direct
Capz beta-1 subunit0.00013080.0001074Direct
Cofilin-like0.000000052920.000000000000005999Direct
Profilin (actin-binding protein)0.0000000011970.0000000007347Direct
Stathmin0.0000081210.000006601Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this GO term
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Jump to [ Top · GO Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
GAS2 domain-like0Direct
Plakin repeat0Direct
SH3-domain0Direct
PH domain-like0Direct
Calponin-homology domain, CH-domain0Direct
DBL homology domain (DH-domain)0Direct
EB1 dimerisation domain-like0Direct
Formin homology 2 domain (FH2 domain)0Direct
Spectrin repeat0Direct
Actin depolymerizing proteins0Direct
Arp2/3 complex subunits0Direct
BAR/IMD domain-like0.000000000001429Direct
Profilin (actin-binding protein)0.000000000308Direct
HR1 repeat0.0000000003662Direct
Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain0.0000000009255Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.000000002522Direct
Subunits of heterodimeric actin filament capping protein Capz0.000000002522Direct
Arp2/3 complex 21 kDa subunit ARPC30.00000000292Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.000000005933Direct
Cysteine-rich domain0.000000006283Direct
N-terminal coiled coil domain from apc0.00000001507Direct
Tumor suppressor gene product Apc0.00000001507Direct
Arp2/3 complex 16 kDa subunit ARPC50.00000002377Direct
VHP, Villin headpiece domain0.00000009533Direct
Cap-Gly domain0.0000003696Direct
ARM repeat0.00000119Direct
RNI-like0.000001434Direct
C-terminal, gelsolin-like domain of Sec23/240.000002943Direct
Stathmin0.000003784Direct
Lipoxigenase0.000003784Direct
DNase I-like0.000003921Direct
Actin-like ATPase domain0.000004747Direct
EF-hand0.000007629Direct
SAM/Pointed domain0.00001897Direct
Wiscott-Aldrich syndrome protein, WASP, C-terminal domain0.00002328Direct
AraD/HMP-PK domain-like0.00003326Direct
G protein-binding domain0.00004068Direct
GTPase activation domain, GAP0.00005099Direct
Lipase/lipooxygenase domain (PLAT/LH2 domain)0.0001286Direct
FF domain0.000271Direct
Thyroglobulin type-1 domain0.0002816Direct
SH2 domain0.0007317Direct
Ankyrin repeat0.01216Inherited
LDL receptor-like module0.4101Inherited
L domain-like1Inherited
Moesin tail domain0.003869Inherited
Protein kinase-like (PK-like)0.9274Inherited
cAMP-binding domain-like0.4717Inherited
Fibronectin type III1Inherited
Ras GEF0.2332Inherited
Galactose-binding domain-like0.6669Inherited
Growth factor receptor domain0.8939Inherited
ArfGap/RecO-like zinc finger0.1459Inherited
Family A G protein-coupled receptor-like0.4454Inherited
Second domain of FERM0.003284Inherited
Ubiquitin-like0.07163Inherited
PDZ domain-like0.09365Inherited
Frizzled cysteine-rich domain0.1986Inherited
Quinoprotein alcohol dehydrogenase-like0.05336Inherited
Cytochrome P4500.5619Inherited
NHL repeat0.1221Inherited
FAT domain of focal adhesion kinase0.1459Inherited
TSP-1 type 1 repeat0.2582Inherited
Plexin repeat0.4877Inherited
Sema domain0.5743Inherited
HAD-like0.834Inherited
CRAL/TRIO domain0.008553Inherited
Sec7 domain0.003423Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)0.01009Inherited
Interleukin 8-like chemokines0.3963Inherited
B-box zinc-binding domain0.01666Inherited
Cytokine0.04692Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47473,143575
  • 47473 - EF-hand
  • 143575 - GAS2 domain-like
  • 0Direct
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0Direct
    47576,143575
  • 47576 - Calponin-homology domain, CH-domain
  • 143575 - GAS2 domain-like
  • 0Direct
    103652,50729
  • 103652 - G protein-binding domain
  • 50729 - PH domain-like
  • 0Direct
    48065,50729
  • 48065 - DBL homology domain (DH-domain)
  • 50729 - PH domain-like
  • 0Direct
    47576,140612
  • 47576 - Calponin-homology domain, CH-domain
  • 140612 - EB1 dimerisation domain-like
  • 0Direct
    47576,46966
  • 47576 - Calponin-homology domain, CH-domain
  • 46966 - Spectrin repeat
  • 0Direct
    75399,46966
  • 75399 - Plakin repeat
  • 46966 - Spectrin repeat
  • 0Direct
    55753,55753
  • 55753 - Actin depolymerizing proteins
  • 55753 - Actin depolymerizing proteins
  • 0Direct
    50044,50156
  • 50044 - SH3-domain
  • 50156 - PDZ domain-like
  • 0.0000000000006842Direct
    50156,103657
  • 50156 - PDZ domain-like
  • 103657 - BAR/IMD domain-like
  • 0.000000000001438Direct
    48403,74924
  • 48403 - Ankyrin repeat
  • 74924 - Cap-Gly domain
  • 0.000000000004303Direct
    69645,69645
  • 69645 - Arp2/3 complex subunits
  • 69645 - Arp2/3 complex subunits
  • 0.00000000002327Direct
    55753,82754
  • 55753 - Actin depolymerizing proteins
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 0.000000000308Direct
    82754,55753
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 55753 - Actin depolymerizing proteins
  • 0.000000000308Direct
    100920,100934
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.0000000007884Direct
    53067,100920
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.000000005693Direct
    55550,50729
  • 55550 - SH2 domain
  • 50729 - PH domain-like
  • 0.0000001333Direct
    46785,51206
  • 46785 - "Winged helix" DNA-binding domain
  • 51206 - cAMP-binding domain-like
  • 0.000000217Direct
    103575,82895
  • 103575 - Plexin repeat
  • 82895 - TSP-1 type 1 repeat
  • 0.0000003761Direct
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.0000004025Direct
    49562,57889
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 57889 - Cysteine-rich domain
  • 0.0000009787Direct
    50044,50044
  • 50044 - SH3-domain
  • 50044 - SH3-domain
  • 0.000001657Direct
    74924,74924
  • 74924 - Cap-Gly domain
  • 74924 - Cap-Gly domain
  • 0.000002478Direct
    49723,48484
  • 49723 - Lipase/lipooxygenase domain (PLAT/LH2 domain)
  • 48484 - Lipoxigenase
  • 0.000003784Direct
    50044,55550
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.00001112Direct
    50729,57889
  • 50729 - PH domain-like
  • 57889 - Cysteine-rich domain
  • 0.00002243Direct
    49562,48350
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 48350 - GTPase activation domain, GAP
  • 0.00002744Direct
    57889,57889
  • 57889 - Cysteine-rich domain
  • 57889 - Cysteine-rich domain
  • 0.00004068Direct
    82754,82754
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 0.00004185Direct
    57889,50729
  • 57889 - Cysteine-rich domain
  • 50729 - PH domain-like
  • 0.00005614Direct
    55753,47050
  • 55753 - Actin depolymerizing proteins
  • 47050 - VHP, Villin headpiece domain
  • 0.0001382Direct
    46966,50044
  • 46966 - Spectrin repeat
  • 50044 - SH3-domain
  • 0.0004173Direct
    57424,57424
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 0.3167Inherited
    48371,101447
  • 48371 - ARM repeat
  • 101447 - Formin homology 2 domain (FH2 domain)
  • 0.0147Inherited
    47031,50729
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.006931Inherited
    47769,47769
  • 47769 - SAM/Pointed domain
  • 47769 - SAM/Pointed domain
  • 0.005217Inherited
    54236,48366
  • 54236 - Ubiquitin-like
  • 48366 - Ras GEF
  • 0.08012Inherited
    49785,57184
  • 49785 - Galactose-binding domain-like
  • 57184 - Growth factor receptor domain
  • 0.007746Inherited
    56112,47769
  • 56112 - Protein kinase-like (PK-like)
  • 47769 - SAM/Pointed domain
  • 0.01707Inherited
    57184,49265
  • 57184 - Growth factor receptor domain
  • 49265 - Fibronectin type III
  • 0.1048Inherited
    50729,57863
  • 50729 - PH domain-like
  • 57863 - ArfGap/RecO-like zinc finger
  • 0.0147Inherited
    54236,47031
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 0.002819Inherited
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.002678Inherited
    52047,52047
  • 52047 - RNI-like
  • 52047 - RNI-like
  • 0.00848Inherited
    47986,47986
  • 47986 - DEATH domain
  • 47986 - DEATH domain
  • 0.02311Inherited
    50729,56112
  • 50729 - PH domain-like
  • 56112 - Protein kinase-like (PK-like)
  • 0.3788Inherited
    82895,82895
  • 82895 - TSP-1 type 1 repeat
  • 82895 - TSP-1 type 1 repeat
  • 0.1715Inherited
    101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0.4975Inherited
    50978,50978
  • 50978 - WD40 repeat-like
  • 50978 - WD40 repeat-like
  • 0.01759Inherited
    50729,50044
  • 50729 - PH domain-like
  • 50044 - SH3-domain
  • 0.05907Inherited
    55550,50044
  • 55550 - SH2 domain
  • 50044 - SH3-domain
  • 0.005217Inherited
    50729,46785
  • 50729 - PH domain-like
  • 46785 - "Winged helix" DNA-binding domain
  • 0.001692Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    75399,46966,46966
  • 75399 - Plakin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0Direct
    103652,50729,57889
  • 103652 - G protein-binding domain
  • 50729 - PH domain-like
  • 57889 - Cysteine-rich domain
  • 0Direct
    55753,55753,55753
  • 55753 - Actin depolymerizing proteins
  • 55753 - Actin depolymerizing proteins
  • 55753 - Actin depolymerizing proteins
  • 0Direct
    48403,74924,74924
  • 48403 - Ankyrin repeat
  • 74924 - Cap-Gly domain
  • 74924 - Cap-Gly domain
  • 0Direct
    47576,46966,46966
  • 47576 - Calponin-homology domain, CH-domain
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0Direct
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0Direct
    53067,100920,100934
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.0000000007884Direct
    82754,55753,55753
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 55753 - Actin depolymerizing proteins
  • 55753 - Actin depolymerizing proteins
  • 0.0000000021Direct
    53067,53067,100920
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.000000005463Direct
    55753,82754,55753
  • 55753 - Actin depolymerizing proteins
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 55753 - Actin depolymerizing proteins
  • 0.0000001288Direct
    50044,55550,50729
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 50729 - PH domain-like
  • 0.0000001288Direct
    101912,103575,82895
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 82895 - TSP-1 type 1 repeat
  • 0.0000003761Direct
    103575,82895,82895
  • 103575 - Plexin repeat
  • 82895 - TSP-1 type 1 repeat
  • 82895 - TSP-1 type 1 repeat
  • 0.0000003761Direct
    50044,50044,55550
  • 50044 - SH3-domain
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.0000009239Direct
    49562,57889,57889
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 57889 - Cysteine-rich domain
  • 57889 - Cysteine-rich domain
  • 0.0000009787Direct
    55550,50044,55550
  • 55550 - SH2 domain
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.0000009833Direct
    55753,55753,82754
  • 55753 - Actin depolymerizing proteins
  • 55753 - Actin depolymerizing proteins
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 0.0000009833Direct
    55753,82754,82754
  • 55753 - Actin depolymerizing proteins
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 0.00004185Direct
    82754,82754,55753
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 55753 - Actin depolymerizing proteins
  • 0.00004185Direct
    55753,55753,47050
  • 55753 - Actin depolymerizing proteins
  • 55753 - Actin depolymerizing proteins
  • 47050 - VHP, Villin headpiece domain
  • 0.0001382Direct
    46966,46966,50044
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 50044 - SH3-domain
  • 0.0004173Direct
    57424,57424,57424
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 0.3167Inherited
    54236,47031,50729
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.005651Inherited
    47769,47769,47769
  • 47769 - SAM/Pointed domain
  • 47769 - SAM/Pointed domain
  • 47769 - SAM/Pointed domain
  • 0.001777Inherited
    49785,57184,49265
  • 49785 - Galactose-binding domain-like
  • 57184 - Growth factor receptor domain
  • 49265 - Fibronectin type III
  • 0.01408Inherited
    57716,57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.4411Inherited
    47031,50729,56112
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 56112 - Protein kinase-like (PK-like)
  • 0.004261Inherited
    50044,50044,50044
  • 50044 - SH3-domain
  • 50044 - SH3-domain
  • 50044 - SH3-domain
  • 0.0147Inherited
    82895,82895,82895
  • 82895 - TSP-1 type 1 repeat
  • 82895 - TSP-1 type 1 repeat
  • 82895 - TSP-1 type 1 repeat
  • 0.1459Inherited
    48065,50729,50044
  • 48065 - DBL homology domain (DH-domain)
  • 50729 - PH domain-like
  • 50044 - SH3-domain
  • 0.05907Inherited


    Plot distribution on phylogenetic tree for Individual Supra-domains annotated by this GO term
    Plot tree as:   Download Newick format tree:   Browsing in Tree_gateway:
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